-
1
-
-
0024978552
-
Sequence microheterogeneity is generated at junctions of programmed DNA deletions in Tetrahymena thermophila
-
Austerberry, C.F., Snyder, R.O., and Yao, M.C. 1989. Sequence microheterogeneity is generated at junctions of programmed DNA deletions in Tetrahymena thermophila. Nucleic Acids Res. 17: 7263-7272.
-
(1989)
Nucleic Acids Res
, vol.17
, pp. 7263-7272
-
-
Austerberry, C.F.1
Snyder, R.O.2
Yao, M.C.3
-
2
-
-
33646923128
-
Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing
-
Bühler, M., Verdel, A., and Moazed, D. 2006. Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing. Cell 125: 873-886.
-
(2006)
Cell
, vol.125
, pp. 873-886
-
-
Bühler, M.1
Verdel, A.2
Moazed, D.3
-
3
-
-
0035872864
-
Nongenic, bidirectional transcription precedes and may promote developmental DNA deletion in Tetrahymena thermophila
-
Chalker, D.L. and Yao, M.C. 2001. Nongenic, bidirectional transcription precedes and may promote developmental DNA deletion in Tetrahymena thermophila. Genes & Dev. 15: 1287-1298.
-
(2001)
Genes & Dev
, vol.15
, pp. 1287-1298
-
-
Chalker, D.L.1
Yao, M.C.2
-
4
-
-
0029953126
-
Non-Mendelian, heritable blocks to DNA rearrangement are induced by loading the somatic nucleus of Tetrahymena thermophila with germ line-limited DNA
-
Chalker, D.L. and Yao, M.C. 1996. Non-Mendelian, heritable blocks to DNA rearrangement are induced by loading the somatic nucleus of Tetrahymena thermophila with germ line-limited DNA. Mol. Cell Biol. 16: 3658-3667.
-
(1996)
Mol. Cell Biol
, vol.16
, pp. 3658-3667
-
-
Chalker, D.L.1
Yao, M.C.2
-
5
-
-
13744251887
-
Communication between parental and developing genomes during Tetrahymena nuclear differentiation is likely mediated by homologous RNAs
-
Chalker, D.L., Fuller, P., and Yao, M.C. 2005. Communication between parental and developing genomes during Tetrahymena nuclear differentiation is likely mediated by homologous RNAs. Genetics 169: 149-160.
-
(2005)
Genetics
, vol.169
, pp. 149-160
-
-
Chalker, D.L.1
Fuller, P.2
Yao, M.C.3
-
6
-
-
0033231648
-
Parental expression of the chromodomain protein Pdd1p is required for completion of programmed DNA elimination and nuclear differentiation
-
Coyne, R.S., Nikiforov, M.A., Smothers, J.F., Allis, C.D., and Yao, M.C. 1999. Parental expression of the chromodomain protein Pdd1p is required for completion of programmed DNA elimination and nuclear differentiation. Mol. Cell 4: 865-872.
-
(1999)
Mol. Cell
, vol.4
, pp. 865-872
-
-
Coyne, R.S.1
Nikiforov, M.A.2
Smothers, J.F.3
Allis, C.D.4
Yao, M.C.5
-
7
-
-
33745051088
-
Centromeric histone H3 is essential for vegetative cell division and for DNA elimination during conjugation in Tetrahymena thermophila
-
Cui, B. and Gorovsky, M.A. 2006. Centromeric histone H3 is essential for vegetative cell division and for DNA elimination during conjugation in Tetrahymena thermophila. Mol. Cell. Biol. 26: 4499-4510.
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 4499-4510
-
-
Cui, B.1
Gorovsky, M.A.2
-
8
-
-
25844480848
-
RNA Pol II subunit Rpb7 promotes centromeric transcription and RNAi-directed chromatin silencing
-
Djupedal, I., Portoso, M., Spahr, H., Bonilla, C., Gustafsson, C.M., Allshire, R.C., and Ekwall, K. 2005. RNA Pol II subunit Rpb7 promotes centromeric transcription and RNAi-directed chromatin silencing. Genes & Dev. 19: 2301-2306.
-
(2005)
Genes & Dev
, vol.19
, pp. 2301-2306
-
-
Djupedal, I.1
Portoso, M.2
Spahr, H.3
Bonilla, C.4
Gustafsson, C.M.5
Allshire, R.C.6
Ekwall, K.7
-
9
-
-
0036550555
-
Role of histone deacetylation in developmentally programmed DNA rearrangements in Tetrahymena thermophila
-
Duharcourt, S. and Yao, M.C. 2002. Role of histone deacetylation in developmentally programmed DNA rearrangements in Tetrahymena thermophila. Eukaryot. Cell 1: 293-303.
