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Volumn 8, Issue 11, 2007, Pages

The global landscape of sequence diversity

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CELL COMMUNICATION; CELL DIFFERENTIATION; COMPARATIVE GENE MAPPING; EUKARYOTE; EXPRESSED SEQUENCE TAG; GENE SEQUENCE; GENETIC CONSERVATION; GENETIC VARIABILITY; INHERITANCE; METAZOON; MOLECULAR EVOLUTION; NONHUMAN; PHYLOGENY; PROKARYOTE; QUANTITATIVE ANALYSIS; SEQUENCE ANALYSIS; SPECIES DIFFERENCE; TAXON; ANIMAL; GENE DUPLICATION; GENOMICS; HUMAN; SEQUENCE ALIGNMENT;

EID: 46349085721     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2007-8-11-r238     Document Type: Article
Times cited : (12)

References (72)
  • 1
    • 33644851164 scopus 로고    scopus 로고
    • Fancy footwork in the sequence space shuffle
    • 10.1038/nbt0306-328 16525408
    • Arnold FH Fancy footwork in the sequence space shuffle. Nat Biotechnol 2006 24 328-330 10.1038/nbt0306-328 16525408
    • (2006) Nat Biotechnol , vol.24 , pp. 328-330
    • Arnold, F.H.1
  • 2
    • 0037841804 scopus 로고    scopus 로고
    • Evolution of the protein repertoire
    • 10.1126/science.1085371 12805536
    • Chothia C Gough J Vogel C Teichmann SA Evolution of the protein repertoire. Science 2003 300 1701-1703 10.1126/science.1085371 12805536
    • (2003) Science , vol.300 , pp. 1701-1703
    • Chothia, C.1    Gough, J.2    Vogel, C.3    Teichmann, S.A.4
  • 3
    • 0035161543 scopus 로고    scopus 로고
    • Genomes OnLine Database (GOLD): A monitor of genome projects world-wide
    • 29859 11125068 10.1093/nar/29.1.126
    • Bernal A Ear U Kyrpides N Genomes OnLine Database (GOLD): A monitor of genome projects world-wide. Nucleic Acids Res 2001 29 126-127 29859 11125068 10.1093/nar/29.1.126
    • (2001) Nucleic Acids Res , vol.29 , pp. 126-127
    • Bernal, A.1    Ear, U.2    Kyrpides, N.3
  • 6
    • 0043163718 scopus 로고    scopus 로고
    • Protein families and TRIBES in genome sequence space
    • 169885 12888524 10.1093/nar/gkg495
    • Enright AJ Kunin V Ouzounis CA Protein families and TRIBES in genome sequence space. Nucleic Acids Res 2003 31 4632-4638 169885 12888524 10.1093/nar/gkg495
    • (2003) Nucleic Acids Res , vol.31 , pp. 4632-4638
    • Enright, A.J.1    Kunin, V.2    Ouzounis, C.A.3
  • 7
    • 14544295684 scopus 로고    scopus 로고
    • Weighted genome trees: Refinements and applications
    • 545607 15687194 10.1128/JB.187.4.1305-1316.2005
    • Gophna U Doolittle WF Charlebois RL Weighted genome trees: Refinements and applications. J Bacteriol 2005 187 1305-1316 545607 15687194 10.1128/ JB.187.4.1305-1316.2005
    • (2005) J Bacteriol , vol.187 , pp. 1305-1316
    • Gophna, U.1    Doolittle, W.F.2    Charlebois, R.L.3
  • 8
    • 20444407674 scopus 로고    scopus 로고
    • Consistency of genome-based methods in measuring Metazoan evolution
    • 10.1016/j.febslet.2005.04.006 15943981
    • Zdobnov EM von Mering C Letunic I Bork P Consistency of genome-based methods in measuring Metazoan evolution. FEBS Lett 2005 579 3355-3361 10.1016/j.febslet.2005.04.006 15943981
    • (2005) FEBS Lett , vol.579 , pp. 3355-3361
    • Zdobnov, E.M.1    von Mering, C.2    Letunic, I.3    Bork, P.4
  • 10
    • 1842411320 scopus 로고    scopus 로고
    • Crystal structure of the nucleosome core particle at 2.8 A resolution
    • 10.1038/38444 9305837
    • Luger K Mader AW Richmond RK Sargent DF Richmond TJ Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature 1997 389 251-260 10.1038/38444 9305837
    • (1997) Nature , vol.389 , pp. 251-260
    • Luger, K.1    Mader, A.W.2    Richmond, R.K.3    Sargent, D.F.4    Richmond, T.J.5
  • 11
    • 0032499698 scopus 로고    scopus 로고
    • The universal ancestor
    • 22660 9618502 10.1073/pnas.95.12.6854
    • Woese C The universal ancestor. Proc Natl Acad Sci USA 1998 95 6854-6859 22660 9618502 10.1073/pnas.95.12.6854
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 6854-6859
    • Woese, C.1
  • 12
    • 0031020765 scopus 로고    scopus 로고
    • Protein evolution. How far can sequences diverge?
