Nanopore current transduction analysis of protein binding to non-terminal and terminal DNA regions: Analysis of transcription factor binding, retroviral DNA terminus dynamics, and retroviral integrase-DNA binding

BMC Bioinformatics

Volumn 8, Issue SUPPL. 7, 2007, Pages

  Winters Hilt, Stephen ^a,b   Davis, Amanda ^b   Amin, Iftekhar ^a   Morales, Eric ^b  

^a USA   (United States)

^b CHILDREN S HOSPITAL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CRYSTALLOGRAPHIC STUDIES; CURVATURE INFORMATION; DATA ANALYSIS METHODS; EFFECTIVE MECHANISMS; SEQUENCE-DEPENDENT; SYNTHETIC TRANSCRIPTION; TRANSCRIPTION FACTOR BINDING; TRANSCRIPTION FACTOR BINDING SITES;

BACTERIOPHAGES; BIOCHEMISTRY; DIAGNOSIS; EXPERIMENTS; INFORMATION SCIENCE; MOLECULES; NANOPORES; TRANSCRIPTION FACTORS; X RAY CRYSTALLOGRAPHY;

DNA;

APTAMER; DOUBLE STRANDED DNA; INTEGRASE; OLIGONUCLEOTIDE; TATA BINDING PROTEIN RELATED FACTOR; TRANSCRIPTION FACTOR; VIRUS DNA; NANOMATERIAL;

BIOINFORMATICS; CONFERENCE PAPER; CONSENSUS; CONTROLLED STUDY; DNA SEQUENCE; DNA STRUCTURE; HUMAN IMMUNODEFICIENCY VIRUS; NANOPORE; PROTEIN ANALYSIS; PROTEIN DNA BINDING; QUANTITATIVE ANALYSIS; SIGNAL TRANSDUCTION; SINGLE NUCLEOTIDE POLYMORPHISM; SUPPORT VECTOR MACHINE; X RAY CRYSTALLOGRAPHY; ALGORITHM; ARTICLE; BINDING SITE; CHEMISTRY; GENETICS; METHODOLOGY; POROSITY; PROTEIN BINDING; RETROVIRUS; SEQUENCE ANALYSIS;

ALGORITHMS; BINDING SITES; DNA, VIRAL; INTEGRASES; NANOSTRUCTURES; POROSITY; PROTEIN BINDING; PROTEIN INTERACTION MAPPING; RETROVIRIDAE; SEQUENCE ANALYSIS, DNA; SEQUENCE ANALYSIS, PROTEIN; TRANSCRIPTION FACTORS;

EID: 38549123996     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-8-S7-S10     Document Type: Conference Paper

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