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Volumn 91, Issue 10, 2004, Pages 1599-1613

Phylogenetic signal in nucleotide data from seed plants: Implications for resolving the seed plant tree of life

Author keywords

Gnetales; Multilocus analyses; Phylogenetic signal; Rate class; Seed plant phylogeny; Taxonomic sampling

Indexed keywords

EVOLUTION; PHYLOGENY; PLANT; SEED;

EID: 10644238478     PISSN: 00029122     EISSN: 00029122     Source Type: Journal    
DOI: 10.3732/ajb.91.10.1599     Document Type: Article
Times cited : (178)

References (98)
  • 4
    • 0000290534 scopus 로고
    • Studies on the evolution of the angiosperms. The relationship of the angiosperms to the Gnetales
    • ARBER, E. A. N., AND J. PARKIN. 1908. Studies on the evolution of the angiosperms. The relationship of the angiosperms to the Gnetales. Annals of Botany 22: 489-515.
    • (1908) Annals of Botany , vol.22 , pp. 489-515
    • Arber, E.A.N.1    Parkin, J.2
  • 5
    • 1642569137 scopus 로고    scopus 로고
    • Least and most powerful phylogenetic tests to elucidate the origin of the seed plants in the presence of conflicting signals under misspecified models
    • ARIS-BROSOU, S. 2003. Least and most powerful phylogenetic tests to elucidate the origin of the seed plants in the presence of conflicting signals under misspecified models. Systematic Biology 52: 781-793.
    • (2003) Systematic Biology , vol.52 , pp. 781-793
    • Aris-Brosou, S.1
  • 6
    • 0000269927 scopus 로고
    • The development of vessels in angiosperms and its significance in morphological research
    • BAILEY, I. W. 1944. The development of vessels in angiosperms and its significance in morphological research. American Journal of Botany 31: 421-428.
    • (1944) American Journal of Botany , vol.31 , pp. 421-428
    • Bailey, I.W.1
  • 7
    • 0345581665 scopus 로고    scopus 로고
    • The major clades of MADS-box genes and their role in the development and evolution of flowering plants
    • BECKER, A., AND G. THEISSEN. 2003. The major clades of MADS-box genes and their role in the development and evolution of flowering plants. Molecular Phylogenetics and Evolution 29: 464-489.
    • (2003) Molecular Phylogenetics and Evolution , vol.29 , pp. 464-489
    • Becker, A.1    Theissen, G.2
  • 8
    • 84874984004 scopus 로고
    • Testing the quality of the fossil record: Paleontological knowledge is improving
    • BENTON, M. J., AND G. W. STORRS. 1994. Testing the quality of the fossil record: paleontological knowledge is improving. Geology 22: 111-114.
    • (1994) Geology , vol.22 , pp. 111-114
    • Benton, M.J.1    Storrs, G.W.2
  • 10
    • 0034636023 scopus 로고    scopus 로고
    • Phylogeny of seed plants based on all three genomic compartments: Extant gymnosperms are monophyletic and Gnetales' closest relatives are conifers
    • BOWE, L. M., G. COAT, AND C. W. DE PAMPHILIS. 2000. Phylogeny of seed plants based on all three genomic compartments: extant gymnosperms are monophyletic and Gnetales' closest relatives are conifers. Proceedings of the National Academy of Science, USA 97: 4092-4097.
    • (2000) Proceedings of the National Academy of Science, USA , vol.97 , pp. 4092-4097
    • Bowe, L.M.1    Coat, G.2    De Pamphilis, C.W.3
  • 11
  • 14
    • 0031012107 scopus 로고    scopus 로고
    • Molecular phylogeny of extant gymnosperms and seed plant evolution: Analysis of nuclear 18S rRNA sequences
    • CHAW, S.-M., A. ZHARKIKH, H.-M. SUNG, T.-C. LAU, AND W.-H. LI. 1997. Molecular phylogeny of extant gymnosperms and seed plant evolution: analysis of nuclear 18S rRNA sequences. Molecular Biology and Evolution 14: 56-68.
