-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul S.F., Gish W., Miller W., Myers E.W., and Lipman D.J. Basic local alignment search tool. J. Mol. Biol. 215 (1990) 403-410
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
0030614749
-
Use of a single VH family and long CDR3s in the variable region of cattle Ig heavy chains
-
Berens S.J., Wylie D.E., and Lopez O.J. Use of a single VH family and long CDR3s in the variable region of cattle Ig heavy chains. Int. Immunol. 9 (1997) 189-199
-
(1997)
Int. Immunol.
, vol.9
, pp. 189-199
-
-
Berens, S.J.1
Wylie, D.E.2
Lopez, O.J.3
-
4
-
-
0027499308
-
Passenger transgenes reveal intrinsic specificity of the antibody hypermutation mechanism: clustering, polarity, and specific hot spots
-
Betz A.G., Rada C., Pannell R., Milstein C., and Neuberger M.S. Passenger transgenes reveal intrinsic specificity of the antibody hypermutation mechanism: clustering, polarity, and specific hot spots. Proc. Natl. Acad. Sci. U.S.A. 90 (1993) 2385-2388
-
(1993)
Proc. Natl. Acad. Sci. U.S.A.
, vol.90
, pp. 2385-2388
-
-
Betz, A.G.1
Rada, C.2
Pannell, R.3
Milstein, C.4
Neuberger, M.S.5
-
5
-
-
0032038391
-
Immunoglobulin diversity, B-cell and antibody repertoire development in large farm animals
-
Butler J.E. Immunoglobulin diversity, B-cell and antibody repertoire development in large farm animals. Rev. Sci. Tech. 17 (1998) 43-70
-
(1998)
Rev. Sci. Tech.
, vol.17
, pp. 43-70
-
-
Butler, J.E.1
-
6
-
-
33749528353
-
Antibody repertoire development in fetal and neonatal piglets. XVII. IgG subclass transcription revisited with emphasis on new IgG3
-
Butler J.E., and Wertz N. Antibody repertoire development in fetal and neonatal piglets. XVII. IgG subclass transcription revisited with emphasis on new IgG3. J. Immunol. 177 (2006) 5480-5489
-
(2006)
J. Immunol.
, vol.177
, pp. 5480-5489
-
-
Butler, J.E.1
Wertz, N.2
-
7
-
-
33646882384
-
Increased negative selection impairs neonatal B cell repertoire but does not directly lead to generation of disease-associated IgM auto-antibodies
-
Cassady-Cain R.L., and Kaushik A.K. Increased negative selection impairs neonatal B cell repertoire but does not directly lead to generation of disease-associated IgM auto-antibodies. Int. Immunol. 18 (2006) 661-669
-
(2006)
Int. Immunol.
, vol.18
, pp. 661-669
-
-
Cassady-Cain, R.L.1
Kaushik, A.K.2
-
8
-
-
7444256675
-
The evolutionary and structural 'logic' of antigen receptor diversity
-
Davis M.M. The evolutionary and structural 'logic' of antigen receptor diversity. Semin. Immunol. 16 (2004) 239-243
-
(2004)
Semin. Immunol.
, vol.16
, pp. 239-243
-
-
Davis, M.M.1
-
10
-
-
0035966781
-
Evolution and the molecular basis of somatic hypermutation of antigen receptor genes
-
Diaz M., Flajnik M.F., and Klinman N. Evolution and the molecular basis of somatic hypermutation of antigen receptor genes. Philos. Trans. R. Soc. Lond. B: Biol. Sci. 356 (2001) 67-72
-
(2001)
Philos. Trans. R. Soc. Lond. B: Biol. Sci.
, vol.356
, pp. 67-72
-
-
Diaz, M.1
Flajnik, M.F.2
Klinman, N.3
-
11
-
-
0030279454
-
Bovine leucocyte adhesion deficiency: a review of a modern disease and its implications
-
Gerardi A.S. Bovine leucocyte adhesion deficiency: a review of a modern disease and its implications. Res. Vet. Sci. 61 (1996) 183-186
-
(1996)
Res. Vet. Sci.
