Acetaldehyde addition throughout the growth phase alleviates the phenotypic effect of zinc deficiency in Saccharomyces cerevisiae

Applied Microbiology and Biotechnology

Volumn 77, Issue 5, 2008, Pages 1093-1109

  Cheraiti, Naoufel ^a   Sauvage, François Xavier ^a   Salmon, Jean Michel ^a  

^a SPO   (France)

Author keywords

Acetaldehyde; Alcoholic fermentation; Anaerobiosis; Yeast; Zinc depletion

Indexed keywords

BIOMARKERS; FERMENTATION; GENE EXPRESSION; ORGANIC ACIDS; YEAST;

ALCOHOLIC FERMENTATION; NICOTINAMIDE ADENINE DINUCLEOTIDE (NAD); ZINC DEPLETION;

ZINC COMPOUNDS;

ACETALDEHYDE; NICOTINAMIDE ADENINE DINUCLEOTIDE; ZINC;

ACETALDEHYDE; ALCOHOL; ANAEROBIOSIS; COLONIZATION; EXPERIMENTAL STUDY; GENE EXPRESSION; GENETIC MARKER; GROWTH CURVE; PHENOTYPE; PROTEOMICS; YEAST; ZINC;

ADDITION REACTION; ARTICLE; COMPLEX FORMATION; FERMENTATION; GLYCOLYSIS; NONHUMAN; PHENOTYPE; PROTEOMICS; SACCHAROMYCES CEREVISIAE; UPREGULATION; ZINC DEFICIENCY;

ACETALDEHYDE; ALCOHOL DEHYDROGENASE; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; ETHANOL; FERMENTATION; GENE EXPRESSION PROFILING; NAD; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PROTEOME; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; ZINC;

SACCHAROMYCES; SACCHAROMYCES CEREVISIAE;

EID: 37249005904     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-007-1234-z     Document Type: Article

References (61)