    • (1997) Molecular Biology and Evolution , vol.14 , pp. 56-68
    • Chaw, S.-M.1    Zharkikh, A.2    Sung, H.-M.3    Lau, T.-C.4    Li, W.-H.5
  • 15
    • 0034636037 scopus 로고    scopus 로고
    • Seed plant phylogeny inferred from all three plant genomes: Monophyly of extant gymnosperms and the origin of Gnetales from conifers
    • CHAW, S.-M., C. L. PARKINSON, Y. CHENG, T. M. VINCENT, AND J. D. PALMER. 2000. Seed plant phylogeny inferred from all three plant genomes: monophyly of extant gymnosperms and the origin of Gnetales from conifers. Proceedings of the National Academy of Sciences, USA 97: 4086-4091.
    • (2000) Proceedings of the National Academy of Sciences, USA , vol.97 , pp. 4086-4091
    • Chaw, S.-M.1    Parkinson, C.L.2    Cheng, Y.3    Vincent, T.M.4    Palmer, J.D.5
  • 16
    • 0000863074 scopus 로고
    • Phylogenetic analysis of seed plants and the origin of angiosperms
    • CRANE, P. R. 1985. Phylogenetic analysis of seed plants and the origin of angiosperms. Annals of the Missouri Botanical Garden 72: 716-793.
    • (1985) Annals of the Missouri Botanical Garden , vol.72 , pp. 716-793
    • Crane, P.R.1
  • 17
    • 0024909360 scopus 로고
    • Vegetational consequences of angiosperm diversification
    • E. M. Friis, W. G. Chaloner, and P. R. Crane [eds.], Cambridge University Press, Cambridge, UK
    • CRANE, P. R. 1987. Vegetational consequences of angiosperm diversification. In E. M. Friis, W. G. Chaloner, and P. R. Crane [eds.], The origins angiosperms and their biological consequences, 107-144. Cambridge University Press, Cambridge, UK.
    • (1987) The Origins Angiosperms and Their Biological Consequences , pp. 107-144
    • Crane, P.R.1
  • 20
    • 0034628615 scopus 로고    scopus 로고
    • Seed plant phylogeny: Demise of the anthophyte hypothesis?
    • DONOGHUE, M. J., AND J. A. DOYLE. 2000. Seed plant phylogeny: demise of the anthophyte hypothesis? Current Biology 10: R106-R109.
    • (2000) Current Biology , vol.10
    • Donoghue, M.J.1    Doyle, J.A.2
  • 22
    • 0030431040 scopus 로고    scopus 로고
    • Seed plant phylogeny and the relationships of Gnetales
    • DOYLE, J. A. 1996. Seed plant phylogeny and the relationships of Gnetales. International Journal of Plant Sciences 157: S3-S39.
    • (1996) International Journal of Plant Sciences , vol.157
    • Doyle, J.A.1
  • 23
    • 0032087222 scopus 로고    scopus 로고
    • Molecules, morphology, fossils, and the relationship of angiosperms and Gnetales
    • DOYLE, J. A. 1998a. Molecules, morphology, fossils, and the relationship of angiosperms and Gnetales. Molecular Phylogenetics and Evolution 9: 448-462.
    • (1998) Molecular Phylogenetics and Evolution , vol.9 , pp. 448-462
    • Doyle, J.A.1
  • 25
    • 0001234321 scopus 로고
    • Seed plant phylogeny and the origin of angiosperms: An experimental cladistic approach
    • DOYLE, J. A., AND M. J. DONOGHUE. 1986. Seed plant phylogeny and the origin of angiosperms: an experimental cladistic approach. Botanical Review 52: 321-431.
    • (1986) Botanical Review , vol.52 , pp. 321-431
    • Doyle, J.A.1    Donoghue, M.J.2
  • 26
    • 0024909359 scopus 로고
    • The origin of angiosperms: A cladistic approach
    • E. M. Friis, W. G. Chaloner, and P. R. Crane [eds.], Cambridge University Press, Cambridge, UK
    • DOYLE, J. A., AND M. J. DONOGHUE. 1987. The origin of angiosperms: a cladistic approach. In E. M. Friis, W. G. Chaloner, and P. R. Crane [eds.], The origins angiosperms and their biological consequences, 17-49. Cambridge University Press, Cambridge, UK.
