-
1
-
-
25144432091
-
Molecular systematic studies in cycads: evidence from trnL intron and ITS2 rDNA sequences
-
Bogler D.J., and Francisco-Ortega J. Molecular systematic studies in cycads: evidence from trnL intron and ITS2 rDNA sequences. Bot. Rev. 70 (2004) 260-273
-
(2004)
Bot. Rev.
, vol.70
, pp. 260-273
-
-
Bogler, D.J.1
Francisco-Ortega, J.2
-
2
-
-
0141726796
-
Cycads: evolutionary innovations and the role of plant-derived neurotoxins
-
Brenner E.D., Stevenson D.W., and Twigg R.W. Cycads: evolutionary innovations and the role of plant-derived neurotoxins. Trends Plant Sci. 8 (2003) 446-452
-
(2003)
Trends Plant Sci.
, vol.8
, pp. 446-452
-
-
Brenner, E.D.1
Stevenson, D.W.2
Twigg, R.W.3
-
3
-
-
10644238478
-
Phylogenetic signal in nucleotide data from seed plants: implications for resolving the seed plant tree of life
-
Burleigh J.G., and Mathews S. Phylogenetic signal in nucleotide data from seed plants: implications for resolving the seed plant tree of life. Am. J. Bot. 91 (2004) 1599-1613
-
(2004)
Am. J. Bot.
, vol.91
, pp. 1599-1613
-
-
Burleigh, J.G.1
Mathews, S.2
-
4
-
-
33847243366
-
Assessing among-locus variation in the inference of seed plant phylogeny
-
Burleigh J.G., and Mathews S. Assessing among-locus variation in the inference of seed plant phylogeny. Int. J. Plant Sci. 168 (2007) 111-124
-
(2007)
Int. J. Plant Sci.
, vol.168
, pp. 111-124
-
-
Burleigh, J.G.1
Mathews, S.2
-
5
-
-
33847212859
-
Assessing systematic error in the inference of seed plant phylogeny
-
Burleigh J.G., and Mathews S. Assessing systematic error in the inference of seed plant phylogeny. Int. J. Plant Sci. 168 (2007) 125-135
-
(2007)
Int. J. Plant Sci.
, vol.168
, pp. 125-135
-
-
Burleigh, J.G.1
Mathews, S.2
-
6
-
-
25144494505
-
A phylogeny of cycads (Cycadales) inferred from chloroplast matK gene, trnK intron, and nuclear rDNA ITS region
-
Chaw S.-M., Walters T.W., Chang C.-C., Hu S.-H., and Chen S.-H. A phylogeny of cycads (Cycadales) inferred from chloroplast matK gene, trnK intron, and nuclear rDNA ITS region. Mol. Phylogenet. Evol. 37 (2005) 214-234
-
(2005)
Mol. Phylogenet. Evol.
, vol.37
, pp. 214-234
-
-
Chaw, S.-M.1
Walters, T.W.2
Chang, C.-C.3
Hu, S.-H.4
Chen, S.-H.5
-
7
-
-
25144460823
-
Comments on Cycas, Dyerocycas and Epicycas (Cycadaceae)
-
Walters T., and Osborne R. (Eds), CABI Publishing, Cambridge, MA
-
Chen C.-J., Hill K.D., and Stevenson D.W. Comments on Cycas, Dyerocycas and Epicycas (Cycadaceae). In: Walters T., and Osborne R. (Eds). Cycad Classification: Concepts and Recommendations (2004), CABI Publishing, Cambridge, MA 57-68
-
(2004)
Cycad Classification: Concepts and Recommendations
, pp. 57-68
-
-
Chen, C.-J.1
Hill, K.D.2
Stevenson, D.W.3
-
8
-
-
0013502330
-
Cycads of the world: an overview
-
Donaldson J. (Ed), IUCN/SSC Cycad Specialist Group, IUCN, Gland, Switzerland and Cambridge, UK
-
Donaldson J., Hill K.D., and Stevenson D.W. Cycads of the world: an overview. In: Donaldson J. (Ed). Cycads. Status Survey and Conservation Action Plan (2003), IUCN/SSC Cycad Specialist Group, IUCN, Gland, Switzerland and Cambridge, UK 3-19
-
(2003)
Cycads. Status Survey and Conservation Action Plan
, pp. 3-19
-
-
Donaldson, J.1
Hill, K.D.2
Stevenson, D.W.3
-
9
-
-
33646727380
-
Seed ferns and the origin of angiosperms
-
Doyle J.A. Seed ferns and the origin of angiosperms. J. Torrey Bot. Soc. 133 (2006) 169-209
-
(2006)
J. Torrey Bot. Soc.
, vol.133
, pp. 169-209
-
-
Doyle, J.A.1
-
10
-
-
0020933869
-
Parsimony in systematics: biological and statistical issues
-
Felsenstein J. Parsimony in systematics: biological and statistical issues. Annu. Rev. Ecol. Syst. 14 (1983) 313-333
-
(1983)
Annu. Rev. Ecol. Syst.
, vol.14
, pp. 313-333
-
-
Felsenstein, J.1
-
11
-
-
0000461280
-
Confidence limits on phylogenies: an approach using the bootstrap
-
Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39 (1985) 783-791
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
12
-
-
0024887226
-
A review of fossil cycad megasporophylls, with new evidence of Crossozamia Pomel and its associated leaves from the lower Permian of Taiyuan, China
-
Gao Z.-F., and Thomas B.A. A review of fossil cycad megasporophylls, with new evidence of Crossozamia Pomel and its associated leaves from the lower Permian of Taiyuan, China. Rev. Palaeobot. Palynol. 60 (1989) 205-223
-
(1989)
Rev. Palaeobot. Palynol.
, vol.60
, pp. 205-223
-
-
Gao, Z.-F.1
Thomas, B.A.2
-
13
-
-
0034351387
-
Likelihood-based tests of topologies in phylogenetics
-
Goldman N., Anderson J.P., and Rodrigo A.G. Likelihood-based tests of topologies in phylogenetics. Syst. Biol. 49 (2000) 652-670
-
(2000)
Syst. Biol.
, vol.49
, pp. 652-670
-
-
Goldman, N.1
Anderson, J.P.2
Rodrigo, A.G.3
-
14
-
-
0033666273
-
Utility of 17 chloroplast genes for inferring the phylogeny of the basal angiosperms
-
Graham S.W., and Olmstead R.G. Utility of 17 chloroplast genes for inferring the phylogeny of the basal angiosperms. Am. J. Bot. 87 (2000) 1712-1730
-
(2000)
Am. J. Bot.
, vol.87
, pp. 1712-1730
-
-
Graham, S.W.1
Olmstead, R.G.2
-
15
-
-
0033679542
-
Microstructural changes in noncoding chloroplast DNA: interpretation, evolution, and utility of indels and inversions in basal angiosperm phylogenetic inference
-
Graham S.W., Reeves P.A., Burns A.C.E., and Olmstead R.G. Microstructural changes in noncoding chloroplast DNA: interpretation, evolution, and utility of indels and inversions in basal angiosperm phylogenetic inference. Int. J. Plant Sci. 161 (2000) S83-S96
-
(2000)
Int. J. Plant Sci.
, vol.161
-
-
Graham, S.W.1
Reeves, P.A.2
Burns, A.C.E.3
Olmstead, R.G.4
-
16
-
-
38949143348
-
Robust inference of monocot deep phylogeny using an expanded multigene plastid data set
-
Columbus J.T., Friar E.A., Porter J.M., Prince L.M., and Simpson M.G. (Eds), Rancho Santa Ana Botanic Garden, Claremont, CA
-
Graham S.W., Zgurski J.M., McPherson M.A., Cherniawsky D.M., Saarela J.M., Horne E.F.C., Smith S.Y., Wong W.A., O'Brien H.E., Biron V.L., Pires J.C., Olmstead R.G., Chase M.W., and Rai H.S. Robust inference of monocot deep phylogeny using an expanded multigene plastid data set. In: Columbus J.T., Friar E.A., Porter J.M., Prince L.M., and Simpson M.G. (Eds). Monocots: Comparative Biology and Evolution (Excluding Poales) (2006), Rancho Santa Ana Botanic Garden, Claremont, CA 3-21
-
(2006)
Monocots: Comparative Biology and Evolution (Excluding Poales)
, pp. 3-21
-
-
Graham, S.W.1
Zgurski, J.M.2
McPherson, M.A.3
Cherniawsky, D.M.4
Saarela, J.M.5
Horne, E.F.C.6
Smith, S.Y.7
Wong, W.A.8
O'Brien, H.E.9
Biron, V.L.10
Pires, J.C.11
Olmstead, R.G.12
Chase, M.W.13
Rai, H.S.14
-
17
-
-
33646414537
-
Cataphylls of the middle Triassic cycad Antarcticycas schopfii and new insights into cycad evolution
-
Hermsen E.J., Taylor T.N., Taylor E.L., and Stevenson D.W. Cataphylls of the middle Triassic cycad Antarcticycas schopfii and new insights into cycad evolution. Am. J. Bot. 93 (2006) 724-738
-
(2006)
Am. J. Bot.
, vol.93
, pp. 724-738
-
-
Hermsen, E.J.1
Taylor, T.N.2
Taylor, E.L.3
Stevenson, D.W.4
-
18
-
-
0842264146
-
The families and genera of cycads: a molecular phylogenetic analysis of Cycadophyta based on nuclear and plastid DNA sequences
-
Hill K.D., Chase M.W., Stevenson D.W., Hills H.G., and Schutzman B. The families and genera of cycads: a molecular phylogenetic analysis of Cycadophyta based on nuclear and plastid DNA sequences. Int. J. Plant Sci. 164 (2003) 933-948
-
(2003)
Int. J. Plant Sci.