, vol.61
, pp. 183-186
-
-
Gerardi, A.S.1
-
12
-
-
0030450401
-
Modifying the sequence of an immunoglobulin V-gene alters the resulting pattern of hypermutation
-
Goyenechea B., and Milstein C. Modifying the sequence of an immunoglobulin V-gene alters the resulting pattern of hypermutation. Proc. Natl. Acad. Sci, U.S.A. 93 (1996) 13979-13984
-
(1996)
Proc. Natl. Acad. Sci, U.S.A.
, vol.93
, pp. 13979-13984
-
-
Goyenechea, B.1
Milstein, C.2
-
13
-
-
0032031016
-
Somatic hypermutation of antibody genes: a hot spot warms up
-
Green N.S., Lin M.M., and Scharff M.D. Somatic hypermutation of antibody genes: a hot spot warms up. Bioessays 20 (1998) 227-234
-
(1998)
Bioessays
, vol.20
, pp. 227-234
-
-
Green, N.S.1
Lin, M.M.2
Scharff, M.D.3
-
14
-
-
0033971477
-
Kabat database and its applications: 30 years after the first variability plot
-
Johnson G., and Wu T.T. Kabat database and its applications: 30 years after the first variability plot. Nucleic Acids Res. 28 (2000) 214-218
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 214-218
-
-
Johnson, G.1
Wu, T.T.2
-
15
-
-
0023935405
-
Comparative analysis of natural antibody specificities among hybridomas originating from spleen and peritoneal cavity of adult NZB and BALB/c mice
-
Kaushik A., Lim A., Poncet P., Ge X.R., and Dighiero G. Comparative analysis of natural antibody specificities among hybridomas originating from spleen and peritoneal cavity of adult NZB and BALB/c mice. Scand. J. Immunol. 27 (1988) 461-471
-
(1988)
Scand. J. Immunol.
, vol.27
, pp. 461-471
-
-
Kaushik, A.1
Lim, A.2
Poncet, P.3
Ge, X.R.4
Dighiero, G.5
-
17
-
-
0026773155
-
Bovine leukocyte adhesion deficiency. Beta 2 integrin deficiency in young Holstein cattle
-
Kehrli Jr. M.E., Ackermann M.R., Shuster D.E., van derMaaten M.J., Schmalstieg F.C., Anderson D.C., and Hughes B.J. Bovine leukocyte adhesion deficiency. Beta 2 integrin deficiency in young Holstein cattle. Am. J. Pathol. 140 (1992) 1489-1492
-
(1992)
Am. J. Pathol.
, vol.140
, pp. 1489-1492
-
-
Kehrli Jr., M.E.1
Ackermann, M.R.2
Shuster, D.E.3
van derMaaten, M.J.4
Schmalstieg, F.C.5
Anderson, D.C.6
Hughes, B.J.7
-
18
-
-
0028686184
-
Antibody structure and the evolution of immunoglobulin V gene segments
-
Kirkham P.M., and Schroeder Jr. H.W. Antibody structure and the evolution of immunoglobulin V gene segments. Semin. Immunol. 6 (1994) 347-360
-
(1994)
Semin. Immunol.
, vol.6
, pp. 347-360
-
-
Kirkham, P.M.1
Schroeder Jr., H.W.2
-
19
-
-
0034663923
-
Intestinal microflora and diversification of the rabbit antibody repertoire
-
Lanning D., Sethupathi P., Rhee K.J., Zhai S.K., and Knight K.L. Intestinal microflora and diversification of the rabbit antibody repertoire. J. Immunol. 165 (2000) 2012-2019
-
(2000)
J. Immunol.
, vol.165
, pp. 2012-2019
-
-
Lanning, D.1
Sethupathi, P.2
Rhee, K.J.3
Zhai, S.K.4
Knight, K.L.5
-
20
-
-
0030992768
-
Sequence dependent hypermutation of the immunoglobulin heavy chain in cultured B cells
-
Lin M.M., Zhu M., and Scharff M.D. Sequence dependent hypermutation of the immunoglobulin heavy chain in cultured B cells. Proc. Natl. Acad. Sci. U.S.A. 94 (1997) 5284-5289
-
(1997)
Proc. Natl. Acad. Sci. U.S.A.
, vol.94
, pp. 5284-5289
-
-
Lin, M.M.1
Zhu, M.2
Scharff, M.D.3
-
21
-
-
0031596844
-
Diversification of rabbit VH genes by gene-conversion-like and hypermutation mechanisms
-
Mage R.G. Diversification of rabbit VH genes by gene-conversion-like and hypermutation mechanisms. Immunol. Rev. 162 (1998) 49-54
-
(1998)
Immunol. Rev.
, vol.162
, pp. 49-54
-
-
Mage, R.G.1
-
22
-
-
27644489367
-
Immunoglobulin gene diversification
-
Maizels N. Immunoglobulin gene diversification. Annu. Rev. Genet. 39 (2005) 23-46
-
(2005)
Annu. Rev. Genet.
, vol.39
, pp. 23-46
-
-
Maizels, N.1
-
23
-
-
2942680399
-
V(D)J recombination and the evolution of the adaptive immune system
-
Market E., and Papavasiliou F.N. V(D)J recombination and the evolution of the adaptive immune system. PLoS Biol. 1 (2003) E16
-
(2003)
PLoS Biol.
, vol.1
-
-
Market, E.1
Papavasiliou, F.N.2
-
24
-
-
0029123582
-
Allograft rejection in cattle with bovine leukocyte adhesion deficiency
-
Muller K.E., Rutten V.P., Becker C.K., Hoek A., Bernadina W.E., Wentink G.H., and Figdor C.G. Allograft rejection in cattle with bovine leukocyte adhesion deficiency. Vet. Immunol. Immunopathol. 48 (1995) 55-63
-
(1995)
Vet. Immunol. Immunopathol.
, vol.48
, pp. 55-63
-
-
Muller, K.E.1
Rutten, V.P.2
Becker, C.K.3
Hoek, A.4
Bernadina, W.E.5
Wentink, G.H.6
Figdor, C.G.7
-
25
-
-
14944366020
-
Bovine leukocyte adhesion deficiency (BLAD): a review
-
Nagahata H. Bovine leukocyte adhesion deficiency (BLAD): a review. J. Vet. Med. Sci. 66 (2004) 1475-1482
-
(2004)
J. Vet. Med. Sci.
, vol.66
, pp. 1475-1482
-
-
Nagahata, H.1
-
26
-
-
0028488838
-
Analysis of mononuclear cell functions in Holstein cattle with leukocyte adhesion deficiency
-
Nagahata H., Nochi H., Sanada Y., Tamoto K., Noda H., and Kociba G.J. Analysis of mononuclear cell functions in Holstein cattle with leukocyte adhesion deficiency. Am. J. Vet. Res. 55 (1994) 1101-1106
-
(1994)
Am. J. Vet. Res.
, vol.55
, pp. 1101-1106
-
-
Nagahata, H.1
Nochi, H.2
Sanada, Y.3
Tamoto, K.4
Noda, H.5
Kociba, G.J.6
-
27
-
-
13444259474
-
Somatic hypermutation at A. T pairs: polymerase error versus dUTP incorporation
-
Neuberger M.S., Di Noia J.M., Beale R.C., Williams G.T., Yang Z., and Rada C. Somatic hypermutation at A. T pairs: polymerase error versus dUTP incorporation. Nat. Rev. Immunol. 5 (2005) 171-178
-
(2005)
Nat. Rev. Immunol.
, vol.5
, pp. 171-178
-
-
Neuberger, M.S.1
Di Noia, J.M.2
Beale, R.C.3
Williams, G.T.4
Yang, Z.5
Rada, C.6
-
28
-
-
0031920157
-
Monitoring and interpreting the intrinsic features of somatic hypermutation
-
Neuberger M.S., Ehrenstein M.R., Klix N., Jolly C.J., Yelamos J., Rada C., and Milstein C. Monitoring and interpreting the intrinsic features of somatic hypermutation. Immunol. Rev. 162 (1998) 107-116
-
(1998)
Immunol. Rev.
, vol.162
, pp. 107-116
-
-
Neuberger, M.S.1
Ehrenstein, M.R.2
Klix, N.3
Jolly, C.J.4
Yelamos, J.5
Rada, C.6
Milstein, C.7
-
29
-
-
0042697222
-
The human antibody repertoire to infectious agents: implications for disease pathogenesis
-
Ohlin M., and Zouali M. The human antibody repertoire to infectious agents: implications for disease pathogenesis. Mol. Immunol. 40 (2003) 1-11
-
(2003)
Mol. Immunol.
, vol.40
, pp. 1-11
-
-
Ohlin, M.1
Zouali, M.2
-
30
-
-
0031469982
-
Does base composition help predispose the complementarity-determining regions of antibodies to hypermutation?
-
Padlan E.A. Does base composition help predispose the complementarity-determining regions of antibodies to hypermutation?. Mol. Immunol. 34 (1997) 765-770
-
(1997)
Mol. Immunol.
, vol.34
, pp. 765-770
-
-
Padlan, E.A.1
-
31
-
-
0030589235
-
Gene conversion contributes to Ig light chain diversity in cattle
-
Parng C.L., Hansal S., Goldsby R.A., and Osborne B.A. Gene conversion contributes to Ig light chain diversity in cattle. J. Immunol. 157 (1996) 5478-5486
-
(1996)
J. Immunol.
, vol.157
, pp. 5478-5486
-
-
Parng, C.L.1
Hansal, S.2
Goldsby, R.A.3
Osborne, B.A.4
-
32
-
-
0037926476
-
Processive AID-catalysed cytosine deamination on single-stranded DNA simulates somatic hypermutation
-
Pham P., Bransteitter R., Petruska J., and Goodman M.F. Processive AID-catalysed cytosine deamination on single-stranded DNA simulates somatic hypermutation. Nature 424 (2003) 103-107
-
(2003)
Nature
, vol.424
, pp. 103-107
-
-
Pham, P.1
Bransteitter, R.2
Petruska, J.3
Goodman, M.F.4
-
33
-
-
0035724803
-
Incorporation of long CDR3s into V domains: implications for the structural evolution of the antibody-combining site
-
Ramsland P.A., Kaushik A., Marchalonis J.J., and Edmundson A.B. Incorporation of long CDR3s into V domains: implications for the structural evolution of the antibody-combining site. Exp. Clin. Immunogenet. 18 (2001) 176-198
-
(2001)
Exp. Clin. Immunogenet.
, vol.18
, pp. 176-198
-
-
Ramsland, P.A.1
Kaushik, A.2
Marchalonis, J.J.3
Edmundson, A.B.4
-
34
-
-
0023652339
-
A hyperconversion mechanism generates the chicken light chain preimmune repertoire
-
Reynaud C.A., Anquez V., Grimal H., and Weill J.C. A hyperconversion mechanism generates the chicken light chain preimmune repertoire. Cell 48 (1987) 379-388
-
(1987)
Cell
, vol.48
, pp. 379-388
-
-
Reynaud, C.A.1
Anquez, V.2
Grimal, H.3
Weill, J.C.4
-
35
-
-
0028794835
-
Hypermutation generating the sheep immunoglobulin repertoire is an antigen-independent process
-
Reynaud C.A., Garcia C., Hein W.R., and Weill J.C. Hypermutation generating the sheep immunoglobulin repertoire is an antigen-independent process. Cell 80 (1995) 115-125
-
(1995)
Cell
, vol.80
, pp. 115-125
-
-
Reynaud, C.A.1
Garcia, C.2
Hein, W.R.3
Weill, J.C.4
-
37
-
-
0026443954
-
Somatic hypermutagenesis in immunoglobulin genes. II. Influence of neighbouring base sequences on mutagenesis
-
Rogozin I.B., and Kolchanov N.A. Somatic hypermutagenesis in immunoglobulin genes. II. Influence of neighbouring base sequences on mutagenesis. Biochim. Biophys. Acta 1171 (1992) 11-18
-
(1992)
Biochim. Biophys. Acta
, vol.1171
, pp. 11-18
-
-
Rogozin, I.B.1
Kolchanov, N.A.2
-
38
-
-
0035379581
-
Somatic mutation hotspots correlate with DNA polymerase eta error spectrum
-
Rogozin I.B., Pavlov Y.I., Bebenek K., Matsuda T., and Kunkel T.A. Somatic mutation hotspots correlate with DNA polymerase eta error spectrum. Nat. Immunol. 2 (2001) 530-536
-
(2001)
Nat. Immunol.
, vol.2
, pp. 530-536
-
-
Rogozin, I.B.1
Pavlov, Y.I.2
Bebenek, K.3
Matsuda, T.4
Kunkel, T.A.5
-
39
-
-
0032766502
-
Exceptionally long CDR3H region with multiple cysteine residues in functional bovine IgM antibodies
-
Saini S.S., Allore B., Jacobs R.M., and Kaushik A. Exceptionally long CDR3H region with multiple cysteine residues in functional bovine IgM antibodies. Eur. J. Immunol. 29 (1999) 2420-2426
-
(1999)
Eur. J. Immunol.
, vol.29
, pp. 2420-2426
-
-
Saini, S.S.1
Allore, B.2
Jacobs, R.M.3
Kaushik, A.4
-
40
-
-
0038350861
-
Bovine IgM antibodies with exceptionally long complementarity-determining region 3 of the heavy chain share unique structural properties conferring restricted VH + Vlambda pairings
-
Saini S.S., Farrugia W., Ramsland P.A., and Kaushik A.K. Bovine IgM antibodies with exceptionally long complementarity-determining region 3 of the heavy chain share unique structural properties conferring restricted VH + Vlambda pairings. Int. Immunol. 15 (2003) 845-853
-
(2003)
Int. Immunol.
, vol.15
, pp. 845-853
-
-
Saini, S.S.1
Farrugia, W.2
Ramsland, P.A.3
Kaushik, A.K.4
-
41
-
-
0030778516
-
A single predominantly expressed polymorphic immunoglobulin VH gene family, related to mammalian group, I, clan, II, is identified in cattle
-
Saini S.S., Hein W.R., and Kaushik A. A single predominantly expressed polymorphic immunoglobulin VH gene family, related to mammalian group, I, clan, II, is identified in cattle. Mol. Immunol. 34 (1997) 641-651
-
(1997)
Mol. Immunol.
, vol.34
, pp. 641-651
-
-
Saini, S.S.1
Hein, W.R.2
Kaushik, A.3
-
42
-
-
0036227682
-
Extensive CDR3H length heterogeneity exists in bovine foetal VDJ rearrangements
-
Saini S.S., and Kaushik A. Extensive CDR3H length heterogeneity exists in bovine foetal VDJ rearrangements. Scand. J. Immunol. 55 (2002) 140-148
-
(2002)
Scand. J. Immunol.