    • (1987) The Origins Angiosperms and Their Biological Consequences , pp. 17-49
    • Doyle, J.A.1    Donoghue, M.J.2
  • 27
    • 0001858968 scopus 로고
    • Fossils and seed plant phylogeny reanalyzed
    • DOYLE, J. A., AND M. J. DONOGHUE. 1992. Fossils and seed plant phylogeny reanalyzed. Brittonia 44: 89-106.
    • (1992) Brittonia , vol.44 , pp. 89-106
    • Doyle, J.A.1    Donoghue, M.J.2
  • 28
    • 0033713278 scopus 로고    scopus 로고
    • Morphological phylogenetic analysis of basal angiosperms: Comparison and combination with molecular data
    • DOYLE, J. A., AND P. K. ENDRESS. 2000. Morphological phylogenetic analysis of basal angiosperms: comparison and combination with molecular data. International Journal of Plant Sciences 161: S121-S153.
    • (2000) International Journal of Plant Sciences , vol.161
    • Doyle, J.A.1    Endress, P.K.2
  • 29
    • 0002595018 scopus 로고
    • Relationships of the Ephedrales
    • EAMES, A. J. 1952. Relationships of the Ephedrales. Phytomorphology 2: 79-100.
    • (1952) Phytomorphology , vol.2 , pp. 79-100
    • Eames, A.J.1
  • 30
    • 84959798530 scopus 로고
    • Cases in which parsimony or compatibility methods will be positively misleading
    • FELSENSTEIN, J. 1978. Cases in which parsimony or compatibility methods will be positively misleading. Systematic Zoology 27: 401-410.
    • (1978) Systematic Zoology , vol.27 , pp. 401-410
    • Felsenstein, J.1
  • 31
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • FELSENSTEIN, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 33
    • 0001567170 scopus 로고
    • Evolution in cordaites and conifers
    • FLORIN, R. 1951. Evolution in cordaites and conifers. Acta Horti Bergiani 15: 285-388.
    • (1951) Acta Horti Bergiani , vol.15 , pp. 285-388
    • Florin, R.1
  • 34
    • 0035091542 scopus 로고    scopus 로고
    • Perspective: The origin of flowering plants and their reproductive biology - A tale of two phylogenies
    • FRIEDMAN, W. E., AND S. K. FLOYD. 2001. Perspective: the origin of flowering plants and their reproductive biology - a tale of two phylogenies. Evolution 55: 217-231.
    • (2001) Evolution , vol.55 , pp. 217-231
    • Friedman, W.E.1    Floyd, S.K.2
  • 35
    • 0034042674 scopus 로고    scopus 로고
    • The mostly male theory of flower evolutionary origins: From genes to fossils
    • FROLICH, M.W., AND D. S. PARKER. 2000. The mostly male theory of flower evolutionary origins: from genes to fossils. Systematic Botany 25: 155-170.
    • (2000) Systematic Botany , vol.25 , pp. 155-170
    • Frolich, M.W.1    Parker, D.S.2
  • 36
    • 0030052344 scopus 로고    scopus 로고
    • Noncoding sequences from the slowly evolving chloroplast inverted repeat in addition to the rbcL data do not support gnetalean affinities of angiosperms
    • GOREMYKIN, V., V. BOBROVA, J. PAHNKE, J. TROITSKY, A. ANTONOV, AND W. MARTIN. 1996. Noncoding sequences from the slowly evolving chloroplast inverted repeat in addition to the rbcL data do not support gnetalean affinities of angiosperms. Molecular Biology and Evolution 13: 383-396.
