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Volumn 8, Issue SUPPL. 7, 2007, Pages

Analysis of nanopore detector measurements using machine-learning methods, with application to single-molecule kinetic analysis

Author keywords

[No Author keywords available]

Indexed keywords

CLASSIFICATION PERFORMANCE; CLASSIFICATION RESULTS; HIDDEN MARKOV MODELS (HMMS); KINETIC PROPERTIES; MACHINE LEARNING TECHNIQUES; POTENTIAL DIFFERENCE; SUPPORT VECTOR MACHINE (SVMS); TRANSITION PROBABILITIES;

EID: 38549153363     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-8-S7-S12     Document Type: Conference Paper
Times cited : (13)

References (18)
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    • Winters-Hilt S Vercoutere W DeGuzman VS Deamer DW Akeson M Haussler D Highly Accurate Classification of Watson-Crick Basepairs on Termini of Single DNA Molecules Biophys J 2003 84 967-976 1302674 12547778
    • (2003) Biophys J , vol.84 , pp. 967-976
    • Winters-Hilt, S.1    Vercoutere, W.2    DeGuzman, V.S.3    Deamer, D.W.4    Akeson, M.5    Haussler, D.6
  • 2
    • 33947320566 scopus 로고    scopus 로고
    • Hidden Markov Model Variants and their Application
    • 1683574 17118135
    • Winters-Hilt S Hidden Markov Model Variants and their Application BMC Bioinformatics 2006 7 Suppl 2 S14 1683574 17118135
    • (2006) BMC Bioinformatics , vol.7 , Issue.SUPPL. 2
    • Winters-Hilt, S.1
  • 3
    • 38549178489 scopus 로고    scopus 로고
    • A novel, fast, HMM-with-Duration implementation - For application with a new, pattern recognition informed, nanopore detector
    • Baribault C Winters-Hilt S A novel, fast, HMM-with-Duration implementation - for application with a new, pattern recognition informed, nanopore detector BMC Bioinformatics 2007 8 Suppl 7 S19
    • (2007) BMC Bioinformatics , vol.8 , Issue.SUPPL. 7
    • Baribault, C.1    Winters-Hilt, S.2
  • 5
    • 33947319448 scopus 로고    scopus 로고
    • DNA Molecule Classification Using Feature Primitives
    • 1683559 17118136
    • Iqbal R Landry M Winters-Hilt S DNA Molecule Classification Using Feature Primitives BMC Bioinformatics 2006 7 Suppl 2 S15 1683559 17118136
    • (2006) BMC Bioinformatics , vol.7 , Issue.SUPPL. 2
    • Iqbal, R.1    Landry, M.2    Winters-Hilt, S.3
  • 8
    • 0035107270 scopus 로고    scopus 로고
    • Rapid discrimination among individual DNA hairpin molecules at single-nucleotide resolution using an ion channel
    • 11231558
    • Vercoutere W Winters-Hilt S Olsen H Deamer DW Haussler D Akeson M Rapid discrimination among individual DNA hairpin molecules at single-nucleotide resolution using an ion channel Nat Biotechnol 2001 19 3 248-252 11231558
    • (2001) Nat Biotechnol , vol.19 , Issue.3 , pp. 248-252
    • Vercoutere, W.1    Winters-Hilt, S.2    Olsen, H.3    Deamer, D.W.4    Haussler, D.5    Akeson, M.6
  • 10
    • 38549123996 scopus 로고    scopus 로고
    • Nanopore current transduction analysis of protein binding to non-terminal and terminal DNA regions: Analysis of transcription factor binding, retroviral DNA terminus dynamics, and retroviral integrase-DNA binding
    • Winters-Hilt S Davis A Amin I Morales E Nanopore current transduction analysis of protein binding to non-terminal and terminal DNA regions: analysis of transcription factor binding, retroviral DNA terminus dynamics, and retroviral integrase-DNA binding BMC Bioinformatics 2007 8 Suppl 7 S10
    • (2007) BMC Bioinformatics , vol.8 , Issue.SUPPL. 7
    • Winters-Hilt, S.1    Davis, A.2    Amin, I.3    Morales, E.4
  • 14
    • 27144489164 scopus 로고    scopus 로고
    • A tutorial on support vector machines for pattern recognition
    • Burges CJC A tutorial on support vector machines for pattern recognition Data Min Knowl Discov 1998 2 121-67
    • (1998) Data Min Knowl Discov , vol.2 , pp. 121-167
    • Burges, C.J.C.1
  • 15
    • 33947301110 scopus 로고    scopus 로고
    • Support Vector Machine Implementations for Classification & Clustering
    • 1683575 17118147
    • Winters-Hilt S Yelundur A McChesney C Landry M Support Vector Machine Implementations for Classification & Clustering BMC Bioinformatics 2006 7 Suppl 2 S4 1683575 17118147
    • (2006) BMC Bioinformatics , vol.7 , Issue.SUPPL. 2
    • Winters-Hilt, S.1    Yelundur, A.2    McChesney, C.3    Landry, M.4
  • 17
    • 0031334889 scopus 로고    scopus 로고
    • An improved training algorithm for support vector machines
    • IEEE, New York Principe J, Gile L, Morgan N, Wilson E
    • Osuna E Freund R Girosi F An improved training algorithm for support vector machines Neural Networks for Signal Processing VII IEEE, New York Principe J, Gile L, Morgan N, Wilson E 1997 276 85
    • (1997) Neural Networks for Signal Processing VII , pp. 276-285
    • Osuna, E.1    Freund, R.2    Girosi, F.3
  • 18
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    • Preliminary Nanopore Cheminformatics Analysis of Aptamer-Target Binding Strength
    • Thomson K Amin I Morales E Winters-Hilt S Preliminary Nanopore Cheminformatics Analysis of Aptamer-Target Binding Strength BMC Bioinformatics 2007 8 Suppl 7 S11
    • (2007) BMC Bioinformatics , vol.8 , Issue.SUPPL. 7
    • Thomson, K.1    Amin, I.2    Morales, E.3    Winters-Hilt, S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.