1. Alexandre H, Ansanay-Galeote V, Dequin S, Blondin B (2001) Global gene expression during short-term ethanol stress in Saccharomyces cerevisiae. FEBS Lett 498:98-103
2. Andreasson C, Ljungdahl PO (2002) Receptor-mediated endoproteolytic activation of two transcription factors in yeast. Genes Dev 16:3158-3172
3. Aranda A, del Olmo M (2003) Response to acetaldehyde stress in the yeast Saccharomyces cerevisiae involves a strain-dependent regulation of several ALD genes and is mediated by the general stress response pathway. Yeast 20:747-759
4. Aranda A, Querol A, del Olmo M (2002) Correlation between acetaldehyde and ethanol resistance and expression of HSP genes in yeast strains isolated during the biological ageing of sherry wines. Arch Microbiol 177:304-312
5. Barber AR, Pamment NB, Henningsson HM (2002a) Acceleration of high gravity yeast fermentations by acetaldehyde addition. Biotechnol Lett 24:891-895
6. Barber AR, Vriesekoop F, Pamment NB (2002b) Effects of acetaldehyde on Saccharomyces cerevisiae exposed to a range of chemical and environmental stresses. Enzyme Microb Tech 30:240-250
7. Beck T, Schmidt A, Hall MN (1999) Starvation induces vacuolar targeting and degradation of the tryptophan permease in yeast. J Cell Biol 146:1227-1238
8. Bely M, Sablayrolles JM, Barre P (1990) Description of alcoholic fermentation kinetics: its variability and significance. Am J Enol Vitic 40:319-324
9. Bonnemaire JP (1972) Dosage de divers métaux du vin: calcium, magnésium, zinc, cuivre, fer, plomb. PhD, Pharmacie, Université Montpellier I, Montpellier, France
10. Boucherie H, Bataille N, Fitch IT, Perrot M, Tuite MF (1995) Differential synthesis of glyceraldehyde-3-phosphate dehydrogenase polypeptides in stressed yeast cells. FEMS Microbiol Lett 125:127-133
11. Boy-Marcotte E, Perrot M, Bussereau F, Boucherie H, Jacquet M (1998) Msn2p and Msn4p control a large number of genes induced at the diauxic transition which are repressed by cyclic AMP in Saccharomyces cerevisiae. J Bacteriol 180:1044-1052
12. Brachmann CB, Davies A, Cost GJ, Caputo E, Li J, Hieter P, Boeke JD (1998) Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications. Yeast 14:115-132
13. Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248-254
14. Bromberg SK, Bower PA, Duncombe GR, Fehring J, Gerber L, Lau VK, Tata M (1997) Requirements for zinc, manganese, calcium, and magnesium in wort. J Am Soc Brew Chem 55:123-128
15. Buu LM, Chen YC, Lee FJ (2003) Functional characterization and localization of acetyl-CoA hydrolase, Ach1p, in Saccharomyces cerevisiae. J Biol Chem 278:17203-17209
16. Cavalieri D, Barberio C, Casalone E, Pinzauti F, Sebastiani F, Mortimer RK, Polsinelli M (1998) Genetic and molecular diversity in S. cerevisiae natural populations. Food Technol Biotechnol 36:45-50
17. Cheraiti N, Guezenec S, Salmon JM (2005) Redox interactions between Saccharomyces cerevisiae and Saccharomyces uvarum in mixed culture under enological conditions. Appl Environ Microbiol 71:255-260
18. Christensen P, Kasimatis AN (1967) Correction of vineyard zinc deficiency by soil injection of zinc sulfate solutions. Am J Enol Vitic 18:217-224
19. de Smidt O, Albertyn J, du Preez JC (2007) Molecular and physiological aspects of alcohol dehydrogenases in Saccharomyces cerevisiae. Proceedings of the 26th International Specialized Symposium on yeasts (ISSY 26), Agricultural faculty, university of Basilicata, Potenza, Italy
20. Delgado ML, O, Connor JE, Azorín I, Renau-Piqueras J, Gil ML, Gozalbo D (2001) The glyceraldehyde-3-phosphate dehydrogenase polypeptides encoded by the Saccharomyces cerevisiae TDH1, TDH2 and TDH3 genes are also cell wall proteins. Microbiology 147:411-417
21. Didion T, Regenberg B, Jorgensen MU, Kielland-Brandt MC, Andersen HA (1998) The permease homologue Ssy1p controls the expression of amino acid and peptide transporter genes in Saccharomyces cerevisiae. Mol Microbiol 27:643-650
22. Drewke C, Ciriacy M (1988) Overexpression, purification and properties of alcohol dehydrogenase IV from Saccharomyces cerevisiae. Biochim Biophys Acta 950:54-60
23. Egli CM, Edinger WD, Mitrakul CM, Henick-Kling T (1998) Dynamics of indigenous and inoculated yeast populations and their effect on the sensory character of Riesling and Chardonnay wines. J Appl Microbiol 85:779-789
24. Eide J (2005) Aap1 activation domain 1 and its role in controlling gene expression in response to cellular zinc status. Mol Microbiol 57:834-846
25. Finkelstein D, Ewing R, Gollub J, Sterky F, Cherry JM, Somerville S (2002) Microarray data quality analysis: lessons from the AFGC project. Plant Mol Biol 48:119-131
26. Flikweert MT (1999) Physiological roles of pyruvate decarboxylase in Saccharomyces cerevisiae. PhD, Delft University of Technology, Delft, Netherlands
27. Gasch AP, Spellman PT, Kao CM, Carmel-Harel O, Eisen MB, Storz G, Botstein D, Brown PO (2000) Genomic expression programs in the response of yeast cells to environmental changes. Mol Biol Cell 11:4241-4257
28. Gonzalez B, Francois J, Renaud M (1997) A rapid and reliable method for metabolite extraction in yeast using boiling buffered ethanol. Yeast 13:1347-1355
29. Herbig A, Bird AJ, Swierczek S, McCall K, Mooney M, Wu C, Winge DR, Lyons D, Thomas J (2000) Genome-wide characterization of the Zap1p zinc-responsive regulon in yeast. Proc Natl Acad Sci U S A 97:7957-7962