    • (1996) Molecular Biology and Evolution , vol.13 , pp. 383-396
    • Goremykin, V.1    Bobrova, V.2    Pahnke, J.3    Troitsky, J.4    Antonov, A.5    Martin, W.6
  • 38
    • 0002780775 scopus 로고
    • Ribosomal RNA as a phylogenetic tool in plant systematics
    • P. S. Soltis, D. E. Soltis, and J. J. Doyle [eds.], Chapman and Hall, New York, New York, USA
    • HAMBY, R. K., AND E. A. ZIMMER. 1992. Ribosomal RNA as a phylogenetic tool in plant systematics. In P. S. Soltis, D. E. Soltis, and J. J. Doyle [eds.], Molecular systematics of plants, 50-91. Chapman and Hall, New York, New York, USA.
    • (1992) Molecular Systematics of Plants , pp. 50-91
    • Hamby, R.K.1    Zimmer, E.A.2
  • 39
    • 0033010029 scopus 로고    scopus 로고
    • Gnetum and the angiosperms: Molecular evidence that their shared morphological characters are convergent rather than homologous
    • HANSEN, A., S. HANSMANN, T. SAMIGULLIN, A. ANTONOV, AND W. MARTIN. 1999. Gnetum and the angiosperms: molecular evidence that their shared morphological characters are convergent rather than homologous. Molecular Biology and Evolution 16: 1006-1009.
    • (1999) Molecular Biology and Evolution , vol.16 , pp. 1006-1009
    • Hansen, A.1    Hansmann, S.2    Samigullin, T.3    Antonov, A.4    Martin, W.5
  • 43
    • 0030776127 scopus 로고    scopus 로고
    • Maximum likelihood estimation of phylogeny using stratigraphic data
    • HUELSENBECK, J. P., AND B. RANNALA. 1997. Maximum likelihood estimation of phylogeny using stratigraphic data. Paleobiology 23: 174-180.
    • (1997) Paleobiology , vol.23 , pp. 174-180
    • Huelsenbeck, J.P.1    Rannala, B.2
  • 44
    • 0005638576 scopus 로고    scopus 로고
    • Using stratigraphic information in phylogenetics
    • J. J. Wiens [ed.], Smithsonian Institution Press, Washington, D.C., USA
    • HUELSENBECK, J. P., AND B. RANNALA. 2000. Using stratigraphic information in phylogenetics. In J. J. Wiens [ed.], Phylogenetic analysis of morphological data, 165-191. Smithsonian Institution Press, Washington, D.C., USA.
    • (2000) Phylogenetic Analysis of Morphological Data , pp. 165-191
    • Huelsenbeck, J.P.1    Rannala, B.2
  • 45
    • 0007816727 scopus 로고
    • Nested gene fusions as markers of phylogenetic branchpoints in prokaryotes
    • JENSEN, R. A., AND S. AHMAD. 1990. Nested gene fusions as markers of phylogenetic branchpoints in prokaryotes. Trends in Ecology and Evolution 5: 219-224.
    • (1990) Trends in Ecology and Evolution , vol.5 , pp. 219-224
    • Jensen, R.A.1    Ahmad, S.2
  • 46
    • 0002854890 scopus 로고
    • Patterns of extinction in the fossil record of vascular plants
    • M. H. Nitecki [ed.], University of Chicago Press, Chicago, Illinois, USA
    • KNOLL, A. H. 1984. Patterns of extinction in the fossil record of vascular plants. In M. H. Nitecki [ed.], Extinctions, 21-68. University of Chicago Press, Chicago, Illinois, USA.
    • (1984) Extinctions , pp. 21-68
    • Knoll, A.H.1
  • 47
    • 0033082662 scopus 로고    scopus 로고
    • IFG, a gypsy-like retrotransposon in Pinus (Pinaceae), has an extensive history in pines
    • KOSSACK, D. S., AND C. S. KINLAW. 1999. IFG, a gypsy-like retrotransposon in Pinus (Pinaceae), has an extensive history in pines. Plant Molecular Biology 39: 417-426.