    • 10.1038/385579a0 9024652
    • Chothia C Gerstein M Protein evolution. How far can sequences diverge? Nature 1997 385 579-581 10.1038/385579a0 9024652
    • (1997) Nature , vol.385 , pp. 579-581
    • Chothia, C.1    Gerstein, M.2
  • 13
    • 0032871834 scopus 로고    scopus 로고
    • Finding families for genomic ORFans
    • 10.1093/bioinformatics/15.9.759 10498776
    • Fischer D Eisenberg D Finding families for genomic ORFans. Bioinformatics 1999 15 759-762 10.1093/bioinformatics/15.9.759 10498776
    • (1999) Bioinformatics , vol.15 , pp. 759-762
    • Fischer, D.1    Eisenberg, D.2
  • 14
    • 3042569657 scopus 로고    scopus 로고
    • Bacterial genomes as new gene homes: The genealogy of ORFans in E. coli
    • 419781 15173110 10.1101/gr.2231904
    • Daubin V Ochman H Bacterial genomes as new gene homes: The genealogy of ORFans in E. coli. Genome Res 2004 14 1036-1042 419781 15173110 10.1101/ gr.2231904
    • (2004) Genome Res , vol.14 , pp. 1036-1042
    • Daubin, V.1    Ochman, H.2
  • 15
    • 10944248427 scopus 로고    scopus 로고
    • Computing prokaryotic gene ubiquity: Rescuing the core from extinction
    • 534671 15574825 10.1101/gr.3024704
    • Charlebois RL Doolittle WF Computing prokaryotic gene ubiquity: Rescuing the core from extinction. Genome Res 2004 14 2469-2477 534671 15574825 10.1101/gr.3024704
    • (2004) Genome Res , vol.14 , pp. 2469-2477
    • Charlebois, R.L.1    Doolittle, W.F.2
  • 16
    • 0037352585 scopus 로고    scopus 로고
    • The genetic core of the universal ancestor
    • 430263 12618371 10.1101/gr.652803
    • Harris JK Kelley ST Spiegelman GB Pace NR The genetic core of the universal ancestor. Genome Res 2003 13 407-412 430263 12618371 10.1101/ gr.652803
    • (2003) Genome Res , vol.13 , pp. 407-412
    • Harris, J.K.1    Kelley, S.T.2    Spiegelman, G.B.3    Pace, N.R.4
  • 17
    • 0141815541 scopus 로고    scopus 로고
    • Analysis of singleton ORFans in fully sequenced microbial genomes
    • 10.1002/prot.10423 14517975
    • Siew N Fischer D Analysis of singleton ORFans in fully sequenced microbial genomes. Proteins 2003 53 241-251 10.1002/prot.10423 14517975
    • (2003) Proteins , vol.53 , pp. 241-251
    • Siew, N.1    Fischer, D.2
  • 18
    • 18244380086 scopus 로고    scopus 로고
    • Examining bacterial species under the specter of gene transfer and exchange
    • 1131874 15851673 10.1073/pnas.0502035102
    • Ochman H Lerat E Daubin V Examining bacterial species under the specter of gene transfer and exchange. Proc Natl Acad Sci USA 2005 102 Suppl 1 6595-6599 1131874 15851673 10.1073/pnas.0502035102
    • (2005) Proc Natl Acad Sci USA , vol.102 , Issue.SUPPL. 1 , pp. 6595-6599
    • Ochman, H.1    Lerat, E.2    Daubin, V.3
  • 19
    • 3242880088 scopus 로고    scopus 로고
    • Opinion piece. Genome sequencing: Time to widen our horizons
    • 10.1093/bfgp/1.1.7 15251062
    • Blaxter M Opinion piece. Genome sequencing: Time to widen our horizons. Brief Funct Genomic Proteomic 2002 1 7-9 10.1093/bfgp/1.1.7 15251062
    • (2002) Brief Funct Genomic Proteomic , vol.1 , pp. 7-9
    • Blaxter, M.1
  • 22
    • 0037680163 scopus 로고    scopus 로고
    • Expressed sequence tag survey of gene expression in the scab mite Psoroptes ovis - Allergens, proteases and free-radical scavengers