30. Higgins VJ, Rogers PJ, Dawes IW (2003) Application of genome-wide expression analysis to identify molecular markers useful in monitoring industrial fermentations. Appl Environ Microbiol 69:7535-7540
31. Iraqui I, Vissers S, Bernard F, de Craene JO, Boles E, Urrestarazu A, Andre B (1999) Amino acid signaling in Saccharomyces cerevisiae: a permease-like sensor of external amino acids and F-Box protein Grr1p are required for transcriptional induction of the AGP1 gene, which encodes a broad-specificity amino acid permease. Mol Cell Biol 19:989-1001
32. Jensen ON, Wilm M, Shevchenko A, Mann M (1999) Sample preparation methods for mass spectrometric peptide mapping directly from 2-D electrophoresis gels. Methods Mol Biol 112:513-530
33. Kreder GC (1999) Yeast assimilation of trub-bound zinc. J Am Soc Brew Chem 57:129-132
34. Liu SQ, Pilone GJ (2000) An overview of formation and roles of acetaldehyde in winemaking with emphasis on microbiological implications. Int J Food Sci Technol 35:49-61
35. Lyons TJ, Gasch AP, Gaither LA, Botsein D, Brown PO, Eide DJ (2000) Genome-wide characterization of the Zap1p zinc-responsive regulon in yeast. Proc Natl Acad Sci USA 97:7957-7962
36. Mac Diarmid CW, Gaither LA, Eide D (2000) Zinc transporters that regulate vacuolar zinc storage in Saccharomyces cerevisiae. EMBO J 19:2845-2855
37. Magasanik B, Kaiser CA (2002) Nitrogen regulation in Saccharomyces cerevisiae. Gene 290:1-18
38. McAlister L, Holland MJ (1985a) Differential expression of the three yeast glyceraldehyde-3-phosphate dehydrogenase genes. J Biol Chem 260:15019-15027
39. McAlister L, Holland MJ (1985b) Isolation and characterization of yeast strains carrying mutations in the glyceraldehyde-3-phosphate dehydrogenase genes. J Biol Chem 260:15013-15018
40. Neuhoff V, Arold N, Taube D, Ehrhardt W (1988) Improved staining of proteins in polyacrylamide gels including isoelectric focusing gels with clear background at nanogram sensitivity using Coomassie Brilliant Blue G-250 and R-250. Electrophoresis 9:255-262
41. Nivinskas H, Cole KD (1996) Environmentally benign staining procedure for electrophoresis gels using Coomassie Brilliant Blue. Biotechniques 20:380-384
42. O'Dell BL (1984) Bioavailability of trace elements. Nutr Rev 42:301-308
43. Omura F, Kodama Y, Ashikari T (2001) The N-terminal domain of the yeast permease Bap2p plays a role in its degradation. Biochem Biophys Res Commun 287:1045-1050
44. Pigeau GM, Inglis DL (2005) Upregulation of ALD3 and GPD1 in Saccharomyces cerevisiae during Icewine fermentation. J Appl Microbiol 99:112-125
45. Rosenfeld E, Beauvoit B, Blondin B, Salmon JM (2003) Oxygen consumption by anaerobic Saccharomyces cerevisiae under enological conditions: effect on fermentation kinetics. Appl Environ Microbiol 69:113-121
46. Rossignol T, Dulau L, Julien A, Blondin B (2003) Genome-wide monitoring of wine yeast gene expression during alcoholic fermentation. Yeast 19:1299-1321
47. Roustan JL, Sablayrolles JM (2002a) Impact of the addition of electron acceptors on the by-products of alcoholic fermentation. Enzyme Microb Technol 34:142-152
48. Roustan JL, Sablayrolles JM (2002b) Modification of the acetaldehyde concentration during alcoholic fermentation and effects on fermentation kinetics. J Biosci Bioeng 93:367-375
49. Sablayrolles JM, Barre P, Grenier P (1987) Design of a laboratory automatic system for studying alcoholic fermentations in anisothermal enological conditions. Biotechnol Tech 1:181-184
50. Salmon JM (1989) Effect of sugar transport inactivation in Saccharomyces cerevisiae on sluggish and stuck enological fermentations. Appl Environ Microbiol 55:953-958
51. Sauvage FX, Pradal M, Chatelet P, Tesniere C (2007) Proteome changes in leaves from grapevine (Vitis vinifera L.) transformed for alcohol dehydrogenase activity. J Agric Food Chem 55:2597-2603
52. Stanbrough M, Magasanik B (1995) Transcriptional and posttranslational regulation of the general amino acid permease of Saccharomyces cerevisiae. J Bacteriol 177:94-102
53. Stanley GA, Douglas NG, Every EJ, Tzanatos T, Pamment NB (1993) Inhibition and stimulation of yeast growth by acetaldehyde. Biotechnol Lett 15:1199-1204
54. Stanley GA, Hobley TJ, Pamment NB (1997) Effect of acetaldehyde on Saccharomyces cerevisiae and Zymomonas mobilis subjected to environmental shocks. Biotechnol Bioeng 53:71-78
55. Tseng GC, Oh MK, Rohlin L, Liao JC, Wong WH (2001) Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects. Nucleic Acids Res 57:383-401
56. Vallee H, Bert L, Falchuk KH (1993) The biochemical basis of zinc physiology. Physiol Rev 73:99-104
57. Villanova M, Martinez C, Siero C, Masneuf I, Dubourdieu D (2003) Ecology of Saccharomyces cerevisiae fermentations at a Rias Baixas appellation contrôlée winery. J Inst Brew 109:305-308
58. Walker-Caprioglio HM, Parks LW (1987) Autoconditioning factor relieves ethanol-induced growth inhibition of Saccharomyces cerevisiae. Appl Environ Microbiol 53:33-35
59. Zhao H, Eide DJ (1996a) The yeast ZRT1 gene encodes the zinc transporter protein of a high-affinity uptake system induced by zinc depletion. Proc Natl Acad Sci U S A 93:2454-2458
60. Zhao H, Eide DJ (1996b) The ZRT2 gene encodes the low affinity zinc transporter in Saccharomyces cerevisiae. J Biol Chem 271:23203-23210
61. Zhao H, Eide DJ (1997) Zap1p, a metalloregulatory protein involved in zinc-responsive transcriptional regulation in Saccharomyces cerevisiae. Mol Cell Biol 17:5044-5052