    • (1999) Plant Molecular Biology , vol.39 , pp. 417-426
    • Kossack, D.S.1    Kinlaw, C.S.2
  • 49
    • 0001392984 scopus 로고
    • Cladistics of the Spermatophyta
    • LOCONTE, H., AND D. W. STEVENSON. 1990. Cladistics of the Spermatophyta. Brittonia 42: 197-211.
    • (1990) Brittonia , vol.42 , pp. 197-211
    • Loconte, H.1    Stevenson, D.W.2
  • 50
    • 0034765180 scopus 로고    scopus 로고
    • Absolute diversification rates in angiosperm clades
    • MAGALLÓN, S., AND M. J. SANDERSON. 2001. Absolute diversification rates in angiosperm clades. Evolution 55: 1762-1780.
    • (2001) Evolution , vol.55 , pp. 1762-1780
    • Magallón, S.1    Sanderson, M.J.2
  • 51
    • 0036950836 scopus 로고    scopus 로고
    • Relationships among seed plants inferred from highly conserved genes: Sorting conflicting phylogenetic signals among ancient lineages
    • MAGALLÓN, S., AND M. J. SANDERSON. 2002. Relationships among seed plants inferred from highly conserved genes: sorting conflicting phylogenetic signals among ancient lineages. American Journal of Botany 89: 1991-2006.
    • (2002) American Journal of Botany , vol.89 , pp. 1991-2006
    • Magallón, S.1    Sanderson, M.J.2
  • 52
    • 0033615479 scopus 로고    scopus 로고
    • The root of the angiosperm phylogeny inferred from duplicate phytochrome genes
    • MATHEWS, S., AND M. J. DONOGHUE. 1999. The root of the angiosperm phylogeny inferred from duplicate phytochrome genes. Science 286: 947-950.
    • (1999) Science , vol.286 , pp. 947-950
    • Mathews, S.1    Donoghue, M.J.2
  • 55
    • 1942453339 scopus 로고    scopus 로고
    • The sequence of the largest subunit of RNA polymerase II is a useful marker for inferring seed plant phylogeny
    • NICKERSON, J., AND G. DROUIN. 2004. The sequence of the largest subunit of RNA polymerase II is a useful marker for inferring seed plant phylogeny. Molecular Phylogenetics and Evolution 31: 403-415.
    • (2004) Molecular Phylogenetics and Evolution , vol.31 , pp. 403-415
    • Nickerson, J.1    Drouin, G.2
  • 56
    • 0033638953 scopus 로고    scopus 로고
    • Multigene phylogeny of land plants with special reference to bryophytes and the earliest land plants
    • NICKRENT, D. L., C. L. PARKINSON, J. D. PALMER, AND R. J. DUFF. 2000. Multigene phylogeny of land plants with special reference to bryophytes and the earliest land plants. Molecular Biology and Evolution 17: 1885-1895.
    • (2000) Molecular Biology and Evolution , vol.17 , pp. 1885-1895
    • Nickrent, D.L.1    Parkinson, C.L.2    Palmer, J.D.3    Duff, R.J.4
  • 59
    • 0033576614 scopus 로고    scopus 로고
    • Multigene analyses identify the three earliest lineages of extant flowering plants
    • PARKINSON, C. L., K. L. ADAMS, AND J. D. PALMER. 1999. Multigene analyses identify the three earliest lineages of extant flowering plants. Current Biology 9: 1485-1488.
    • (1999) Current Biology , vol.9 , pp. 1485-1488
    • Parkinson, C.L.1    Adams, K.L.2    Palmer, J.D.3
  • 60
    • 0036699885 scopus 로고    scopus 로고
    • Increased taxon sampling is advantageous for phylogenetic inference
    • POLLOCK, D. D., D. J. ZWICKL, J. A. MCGUIRE, AND D. M. HILLIS. 2002. Increased taxon sampling is advantageous for phylogenetic inference. Systematic Biology 51: 664-671.
