Metal nanoparticle-based detection for DNA analysis

Current Pharmaceutical Biotechnology

Volumn 8, Issue 5, 2007, Pages 274-285

  Möller, Robert ^a   Fritzsche, Wolfgang ^a  

^a LEIBNIZ INSTITUTE OF PHOTONIC TECHNOLOGY   (Germany)

Author keywords

DNA detection; DNA microarrays; Gold nanoparticles

Indexed keywords

BIOMATERIAL; DNA; FUNCTIONAL GROUP; GOLD; METAL; NANOPARTICLE; SILVER; STREPTAVIDIN;

ANALYTIC METHOD; BINDING KINETICS; BIOSENSOR; CHEMICAL LABELING; DNA DETERMINATION; DNA MICROARRAY; DNA SEQUENCE; ELECTROCHEMICAL DETECTION; FLUORESCENCE ANALYSIS; GENE TARGETING; GENE TECHNOLOGY; LIGHT SCATTERING; MOLECULAR DYNAMICS; MOLECULAR INTERACTION; POINT MUTATION; REDUCTION KINETICS; REVIEW; SIGNAL DETECTION; SPECTROSCOPY; SURFACE PLASMON RESONANCE; SYNTHESIS;

ANIMALS; HUMANS; METAL NANOPARTICLES; SEQUENCE ANALYSIS, DNA;

EID: 35349011173     PISSN: 13892010     EISSN: 18734316     Source Type: Journal    
DOI: 10.2174/138920107782109967     Document Type: Review

References (104)

1. Schena, M. (2003) Microarray analysis. (Wiley-Liss Verlag, Hoboken, New Jersey).
2. Daniel, M.C. and Astruc, D. (2004) Chem. