-
1
-
-
0037393246
-
An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG II
-
Angiosperm Phylogeny Group APG II, doi:10.1046/j.1095-8339.2003. t01-1-00158.x
-
Angiosperm Phylogeny Group (APG II). 2003. An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG II. Bot. J. Linn. Soc. 141: 399-436. doi:10.1046/j.1095-8339.2003. t01-1-00158.x.
-
(2003)
Bot. J. Linn. Soc
, vol.141
, pp. 399-436
-
-
-
2
-
-
0001583342
-
To be or not to be - principles of classification and monotypic plant families
-
doi:10.2307/1223768
-
Backlund, A., and Bremer, K. 1998. To be or not to be - principles of classification and monotypic plant families. Taxon, 47: 391-400. doi:10.2307/1223768.
-
(1998)
Taxon
, vol.47
, pp. 391-400
-
-
Backlund, A.1
Bremer, K.2
-
3
-
-
0034636023
-
Phylogeny of seed plants based on all three genomic compartments: Extant gymnosperms are monophyletic and Gnetales' closest relatives are conifers
-
PMID:10760278, doi:10.1073/pnas.97.8.4092
-
Bowe, L.M., Coat, G., and dePamphilis, C.W. 2000. Phylogeny of seed plants based on all three genomic compartments: extant gymnosperms are monophyletic and Gnetales' closest relatives are conifers. Proc. Natl. Acad. Sci. U.S.A. 97: 4092-4097. doi:10.1073/pnas.97.8.4092. PMID:10760278.
-
(2000)
Proc. Natl. Acad. Sci. U.S.A
, vol.97
, pp. 4092-4097
-
-
Bowe, L.M.1
Coat, G.2
dePamphilis, C.W.3
-
4
-
-
0028042495
-
Phylogenetic relationships among the genera of Taxodiaceae and Cupressaceae: Evidence from rbcL sequences
-
doi:10.2307/2419600
-
Brunsfeld, S.J., Soltis, P.E., Soltis, D.E., Gadek, P.A., Quinn, C.J., Strenge, D.D., and Ranker, T.A. 1994. Phylogenetic relationships among the genera of Taxodiaceae and Cupressaceae: evidence from rbcL sequences. Syst. Bot. 19: 253-262. doi:10.2307/2419600.
-
(1994)
Syst. Bot
, vol.19
, pp. 253-262
-
-
Brunsfeld, S.J.1
Soltis, P.E.2
Soltis, D.E.3
Gadek, P.A.4
Quinn, C.J.5
Strenge, D.D.6
Ranker, T.A.7
-
5
-
-
10644238478
-
Phylogenetic signal in nucleotide data from seed plants: Implications for resolving the seed plant tree of life
-
doi:10.3732/ajb.91.10.1599
-
Burleigh, J.G., and Mathews, S. 2004. Phylogenetic signal in nucleotide data from seed plants: implications for resolving the seed plant tree of life. Am. J. Bot. 91: 1599-1613. doi:10.3732/ajb.91.10.1599.
-
(2004)
Am. J. Bot
, vol.91
, pp. 1599-1613
-
-
Burleigh, J.G.1
Mathews, S.2
-
6
-
-
33847243366
-
Assessing among-locus variation in the inference of seed plant phylogeny
-
doi:10.1086/509586
-
Burleigh, J.G., and Mathews, S. 2007a. Assessing among-locus variation in the inference of seed plant phylogeny. Int. J. Plant Sci. 168: 111-124. doi:10.1086/509586.
-
(2007)
Int. J. Plant Sci
, vol.168
, pp. 111-124
-
-
Burleigh, J.G.1
Mathews, S.2
-
7
-
-
33847212859
-
Assessing systematic error in the inference of seed plant phylogeny
-
doi:10.1086/509588
-
Burleigh, J.G., and Mathews, S. 2007b. Assessing systematic error in the inference of seed plant phylogeny. Int. J. Plant Sci. 168: 125-135. doi:10.1086/509588.
-
(2007)
Int. J. Plant Sci
, vol.168
, pp. 125-135
-
-
Burleigh, J.G.1
Mathews, S.2
-
8
-
-
34848884808
-
Towards a phylogenetic nomenclature of Tracheophyta
-
Cantino, P.D., Doyle, J.A., Graham, S.W., Judd, W.S., Olmstead, R.G., Soltis, D.E., Soltis, P.S., and Donoghue, M.J. 2007. Towards a phylogenetic nomenclature of Tracheophyta. Taxon, 56: 822-846.
-
(2007)
Taxon
, vol.56
, pp. 822-846
-
-
Cantino, P.D.1
Doyle, J.A.2
Graham, S.W.3
Judd, W.S.4
Olmstead, R.G.5
Soltis, D.E.6
Soltis, P.S.7
Donoghue, M.J.8
-
10
-
-
0031970791
-
Some morphological features of Wollemi Pine (Wollemia nobilis: Araucariaceae) and their comparison to cretaceous plant fossils
-
doi:10.1086/297534
-
Chambers, T.C., Drinnan, A.N., and McLoughlin, S. 1998. Some morphological features of Wollemi Pine (Wollemia nobilis: Araucariaceae) and their comparison to cretaceous plant fossils. Int. J. Plant Sci. 159: 160-171. doi:10.1086/297534.
-
(1998)
Int. J. Plant Sci
, vol.159
, pp. 160-171
-
-
Chambers, T.C.1
Drinnan, A.N.2
McLoughlin, S.3
-
11
-
-
0031012107
-
Molecular phylogeny of extant gymnosperms and seed plant evolution: Analysis of nuclear 18S rRNA sequences
-
PMID:9000754
-
Chaw, S.-M., Zharkikh, A., Sung, H.-M., Lau, T.-C., and Li, W.-H. 1997. Molecular phylogeny of extant gymnosperms and seed plant evolution: Analysis of nuclear 18S rRNA sequences. Mol. Biol. Evol. 14: 56-68. PMID:9000754.
-
(1997)
Mol. Biol. Evol
, vol.14
, pp. 56-68
-
-
Chaw, S.-M.1
Zharkikh, A.2
Sung, H.-M.3
Lau, T.-C.4
Li, W.-H.5
-
12
-
-
0034636037
-
Seed plant phylogeny inferred from all three plant genomes: Monophyly of extant gymnosperms and origin of Gnetales from conifers
-
doi:10.1073/pnas.97.8.4086
-
Chaw, S.-M., Parkinson, C.L., Cheng, Y., Vincent, T.M., and Palmer, J.D. 2000. Seed plant phylogeny inferred from all three plant genomes: monophyly of extant gymnosperms and origin of Gnetales from conifers. Proc. Natl. Acad. Sci. U.S.A. 97: 4086-4091. doi:10.1073/pnas.97.8.4086.
-
(2000)
Proc. Natl. Acad. Sci. U.S.A
, vol.97
, pp. 4086-4091
-
-
Chaw, S.-M.1
Parkinson, C.L.2
Cheng, Y.3
Vincent, T.M.4
Palmer, J.D.5
-
13
-
-
0034115566
-
Phylogeny of Taxaceae and Cephalotaxaceae genera inferred from chloroplast matK gene and nuclear rDNA ITS region
-
PMID:10712841, doi:10.1006/mpev.1999.0710
-
Cheng, Y., Nicolson, R.G., Tripp, K., and Chaw, S.-M. 2000. Phylogeny of Taxaceae and Cephalotaxaceae genera inferred from chloroplast matK gene and nuclear rDNA ITS region. Mol. Phylogenet. Evol. 14: 353-365. doi:10.1006/mpev.1999.0710. PMID:10712841.
-
(2000)
Mol. Phylogenet. Evol
, vol.14
, pp. 353-365
-
-
Cheng, Y.1
Nicolson, R.G.2
Tripp, K.3
Chaw, S.-M.4
-
14
-
-
0034494062
-
Generic relationships within and between the gymnosperm families Podocarpaceae and Phyllocladaceae based on an analysis of the chloroplast gene rbcL
-
doi:10.1071/BT99062
-
Conran, J.G., Wood, G.M., Martin, P.G., Dowd, J.M., Quinn, C.J., Gadek, P.A., and Price, R.A. 2000. Generic relationships within and between the gymnosperm families Podocarpaceae and Phyllocladaceae based on an analysis of the chloroplast gene rbcL. Aust. J. Bot. 48: 715-724. doi:10.1071/BT99062.
-
(2000)
Aust. J. Bot
, vol.48
, pp. 715-724
-
-
Conran, J.G.1
Wood, G.M.2
Martin, P.G.3
Dowd, J.M.4
Quinn, C.J.5
Gadek, P.A.6
Price, R.A.7
-
15
-
-
0034628615
-
Seed plant phylogeny: Demise of the anthophyte hypothesis?
-
PMID:10679315, doi:10.1016/S0960- 9822(00)00304-3
-
Donoghue, M.J., and Doyle, J.A. 2000. Seed plant phylogeny: demise of the anthophyte hypothesis? Curr. Biol. 10: R106-R109. doi:10.1016/S0960- 9822(00)00304-3. PMID:10679315.
-
(2000)
Curr. Biol
, vol.10
-
-
Donoghue, M.J.1
Doyle, J.A.2
-
16
-
-
0032411093
-
Phylogeny of vascular plants
-
doi:10.1146/annurev.ecolsys.29.1.567
-
Doyle, J.A. 1998. Phylogeny of vascular plants. Annu. Rev. Ecol. Syst. 29: 567-599. doi:10.1146/annurev.ecolsys.29.1.567.
-
(1998)
Annu. Rev. Ecol. Syst
, vol.29
, pp. 567-599
-
-
Doyle, J.A.1
-
17
-
-
33646727380
-
Seed ferns and the origin of angiosperms
-
Doyle, J.A. 2005. Seed ferns and the origin of angiosperms. J. Torrey Bot. Soc. 133: 169-209.
-
(2005)
J. Torrey Bot. Soc
, vol.133
, pp. 169-209
-
-
Doyle, J.A.1
-
18
-
-
0002594984
-
A rapid isolation procedure for small quantities of fresh leaf tissue
-
Doyle, J.J., and Doyle, J.L. 1987. A rapid isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19: 11-15.
-
(1987)
Phytochem. Bull
, vol.19
, pp. 11-15
-
-
Doyle, J.J.1
Doyle, J.L.2
-
19
-
-
0000711372
-
Re-evaluation of Cupressaceae and Taxodiaceae: A proposed merger
-
Eckenwalder, J.E. 1976. Re-evaluation of Cupressaceae and Taxodiaceae: A proposed merger. Madrono, 23: 237-256.
-
(1976)
Madrono
, vol.23
, pp. 237-256
-
-
Eckenwalder, J.E.1
-
20
-
-
0004191134
-
-
Enright, N.J, and Hill, R.S, Editors, Smithsonian Institution Press, Washington, D.C
-
Enright, N.J., and Hill, R.S. (Editors). 1995. Ecology of the southern conifers. Smithsonian Institution Press, Washington, D.C.
-
(1995)
Ecology of the southern conifers
-
-
-
21
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
doi:10.2307/2408678
-
Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution, 39: 783-791. doi:10.2307/2408678.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
22
-
-
0001567170
-
Evolution in cordaites and conifers
-
Florin, R. 1951. Evolution in cordaites and conifers. Acta Horti Bergiani, 15: 285-388.
-
(1951)
Acta Horti Bergiani
, vol.15
, pp. 285-388
-
-
Florin, R.1
-
23
-
-
0033926891
-
Relationships within Cupressaceae sensu lato: A combined morphological and molecular approach
-
PMID:10898782, doi:10.2307/2657004
-
Gadek, P.A., Alpers, D.L., Heslewood, M.M., and Quinn, C.J. 2000. Relationships within Cupressaceae sensu lato: A combined morphological and molecular approach. Am. J. Bot. 87: 1044-1057. doi:10.2307/2657004. PMID:10898782.
-
(2000)
Am. J. Bot
, vol.87
, pp. 1044-1057
-
-
Gadek, P.A.1
Alpers, D.L.2
Heslewood, M.M.3
Quinn, C.J.4
-
24
-
-
0000989896
-
Relationships of the Wollemi Pine (Wollemia nobilis) and a molecular phylogeny of the Araucariaceae
-
Gilmore, S., and Hill, K.D. 1997. Relationships of the Wollemi Pine (Wollemia nobilis) and a molecular phylogeny of the Araucariaceae. Telopea (Syd.), 7: 275-291.
-
(1997)
Telopea (Syd.)
, vol.7
, pp. 275-291
-
-
Gilmore, S.1
Hill, K.D.2
-
25
-
-
0033666273
-
Utility of 17 chloroplast genes for inferring the phylogeny of the basal angiosperms
-
PMID:11080123, doi:10.2307/2656749
-
Graham, S.W., and Olmstead, R.G. 2000a. Utility of 17 chloroplast genes for inferring the phylogeny of the basal angiosperms. Am. J. Bot. 87: 1712-1730. doi:10.2307/2656749. PMID:11080123.
-
(2000)
Am. J. Bot
, vol.87
, pp. 1712-1730
-
-
Graham, S.W.1
Olmstead, R.G.2
-
26
-
-
0034030879
-
Evolutionary significance of an unusual chloroplast DNA inversion found in two basal angiosperm lineages
-
PMID:10794175, doi:10.1007/s002940050517
-
Graham, S.W., and Olmstead, R.G. 2000b. Evolutionary significance of an unusual chloroplast DNA inversion found in two basal angiosperm lineages. Curr. Genet. 37: 183-188. doi:10.1007/s002940050517. PMID:10794175.
-
(2000)
Curr. Genet
, vol.37
, pp. 183-188
-
-
Graham, S.W.1
Olmstead, R.G.2
-
27
-
-
0032226179
-
Phylogenetic congruence and discordance among one morphological and three molecular data sets from Pontederiaceae
-
PMID:12066301, doi:10.1080/106351598260572
-
Graham, S.W., Kohn, J.R., Morton, B.R., Eckenwalder, J.E., and Barrett, S.C.H. 1998. Phylogenetic congruence and discordance among one morphological and three molecular data sets from Pontederiaceae. Syst. Biol. 47: 545-567. doi:10.1080/106351598260572. PMID:12066301.
-
(1998)
Syst. Biol
, vol.47
, pp. 545-567
-
-
Graham, S.W.1
Kohn, J.R.2
Morton, B.R.3
Eckenwalder, J.E.4
Barrett, S.C.H.5
-
28
-
-
0033679542
-
Microstructural changes in noncoding chloroplast DNA: Interpretation, evolution, and utility of indels and inversions in basal angiosperm phylogenetic inference
-
doi:10.1086/317583
-
Graham, S.W., Reeves, P.A., Burns, A.C.E., and Olmstead, R.G. 2000. Microstructural changes in noncoding chloroplast DNA: interpretation, evolution, and utility of indels and inversions in basal angiosperm phylogenetic inference. Int. J. Plant Sci. 161: S83-S96. doi:10.1086/317583.
-
(2000)
Int. J. Plant Sci
, vol.161
-
-
Graham, S.W.1
Reeves, P.A.2
Burns, A.C.E.3
Olmstead, R.G.4
-
29
-
-
47649116059
-
-
Graham, S.W., Zgurski, J.M., McPherson, M.A., Cherniawski, D.M., Saarela, J.M., Horne, E.F.C., Smith, S.Y., Wong, W.A., O'Brien, H.E., Biron, V.L., Pires, J.C., Olmstead, R.G., Chase, M.W., and Rai, H.S. 2006. Robust inference of monocot deep phylogeny using an expanded multigene plastid data set. In Monocots: comparative biology and evolution (excluding Poales) Edited by J.T. Columbus, E.A. Friar, J.M. Porter, L.M. Prince, and M.G. Simpson. Rancho Santa Ana Botanic Garden, Claremont, Calif. pp. 3-21.
-
Graham, S.W., Zgurski, J.M., McPherson, M.A., Cherniawski, D.M., Saarela, J.M., Horne, E.F.C., Smith, S.Y., Wong, W.A., O'Brien, H.E., Biron, V.L., Pires, J.C., Olmstead, R.G., Chase, M.W., and Rai, H.S. 2006. Robust inference of monocot deep phylogeny using an expanded multigene plastid data set. In Monocots: comparative biology and evolution (excluding Poales) Edited by J.T. Columbus, E.A. Friar, J.M. Porter, L.M. Prince, and M.G. Simpson. Rancho Santa Ana Botanic Garden, Claremont, Calif. pp. 3-21.
-
-
-
-
30
-
-
0035197346
-
The evolutionary split of Pinaceae from other conifers: Evidence from an intron loss and a multigene phylogeny
-
PMID:11697913, doi:10.1006/mpev.2001.1004
-
Gugerli, F., Sperisen, C., Büchler, U., Brunner, I., Brodbeck, S., Palmer, J.D., and Qui, Y.-L. 2001. The evolutionary split of Pinaceae from other conifers: evidence from an intron loss and a multigene phylogeny. Mol. Phylogenet. Evol. 21: 167-175. doi:10.1006/mpev.2001.1004. PMID:11697913.
-
(2001)
Mol. Phylogenet. Evol
, vol.21
, pp. 167-175
-
-
Gugerli, F.1
Sperisen, C.2
Büchler, U.3
Brunner, I.4
Brodbeck, S.5
Palmer, J.D.6
Qui, Y.-L.7
-
31
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
PMID:14530136, doi:10.1080/10635150390235520
-
Guindon, S., and Gascuel, O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52: 696-704. doi:10.1080/10635150390235520. PMID:14530136.
-
(2003)
Syst. Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
32
-
-
0000630987
-
A cladistic analysis of conifers: Preliminary results
-
Hart, J.A. 1987. A cladistic analysis of conifers: preliminary results. J. Arnold Arbor. Harv. Univ. 68: 269-307.
-
(1987)
J. Arnold Arbor. Harv. Univ
, vol.68
, pp. 269-307
-
-
Hart, J.A.1
-
33
-
-
47649125195
-
Taxonomic sampling, phylogenetic accuracy, and investigator bias
-
doi:10.2307/2992540
-
Hillis, D. 1998. Taxonomic sampling, phylogenetic accuracy, and investigator bias. Syst. Biol. 42: 182-192. doi:10.2307/2992540.
-
(1998)
Syst. Biol
, vol.42
, pp. 182-192
-
-
Hillis, D.1
-
34
-
-
0033926313
-
Achieving practical outcomes from genetic studies of rare plants
-
doi:10.1071/BT98080
-
Hogbin, P.M., Peakall, R., and Sydes, M.A. 2000. Achieving practical outcomes from genetic studies of rare plants. Aust. J. Bot. 48: 375-382. doi:10.1071/BT98080.
-
(2000)
Aust. J. Bot
, vol.48
, pp. 375-382
-
-
Hogbin, P.M.1
Peakall, R.2
Sydes, M.A.3
-
35
-
-
0000935282
-
Wollemia nobilis, a new living Australian genus and species in the Araucariaceae
-
Jones, W.G., Hill, K.D., and Allen, J.M. 1995. Wollemia nobilis, a new living Australian genus and species in the Araucariaceae. Telopea (Syd.), 6: 173-176.
-
(1995)
Telopea (Syd.)
, vol.6
, pp. 173-176
-
-
Jones, W.G.1
Hill, K.D.2
Allen, J.M.3
-
36
-
-
0034117358
-
Dotlet: Diagonal plots in a web browser
-
doi:10.1093/bioinformatics/16.2.178
-
Junier, T., and Pagni, M. 2000. Dotlet: diagonal plots in a web browser. Bioinformatics, 16: 178-179. doi:10.1093/bioinformatics/16.2.178.
-
(2000)
Bioinformatics
, vol.16
, pp. 178-179
-
-
Junier, T.1
Pagni, M.2
-
37
-
-
0030842013
-
The phylogeny of the Podocarpaceae based on morphological evidence
-
doi:10.2307/2419680
-
Kelch, D.G. 1997. The phylogeny of the Podocarpaceae based on morphological evidence. Syst. Bot. 22: 113-131. doi:10.2307/2419680.
-
(1997)
Syst. Bot
, vol.22
, pp. 113-131
-
-
Kelch, D.G.1
-
38
-
-
0032229147
-
Phylogeny of Podocarpaceae: Comparison of evidence from morphology and 18S rDNA
-
doi:10.2307/2446365
-
Kelch, D.G. 1998. Phylogeny of Podocarpaceae: comparison of evidence from morphology and 18S rDNA. Am. J. Bot. 85: 986-996. doi:10.2307/2446365.
-
(1998)
Am. J. Bot
, vol.85
, pp. 986-996
-
-
Kelch, D.G.1
-
39
-
-
0001642196
-
Onthe family Phyllocladaceae
-
Keng, H. 1973.Onthe family Phyllocladaceae. Taiwania, 18: 142-145.
-
(1973)
Taiwania
, vol.18
, pp. 142-145
-
-
Keng, H.1
-
40
-
-
0001347901
-
The genus Phyllocladus (Phyllocladaceae)
-
Keng, H. 1978. The genus Phyllocladus (Phyllocladaceae). J. Arnold. Arbor. Harv. Univ. 59: 249-273.
-
(1978)
J. Arnold. Arbor. Harv. Univ
, vol.59
, pp. 249-273
-
-
Keng, H.1
-
41
-
-
15844406550
-
Hy-Phy: Hypothesis testing using phylogenies
-
PMID:15509596, doi:10.1093/bioinformatics/bti079
-
Kosakovsky Pond, S.L., Frost, S.D.W., and Muse, S.V. 2005. Hy-Phy: hypothesis testing using phylogenies. Bioinformatics, 21: 676-679. doi:10.1093/bioinformatics/bti079. PMID:15509596.
-
(2005)
Bioinformatics
, vol.21
, pp. 676-679
-
-
Kosakovsky Pond, S.L.1
Frost, S.D.W.2
Muse, S.V.3
-
42
-
-
0033755362
-
Phylogenetic relationships in Taxodiaceae and Cupressaceae sensu stricto based on matK gene, chlL gene, trnL-trnF IGS region, and trnL intron sequences
-
PMID:11034923, doi:10.2307/2656874
-
Kusumi, J., Tsumura, Y., Yoshimaru, H., and Tachida, H. 2000. Phylogenetic relationships in Taxodiaceae and Cupressaceae sensu stricto based on matK gene, chlL gene, trnL-trnF IGS region, and trnL intron sequences. Am. J. Bot. 87: 1480-1488. doi:10.2307/2656874. PMID:11034923.
-
(2000)
Am. J. Bot
, vol.87
, pp. 1480-1488
-
-
Kusumi, J.1
Tsumura, Y.2
Yoshimaru, H.3
Tachida, H.4
-
43
-
-
24744449757
-
Identifying the basal angiosperm node in chloroplast genome phylogenies: Sampling one's way out of the Felsenstein zone
-
PMID:15944438, doi:10.1093/molbev/msi191
-
Leebens-Mack, J., Raubeson, L.A., Cui, L., Kuehl, J.V., Fourcade, M.H., Chumley, T.W., Boore, J.L., Jansen, R.K., and dePamphilis, C.W. 2005. Identifying the basal angiosperm node in chloroplast genome phylogenies: sampling one's way out of the Felsenstein zone. Mol. Biol. Evol. 22: 1948-1963. doi:10.1093/molbev/msi191. PMID:15944438.
-
(2005)
Mol. Biol. Evol
, vol.22
, pp. 1948-1963
-
-
Leebens-Mack, J.1
Raubeson, L.A.2
Cui, L.3
Kuehl, J.V.4
Fourcade, M.H.5
Chumley, T.W.6
Boore, J.L.7
Jansen, R.K.8
dePamphilis, C.W.9
-
44
-
-
0001741303
-
Implications of fossil conifers for the phylogenetic relationships of living families
-
Miller, N.M., Jr. 1999. Implications of fossil conifers for the phylogenetic relationships of living families. Bot. Rev. 65: 239-277.
-
(1999)
Bot. Rev
, vol.65
, pp. 239-277
-
-
Miller Jr., N.M.1
-
45
-
-
3042761425
-
Morphogenesis of the reproductive shoots of Welwitschia mirabilis and Ephedra distachya (Gnetales), and its evolutionary implications
-
doi:10.1016/j.ode.2004.01.002
-
Mundry, M., and Stützel, T. 2004. Morphogenesis of the reproductive shoots of Welwitschia mirabilis and Ephedra distachya (Gnetales), and its evolutionary implications. Org. Divers. Evol. 4: 91-108. doi:10.1016/j.ode.2004.01.002.
-
(2004)
Org. Divers. Evol
, vol.4
, pp. 91-108
-
-
Mundry, M.1
Stützel, T.2
-
46
-
-
0001329538
-
Patterns of sequence evolution and implications for parsimony analysis of chloroplast DNA
-
Edited by P.S. Soltis, D.E. Soltis, and J.J. Doyle. Kluwer, Boston, Mass. pp
-
Olmstead, R.G., Reeves, P.A., and Yen, A.C. 1998. Patterns of sequence evolution and implications for parsimony analysis of chloroplast DNA. In Molecular systematics of plants II: DNA sequencing. Edited by P.S. Soltis, D.E. Soltis, and J.J. Doyle. Kluwer, Boston, Mass. pp. 164-187.
-
(1998)
Molecular systematics of plants II: DNA sequencing
, pp. 164-187
-
-
Olmstead, R.G.1
Reeves, P.A.2
Yen, A.C.3
-
47
-
-
0001466844
-
Phyllocladaceae
-
Edited by K.U. Kramer and P.S. Green. Springer-Verlag, Berlin, Germany. pp
-
Page, C.N. 1990a. Phyllocladaceae. In The families and genera of vascular plants Vol. 1. Edited by K.U. Kramer and P.S. Green. Springer-Verlag, Berlin, Germany. pp. 317-319.
-
(1990)
The families and genera of vascular plants
, vol.1
, pp. 317-319
-
-
Page, C.N.1
-
48
-
-
0001251514
-
Podocarpaceae
-
Edited by K.U. Kramer and P.S. Green. Springer-Verlag, Berlin, Germany. pp
-
Page, C.N. 1990b. Podocarpaceae. In The families and genera of vascular plants Vol. 1. Edited by K.U. Kramer and P.S. Green. Springer-Verlag, Berlin, Germany. pp. 332-346.
-
(1990)
The families and genera of vascular plants
, vol.1
, pp. 332-346
-
-
Page, C.N.1
-
49
-
-
47649111499
-
Sciadopityaceae
-
Edited by K.U. Kramer and P.S. Green. Springer-Verlag, Berlin, Germany. pp
-
Page, C.N. 1990c. Sciadopityaceae. In The families and genera of vascular plants Vol. 1. Edited by K.U. Kramer and P.S. Green. Springer-Verlag, Berlin, Germany. pp. 346-348.
-
(1990)
The families and genera of vascular plants
, vol.1
, pp. 346-348
-
-
Page, C.N.1
-
50
-
-
0344225044
-
Taxaceae
-
Edited by K.U. Kramer and P.S. Green. Springer-Verlag, Berlin, Germany. pp
-
Page, C.N. 1990d. Taxaceae. In The families and genera of vascular plants Vol. 1. Edited by K.U. Kramer and P.S. Green. Springer-Verlag, Berlin, Germany. pp. 346-353.
-
(1990)
The families and genera of vascular plants
, vol.1
, pp. 346-353
-
-
Page, C.N.1
-
51
-
-
0041373872
-
Comparative genetic study confirms exceptionally low genetic variation in the ancient and endangered relictual conifer, Wollemia nobilis (Araucariaceae)
-
PMID:12919472, doi:10.1046/j.1365-294X.2003. 01926.x
-
Peakall, R., Ebert, D., Scott, L., Meagher, P., and Offord, C. 2003. Comparative genetic study confirms exceptionally low genetic variation in the ancient and endangered relictual conifer, Wollemia nobilis (Araucariaceae). Mol. Ecol. 12: 2331-2343. doi:10.1046/j.1365-294X.2003. 01926.x. PMID:12919472.
-
(2003)
Mol. Ecol
, vol.12
, pp. 2331-2343
-
-
Peakall, R.1
Ebert, D.2
Scott, L.3
Meagher, P.4
Offord, C.5
-
52
-
-
0001645376
-
Coniferae
-
2nd ed. Edited by A. Engler and K. Prantl. W. Engelmann, Leipzig, Germany. pp
-
Pilger, R. 1926. Coniferae. In Die Natürlichen Pflanzenfamilien. 2nd ed. Edited by A. Engler and K. Prantl. W. Engelmann, Leipzig, Germany. pp. 121-407.
-
(1926)
Die Natürlichen Pflanzenfamilien
, pp. 121-407
-
-
Pilger, R.1
-
53
-
-
0031773680
-
Modeltest: Testing the model of DNA substitution
-
PMID:9918953, doi:10.1093/bioinformatics/14. 9.817
-
Posada, D., and Crandall, K.A. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics, 14: 817-818. doi:10.1093/bioinformatics/14. 9.817. PMID:9918953.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
54
-
-
0000364756
-
Embryogeny in Phyllocladus
-
Quinn, C.J. 1986. Embryogeny in Phyllocladus. N.Z. J. Bot. 24: 575-580.
-
(1986)
N.Z. J. Bot
, vol.24
, pp. 575-580
-
-
Quinn, C.J.1
-
55
-
-
0000583224
-
The Phyllocladaceae Keng - a critique
-
doi:10.2307/1221846
-
Quinn, C.J. 1987. The Phyllocladaceae Keng - a critique. Taxon, 36: 559-565. doi:10.2307/1221846.
-
(1987)
Taxon
, vol.36
, pp. 559-565
-
-
Quinn, C.J.1
-
56
-
-
0036395183
-
Familial concepts and relationships in the conifers based on rbcL and matK sequence comparisons
-
doi:10.2307/4110984
-
Quinn, C.J., Price, R.A., and Gadek, P.A. 2002. Familial concepts and relationships in the conifers based on rbcL and matK sequence comparisons. Kew Bull. 57: 513-531. doi:10.2307/4110984.
-
(2002)
Kew Bull
, vol.57
, pp. 513-531
-
-
Quinn, C.J.1
Price, R.A.2
Gadek, P.A.3
-
57
-
-
0842291765
-
Inference of higher-order relationships in the cycads from a large chloroplast data set
-
PMID:13678689, doi:10.1016/S1055-7903(03)00131-3
-
Rai, H.S., O'Brien, H.E., Reeves, P.A., and Graham, S.W. 2003. Inference of higher-order relationships in the cycads from a large chloroplast data set. Mol. Phylogenet. Evol. 29: 350-359. doi:10.1016/S1055-7903(03)00131-3. PMID:13678689.
-
(2003)
Mol. Phylogenet. Evol
, vol.29
, pp. 350-359
-
-
Rai, H.S.1
O'Brien, H.E.2
Reeves, P.A.3
Graham, S.W.4
-
58
-
-
47649123178
-
-
Rambaut, A. 1998. Se-Al Sequence Alignment Editor Version 1.0, Computer program and documentation. Department of Zoology, University of Oxford, UK
-
Rambaut, A. 1998. "Se-Al (Sequence Alignment Editor Version 1.0)," Computer program and documentation. Department of Zoology, University of Oxford, UK.
-
-
-
-
59
-
-
0002032093
-
A rare chloroplast-DNA structural mutation is shared by all conifers
-
doi:10.1016/0305-1978(92)90067-N
-
Raubeson, L.A., and Jansen, R.K. 1992. A rare chloroplast-DNA structural mutation is shared by all conifers. Biochem. Syst. Ecol. 20: 17-24. doi:10.1016/0305-1978(92)90067-N.
-
(1992)
Biochem. Syst. Ecol
, vol.20
, pp. 17-24
-
-
Raubeson, L.A.1
Jansen, R.K.2
-
60
-
-
0027947860
-
Lignophyte phylogeny and the evolution of spermatophytes: A numerical cladistic analysis
-
doi:10.2307/2419767
-
Rothwell, G.W., and Serbet, R. 1994. Lignophyte phylogeny and the evolution of spermatophytes: a numerical cladistic analysis. Syst. Bot. 19: 443-482. doi:10.2307/2419767.
-
(1994)
Syst. Bot
, vol.19
, pp. 443-482
-
-
Rothwell, G.W.1
Serbet, R.2
-
61
-
-
0036177790
-
Seed plant relationships and the systematic position of Gnetales based on nuclear and chloroplast DNA: Conflicting data, rooting problems, and the monophyly of conifers
-
doi:10.1086/338321
-
Rydin, C., Källersjö, M., and Friis, E.M. 2002. Seed plant relationships and the systematic position of Gnetales based on nuclear and chloroplast DNA: conflicting data, rooting problems, and the monophyly of conifers. Int. J. Plant Sci. 163: 197-214. doi:10.1086/338321.
-
(2002)
Int. J. Plant Sci
, vol.163
, pp. 197-214
-
-
Rydin, C.1
Källersjö, M.2
Friis, E.M.3
-
62
-
-
33947248069
-
Hydatellaceae identified as a new branch near the base of the angiosperm phylogenetic tree
-
PMID:17361182, doi:10.1038/nature05612
-
Saarela, J.M., Rai, H.S., Doyle, J.A., Endress, P.K., Mathews, S., Marchant, A.D., Briggs, B.G., and Graham, S.W. 2007. Hydatellaceae identified as a new branch near the base of the angiosperm phylogenetic tree. Nature (London), 446: 312-315. doi:10.1038/nature05612. PMID:17361182.
-
(2007)
Nature (London)
, vol.446
, pp. 312-315
-
-
Saarela, J.M.1
Rai, H.S.2
Doyle, J.A.3
Endress, P.K.4
Mathews, S.5
Marchant, A.D.6
Briggs, B.G.7
Graham, S.W.8
-
63
-
-
0034069504
-
Error, bias, and long-branch attraction in data for two chloroplast photosystem genes in seed plants
-
PMID:10779539
-
Sanderson, M.J., Wojciechowski, M.F., Hu, J.M., Sher Khan, T., and Brady, S.G. 2000. Error, bias, and long-branch attraction in data for two chloroplast photosystem genes in seed plants. Mol. Biol. Evol. 17: 782-797. PMID:10779539.
-
(2000)
Mol. Biol. Evol
, vol.17
, pp. 782-797
-
-
Sanderson, M.J.1
Wojciechowski, M.F.2
Hu, J.M.3
Sher Khan, T.4
Brady, S.G.5
-
64
-
-
0032228910
-
Phylogenetic relationships within Araucariaceae based on rbcL gene sequences
-
doi:10.2307/2446478
-
Setoguchi, H., Osawa, T.A., Pintaud, J.-C., Jaffré, T., and Veillon, J.-M. 1998. Phylogenetic relationships within Araucariaceae based on rbcL gene sequences. Am. J. Bot. 85: 1507-1516. doi:10.2307/2446478.
-
(1998)
Am. J. Bot
, vol.85
, pp. 1507-1516
-
-
Setoguchi, H.1
Osawa, T.A.2
Pintaud, J.-C.3
Jaffré, T.4
Veillon, J.-M.5
-
65
-
-
0036709322
-
Evolutionary relationships of the New Caledonian heterotrophic conifer, Parasitaxus usta (Podocarpaceae), inferred from chloroplast trnL-F intron/spacer and nuclear rDNA ITS2 sequences
-
doi:10.1007/s00606-002-0199-8
-
Sinclair, W.T., Mill, R.R., Gardner, M.F., Woltz, P., Jaffré, T., Preston, J., Hollingsworth, M.L., Ponge, A., and Möller, M. 2002. Evolutionary relationships of the New Caledonian heterotrophic conifer, Parasitaxus usta (Podocarpaceae), inferred from chloroplast trnL-F intron/spacer and nuclear rDNA ITS2 sequences. Plant Syst. Evol. 233: 79-104. doi:10.1007/s00606-002-0199-8.
-
(2002)
Plant Syst. Evol
, vol.233
, pp. 79-104
-
-
Sinclair, W.T.1
Mill, R.R.2
Gardner, M.F.3
Woltz, P.4
Jaffré, T.5
Preston, J.6
Hollingsworth, M.L.7
Ponge, A.8
Möller, M.9
-
66
-
-
0032229884
-
Phylogenetic relationships of conifers inferred from partial 28S rRNA gene sequences
-
doi:10.2307/2446539
-
Stefanovic, S., Jager, M., Deutsch, J., Broutin, J., and Masselot, M. 1998. Phylogenetic relationships of conifers inferred from partial 28S rRNA gene sequences. Am. J. Bot. 85: 688-697. doi:10.2307/2446539.
-
(1998)
Am. J. Bot
, vol.85
, pp. 688-697
-
-
Stefanovic, S.1
Jager, M.2
Deutsch, J.3
Broutin, J.4
Masselot, M.5
-
67
-
-
47649105238
-
-
Stockey, R.A., Kvacek, J., Hill, R.S., Rothwell, G.W., and Kvacek, K. 2005. The fossil record of Cupressaceae s. lat. In A monograph of Cupressaceae and Sciadopitys. Edited by A. Farjon. Royal Botanic Gardens, Kew, Richmond, Surrey, UK. pp. 64-68.
-
Stockey, R.A., Kvacek, J., Hill, R.S., Rothwell, G.W., and Kvacek, K. 2005. The fossil record of Cupressaceae s. lat. In A monograph of Cupressaceae and Sciadopitys. Edited by A. Farjon. Royal Botanic Gardens, Kew, Richmond, Surrey, UK. pp. 64-68.
-
-
-
-
68
-
-
0344889087
-
Female reproductive structures in Taxales
-
Stützel, T., and Röwekamp, I. 1999. Female reproductive structures in Taxales. Flora, 194: 145-157.
-
(1999)
Flora
, vol.194
, pp. 145-157
-
-
Stützel, T.1
Röwekamp, I.2
-
69
-
-
0035527373
-
Should we use model-based methods for phylogenetic inference when we know that assumptions about among-site rate variation and nucleotide substitution patterns are violated?
-
PMID:12116942, doi:10.1080/106351501753328848
-
Sullivan, J., and Swofford, D.L. 2001. Should we use model-based methods for phylogenetic inference when we know that assumptions about among-site rate variation and nucleotide substitution patterns are violated? Syst. Biol. 50: 723-729. doi:10.1080/106351501753328848. PMID:12116942.
-
(2001)
Syst. Biol
, vol.50
, pp. 723-729
-
-
Sullivan, J.1
Swofford, D.L.2
-
70
-
-
47649092024
-
-
Swofford, D.L. 2002. PAUP*. Phylogenetic Analysis Using Parsimony *and Other Methods, Version 4. Computer program and documentation. Sinauer Associates, Sunderland, Mass
-
Swofford, D.L. 2002. PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4. Computer program and documentation. Sinauer Associates, Sunderland, Mass.
-
-
-
-
71
-
-
0001336205
-
Phylogenetic inference
-
2nd ed. Edited by D.M. Hillis, C. Moritz, and B.K. Mable. Sinauer Associates, Sunderland, Mass. pp
-
Swofford, D.L., Olsen, G.J., Waddell, P.J., and Hillis, D.M. 1996. Phylogenetic inference. In Molecular systematics. 2nd ed. Edited by D.M. Hillis, C. Moritz, and B.K. Mable. Sinauer Associates, Sunderland, Mass. pp. 407-514
-
(1996)
Molecular systematics
, pp. 407-514
-
-
Swofford, D.L.1
Olsen, G.J.2
Waddell, P.J.3
Hillis, D.M.4
-
72
-
-
0002105645
-
Phylogenetic principles of the system of higher plants
-
doi:10.1007/BF02861725
-
Takhtajan, A.L. 1953. Phylogenetic principles of the system of higher plants. Bot. Rev. 19: 1-45. doi:10.1007/BF02861725.
-
(1953)
Bot. Rev
, vol.19
, pp. 1-45
-
-
Takhtajan, A.L.1
-
73
-
-
0036963853
-
Seed cone structure in conifers in relation to development and pollination: A biological approach
-
doi:10.1139/b02-112
-
Tomlinson, P.B., and Takaso, T. 2002. Seed cone structure in conifers in relation to development and pollination: a biological approach. Can. J. Bot. 80: 1250-1273. doi:10.1139/b02-112.
-
(2002)
Can. J. Bot
, vol.80
, pp. 1250-1273
-
-
Tomlinson, P.B.1
Takaso, T.2
-
74
-
-
0028043489
-
Loss of all ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thunbergii
-
PMID:7937893, doi:10.1073/pnas.91.21.9794
-
Wakasugi, T., Tsudzuki, J., Ito, S., Nakashima, K., Tsudzuki, T., and Sugiura, M. 1994. Loss of all ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thunbergii. Proc. Natl. Acad. Sci. U.S.A. 91: 9794-9798. doi:10.1073/pnas.91.21.9794. PMID:7937893.
-
(1994)
Proc. Natl. Acad. Sci. U.S.A
, vol.91
, pp. 9794-9798
-
-
Wakasugi, T.1
Tsudzuki, J.2
Ito, S.3
Nakashima, K.4
Tsudzuki, T.5
Sugiura, M.6
-
75
-
-
0032028624
-
On the best evolutionary rate for phylogenetic analysis
-
PMID:12064232, doi:10.1080/106351598261067
-
Yang, Z. 1998. On the best evolutionary rate for phylogenetic analysis. Syst. Biol. 47: 125-133. doi:10.1080/106351598261067. PMID:12064232.
-
(1998)
Syst. Biol
, vol.47
, pp. 125-133
-
-
Yang, Z.1
-
76
-
-
0030990186
-
A taxodiaceous seed cone from the Triassic of Antarctica
-
doi:10.2307/2446008
-
Yao, X., Taylor, T.N., and Taylor, E.L. 1997. A taxodiaceous seed cone from the Triassic of Antarctica. Am. J. Bot. 84: 343-354. doi:10.2307/2446008.
-
(1997)
Am. J. Bot
, vol.84
, pp. 343-354
-
-
Yao, X.1
Taylor, T.N.2
Taylor, E.L.3
-
77
-
-
44149097348
-
How well do we understand the overall backbone of cycad phylogeny? New insights from a large, multigene plastid data set
-
doi:10.1016/j.ympev.2008.03.002
-
Zgurski, J.M., Rai, H.S., Fai, Q.M., Bogler, D.J., Francisco-Ortega, J., and Graham, S.W. 2008. How well do we understand the overall backbone of cycad phylogeny? New insights from a large, multigene plastid data set. Mol. Phylogenet. Evol. 47: 1232-1237. doi:10.1016/j.ympev.2008.03.002.
-
(2008)
Mol. Phylogenet. Evol
, vol.47
, pp. 1232-1237
-
-
Zgurski, J.M.1
Rai, H.S.2
Fai, Q.M.3
Bogler, D.J.4
Francisco-Ortega, J.5
Graham, S.W.6
|