    • (2002) Systematic Biology , vol.51 , pp. 664-671
    • Pollock, D.D.1    Zwickl, D.J.2    McGuire, J.A.3    Hillis, D.M.4
  • 61
    • 0035252353 scopus 로고    scopus 로고
    • Horsetails and ferns are a monophyletic group and the closest living relatives to seed plants
    • PRYER, K. M., H. SCHNEIDER, A. R. SMITH, R. CRANFILL, P. WOLF, J. S. HUNT, AND S. D. SIPES. 2001. Horsetails and ferns are a monophyletic group and the closest living relatives to seed plants. Nature 409: 618-622.
    • (2001) Nature , vol.409 , pp. 618-622
    • Pryer, K.M.1    Schneider, H.2    Smith, A.R.3    Cranfill, R.4    Wolf, P.5    Hunt, J.S.6    Sipes, S.D.7
  • 63
    • 0036395183 scopus 로고    scopus 로고
    • Familial concepts and relationships in the conifers based on rbcL and matK sequence comparisons
    • QUINN, C. J., R. A. PRICE, AND P. A. GADEK. 2002. Familial concepts and relationships in the conifers based on rbcL and matK sequence comparisons. Kew Bulletin 57: 513-531.
    • (2002) Kew Bulletin , vol.57 , pp. 513-531
    • Quinn, C.J.1    Price, R.A.2    Gadek, P.A.3
  • 65
    • 0002032093 scopus 로고
    • A rare chloroplast-DNA structural mutation is shared by all conifers
    • RAUBESON, L. A., AND R. K. JANSEN. 1992. A rare chloroplast-DNA structural mutation is shared by all conifers. Biochemical Systematics and Ecology 20: 17-24.
    • (1992) Biochemical Systematics and Ecology , vol.20 , pp. 17-24
    • Raubeson, L.A.1    Jansen, R.K.2
  • 66
    • 0033793019 scopus 로고    scopus 로고
    • Rare genomic changes as a tool for phylogenetics
    • ROKAS, A., AND P. W. H. HOLLAND. 2000. Rare genomic changes as a tool for phylogenetics. Trends in Ecology and Evolution 15: 454-459.
    • (2000) Trends in Ecology and Evolution , vol.15 , pp. 454-459
    • Rokas, A.1    Holland, P.W.H.2
  • 68
    • 0027947860 scopus 로고
    • Lignophyte phylogeny and the evolution of spermatophytes: A numerical cladistic analysis
    • ROTHWELL, G. R., AND R. SERBET. 1994. Lignophyte phylogeny and the evolution of spermatophytes: a numerical cladistic analysis. Systematic Botany 19: 443-482.
    • (1994) Systematic Botany , vol.19 , pp. 443-482
    • Rothwell, G.R.1    Serbet, R.2
  • 69
    • 0036821739 scopus 로고    scopus 로고
    • Taxon sampling and seed plant phylogeny
    • RYDIN, C., AND M. KÄLLERSJÖ. 2002. Taxon sampling and seed plant phylogeny. Cladistics 18: 484-513.
    • (2002) Cladistics , vol.18 , pp. 484-513
    • Rydin, C.1    Källersjö, M.2
  • 70
    • 0036177790 scopus 로고    scopus 로고
    • Seed plant relationships and the systematic position of Gnetales based on nuclear and chloroplast DNA: Conflicting data, rooting problems, and the monophyly of conifers
    • RYDIN, C., M. KÄLLERSJÖ, AND E. M. FRIIS. 2002. Seed plant relationships and the systematic position of Gnetales based on nuclear and chloroplast DNA: conflicting data, rooting problems, and the monophyly of conifers. International Journal of Plant Sciences 163: 197-214.
    • (2002) International Journal of Plant Sciences , vol.163 , pp. 197-214
    • Rydin, C.1    Källersjö, M.2    Friis, E.M.3
  • 71
    • 0032853708 scopus 로고    scopus 로고
    • Molecular data from the chloroplast rpoC1 gene suggests a deep and distinct dichotomy of contemporary spermatophytes into two monophyla: Gymnosperms (including Gnetales) and angiosperms
    • SAMIGULLIN, T. KH., W. F. MARTIN, A. V. TROITSKY, AND A. S. ANTONOV. 1999. Molecular data from the chloroplast rpoC1 gene suggests a deep and distinct dichotomy of contemporary spermatophytes into two monophyla: gymnosperms (including Gnetales) and angiosperms. Journal of Molecular Evolution 49: 310-315.
