메뉴 건너뛰기




Volumn 19, Issue 7, 2005, Pages 782-787

Chromatin and RNAi factors protect the C. elegans germline against repetitive sequences

Author keywords

C. elegans; Cosuppression; Heterochromatin; Repetitive sequences; RNAi; Transcriptional gene silencing

Indexed keywords

RNA;

EID: 17044417320     PISSN: 08909369     EISSN: None     Source Type: Journal    
DOI: 10.1101/gad.332305     Document Type: Article
Times cited : (114)

References (40)
  • 1
    • 0035905766 scopus 로고    scopus 로고
    • Role for a bidentate ribonuclease in the initiation step of RNA interference
    • Bernstein, E., Caudy, A.A., Hammond, S.M., and Hannon, G.J. 2001. Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature 409: 363-366.
    • (2001) Nature , vol.409 , pp. 363-366
    • Bernstein, E.1    Caudy, A.A.2    Hammond, S.M.3    Hannon, G.J.4
  • 2
    • 13944268761 scopus 로고    scopus 로고
    • A member of the polymerase β nucleotidyltransferase superfamily is required for RNA interference in C. elegans
    • Chen, C., Simard, M.J., Tabara, H., Brownell, D.R., McCollough, J.A., and Mello, C.C. 2005. A member of the polymerase β nucleotidyltransferase superfamily is required for RNA interference in C. elegans. Curr. Biol. 15: 378-383.
    • (2005) Curr. Biol. , vol.15 , pp. 378-383
    • Chen, C.1    Simard, M.J.2    Tabara, H.3    Brownell, D.R.4    McCollough, J.A.5    Mello, C.C.6
  • 3
    • 0346361866 scopus 로고    scopus 로고
    • The EGL-13 SOX domain transcription factor affects the uterine pi cell lineages in Caenorhabditis elegans
    • Cinar, H.N., Richards, K.L., Oommen, K.S., and Newman, A.P. 2003. The EGL-13 SOX domain transcription factor affects the uterine pi cell lineages in Caenorhabditis elegans. Genetics 165: 1623-1628.
    • (2003) Genetics , vol.165 , pp. 1623-1628
    • Cinar, H.N.1    Richards, K.L.2    Oommen, K.S.3    Newman, A.P.4
  • 4
    • 0036204113 scopus 로고    scopus 로고
    • A heterochromatin protein 1 homologue in Caenorhabditis elegans acts in germline and vulval development
    • Couteau, F., Guerry, F., Muller, F., and Palladino, F. 2002. A heterochromatin protein 1 homologue in Caenorhabditis elegans acts in germline and vulval development. EMBO Rep. 3: 235-241.
    • (2002) EMBO Rep. , vol.3 , pp. 235-241
    • Couteau, F.1    Guerry, F.2    Muller, F.3    Palladino, F.4
  • 5
    • 9144224451 scopus 로고    scopus 로고
    • Processing of primary microRNAs by the Microprocessor complex
    • Denli, A.M., Tops, B.B., Plasterk, R.H., Ketting, R.F., and Hannon, G.J. 2004. Processing of primary microRNAs by the Microprocessor complex. Nature 432: 231-235.
    • (2004) Nature , vol.432 , pp. 231-235
    • Denli, A.M.1    Tops, B.B.2    Plasterk, R.H.3    Ketting, R.F.4    Hannon, G.J.5
  • 7
    • 0037007007 scopus 로고    scopus 로고
    • Using RNA interference to identify genes required for RNA interference
    • Dudley, N.R., Labbe, J.C., and Goldstein, B. 2002. Using RNA interference to identify genes required for RNA interference. Proc. Natl. Acad. Sci. 99: 4191-4196.
    • (2002) Proc. Natl. Acad. Sci. , vol.99 , pp. 4191-4196
    • Dudley, N.R.1    Labbe, J.C.2    Goldstein, B.3
  • 8
    • 0032545933 scopus 로고    scopus 로고
    • Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans
    • Fire, A., Xu, S., Montgomery, M.K., Kostas, S.A., Driver, S.E., and Mello, C.C. 1998. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 391: 806-811.
