Optimizing the cationic conjugated polymer-sensitized fluorescent signal of dye labeled oligonucleotide for biosensor applications

Biosensors and Bioelectronics

Volumn 24, Issue 5, 2009, Pages 1067-1073

  Pu, Kan Yi ^a   Liu, Bin ^a  

^a NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

Author keywords

Biosensor; Cationic conjugated polymer; Fluorescence resonance energy transfer; Signal amplification

Indexed keywords

BIOSENSOR APPLICATIONS; CATIONIC CONJUGATED POLYMER; DETECTION SENSITIVITIES; DIRECT EXCITATIONS; DNA MOLECULES; ECONOMIC IMPORTANCES; ENERGY LEVELS; FLUORESCENCE QUENCHING; FLUORESCENCE RESONANCE ENERGY TRANSFER; FLUORESCENT SIGNALS; POLYFLUORENE DERIVATIVES; POLYNUCLEOTIDE; REAL TIMES; SELF-ASSEMBLY; SIGNAL AMPLIFICATION; SIGNAL OUTPUTS; SMALL MOLECULES; SPECTRAL OVERLAPS;

AMPLIFICATION; BIOSENSORS; CHROMOPHORES; DNA; DYES; ENERGY TRANSFER; FLUORESCENCE; GENES; NUCLEIC ACIDS; OLIGONUCLEOTIDES; ORGANIC ACIDS; PHOTORESISTS; POLYMERS; QUENCHING; RESONANCE; RNA; SIGNAL PROCESSING; SIGNAL TRANSDUCTION;

CONJUGATED POLYMERS;

DNA; FLUORENE DERIVATIVE; FLUORESCEIN; FLUORESCENT DYE; OLIGONUCLEOTIDE; POLYELECTROLYTE; POLYMER; PROTEIN; RNA; SINGLE STRANDED DNA; WATER;

ASSAY; BIOSENSOR; CHROMATOPHORE; ENERGY; EXCITATION; FLUORESCENCE; FLUORESCENCE RESONANCE ENERGY TRANSFER; PROTEIN ANALYSIS; REVIEW;

BIOSENSING TECHNIQUES; CATIONS; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; FLUORESCENCE RESONANCE ENERGY TRANSFER; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; OLIGONUCLEOTIDES; POLYMERS; QUALITY CONTROL;

EID: 58149168994     PISSN: 09565663     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bios.2008.07.029     Document Type: Review

References (56)