    • (1999) Journal of Molecular Evolution , vol.49 , pp. 310-315
    • Samigullin, T.Kh.1    Martin, W.F.2    Troitsky, A.V.3    Antonov, A.S.4
  • 73
    • 0036116424 scopus 로고    scopus 로고
    • The evolution of gymnosperms redrawn by phytochrome genes: The Gnetatae appear at the base of the gymnosperms
    • SCHMIDT, M., AND H. A. W. SCHNEIDER-POETSCH. 2002. The evolution of gymnosperms redrawn by phytochrome genes: the Gnetatae appear at the base of the gymnosperms. Journal of Molecular Evolution 54: 715-724.
    • (2002) Journal of Molecular Evolution , vol.54 , pp. 715-724
    • Schmidt, M.1    Schneider-Poetsch, H.A.W.2
  • 74
    • 15944374595 scopus 로고    scopus 로고
    • Phytochrome genes in higher plants and their expression
    • In press. Kluwer Academic Publishers, Dordrect, Netherlands
    • SHARROCK, R. A., AND S. MATHEWS. In press. Phytochrome genes in higher plants and their expression. In Photomorphogenesis in plants, 3rd ed. Kluwer Academic Publishers, Dordrect, Netherlands.
    • Photomorphogenesis in Plants, 3rd Ed.
    • Sharrock, R.A.1    Mathews, S.2
  • 77
    • 0036800892 scopus 로고    scopus 로고
    • Phylogeny of seed plants based on evidence from eight genes
    • SOLTIS, D. E., P. S. SOLTIS, AND M. J. ZANIS. 2002. Phylogeny of seed plants based on evidence from eight genes. American Journal of Botany 89: 1670-1681.
    • (2002) American Journal of Botany , vol.89 , pp. 1670-1681
    • Soltis, D.E.1    Soltis, P.S.2    Zanis, M.J.3
  • 81
    • 0029880314 scopus 로고    scopus 로고
    • The effect of topology on estimates of among-site rate variation
    • SULLIVAN, J., K. E. HOLSINGER, AND C. SIMON. 1996. The effect of topology on estimates of among-site rate variation. Journal of Molecular Evolution 42: 308-312.
    • (1996) Journal of Molecular Evolution , vol.42 , pp. 308-312
    • Sullivan, J.1    Holsinger, K.E.2    Simon, C.3
  • 82
    • 0032875445 scopus 로고    scopus 로고
    • The effect of taxon sampling on estimating rate heterogeneity parameters of maximum-likelihood models
    • SULLIVAN, J., D. L. SWOFFORD, AND G. P. NAYLOR. 1999. The effect of taxon sampling on estimating rate heterogeneity parameters of maximum-likelihood models. Molecular Biology and Evolution 16: 1347-1356.
    • (1999) Molecular Biology and Evolution , vol.16 , pp. 1347-1356
    • Sullivan, J.1    Swofford, D.L.2    Naylor, G.P.3
  • 84
    • 0001336205 scopus 로고    scopus 로고
    • Phylogenetic inference
    • D. M. Hillis, C. Moritz, and B. K. Mable [eds.], Sinauer, Sunderland, Massachusetts, USA
    • SWOFFORD, D. L., G. J. OLSEN, P. WADDELL, AND D. M. HILLIS. 1996. Phylogenetic inference. In D. M. Hillis, C. Moritz, and B. K. Mable [eds.], Molecular systematics, 407-425. Sinauer, Sunderland, Massachusetts, USA.