    • (1998) Nature , vol.391 , pp. 806-811
    • Fire, A.1    Xu, S.2    Montgomery, M.K.3    Kostas, S.A.4    Driver, S.E.5    Mello, C.C.6
  • 9
    • 0037150653 scopus 로고    scopus 로고
    • Regulation of the different chromatin states of autosomes and X chromosomes in the germ line of C. elegans
    • Fong, Y., Bender, L., Wang, W., and Strome, S. 2002. Regulation of the different chromatin states of autosomes and X chromosomes in the germ line of C. elegans. Science 296: 2235-2238.
    • (2002) Science , vol.296 , pp. 2235-2238
    • Fong, Y.1    Bender, L.2    Wang, W.3    Strome, S.4
  • 10
    • 0030035449 scopus 로고    scopus 로고
    • Post-transcriptional regulation of sex determination in Caenorhabditis elegans: Widespread expression of the sex-determining gene fem-1 in both sexes
    • Gaudet, J., VanderElst, I., and Spence, A.M. 1996. Post-transcriptional regulation of sex determination in Caenorhabditis elegans: Widespread expression of the sex-determining gene fem-1 in both sexes. Mol. Biol. Cell 7: 1107-1121.
    • (1996) Mol. Biol. Cell , vol.7 , pp. 1107-1121
    • Gaudet, J.1    VanderElst, I.2    Spence, A.M.3
  • 11
    • 8344240473 scopus 로고    scopus 로고
    • A link between mRNA turnover and RNA interference in Arabidopsis
    • Gazzani, S., Lawrenson, T., Woodward, C., Headon, D., and Sablowski, R. 2004. A link between mRNA turnover and RNA interference in Arabidopsis. Science 306: 1046-1048.
    • (2004) Science , vol.306 , pp. 1046-1048
    • Gazzani, S.1    Lawrenson, T.2    Woodward, C.3    Headon, D.4    Sablowski, R.5
  • 12
    • 17844364875 scopus 로고    scopus 로고
    • Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing
    • Grishok, A., Pasquinelli, A.E., Conte, D., Li, N., Parrish, S., Ha, I., Baillie, D.L., Fire, A., Ruvkun, G., and Mello, C.C. 2001. Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing. Cell 106: 23-34.
    • (2001) Cell , vol.106 , pp. 23-34
    • Grishok, A.1    Pasquinelli, A.E.2    Conte, D.3    Li, N.4    Parrish, S.5    Ha, I.6    Baillie, D.L.7    Fire, A.8    Ruvkun, G.9    Mello, C.C.10
  • 14
    • 0037422606 scopus 로고    scopus 로고
    • RNA interference machinery regulates chromosome dynamics during mitosis and meiosis in fission yeast
    • Hall, I.M., Noma, K., and Grewal, S.I. 2003. RNA interference machinery regulates chromosome dynamics during mitosis and meiosis in fission yeast. Proc. Natl. Acad. Sci. 100: 193-198.
    • (2003) Proc. Natl. Acad. Sci. , vol.100 , pp. 193-198
    • Hall, I.M.1    Noma, K.2    Grewal, S.I.3
  • 15
    • 0032935001 scopus 로고    scopus 로고
    • COG-2, a sox domain protein necessary for establishing a functional vulval-uterine connection in Caenorhabditis elegans
    • Hanna-Rose, W. and Han, M. 1999. COG-2, a sox domain protein necessary for establishing a functional vulval-uterine connection in Caenorhabditis elegans. Development 126: 169-179.
    • (1999) Development , vol.126 , pp. 169-179
    • Hanna-Rose, W.1    Han, M.2
  • 16
    • 0035033040 scopus 로고    scopus 로고
    • A single histone H1 isoform (H1.1) is essential for chromatin silencing and germline development in Caenorhabditis elegans
    • Jedrusik, M.A. and Schulze, E. 2001. A single histone H1 isoform (H1.1) is essential for chromatin silencing and germline development in Caenorhabditis elegans. Development 128: 1069-1080.
    • (2001) Development , vol.128 , pp. 1069-1080
    • Jedrusik, M.A.1    Schulze, E.2