    • 10.1017/S0031182003003044 12793649
    • Kenyon F Welsh M Parkinson J Whitton C Blaxter ML Knox DP Expressed sequence tag survey of gene expression in the scab mite Psoroptes ovis - allergens, proteases and free-radical scavengers. Parasitology 2003 126 451-460 10.1017/S0031182003003044 12793649
    • (2003) Parasitology , vol.126 , pp. 451-460
    • Kenyon, F.1    Welsh, M.2    Parkinson, J.3    Whitton, C.4    Blaxter, M.L.5    Knox, D.P.6
  • 23
    • 0038610837 scopus 로고    scopus 로고
    • Origin and evolutionary process of the CNS elucidated by comparative genomics analysis of planarian ESTs
    • 164645 12802012 10.1073/pnas.1332513100
    • Mineta K Nakazawa M Cebria F Ikeo K Agata K Gojobori T Origin and evolutionary process of the CNS elucidated by comparative genomics analysis of planarian ESTs. Proc Natl Acad Sci USA 2003 100 7666-7671 164645 12802012 10.1073/pnas.1332513100
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 7666-7671
    • Mineta, K.1    Nakazawa, M.2    Cebria, F.3    Ikeo, K.4    Agata, K.5    Gojobori, T.6
  • 27
    • 46349100774 scopus 로고    scopus 로고
    • Global Analysis of Sequence Diversity
    • Global Analysis of Sequence Diversity http://www.compsysbio.org/GASD
  • 28
    • 0037223416 scopus 로고    scopus 로고
    • Myriads of protein families, and still counting
    • 151299 12620116 10.1186/gb-2003-4-2-401
    • Kunin V Cases I Enright AJ de Lorenzo V Ouzounis CA Myriads of protein families, and still counting. Genome Biol 2003 4 401 151299 12620116 10.1186/gb-2003-4-2-401
    • (2003) Genome Biol , vol.4 , pp. 401
    • Kunin, V.1    Cases, I.2    Enright, A.J.3    de Lorenzo, V.4    Ouzounis, C.A.5
  • 29
    • 12544255323 scopus 로고    scopus 로고
    • The real 'kingdoms' of eukaryotes
    • 10.1016/j.cub.2004.08.038 15341755
    • Simpson AG Roger AJ The real 'kingdoms' of eukaryotes. Curr Biol 2004 14 R693-696 10.1016/j.cub.2004.08.038 15341755
    • (2004) Curr Biol , vol.14
    • Simpson, A.G.1    Roger, A.J.2
  • 30
    • 1542272747 scopus 로고    scopus 로고
    • Comparative genomics, minimal gene-sets and the last universal common ancestor
    • 10.1038/nrmicro751 15035042
    • Koonin EV Comparative genomics, minimal gene-sets and the last universal common ancestor. Nat Rev Microbiol 2003 1 127-136 10.1038/nrmicro751 15035042
    • (2003) Nat Rev Microbiol , vol.1 , pp. 127-136
    • Koonin, E.V.1
  • 31
    • 0042594458 scopus 로고    scopus 로고
    • COmplete GENome Tracking (COGENT): A flexible data environment for computational genomics
    • 10.1093/bioinformatics/btg161 12874064
    • Janssen P Enright AJ Audit B Cases I Goldovsky L Harte N Kunin V Ouzounis CA COmplete GENome Tracking (COGENT): A flexible data environment for computational genomics. Bioinformatics 2003 19 1451-1452 10.1093/bioinformatics/btg161 12874064
    • (2003) Bioinformatics , vol.19 , pp. 1451-1452
    • Janssen, P.1    Enright, A.J.2    Audit, B.3    Cases, I.4    Goldovsky, L.5    Harte, N.6    Kunin, V.7    Ouzounis, C.A.8
  • 32
    • 46349098562 scopus 로고    scopus 로고
    • The NCBI Taxonomy Homepage http://www.ncbi.nlm.nih.gov/Taxonomy/ taxonomyhome.html/
  • 33
    • 33749554389 scopus 로고    scopus 로고
    • The evolutionary origin of Xanthomonadales genomes and the nature of the horizontal gene transfer process