-
(2002)
Eukaryot. Cell
, vol.1
, pp. 293-303
-
-
Duharcourt, S.1
Yao, M.C.2
-
10
-
-
33748598232
-
Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote
-
doi: 10.1371/journal.pbio.0040286
-
Eisen, J.A., Coyne, R.S., Wu, M., Wu, D., Thiagarajan, M., Wortman, J.R., Badger, J.H., Ren, Q., Amedeo, P., Jones, K.M., et al. 2006. Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote. PLoS Biol. 4: e286. doi: 10.1371/journal.pbio.0040286.
-
(2006)
PLoS Biol
, vol.4
-
-
Eisen, J.A.1
Coyne, R.S.2
Wu, M.3
Wu, D.4
Thiagarajan, M.5
Wortman, J.R.6
Badger, J.H.7
Ren, Q.8
Amedeo, P.9
Jones, K.M.10
-
11
-
-
0035863848
-
Cis-acting requirements in flanking DNA for the programmed elimination of mse2.9: A common mechanism for deletion of internal eliminated sequences from the developing macronucleus of Tetrahymena thermophila
-
Fillingham, J.S., Bruno, D., and Pearlman, R.E. 2001. Cis-acting requirements in flanking DNA for the programmed elimination of mse2.9: A common mechanism for deletion of internal eliminated sequences from the developing macronucleus of Tetrahymena thermophila. Nucleic Acids Res. 29: 488-498.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 488-498
-
-
Fillingham, J.S.1
Bruno, D.2
Pearlman, R.E.3
-
12
-
-
33845755946
-
Heterochromatin revisited
-
Grewal, S.I. and Jia, S. 2007. Heterochromatin revisited. Nat. Rev. Genet. 8: 35-46.
-
(2007)
Nat. Rev. Genet
, vol.8
, pp. 35-46
-
-
Grewal, S.I.1
Jia, S.2
-
13
-
-
0016591581
-
Isolation of micro- and macronuclei of Tetrahymena pyriformis
-
Gorovsky, M.A., Yao, M.C., Keevert, J.B., and Pleger, G.L. 1975. Isolation of micro- and macronuclei of Tetrahymena pyriformis. Methods Cell Biol. 9: 311-327.
-
(1975)
Methods Cell Biol
, vol.9
, pp. 311-327
-
-
Gorovsky, M.A.1
Yao, M.C.2
Keevert, J.B.3
Pleger, G.L.4
-
14
-
-
35748932681
-
Proteomic and functional analysis of Argonaute-containing mRNA-protein complexes in human cells
-
Höck, J., Weinmann, L., Ender, C., Rudel, S., Kremmer, E., Raabe, M., Urlaub, H., and Meister, G. 2007. Proteomic and functional analysis of Argonaute-containing mRNA-protein complexes in human cells. EMBO Rep. 8: 1052-1060.
-
(2007)
EMBO Rep
, vol.8
, pp. 1052-1060
-
-
Höck, J.1
Weinmann, L.2
Ender, C.3
Rudel, S.4
Kremmer, E.5
Raabe, M.6
Urlaub, H.7
Meister, G.8
-
15
-
-
22344434734
-
RNA polymerase II is required for RNAi-dependent heterochromatin assembly
-
Kato, H., Goto, D.B., Martienssen, R.A., Urano, T., Furukawa, K., and Murakami, Y. 2005. RNA polymerase II is required for RNAi-dependent heterochromatin assembly. Science 309: 467-469.
-
(2005)
Science
, vol.309
, pp. 467-469
-
-
Kato, H.1
Goto, D.B.2
Martienssen, R.A.3
Urano, T.4
Furukawa, K.5
Murakami, Y.6
-
16
-
-
33845655990
-
The germ line limited M element of Tetrahymena is targeted for elimination from the somatic genome by a homology-dependent mechanism
-
Kowalczyk, C.A., Anderson, A.M., Arce-Larreta, M., and Chalker, D.L. 2006. The germ line limited M element of Tetrahymena is targeted for elimination from the somatic genome by a homology-dependent mechanism. Nucleic Acids Res. 34: 5778-5789.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 5778-5789
-
-
Kowalczyk, C.A.1
Anderson, A.M.2
Arce-Larreta, M.3
Chalker, D.L.4
-
17
-
-
29944442623
-
Two classes of endogenous small RNAs in Tetrahymena thermophila
-
Lee, S.R. and Collins, K. 2006. Two classes of endogenous small RNAs in Tetrahymena thermophila. Genes & Dev. 20: 28-33.
