Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

Science

Volumn 308, Issue 5725, 2005, Pages 1149-1154

  Cheng, Jill ^a   Kapranov, Philipp ^a   Drenkow, Jorg ^a   Dike, Sujit ^a   Brubaker, Shane ^a   Patel, Sandeep ^a   Long, Jeffrey ^a   Stern, David ^a   Tammana, Hari ^a   Helt, Gregg ^a   Sementchenko, Victor ^a   Piccolboni, Antonio ^a   Bekiranov, Stefan ^a   Bailey, Dione K ^a   Ganesh, Madhavan ^a   Ghosh, Srinka ^a   Bell, Ian ^a   Gerhard, Daniela S ^b   Gingeras, Thomas R ^a  

^a Thermo Fisher Scientific   (United States)

^b NATIONAL CANCER INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CELL LINES; GENOTYPE; HUMAN CHROMOSOMES; TRANSCRIPTION;

CELLS; MAPPING; RNA;

CHROMOSOMES;

NUCLEOTIDE; RNA;

GENETICS;

ARTICLE; CELL LINE; CHROMOSOME 13; CHROMOSOME 14; CHROMOSOME 19; CHROMOSOME 20; CHROMOSOME 6; CHROMOSOME 7; GENE EXPRESSION REGULATION; GENE MAPPING; GENE SEQUENCE; GENETIC TRANSCRIPTION; GENOTYPE; HUMAN; HUMAN CHROMOSOME; HUMAN GENOME; PHENOTYPE; POLYADENYLATION; PRIORITY JOURNAL; X CHROMOSOME; Y CHROMOSOME;

CELL LINE; CELL LINE, TUMOR; CELL NUCLEUS; CHROMOSOMES, HUMAN; CHROMOSOMES, HUMAN, PAIR 13; CHROMOSOMES, HUMAN, PAIR 14; CHROMOSOMES, HUMAN, PAIR 19; CHROMOSOMES, HUMAN, PAIR 20; CHROMOSOMES, HUMAN, PAIR 21; CHROMOSOMES, HUMAN, PAIR 22; CHROMOSOMES, HUMAN, PAIR 6; CHROMOSOMES, HUMAN, PAIR 7; CHROMOSOMES, HUMAN, X; CHROMOSOMES, HUMAN, Y; COMPUTATIONAL BIOLOGY; CYTOSOL; DNA, COMPLEMENTARY; DNA, INTERGENIC; EXONS; FEMALE; GENOME, HUMAN; HUMANS; INTRONS; MALE; MOLECULAR SEQUENCE DATA; NUCLEIC ACID AMPLIFICATION TECHNIQUES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PHYSICAL CHROMOSOME MAPPING; RNA SPLICING; RNA, MESSENGER; TRANSCRIPTION, GENETIC;

EID: 21044431735     PISSN: 00368075     EISSN: None     Source Type: Journal    
DOI: 10.1126/science.1108625     Document Type: Article

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37. The authors thank S. Cawley, C. Schaefer, and J. Manak for helpful discussions; M. Mittmann and D. Le for design of photolithographic masks; D. Bartell for software; R. Wheeler for assistance on the annotation database; H. Caley, H. Gorrell, and B. Wong for database support; J. Stevens for administrative support; and K. Kong for manuscript editing and management assistance. All sequenced transcripts have been submitted to GenBank (accession numbers: AY927468 to AY927642). The supplemental materials, feature intensity (CEL) files, graph file, transfrag, and RACE data are available at http://transcriptome.affymetrix.com/publication/transcriptome_10chromosomes and http://cgap.nci.nih.gov/Info/2005.1. Visual representations of the graph and transfrag data are available at http://genome.ucsc.edu/cgi-bin/hgTracks. This project has been funded in part with federal funds from the National Cancer Institute, National Institutes of Health, under contract N01-C0-12400, and by Affymetrix, Inc. The content of this publication does not necessarily reflect the views or policies of the Department of Health and Human Services, nor does mention of trade names, commercial products, or organizations imply endorsement by the U.S. government.