    • 10.1093/molbev/msl075 16882701
    • Comas I Moya A Azad RK Lawrence JG Gonzalez-Candelas F The evolutionary origin of Xanthomonadales genomes and the nature of the horizontal gene transfer process. Mol Biol Evol 2006 23 2049-2057 10.1093/molbev/msl075 16882701
    • (2006) Mol Biol Evol , vol.23 , pp. 2049-2057
    • Comas, I.1    Moya, A.2    Azad, R.K.3    Lawrence, J.G.4    Gonzalez-Candelas, F.5
  • 34
    • 0034682335 scopus 로고    scopus 로고
    • Lateral gene transfer and the nature of bacterial innovation
    • 10.1038/35012500 10830951
    • Ochman H Lawrence JG Groisman EA Lateral gene transfer and the nature of bacterial innovation. Nature 2000 405 299-304 10.1038/35012500 10830951
    • (2000) Nature , vol.405 , pp. 299-304
    • Ochman, H.1    Lawrence, J.G.2    Groisman, E.A.3
  • 35
    • 33748277982 scopus 로고    scopus 로고
    • Phylogenetic analyses of cyanobacterial genomes: Quantification of horizontal gene transfer events
    • 1557764 16899658 10.1101/gr.5322306
    • Zhaxybayeva O Gogarten JP Charlebois RL Doolittle WF Papke RT Phylogenetic analyses of cyanobacterial genomes: Quantification of horizontal gene transfer events. Genome Res 2006 16 1099-1108 1557764 16899658 10.1101/gr.5322306
    • (2006) Genome Res , vol.16 , pp. 1099-1108
    • Zhaxybayeva, O.1    Gogarten, J.P.2    Charlebois, R.L.3    Doolittle, W.F.4    Papke, R.T.5
  • 36
    • 7444237566 scopus 로고    scopus 로고
    • The timing of eukaryotic evolution: Does a relaxed molecular clock reconcile proteins and fossils?
    • 524432 15494441 10.1073/pnas.0403984101
    • Douzery EJ Snell EA Bapteste E Delsuc F Philippe H The timing of eukaryotic evolution: Does a relaxed molecular clock reconcile proteins and fossils? Proc Natl Acad Sci USA 2004 101 15386-15391 524432 15494441 10.1073/pnas.0403984101
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 15386-15391
    • Douzery, E.J.1    Snell, E.A.2    Bapteste, E.3    Delsuc, F.4    Philippe, H.5
  • 37
    • 2942568227 scopus 로고    scopus 로고
    • A molecular timescale of eukaryote evolution and the rise of complex multicellular life
    • 341452 15005799 10.1186/1471-2148-4-2
    • Hedges SB Blair JE Venturi ML Shoe JL A molecular timescale of eukaryote evolution and the rise of complex multicellular life. BMC Evol Biol 2004 4 2 341452 15005799 10.1186/1471-2148-4-2
    • (2004) BMC Evol Biol , vol.4 , pp. 2
    • Hedges, S.B.1    Blair, J.E.2    Venturi, M.L.3    Shoe, J.L.4
  • 39
    • 1942501957 scopus 로고    scopus 로고
    • The colonization of land by animals: Molecular phylogeny and divergence times among arthropods
    • 333434 14731304 10.1186/1741-7007-2-1
    • Pisani D Poling LL Lyons-Weiler M Hedges SB The colonization of land by animals: Molecular phylogeny and divergence times among arthropods. BMC Biol 2004 2 1 333434 14731304 10.1186/1741-7007-2-1
    • (2004) BMC Biol , vol.2 , pp. 1
    • Pisani, D.1    Poling, L.L.2    Lyons-Weiler, M.3    Hedges, S.B.4
  • 40
    • 21144441817 scopus 로고    scopus 로고
    • Lateral gene transfer in eukaryotes
    • 10.1007/s00018-005-4539-z 15761667
    • Andersson JO Lateral gene transfer in eukaryotes. Cell Mol Life Sci 2005 62 1182-1197 10.1007/s00018-005-4539-z 15761667
    • (2005) Cell Mol Life Sci , vol.62 , pp. 1182-1197
