-
1
-
-
2942546738
-
-
Charlebois,R.L. (ed.), ASM Press, Washington, DC
-
Galperin,M.Y., Tatusov,R.L. and Koonin,E.V. (1999) In Charlebois,R.L. (ed.), Organization of the Prokaryotic Genome ASM Press, Washington, DC.
-
(1999)
Organization of the Prokaryotic Genome
-
-
Galperin, M.Y.1
Tatusov, R.L.2
Koonin, E.V.3
-
2
-
-
0034161476
-
Protein-length distributions for the three domains of life
-
Zhang,J. (2000) Protein-length distributions for the three domains of life. Trends Genet., 16, 107-109.
-
(2000)
Trends Genet.
, vol.16
, pp. 107-109
-
-
Zhang, J.1
-
3
-
-
0035233369
-
A comparative genomics approach for studying ancestral proteins and evolution
-
Liang,P. and Riley,M. (2001) A comparative genomics approach for studying ancestral proteins and evolution. Adv. Appl. Microbiol., 50, 39-72.
-
(2001)
Adv. Appl. Microbiol.
, vol.50
, pp. 39-72
-
-
Liang, P.1
Riley, M.2
-
4
-
-
0035424711
-
On the total number of genes and their length distribution in complete microbial genomes
-
Skovgaard,M., Jensen,L.J., Brunak,S., Ussery,D. and Krogh,A. (2001) On the total number of genes and their length distribution in complete microbial genomes. Trends Genet. 17, 425-428.
-
(2001)
Trends Genet.
, vol.17
, pp. 425-428
-
-
Skovgaard, M.1
Jensen, L.J.2
Brunak, S.3
Ussery, D.4
Krogh, A.5
-
5
-
-
0036593492
-
Heterogeneity of genome and proteome content in bacteria, archaea, and eukaryotes
-
Karlin,S., Brocchieri,L., Trent,J., Blaisdell,B.E. and Mrazek,J. (2002) Heterogeneity of genome and proteome content in bacteria, archaea, and eukaryotes. Theor. Popul. Biol., 61, 367-390.
-
(2002)
Theor. Popul. Biol.
, vol.61
, pp. 367-390
-
-
Karlin, S.1
Brocchieri, L.2
Trent, J.3
Blaisdell, B.E.4
Mrazek, J.5
-
6
-
-
0037019808
-
Amino acid composition of genomes, lifestyles of organisms, and evolutionary trends: A global picture with correspondence analysis
-
Tekaia,F., Yeramian,E. and Dujon,B. (2002) Amino acid composition of genomes, lifestyles of organisms, and evolutionary trends: A global picture with correspondence analysis. Gene, 297, 51-60.
-
(2002)
Gene
, vol.297
, pp. 51-60
-
-
Tekaia, F.1
Yeramian, E.2
Dujon, B.3
-
7
-
-
0035148851
-
Size comparisons among integral membrane transport protein homologues in bacteria, Archaea, and Eucarya
-
Chung,Y.J., Krueger,C., Metzgar,D. and Saier,M.H.,Jr (2001) Size comparisons among integral membrane transport protein homologues in bacteria, Archaea, and Eucarya. J. Bacteriol., 183, 1012-1021.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 1012-1021
-
-
Chung, Y.J.1
Krueger, C.2
Metzgar, D.3
Saier Jr., M.H.4
-
8
-
-
0031021210
-
Biology's new Rosetta stone
-
Das,S., Yu,L., Gaitatzes,C., Rogers,R., Freeman,J., Bienkowska,J., Adams,R.M., Smith,T.F. and Lindelien,J. (1997) Biology's new Rosetta stone. Nature, 385, 29-30.
-
(1997)
Nature
, vol.385
, pp. 29-30
-
-
Das, S.1
Yu, L.2
Gaitatzes, C.3
Rogers, R.4
Freeman, J.5
Bienkowska, J.6
Adams, R.M.7
Smith, T.F.8
Lindelien, J.9
-
9
-
-
0347568598
-
The relationship of protein conservation and sequence length
-
Lipman,D.J., Souvorov,A., Koonin,E.V. and Pachenko,A.R. (2002) The relationship of protein conservation and sequence length. BMC Evol. Biol., 2, 20-29.