  • 17
    • 0037965571 scopus 로고    scopus 로고
    • Telomeric position effect variegation in Saccharomyces cerevisiae by Caenorhabditis elegans linker histones suggests a mechanistic connection between germ line and telomeric silencing
    • -. 2003. Telomeric position effect variegation in Saccharomyces cerevisiae by Caenorhabditis elegans linker histones suggests a mechanistic connection between germ line and telomeric silencing. Mol. Cell. Biol. 23: 3681-3691.
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 3681-3691
  • 18
    • 0029015430 scopus 로고
    • Mutations in gld-1, a female germ cell-specific tumor suppressor gene in Caenorhabditis elegans, affect a conserved domain also found in Src-associated protein Sam68
    • Jones, A.R. and Schedl, T. 1995. Mutations in gld-1, a female germ cell-specific tumor suppressor gene in Caenorhabditis elegans, affect a conserved domain also found in Src-associated protein Sam68. Genes & Dev. 9: 1491-1504.
    • (1995) Genes & Dev. , vol.9 , pp. 1491-1504
    • Jones, A.R.1    Schedl, T.2
  • 20
    • 0032483543 scopus 로고    scopus 로고
    • PGL-1, a predicted RNA-binding component of germ granules, is essential for fertility in C. elegans
    • Kawasaki, I., Shim, Y.H., Kirchner, J., Kaminker, J., Wood, W.B., and Strome, S. 1998. PGL-1, a predicted RNA-binding component of germ granules, is essential for fertility in C. elegans. Cell 94: 635-645.
    • (1998) Cell , vol.94 , pp. 635-645
    • Kawasaki, I.1    Shim, Y.H.2    Kirchner, J.3    Kaminker, J.4    Wood, W.B.5    Strome, S.6
  • 21
    • 0031926583 scopus 로고    scopus 로고
    • Chromatin silencing and the maintenance of a functional germline in Caenorhabditis elegans
    • Kelly, W.G. and Fire, A. 1998. Chromatin silencing and the maintenance of a functional germline in Caenorhabditis elegans. Development 125: 2451-2456.
    • (1998) Development , vol.125 , pp. 2451-2456
    • Kelly, W.G.1    Fire, A.2
  • 23
    • 0034673645 scopus 로고    scopus 로고
    • A genetic link between co-suppression and RNA interference in C. elegans
    • Ketting, R.F. and Plasterk, R.H. 2000. A genetic link between co-suppression and RNA interference in C. elegans. Nature 404: 296-298.
    • (2000) Nature , vol.404 , pp. 296-298
    • Ketting, R.F.1    Plasterk, R.H.2
  • 26
    • 0025942107 scopus 로고
    • Efficient gene transfer in C. elegans: Extrachromosomal maintenance and integration of transforming sequences
    • Mello, C.C., Kramer, J.M., Stinehcomb, D., and Ambros, V. 1991. Efficient gene transfer in C. elegans: Extrachromosomal maintenance and integration of transforming sequences. EMBO J. 10: 3959-3970.
    • (1991) EMBO J. , vol.10 , pp. 3959-3970
    • Mello, C.C.1    Kramer, J.M.2    Stinehcomb, D.3    Ambros, V.4
  • 27
    • 10644221797 scopus 로고    scopus 로고
    • RITS acts in cis to promote RNA interference-mediated transcriptional and post-transcriptional silencing
    • Noma, K., Sugiyama, T., Cam, H., Verdel, A., Zofall, M., Jia, S., Moazed, D., and Grewal, S.I. 2004. RITS acts in cis to promote RNA interference- mediated transcriptional and post-transcriptional silencing. Nat. Genet. 36: 1174-1180.
    • (2004) Nat. Genet. , vol.36 , pp. 1174-1180
    • Noma, K.1    Sugiyama, T.2    Cam, H.3    Verdel, A.4    Zofall, M.5    Jia, S.6    Moazed, D.7    Grewal, S.I.8
  • 28
    • 0942279615 scopus 로고    scopus 로고
    • Heterochromatic silencing and HP1 localization in Drosophila are dependent on the RNAi machinery