    • Andersson, J.O.1
  • 41
    • 20444453307 scopus 로고    scopus 로고
    • Protein length in eukaryotic and prokaryotic proteomes
    • 1150220 15951512 10.1093/nar/gki615
    • Brocchieri L Karlin S Protein length in eukaryotic and prokaryotic proteomes. Nucleic Acids Res 2005 33 3390-3400 1150220 15951512 10.1093/ nar/gki615
    • (2005) Nucleic Acids Res , vol.33 , pp. 3390-3400
    • Brocchieri, L.1    Karlin, S.2
  • 43
    • 0027308854 scopus 로고
    • Body size, metabolic rate, generation time, and the molecular clock
    • 46451 8483925 10.1073/pnas.90.9.4087
    • Martin AP Palumbi SR Body size, metabolic rate, generation time, and the molecular clock. Proc Natl Acad Sci USA 1993 90 4087-4091 46451 8483925 10.1073/pnas.90.9.4087
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 4087-4091
    • Martin, A.P.1    Palumbi, S.R.2
  • 44
    • 34248179124 scopus 로고    scopus 로고
    • The role of laterally transferred genes in adaptive evolution
    • 1796617
    • Marri PR Hao W Golding GB The role of laterally transferred genes in adaptive evolution. BMC Evol Biol 2007 7 Suppl 1 S8 1796617 17288581 10.1186/1471-2148-7-S1-S8
    • (2007) BMC Evol Biol , vol.7 , Issue.SUPPL. 1
    • Marri, P.R.1    Hao, W.2    Golding, G.B.3
  • 47
    • 15544389841 scopus 로고    scopus 로고
    • Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution
    • 1449125 15654095 10.1534/genetics.104.037051
    • He X Zhang J Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution. Genetics 2005 169 1157-1164 1449125 15654095 10.1534/genetics.104.037051
    • (2005) Genetics , vol.169 , pp. 1157-1164
    • He, X.1    Zhang, J.2
  • 48
    • 8644224924 scopus 로고    scopus 로고
    • Genomic changes following host restriction in bacteria
    • 10.1016/j.gde.2004.09.003 15531157
    • Moran NA Plague GR Genomic changes following host restriction in bacteria. Curr Opin Genet Dev 2004 14 627-633 10.1016/j.gde.2004.09.003 15531157
    • (2004) Curr Opin Genet Dev , vol.14 , pp. 627-633
    • Moran, N.A.1    Plague, G.R.2
  • 49
    • 0037383240 scopus 로고    scopus 로고
    • Genomic clocks and evolutionary timescales
    • 10.1016/S0168-9525(03)00053-2 12683973
    • Blair Hedges S Kumar S Genomic clocks and evolutionary timescales. Trends Genet 2003 19 200-206 10.1016/S0168-9525(03)00053-2 12683973
    • (2003) Trends Genet , vol.19 , pp. 200-206
    • Blair Hedges, S.1    Kumar, S.2
  • 50
    • 0000685226 scopus 로고
    • The molecular clock and the relationship between population size and generation time
    • 10.2307/2410082
    • Chao L Carr D The molecular clock and the relationship between population size and generation time. Evolution 1993 47 688-690 10.2307/ 2410082
    • (1993) Evolution , vol.47 , pp. 688-690
    • Chao, L.1    Carr, D.2
  • 51
    • 0014671880 scopus 로고
    • Rate of fixation of nucleotide substitutions in evolution
    • 10.1038/224149a0 5343515
    • Laird CD McConaughy BL McCarthy BJ Rate of fixation of nucleotide substitutions in evolution. Nature 1969 224 149-154 10.1038/224149a0 5343515
    • (1969) Nature , vol.224 , pp. 149-154
    • Laird, C.D.1    McConaughy, B.L.2    McCarthy, B.J.3
  • 52
    • 29344470071 scopus 로고    scopus 로고
    • Evolution. Is the "Big Bang" in animal evolution real?