-
(2002)
BMC Evol. Biol.
, vol.2
, pp. 20-29
-
-
Lipman, D.J.1
Souvorov, A.2
Koonin, E.V.3
Pachenko, A.R.4
-
10
-
-
0036790007
-
Microbial genome evolution: Sources of variability
-
Mira,A., Klasson,L. and Andersson,S.G. (2002) Microbial genome evolution: Sources of variability. Curr. Opin. Microbiol., 5 506-512.
-
(2002)
Curr. Opin. Microbiol.
, vol.5
, pp. 506-512
-
-
Mira, A.1
Klasson, L.2
Andersson, S.G.3
-
11
-
-
0036640957
-
Distinguishing the ORFs from the ELFs: Short bacterial genes and the annotation of genomes
-
Ochman,H. (2002) Distinguishing the ORFs from the ELFs: Short bacterial genes and the annotation of genomes. Trends Genet., 18, 335-337.
-
(2002)
Trends Genet.
, vol.18
, pp. 335-337
-
-
Ochman, H.1
-
12
-
-
18444402182
-
The Ensembl genome database project
-
Hubbard,T., Barker,D., Birney,E., Cameron,G., Chen,Y., Clark,L., Cox,T., Cuff,J., Curwen,V., Down,T. et al. (2002) The Ensembl genome database project. Nucleic Acids Res., 30, 38-41.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 38-41
-
-
Hubbard, T.1
Barker, D.2
Birney, E.3
Cameron, G.4
Chen, Y.5
Clark, L.6
Cox, T.7
Cuff, J.8
Curwen, V.9
Down, T.10
-
13
-
-
0030660581
-
A genomic perspective on protein families
-
Tatusov,R.L., Koonin,E.V. and Lipman,D.J. (1997) A genomic perspective on protein families. Science, 278, 631-637.
-
(1997)
Science
, vol.278
, pp. 631-637
-
-
Tatusov, R.L.1
Koonin, E.V.2
Lipman, D.J.3
-
14
-
-
0035162592
-
The COG database: New developments in phylogenetic classification of proteins from complete genomes
-
Tatusov,R.L., Natale,D.A., Garkavtsev,I.V., Tatusova,T.A., Shankavaram,U.T., Rao,B.S., Kiryutin,B., Galperin,M.Y., Fedorova,N.D. and Koonin,E.V. (2001) The COG database: New developments in phylogenetic classification of proteins from complete genomes. Nucleic Acids Res., 29, 22-28.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 22-28
-
-
Tatusov, R.L.1
Natale, D.A.2
Garkavtsev, I.V.3
Tatusova, T.A.4
Shankavaram, U.T.5
Rao, B.S.6
Kiryutin, B.7
Galperin, M.Y.8
Fedorova, N.D.9
Koonin, E.V.10
-
15
-
-
0011542799
-
The Pfam protein families database
-
Bateman,A., Birney,E., Cerruti,L., Durbin,R., Etwiller,L., Eddy,S.R., Griffiths-Jones,S., Howe,K.L., Marshall,M. and Sonnhammer,E.L. (2002) The Pfam protein families database. Nucleic Acids Res., 30, 276-280.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 276-280
-
-
Bateman, A.1
Birney, E.2
Cerruti, L.3
Durbin, R.4
Etwiller, L.5
Eddy, S.R.6
Griffiths-Jones, S.7
Howe, K.L.8
Marshall, M.9
Sonnhammer, E.L.10
-
16
-
-
0033976458
-
The Pfam protein families database
-
Bateman,A., Birney,E., Durbin,R., Eddy,S.R., Howe,K.L. and Sonnhammer,E.L. (2000) The Pfam protein families database. Nucleic Acids Res., 28, 263-266.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 263-266
-
-
Bateman, A.1
Birney, E.2
Durbin, R.3
Eddy, S.R.4
Howe, K.L.5
Sonnhammer, E.L.6
-
17
-
-
9144257886
-
The Pfam protein families database
-
Bateman,A., Coin,L., Durbin,R., Finn,R.D., Hollich,V., Griffiths-Jones,S., Khanna,A., Marshall,M., Moxon,S., Sonnhammer,E.L. et al. (2004) The Pfam protein families database. Nucleic Acids Res., 32, D138-D141.