    • (1996) Molecular Systematics , pp. 407-425
    • Swofford, D.L.1    Olsen, G.J.2    Waddell, P.3    Hillis, D.M.4
  • 86
    • 0002671410 scopus 로고
    • Some probabilistic and statistical problems on the analysis of DNA sequences
    • R. M. Miura [ed.], American Mathematics Society, Providence, Rhode Island, USA
    • TAVARÉ, S. 1986. Some probabilistic and statistical problems on the analysis of DNA sequences. In R. M. Miura [ed.], Lectures on mathematics in the life sciences, 5786. American Mathematics Society, Providence, Rhode Island, USA.
    • (1986) Lectures on Mathematics in the Life Sciences , pp. 5786
    • Tavaré, S.1
  • 87
    • 0002095199 scopus 로고
    • A phylogenetic classification of the Angiospermae
    • THORNE, R. F. 1976. A phylogenetic classification of the Angiospermae. Evolutionary Biology 9: 35-106.
    • (1976) Evolutionary Biology , vol.9 , pp. 35-106
    • Thorne, R.F.1
  • 88
    • 0036963853 scopus 로고    scopus 로고
    • Seed cone structure in conifers in relation to development and pollination: A biological approach
    • TOMLINSON, P. B., AND T. TAKASO. 2002. Seed cone structure in conifers in relation to development and pollination: a biological approach. Canadian Journal of Botany 80: 1250-1273.
    • (2002) Canadian Journal of Botany , vol.80 , pp. 1250-1273
    • Tomlinson, P.B.1    Takaso, T.2
  • 89
    • 0026506180 scopus 로고
    • Chloroplast DNA of black pine retains a residual inverted repeat lacking rRNA genes: Nucleotide sequences of trnZ, trnK, psbA, trnI, and trnH and the absence of rps16
    • TSUDZUKI, J., K. NAKASHIMA, T. TSUDZUKI, J. HIRATSUKA, M. SHIBATA, T. WAKASUGI, AND M. SUGIURA. 1992. Chloroplast DNA of black pine retains a residual inverted repeat lacking rRNA genes: nucleotide sequences of trnZ, trnK, psbA, trnI, and trnH and the absence of rps16. Molecular and General Genetics 232: 206-214.
    • (1992) Molecular and General Genetics , vol.232 , pp. 206-214
    • Tsudzuki, J.1    Nakashima, K.2    Tsudzuki, T.3    Hiratsuka, J.4    Shibata, M.5    Wakasugi, T.6    Sugiura, M.7
  • 93
    • 0042905752 scopus 로고    scopus 로고
    • Missing data, incomplete taxa, and phylogenetic accuracy
    • WIENS, J. J. 2003. Missing data, incomplete taxa, and phylogenetic accuracy. Systematic Biology 52: 528-538.
    • (2003) Systematic Biology , vol.52 , pp. 528-538
    • Wiens, J.J.1
  • 94
    • 0345137756 scopus 로고
    • A new interpretation of the coniferous cones: I. Podocarpaceae (Podocarpus)
    • WILDE, M. H. 1944. A new interpretation of the coniferous cones: I. Podocarpaceae (Podocarpus). Annals of Botany 8: 1-41.
    • (1944) Annals of Botany , vol.8 , pp. 1-41
    • Wilde, M.H.1
  • 96
    • 0028064845 scopus 로고
    • Maximizing likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
    • YANG, Z. 1994. Maximizing likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. Journal of Molecular Evolution 39: 306-314.
    • (1994) Journal of Molecular Evolution , vol.39 , pp. 306-314
    • Yang, Z.1
  • 97
    • 0032028624 scopus 로고    scopus 로고
    • On the best evolutionary rate for phylogenetic analysis
    • YANG, Z. 1998. On the best evolutionary rate for phylogenetic analysis. Systematic Biology 47: 125-133.
    • (1998) Systematic Biology , vol.47 , pp. 125-133
    • Yang, Z.1
  • 98
    • 0028267146 scopus 로고
    • Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation
    • YANG, Z., N. GOLDMAN, AND A. FRIDAY. 1994. Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation. Molecular Biology and Evolution 11: 316-324.
    • (1994) Molecular Biology and Evolution , vol.11 , pp. 316-324
    • Yang, Z.1    Goldman, N.2    Friday, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.