    • 10.1126/science.1122440 16373562
    • Jermiin LS Poladian L Charleston MA Evolution. Is the "Big Bang" in animal evolution real? Science 2005 310 1910-1911 10.1126/ science.1122440 16373562
    • (2005) Science , vol.310 , pp. 1910-1911
    • Jermiin, L.S.1    Poladian, L.2    Charleston, M.A.3
  • 53
    • 33846625056 scopus 로고    scopus 로고
    • Recombination and the nature of bacterial speciation
    • 10.1126/science.1127573 17255503
    • Fraser C Hanage WP Spratt BG Recombination and the nature of bacterial speciation. Science 2007 315 476-480 10.1126/science.1127573 17255503
    • (2007) Science , vol.315 , pp. 476-480
    • Fraser, C.1    Hanage, W.P.2    Spratt, B.G.3
  • 54
    • 11844288987 scopus 로고    scopus 로고
    • The rate of DNA evolution: Effects of body size and temperature on the molecular clock
    • 544068 15618408 10.1073/pnas.0407735101
    • Gillooly JF Allen AP West GB Brown JH The rate of DNA evolution: Effects of body size and temperature on the molecular clock. Proc Natl Acad Sci USA 2005 102 140-145 544068 15618408 10.1073/pnas.0407735101
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 140-145
    • Gillooly, J.F.1    Allen, A.P.2    West, G.B.3    Brown, J.H.4
  • 56
    • 4444353678 scopus 로고    scopus 로고
    • Phylogenetic reconstruction and lateral gene transfer
    • 10.1016/j.tim.2004.07.002 15337161
    • Bapteste E Boucher Y Leigh J Doolittle WF Phylogenetic reconstruction and lateral gene transfer. Trends Microbiol 2004 12 406-411 10.1016/ j.tim.2004.07.002 15337161
    • (2004) Trends Microbiol , vol.12 , pp. 406-411
    • Bapteste, E.1    Boucher, Y.2    Leigh, J.3    Doolittle, W.F.4
  • 57
    • 10644271631 scopus 로고    scopus 로고
    • Archaeal genetics - The third way
    • 10.1038/nrg1504 15630422
    • Allers T Mevarech M Archaeal genetics - the third way. Nat Rev Genet 2005 6 58 73 10.1038/nrg1504 15630422
    • (2005) Nat Rev Genet , vol.6 , pp. 58-73
    • Allers, T.1    Mevarech, M.2
  • 60
    • 16844382374 scopus 로고    scopus 로고
    • Pancrustacean phylogeny: Hexapods are terrestrial crustaceans and maxillopods are not monophyletic
    • 1634985 15734694 10.1098/rspb.2004.2917
    • Regier JC Shultz JW Kambic RE Pancrustacean phylogeny: Hexapods are terrestrial crustaceans and maxillopods are not monophyletic. Proc Biol Sci 2005 272 395-401 1634985 15734694 10.1098/rspb.2004.2917
    • (2005) Proc Biol Sci , vol.272 , pp. 395-401
    • Regier, J.C.1    Shultz, J.W.2    Kambic, R.E.3
  • 61
    • 0034712915 scopus 로고    scopus 로고
    • Evolution of the chordate body plan: New insights from phylogenetic analyses of deuterostome phyla
    • 18258 10781046 10.1073/pnas.97.9.4469
    • Cameron CB Garey JR Swalla BJ Evolution of the chordate body plan: New insights from phylogenetic analyses of deuterostome phyla. Proc Natl Acad Sci USA 2000 97 4469-4474 18258 10781046 10.1073/pnas.97.9.4469
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 4469-4474
    • Cameron, C.B.1    Garey, J.R.2    Swalla, B.J.3
  • 62
    • 0036097948 scopus 로고    scopus 로고
    • Evaluating hypotheses of deuterostome phylogeny and chordate evolution with new LSU and SSU ribosomal DNA data
    • 11961109
    • Winchell CJ Sullivan J Cameron CB Swalla BJ Mallatt J Evaluating hypotheses of deuterostome phylogeny and chordate evolution with new LSU and SSU ribosomal DNA data. Mol Biol Evol 2002 19 762-776 11961109