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Bateman, A.1
Coin, L.2
Durbin, R.3
Finn, R.D.4
Hollich, V.5
Griffiths-Jones, S.6
Khanna, A.7
Marshall, M.8
Moxon, S.9
Sonnhammer, E.L.10
-
18
-
-
0030623398
-
An inverse correlation between loop length and stability in a four-helix-bundle protein
-
Nagi,A.D. and Regan,L. (1997) An inverse correlation between loop length and stability in a four-helix-bundle protein. Fold. Des., 2, 67-75.
-
(1997)
Fold. Des.
, vol.2
, pp. 67-75
-
-
Nagi, A.D.1
Regan, L.2
-
19
-
-
0030741375
-
The crystal structure of citrate synthase from the hyperthermophilic archaeon Pyrococcus furiosus at 1.9 Å resolution
-
Russell,R.J., Ferguson,J.M., Hough,D.W., Danson,M.J. and Taylor,G.L. (1997) The crystal structure of citrate synthase from the hyperthermophilic archaeon Pyrococcus furiosus at 1.9 Å resolution. Biochemistry, 36, 9983-9994.
-
(1997)
Biochemistry
, vol.36
, pp. 9983-9994
-
-
Russell, R.J.1
Ferguson, J.M.2
Hough, D.W.3
Danson, M.J.4
Taylor, G.L.5
-
20
-
-
0033538553
-
Transproteomic evidence of a loop-deletion mechanism for enhancing protein thermostability
-
Thompson,M.J. and Eisenberg,D. (1999) Transproteomic evidence of a loop-deletion mechanism for enhancing protein thermostability. J. Mol. Biol., 290, 595-604.
-
(1999)
J. Mol. Biol.
, vol.290
, pp. 595-604
-
-
Thompson, M.J.1
Eisenberg, D.2
-
21
-
-
0034677790
-
Elucidation of determinants of protein stability through genome sequence analysis
-
Chakravarty,S. and Varadarajan,R. (2000) Elucidation of determinants of protein stability through genome sequence analysis. FEBS Lett., 470, 65-69.
-
(2000)
FEBS Lett.
, vol.470
, pp. 65-69
-
-
Chakravarty, S.1
Varadarajan, R.2
-
22
-
-
0034855858
-
How do thermophilic proteins deal with heat?
-
Kumar,S. and Nussinov,R. (2001) How do thermophilic proteins deal with heat? Cell. Mol. Life Sci., 58, 1216-1233.
-
(2001)
Cell. Mol. Life Sci.
, vol.58
, pp. 1216-1233
-
-
Kumar, S.1
Nussinov, R.2
-
23
-
-
0035098779
-
Hyperthermophilic enzymes: Sources, uses, and molecular mechanisms for thermostability
-
Vieille,C. and Zeikus,G.J. (2001) Hyperthermophilic enzymes: Sources, uses, and molecular mechanisms for thermostability. Microbiol. Mol. Biol. Rev., 65, 1-43.
-
(2001)
Microbiol. Mol. Biol. Rev.
, vol.65
, pp. 1-43
-
-
Vieille, C.1
Zeikus, G.J.2
-
24
-
-
0037133671
-
Metabolic efficiency and amino acid composition in the proteomes of Escherichia coli and Bacillus subtilis
-
Akashi,H. and Gojobori,T. (2002) Metabolic efficiency and amino acid composition in the proteomes of Escherichia coli and Bacillus subtilis. Proc. Natl Acad. Sci. USA, 99, 3695-3700.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 3695-3700
-
-
Akashi, H.1
Gojobori, T.2
-
25
-
-
0037308511
-
Cost-minimization of amino acid usage
-
Seligmann,H. (2003) Cost-minimization of amino acid usage. J. Mol. Evol., 56, 151-161.
-
(2003)
J. Mol. Evol.
, vol.56
, pp. 151-161
-
-
Seligmann, H.1
-
26
-
-
0018029597
-
The accumulation of deleterious genes in a population - Muller's Ratchet
-
Haigh,J. (1978) The accumulation of deleterious genes in a population - Muller's Ratchet. Theor. Popul. Biol., 14, 251-267.
-
(1978)
Theor. Popul. Biol.
, vol.14
, pp. 251-267
-
-
Haigh, J.1
|