1. Avouris P., and Chen J. Mater. Today 9 (2006) 46-54
2. Bäuerle P., and Emge A. Adv. Mater. 10 (1998) 324-330
3. Bazan G.C. J. Org. Chem. 72 (2007) 8615-8635
4. Boon E.M., Ceres D.M., Drummond T.G., Hill M.G., and Barton J.K. Nat. Biotechnol. 18 (2000) 1096-1100
5. Brédas J.L., Beljonne D., Coropceanu V., and Cornil J. Chem. Rev. 104 (2004) 4971-5004
6. Bruchez M., Moronne M., Gin P., Weiss S., and Alivisatos A.P. Science 281 (1998) 2013-2016
7. Cardullo R.A., Agrawal S., Flores C., Zamechnik P.C., and Wolf D.E. Proc. Natl. Acad. Sci. U.S.A. 85 (1988) 8790-8794
8. Chan W.C.W., and Nie S.M. Science 281 (1998) 2016-2018
9. Chen L., McBranch D.W., Wang H., Helgeson R., Wudl F., and Whitten D. Proc. Natl. Acad. Sci. U.S.A. 96 (1999) 12287-12292
10. Dubertret B., Calame M., and Libchaber A. Nat. Biotechnol. 19 (2001) 365-370
11. Ewbank P.C., Nuding G., Suenaga H., McCullough R.D., and Shinkai S. Tetrahedron Lett. 42 (2001) 155-157
12. Fan C., Plaxco K.W., and Heeger A.J. Proc. Natl. Acad. Sci. U.S.A. 100 (2003) 9134-9137
13. Förster T. Ann. Phys. 2 (1948) 55-75
14. Gaylord B.S., Heeger A.J., and Bazan G.C. Proc. Natl. Acad. Sci. U.S.A. 99 (2002) 10954-10957
15. Gaylord B.S., Heeger A.J., and Bazan G.C. J. Am. Chem. Soc. 125 (2003) 896-900
16. Halls J.J.M., Comil J., Santos D.A., Silbey R., Hwang D.H., Holmes A.B., Brédas J.L., and Friend R.H. Phy. Rev. B 60 (1999) 5721-5727
17. Herland A., and Inganäs O. Macromol. Rapid Commun. 28 (2007) 1703-1713
18. Ho H., and Leclerc M. J. Am. Chem. Soc. 126 (2004) 1384-1387
19. Ho H., Doré K., Boissinot M., Bergeron M.G., Tanguay R.M., Boudreau D., and Leclerc M. J. Am. Chem. Soc. 127 (2005) 12673-12676
20. Kim I.B., Erdogan B., Wilson J.N., and Bunz U.H.F. Chem. Eur. J. 10 (2004) 6247-6254
21. Korri Y.H., Garnier F., Srivastava P., Godillot P., and Yassar A. J. Am. Chem. Soc. 119 (1997) 7388-7389
22. Leclerc M. Adv. Mater. 11 (1999) 1491-1498
23. Lee D.W., and Swager T.M. Synlett (2004) 149-154
24. Liu B., and Bazan G.C. Chem. Mater. 16 (2004) 4467-4476
25. Liu B., and Bazan G.C. J. Am. Chem. Soc. 126 (2004) 1942-1943
26. Liu B., and Bazan G.C. Proc. Natl. Acad. Sci. U.S.A. 102 (2005) 589-593
27. Liu B., and Bazan G.C. Nat. Protoc. 1 (2006) 1698-1702
28. Liu B., and Bazan G.C. J. Am. Chem. Soc. 128 (2006) 1188
29. Liu B., and Bazan G.C. Chem. Asian J. 2 (2007) 499-504
30. Liu B., and Dishari S.K. Chem. Eur. J. 14 (2008) 7366-7375
31. Liu B., Gaylord B.S., Wang S., and Bazan G.C. J. Am. Chem. Soc. 125 (2003) 6705-6714
32. Liu B., Wang S., Bazan G.C., and Mikhailovsky A. J. Am. Soc. Chem. 125 (2003) 13306-13307
33. Liu B., Dan T.T.T., and Bazan G.C. Adv. Funct. Mater. 17 (2007) 2432-2438
34. Mannelli I., Minunni M., Tombelli S., and Mascini M. Biosens. Bioelectron. 18 (2003) 129-140
35. McQuade D.T., Pullen A.E., and Swager T.M. Chem. Rev. 100 (2000) 2537-2574
36. Nam J.M., Thaxton C.S., and Mirkin C.A. Science 301 (2003) 1884-1886
37. Nguyen T.Q., Wu J.J., Doan V., Schwartz B.J., and Tolbert S.H. Science 288 (2000) 652-656
38. Nilsson K.P.R., and Inganäs O. Nat. Mater. 2 (2003) 419-424
39. Nuovo G.J. Methods Mol. Biol. 123 (2000) 217-238
40. Patolsky F., Lichtenstein A., and Willner I. Nat. Biotechnol. 19 (2001) 253-258
41. Pinto M.R., and Schanze K.S. Synthesis (2002) 1293-1309
42. Pinto M.R., and Schanze K.S. Proc. Natl. Acad. Sci. U.S.A. 101 (2004) 7505-7510
43. Pu K.Y., Fang Z., and Liu B. Adv. Funct. Mater. 18 (2008) 1321-1328
44. Pu K.Y., Pan Y.H., and Liu B. J. Phys. Chem. B. 112 (2008) 9295-9300
45. Sabanayagam C.R., and Lakowicz J.R. Nucleic Acid Res. 35 (2007) e13
46. Seferos D.S., Giljohann D.A., Hill H.D., Prigodich A.E., and Mirkin C.A. J. Am. Chem. Soc. 129 (2007) 15477-15479
47. Sutherland G., and Mulley J. In: Symons R.H. (Ed). In Nucleic Acid Probes (1989), CRC Press, Florida 159
48. Swager T.M. Acc. Chem. Res. 31 (1998) 201-207
49. Thomas III S.W., Joly G.D., and Swager T.M. Chem. Rev. 107 (2007) 1339-1386
50. Wang J. Nucleic Acid Res. 28 (2000) 3011-3016
51. Wang Y., and Liu B. Chem. Commun. (2007) 3553-3555
52. Xu Q.H., Gaylord B.S., Wang S., Bazan G.C., Moses D., and Heeger A.J. Proc. Natl. Acad. Sci. U.S.A. 101 (2004) 11634-12221
53. Yang C.Y., Yang H.L., and Tan W.H. J. Am. Chem. Soc. 127 (2005) 12772-12773
54. Ye Y.K., and Ju H.X. Sensors 3 (2003) 128-145
55. Zhao X.J., Tapec D.R., and Tan W.H. J. Am. Chem. Soc. 125 (2003) 11474-11475
56. Zhou Q., and Swager T.M. J. Am. Chem. Soc. 117 (1995) 12593-12602