    • (2002) Mol Biol Evol , vol.19 , pp. 762-776
    • Winchell, C.J.1    Sullivan, J.2    Cameron, C.B.3    Swalla, B.J.4    Mallatt, J.5
  • 64
    • 17744386162 scopus 로고    scopus 로고
    • Multigene analyses of bilaterian animals corroborate the monophyly of Ecdysozoa, Lophotrochozoa, and Protostomia
    • 10.1093/molbev/msi111 15703236
    • Philippe H Lartillot N Brinkmann H Multigene analyses of bilaterian animals corroborate the monophyly of Ecdysozoa, Lophotrochozoa, and Protostomia. Mol Biol Evol 2005 22 1246-1253 10.1093/molbev/msi111 15703236
    • (2005) Mol Biol Evol , vol.22 , pp. 1246-1253
    • Philippe, H.1    Lartillot, N.2    Brinkmann, H.3
  • 65
    • 0345874732 scopus 로고    scopus 로고
    • Coelomata and not Ecdysozoa: Evidence from genome-wide phylogenetic analysis
    • 314272 14707168 10.1101/gr.1347404
    • Wolf YI Rogozin IB Koonin EV Coelomata and not Ecdysozoa: Evidence from genome-wide phylogenetic analysis. Genome Res 2004 14 29-36 314272 14707168 10.1101/gr.1347404
    • (2004) Genome Res , vol.14 , pp. 29-36
    • Wolf, Y.I.1    Rogozin, I.B.2    Koonin, E.V.3
  • 66
    • 17844406375 scopus 로고    scopus 로고
    • Evolutionary biology: Animal roots and shoots
    • 10.1038/4341076a 15858555
    • Jones M Blaxter M Evolutionary biology: Animal roots and shoots. Nature 2005 434 1076 1077 10.1038/4341076a 15858555
    • (2005) Nature , vol.434 , pp. 1076-1077
    • Jones, M.1    Blaxter, M.2
  • 67
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • 146917 9254694 10.1093/nar/25.17.3389
    • Altschul SF Madden TL Schaffer AA Zhang J Zhang Z Miller W Lipman DJ Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res 1997 25 3389-3402 146917 9254694 10.1093/nar/ 25.17.3389
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schaffer, A.A.3    Zhang, J.4    Zhang, Z.5    Miller, W.6    Lipman, D.J.7
  • 68
    • 46349100304 scopus 로고    scopus 로고
    • PostgreSQL http://www.postgresql.org
  • 69
    • 0033551248 scopus 로고    scopus 로고
    • Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles
    • 16324 10200254 10.1073/pnas.96.8.4285
    • Pellegrini M Marcotte EM Thompson MJ Eisenberg D Yeates TO Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles. Proc Natl Acad Sci USA 1999 96 4285-4288 16324 10200254 10.1073/pnas.96.8.4285
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 4285-4288
    • Pellegrini, M.1    Marcotte, E.M.2    Thompson, M.J.3    Eisenberg, D.4    Yeates, T.O.5
  • 70
    • 0036529479 scopus 로고    scopus 로고
    • An efficient algorithm for large-scale detection of protein families
    • 101833 11917018 10.1093/nar/30.7.1575
    • Enright AJ Van Dongen S Ouzounis CA An efficient algorithm for large-scale detection of protein families. Nucleic Acids Res 2002 30 1575-1584 101833 11917018 10.1093/nar/30.7.1575
    • (2002) Nucleic Acids Res , vol.30 , pp. 1575-1584
    • Enright, A.J.1    Van Dongen, S.2    Ouzounis, C.A.3
  • 72
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto encyclopedia of genes and genomes
    • 102409 10592173 10.1093/nar/28.1.27
    • Kanehisa M Goto S KEGG: Kyoto encyclopedia of genes and genomes. Nucleic Acids Res 2000 28 27-30 102409 10592173 10.1093/nar/28.1.27
    • (2000) Nucleic Acids Res , vol.28 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.