-
(2006)
Genes & Dev
, vol.20
, pp. 28-33
-
-
Lee, S.R.1
Collins, K.2
-
18
-
-
44849120634
-
Maternal noncoding transcripts antagonize the targeting of DNA elimination by scanRNAs in Paramecium tetraurelia
-
Lepère, G., Bétermier, M., Meyer, E., and Duharcourt, S. 2008. Maternal noncoding transcripts antagonize the targeting of DNA elimination by scanRNAs in Paramecium tetraurelia. Genes & Dev. 22: 1501-1512.
-
(2008)
Genes & Dev
, vol.22
, pp. 1501-1512
-
-
Lepère, G.1
Bétermier, M.2
Meyer, E.3
Duharcourt, S.4
-
19
-
-
1242319537
-
Histone H lysine 9 methylation is required for DNA elimination in developing macronuclei in Tetrahymena
-
Liu, Y., Mochizuki, K., and Gorovsky, M.A. 2004. Histone H lysine 9 methylation is required for DNA elimination in developing macronuclei in Tetrahymena. Proc. Natl. Acad. Sci. 101: 1679-1684.
-
(2004)
Proc. Natl. Acad. Sci
, vol.101
, pp. 1679-1684
-
-
Liu, Y.1
Mochizuki, K.2
Gorovsky, M.A.3
-
20
-
-
13844306887
-
Elimination of foreign DNA during somatic differentiation in Tetrahymena thermophila shows position effect and is dosage dependent
-
Liu, Y., Song, X., Gorovsky, M.A., and Karrer, K.M. 2005. Elimination of foreign DNA during somatic differentiation in Tetrahymena thermophila shows position effect and is dosage dependent. Eukaryot. Cell 4: 421-431.
-
(2005)
Eukaryot. Cell
, vol.4
, pp. 421-431
-
-
Liu, Y.1
Song, X.2
Gorovsky, M.A.3
Karrer, K.M.4
-
21
-
-
34250735582
-
RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena
-
Liu, Y., Taverna, S.D., Muratore, T.L., Shabanowitz, J., Hunt, D.F., and Allis, C.D. 2007. RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena. Genes & Dev. 21: 1530-1545.
-
(2007)
Genes & Dev
, vol.21
, pp. 1530-1545
-
-
Liu, Y.1
Taverna, S.D.2
Muratore, T.L.3
Shabanowitz, J.4
Hunt, D.F.5
Allis, C.D.6
-
22
-
-
12344282204
-
Organization and pairing of meiotic chromosomes in the ciliate Tetrahymena thermophila
-
Loidl, J. and Scherthan, H. 2004. Organization and pairing of meiotic chromosomes in the ciliate Tetrahymena thermophila. J. Cell Sci. 117: 5791-5801.
-
(2004)
J. Cell Sci
, vol.117
, pp. 5791-5801
-
-
Loidl, J.1
Scherthan, H.2
-
23
-
-
0031961797
-
Genetic and morphological approaches for the analysis of meiotic chromosomes in yeast
-
Loidl, J., Klein, F., and Engebrecht, J. 1998. Genetic and morphological approaches for the analysis of meiotic chromosomes in yeast. Methods Cell Biol. 53: 257-285.
-
(1998)
Methods Cell Biol
, vol.53
, pp. 257-285
-
-
Loidl, J.1
Klein, F.2
Engebrecht, J.3
-
24
-
-
26444477370
-
Germ line transcripts are processed by a Dicer-like protein that is essential for developmentally programmed genome rearrangements of Tetrahymena thermophila
-
Malone, C.D., Anderson, A.M., Motl, J.A., Rexer, C.H., and Chalker, D.L. 2005. Germ line transcripts are processed by a Dicer-like protein that is essential for developmentally programmed genome rearrangements of Tetrahymena thermophila. Mol. Cell. Biol. 25: 9151-9164.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 9151-9164
-
-
Malone, C.D.1
Anderson, A.M.2
Motl, J.A.3
Rexer, C.H.4
Chalker, D.L.5
-
25
-
-
34250731410
-
RNAi and heterochromatin assembly
-
eds. C.D. Allis et al, pp, Cold Spring Habor Laboratory Press, Cold Spring Harbor, New York
-
Martienssen, R. and Moazed, D. 2006. RNAi and heterochromatin assembly In Epigenitics. (eds. C.D. Allis et al.), pp. 151-166. Cold Spring Habor Laboratory Press, Cold Spring Harbor, New York.