    • Pal-Bhadra, M., Leibovitch, B.A., Gandhi, S.G., Rao, M., Bhadra, U., Birchler, J.A., and Elgin, S.C. 2004. Heterochromatic silencing and HP1 localization in Drosophila are dependent on the RNAi machinery. Science 303: 669-672.
    • (2004) Science , vol.303 , pp. 669-672
    • Pal-Bhadra, M.1    Leibovitch, B.A.2    Gandhi, S.G.3    Rao, M.4    Bhadra, U.5    Birchler, J.A.6    Elgin, S.C.7
  • 29
    • 0035099902 scopus 로고    scopus 로고
    • Creation of low-copy integrated transgenic lines in Caenorhabditis elegans
    • Praitis, V., Casey, E., Collar, D., and Austin, J. 2001. Creation of low-copy integrated transgenic lines in Caenorhabditis elegans. Genetics 157: 1217-1226.
    • (2001) Genetics , vol.157 , pp. 1217-1226
    • Praitis, V.1    Casey, E.2    Collar, D.3    Austin, J.4
  • 30
    • 0345306117 scopus 로고    scopus 로고
    • Transposon silencing in the Caenorhabditis elegant germ line by natural RNAi
    • Sijen, T. and Plasterk, R.H. 2003. Transposon silencing in the Caenorhabditis elegant germ line by natural RNAi. Nature 426: 310-314.
    • (2003) Nature , vol.426 , pp. 310-314
    • Sijen, T.1    Plasterk, R.H.2
  • 32
    • 3242691607 scopus 로고    scopus 로고
    • AtXRN4 degrades mRNA in Arabidopsis and its substrates include selected miRNA targets
    • Souret, F.F., Kastenmayer, J.P., and Green, P.J. 2004. AtXRN4 degrades mRNA in Arabidopsis and its substrates include selected miRNA targets. Mol. Cell 15: 173-183.
    • (2004) Mol. Cell , vol.15 , pp. 173-183
    • Souret, F.F.1    Kastenmayer, J.P.2    Green, P.J.3
  • 33
    • 0022348755 scopus 로고
    • Extrachromosomal DNA transformation of Caenorhabditis elegans
    • Stincbcomb, D.T., Shaw, J.E., Carr, S.H., and Hirsh, D. 1985. Extrachromosomal DNA transformation of Caenorhabditis elegans. Mol. Cell. Biol. 5: 3484-3496.
    • (1985) Mol. Cell. Biol. , vol.5 , pp. 3484-3496
    • Stincbcomb, D.T.1    Shaw, J.E.2    Carr, S.H.3    Hirsh, D.4
  • 34
    • 11844265935 scopus 로고    scopus 로고
    • RNA-dependent RNA polymerase is an essential component of a self-enforcing loop coupling heterochromatin assembly to siRNA production
    • Sugiyama, T., Cam, H., Verdel, A., Moazed, D., and Grewal, S.I. 2005. RNA-dependent RNA polymerase is an essential component of a self-enforcing loop coupling heterochromatin assembly to siRNA production. Proc. Natl. Acad. Sci. 102: 152-157.
    • (2005) Proc. Natl. Acad. Sci. , vol.102 , pp. 152-157
    • Sugiyama, T.1    Cam, H.2    Verdel, A.3    Moazed, D.4    Grewal, S.I.5
  • 39
    • 0037072661 scopus 로고    scopus 로고
    • Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi
    • Volpe, T.A., Kidner, C., Hall, I.M., Teng, G., Grewal, S.I., and Martienssen, R.A. 2002. Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi. Science 297; 1833-1837.
    • (2002) Science , vol.297 , pp. 1833-1837
    • Volpe, T.A.1    Kidner, C.2    Hall, I.M.3    Teng, G.4    Grewal, S.I.5    Martienssen, R.A.6
  • 40
    • 0034737298 scopus 로고    scopus 로고
    • RNAi: Double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals
    • Zamore, P.D., Tuschl, T., Sharp, P.A., and Bartel, D.P. 2000. RNAi: Double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals. Cell 101: 25-33.
    • (2000) Cell , vol.101 , pp. 25-33
    • Zamore, P.D.1    Tuschl, T.2    Sharp, P.A.3    Bartel, D.P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.