, vol.55
, pp. 140-148
-
-
Saini, S.S.1
Kaushik, A.2
-
43
-
-
0141888956
-
Ultrastructural and immunologic characteristics of mouse × cattle xenogeneic hybridomas originating from bovine leukemia virus-infected cattle
-
Saini S.S., Kaushik A., Basrur P.K., and Yamashiro S. Ultrastructural and immunologic characteristics of mouse × cattle xenogeneic hybridomas originating from bovine leukemia virus-infected cattle. Vet. Pathol. 40 (2003) 460-464
-
(2003)
Vet. Pathol.
, vol.40
, pp. 460-464
-
-
Saini, S.S.1
Kaushik, A.2
Basrur, P.K.3
Yamashiro, S.4
-
44
-
-
57749174408
-
Immunoglobulin genes and their diversification in vertebrates
-
Saini S.S., and Kaushik A. Immunoglobulin genes and their diversification in vertebrates. Curr. Trends Immunol. 4 (2003) 162-176
-
(2003)
Curr. Trends Immunol.
, vol.4
, pp. 162-176
-
-
Saini, S.S.1
Kaushik, A.2
-
45
-
-
3242888974
-
V(D)J recombination
-
Schatz D.G. V(D)J recombination. Immunol. Rev. 200 (2004) 5-11
-
(2004)
Immunol. Rev.
, vol.200
, pp. 5-11
-
-
Schatz, D.G.1
-
46
-
-
0025900034
-
Somatic hypermutation of immunoglobulin kappa may depend on sequences 3′ of C kappa and occurs on passenger transgenes
-
Sharpe M.J., Milstein C., Jarvis J.M., and Neuberger M.S. Somatic hypermutation of immunoglobulin kappa may depend on sequences 3′ of C kappa and occurs on passenger transgenes. EMBO J. 10 (1991) 2139-2145
-
(1991)
EMBO J.
, vol.10
, pp. 2139-2145
-
-
Sharpe, M.J.1
Milstein, C.2
Jarvis, J.M.3
Neuberger, M.S.4
-
47
-
-
0043198208
-
Unusually long germline DH genes contribute to large sized CDR3H in bovine antibodies
-
Shojaei F., Saini S.S., and Kaushik A.K. Unusually long germline DH genes contribute to large sized CDR3H in bovine antibodies. Mol. Immunol. 40 (2003) 61-67
-
(2003)
Mol. Immunol.
, vol.40
, pp. 61-67
-
-
Shojaei, F.1
Saini, S.S.2
Kaushik, A.K.3
-
48
-
-
0026646217
-
Identification and prevalence of a genetic defect that causes leukocyte adhesion deficiency in Holstein cattle
-
Shuster D.E., Kehrli Jr. M.E., Ackermann M.R., and Gilbert R.O. Identification and prevalence of a genetic defect that causes leukocyte adhesion deficiency in Holstein cattle. Proc. Natl. Acad. Sci. U.S.A. 89 (1992) 9225-9229
-
(1992)
Proc. Natl. Acad. Sci. U.S.A.
, vol.89
, pp. 9225-9229
-
-
Shuster, D.E.1
Kehrli Jr., M.E.2
Ackermann, M.R.3
Gilbert, R.O.4
-
49
-
-
0029076196
-
Molecular characterization of bovine V lambda regions
-
Sinclair M.C., Gilchrist J., and Aitken R. Molecular characterization of bovine V lambda regions. J. Immunol. 155 (1995) 3068-3078
-
(1995)
J. Immunol.
, vol.155
, pp. 3068-3078
-
-
Sinclair, M.C.1
Gilchrist, J.2
Aitken, R.3
-
50
-
-
0031572510
-
Bovine IgG repertoire is dominated by a single diversified VH gene family
-
Sinclair M.C., Gilchrist J., and Aitken R. Bovine IgG repertoire is dominated by a single diversified VH gene family. J. Immunol. 159 (1997) 3883-3889
-
(1997)
J. Immunol.
, vol.159
, pp. 3883-3889
-
-
Sinclair, M.C.1
Gilchrist, J.2
Aitken, R.3
|