, vol.164
, pp. 933-948
-
-
Hill, K.D.1
Chase, M.W.2
Stevenson, D.W.3
Hills, H.G.4
Schutzman, B.5
-
19
-
-
33646720320
-
Pteridosperms are the backbone of seed-plant phylogeny
-
Hilton J., and Bateman R.M. Pteridosperms are the backbone of seed-plant phylogeny. J. Torrey Bot. Soc. 133 (2006) 119-168
-
(2006)
J. Torrey Bot. Soc.
, vol.133
, pp. 119-168
-
-
Hilton, J.1
Bateman, R.M.2
-
21
-
-
0031773680
-
MODELTEST: Testing the model of DNA substitution
-
Posada D., and Crandall K.A. MODELTEST: Testing the model of DNA substitution. Bioinformatics 14 (1998) 817-818
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
22
-
-
0842291765
-
Inference of higher-order relationships in the cycads from a large chloroplast data set
-
Rai H.S., O'Brien H.E., Reeves P.A., Olmstead R.G., and Graham S.W. Inference of higher-order relationships in the cycads from a large chloroplast data set. Mol. Phylogenet. Evol. 29 (2003) 350-359
-
(2003)
Mol. Phylogenet. Evol.
, vol.29
, pp. 350-359
-
-
Rai, H.S.1
O'Brien, H.E.2
Reeves, P.A.3
Olmstead, R.G.4
Graham, S.W.5
-
23
-
-
44149089117
-
-
Rai, H.S., Reeves, P.A., Peakall, R., Olmstead, R.G., Graham, S.W., in press. Inference of higher-order conifer relationships from a multi-locus plastid data set. Botany.
-
Rai, H.S., Reeves, P.A., Peakall, R., Olmstead, R.G., Graham, S.W., in press. Inference of higher-order conifer relationships from a multi-locus plastid data set. Botany.
-
-
-
-
24
-
-
44149095801
-
-
Rambaut, A., 1998. Se-Al (Sequence Alignment Editor Version 1.0), Computer Program and Documentation. Department of Zoology, University of Oxford, UK.
-
Rambaut, A., 1998. Se-Al (Sequence Alignment Editor Version 1.0), Computer Program and Documentation. Department of Zoology, University of Oxford, UK.
-
-
-
-
25
-
-
33947248069
-
Hydatellaceae identified as a new branch near the base of the angiosperm phylogenetic tree
-
Saarela J.M., Rai H.S., Doyle J.A., Endress P.K., Mathews S., Marchant A.D., Briggs B.G., and Graham S.W. Hydatellaceae identified as a new branch near the base of the angiosperm phylogenetic tree. Nature 446 (2007) 312-315
-
(2007)
Nature
, vol.446
, pp. 312-315
-
-
Saarela, J.M.1
Rai, H.S.2
Doyle, J.A.3
Endress, P.K.4
Mathews, S.5
Marchant, A.D.6
Briggs, B.G.7
Graham, S.W.8
-
26
-
-
0032766857
-
Multiple comparisons of log-likelihoods with applications to phylogenetic inference
-
Shimodaira H., and Hasegawa M. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol. Biol. Evol. 16 (1999) 1114-1116
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1114-1116
-
-
Shimodaira, H.1
Hasegawa, M.2
-
27
-
-
0001035344
-
A formal classification of the extant cycads
-
Stevenson D.W. A formal classification of the extant cycads. Brittonia 44 (1992) 220-223
-
(1992)
Brittonia
, vol.44
, pp. 220-223
-
-
Stevenson, D.W.1
-
28
-
-
0038586502
-
Confidence regions and hypothesis tests for topologies using generalized least squares
-
Susko E. Confidence regions and hypothesis tests for topologies using generalized least squares. Mol. Biol. Evol. 20 (2003) 862-868
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 862-868
-
-
Susko, E.1
-
29
-
-
0002529938
-
When are phylogenetic estimates from molecular and morphological data incongruent?
-
Miyamoto M.M., and Cracraft J. (Eds), Oxford University Press, New York
-
Swofford D.L. When are phylogenetic estimates from molecular and morphological data incongruent?. In: Miyamoto M.M., and Cracraft J. (Eds). Phylogenetic Analysis of DNA Sequences (1991), Oxford University Press, New York 295-333
-
(1991)
Phylogenetic Analysis of DNA Sequences
, pp. 295-333
-
-
Swofford, D.L.1
-
31
-
-
34548108492
-
Chloroplast genome (cpDNA) of Cycas taitungensis and 56 cp protein-coding genes of Gnetum parvifolium: insights into cpDNA evolution and phylogeny of extant seed plants
-
Wu C.-S., Wang Y.-N., Liu S.-M., and Chaw S.-M. Chloroplast genome (cpDNA) of Cycas taitungensis and 56 cp protein-coding genes of Gnetum parvifolium: insights into cpDNA evolution and phylogeny of extant seed plants. Mol. Biol. Evol. 24 (2007) 1366-1379
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1366-1379
-
-
Wu, C.-S.1
Wang, Y.-N.2
Liu, S.-M.3
Chaw, S.-M.4
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