-
(2006)
Epigenitics
, pp. 151-166
-
-
Martienssen, R.1
Moazed, D.2
-
26
-
-
33846117170
-
Epigenetics in Ciliates
-
eds. C.D. Allis et al, pp, Cold Spring Habor Laboratory Press, Cold Spring Harbor, New York
-
Meyer, E. and Chalker, D.L. 2006. Epigenetics in Ciliates. In Epigenetics (eds. C.D. Allis et al.), pp. 127-150. Cold Spring Habor Laboratory Press, Cold Spring Harbor, New York.
-
(2006)
Epigenetics
, pp. 127-150
-
-
Meyer, E.1
Chalker, D.L.2
-
27
-
-
1942535718
-
Small RNAs in genome rearrangement in Tetrahymena
-
Mochizuki, K. and Gorovsky, M.A. 2004a. Small RNAs in genome rearrangement in Tetrahymena. Curr. Opin. Genet. Dev. 14: 181-187.
-
(2004)
Curr. Opin. Genet. Dev
, vol.14
, pp. 181-187
-
-
Mochizuki, K.1
Gorovsky, M.A.2
-
28
-
-
4444383501
-
Conjugation-specific small RNAs in Tetrahymena have predicted properties of scan (scn) RNAs involved in genome rearrangement
-
Mochizuki, K. and Gorovsky, M.A. 2004b. Conjugation-specific small RNAs in Tetrahymena have predicted properties of scan (scn) RNAs involved in genome rearrangement. Genes & Dev. 18: 2068-2073.
-
(2004)
Genes & Dev
, vol.18
, pp. 2068-2073
-
-
Mochizuki, K.1
Gorovsky, M.A.2
-
29
-
-
6344221875
-
RNA polymerase II localizes in Tetrahymena thermophila meiotic micronuclei when micronuclear transcription associated with genome rearrangement occurs
-
Mochizuki, K. and Gorovsky, M.A. 2004c. RNA polymerase II localizes in Tetrahymena thermophila meiotic micronuclei when micronuclear transcription associated with genome rearrangement occurs. Eukaryot. Cell 3: 1233-1240.
-
(2004)
Eukaryot. Cell
, vol.3
, pp. 1233-1240
-
-
Mochizuki, K.1
Gorovsky, M.A.2
-
30
-
-
11844263265
-
A Dicer-like protein in Tetrahymena has distinct functions in genome rearrangement, chromosome segregation, and meiotic prophase
-
Mochizuki, K. and Gorovsky, M.A. 2005. A Dicer-like protein in Tetrahymena has distinct functions in genome rearrangement, chromosome segregation, and meiotic prophase. Genes & Dev. 19: 77-89.
-
(2005)
Genes & Dev
, vol.19
, pp. 77-89
-
-
Mochizuki, K.1
Gorovsky, M.A.2
-
31
-
-
0037145031
-
Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in Tetrahymena
-
Mochizuki, K., Fine, N.A., Fujisawa, T., and Gorovsky, M.A. 2002. Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in Tetrahymena. Cell 110: 689-699.
-
(2002)
Cell
, vol.110
, pp. 689-699
-
-
Mochizuki, K.1
Fine, N.A.2
Fujisawa, T.3
Gorovsky, M.A.4
-
32
-
-
10944248935
-
Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs
-
Motamedi, M.R., Verdel, A., Colmenares, S.U., Gerber, S.A., Gygi, S.P., and Moazed, D. 2004. Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs. Cell 119: 789-802.
-
(2004)
Cell
, vol.119
, pp. 789-802
-
-
Motamedi, M.R.1
Verdel, A.2
Colmenares, S.U.3
Gerber, S.A.4
Gygi, S.P.5
Moazed, D.6
-
33
-
-
0032750281
-
Excision of micronuclear-specific DNA requires parental expression of pdd2p and occurs independently from DNA replication in Tetrahymena thermophila
-
Nikiforov, M.A., Smothers, J.F., Gorovsky, M.A., and Allis, C.D. 1999. Excision of micronuclear-specific DNA requires parental expression of pdd2p and occurs independently from DNA replication in Tetrahymena thermophila. Genes & Dev. 13: 2852-2862.
-
(1999)
Genes & Dev
, vol.13
, pp. 2852-2862
-
-
Nikiforov, M.A.1
Smothers, J.F.2
Gorovsky, M.A.3
Allis, C.D.4
-
34
-
-
34248576287
-
RNA helicase A interacts with RISC in human cells and functions in RISC loading
-
Robb, G.B. and Rana, T.M. 2007. RNA helicase A interacts with RISC in human cells and functions in RISC loading. Mol. Cell 26: 523-537.
-
(2007)
Mol. Cell
, vol.26
, pp. 523-537
-
-
Robb, G.B.1
Rana, T.M.2
-
35
-
-
0028157142
-
TATA-binding protein and nuclear differentiation in Tetrahymena thermophila
-
Stargell, L.A. and Gorovsky, M.A. 1994. TATA-binding protein and nuclear differentiation in Tetrahymena thermophila. Mol. Cell. Biol. 14: 723-734.
-
(1994)
Mol. Cell. Biol
, vol.14
, pp. 723-734
-
-
Stargell, L.A.1
Gorovsky, M.A.2
-
36
-
-
0016121026
-
Cytologic and autoradiographic studies of the micronucleus at meiotic prophase in Tetrahymena pyriformis
-
Sugai, T. and Hiwatashi, K. 1974. Cytologic and autoradiographic studies of the micronucleus at meiotic prophase in Tetrahymena pyriformis. J. Protozool. 21: 542-548.
-
(1974)
J. Protozool
, vol.21
, pp. 542-548
-
-
Sugai, T.1
Hiwatashi, K.2
-
37
-
-
0037145016
-
Methylation of histone h3 at lysine 9 targets programmed DNA elimination in Tetrahymena
-
Taverna, S.D., Coyne, R.S., and Allis, C.D. 2002. Methylation of histone h3 at lysine 9 targets programmed DNA elimination in Tetrahymena. Cell 110: 701-711.
-
(2002)
Cell
, vol.110
, pp. 701-711
-
-
Taverna, S.D.1
Coyne, R.S.2
Allis, C.D.3
-
38
-
-
0028086116
-
A small family of elements with long inverted repeats is located near sites of developmentally regulated DNA rearrangement in Tetrahymena thermophila
-
Wells, J.M., Ellingson, J.L., Catt, D.M., Berger, P.J., and Karrer, K.M. 1994. A small family of elements with long inverted repeats is located near sites of developmentally regulated DNA rearrangement in Tetrahymena thermophila. Mol. Cell. Biol. 14: 5939-5949.
-
(1994)
Mol. Cell. Biol
, vol.14
, pp. 5939-5949
-
-
Wells, J.M.1
Ellingson, J.L.2
Catt, D.M.3
Berger, P.J.4
Karrer, K.M.5
-
39
-
-
0001180360
-
Cytochemical studies on the problem of macronuclear subnuclei in Tetrahymena
-
Woodard, J., Kaneshiro, E., and Gorovsky, M.A. 1972. Cytochemical studies on the problem of macronuclear subnuclei in Tetrahymena. Genetics 70: 251-260.
-
(1972)
Genetics
, vol.70
, pp. 251-260
-
-
Woodard, J.1
Kaneshiro, E.2
Gorovsky, M.A.3
-
40
-
-
85158020247
-
Genomewide rearrangements of DNA in ciliates
-
eds. N. Craig et al, pp, Academic Press, New York
-
Yao, M.C., Duharcourt, S., and Chalker, D.L. 2002. Genomewide rearrangements of DNA in ciliates. In Mobile DNA II (eds. N. Craig et al.), pp. 730-758. Academic Press, New York.
-
(2002)
Mobile DNA II
, pp. 730-758
-
-
Yao, M.C.1
Duharcourt, S.2
Chalker, D.L.3
-
41
-
-
0038581529
-
Programmed DNA deletion as an RNA-guided system of genome defense
-
Yao, M.C., Fuller, P., and Xi, X. 2003. Programmed DNA deletion as an RNA-guided system of genome defense. Science 300: 1581-1584.
-
(2003)
Science
, vol.300
, pp. 1581-1584
-
-
Yao, M.C.1
Fuller, P.2
Xi, X.3
|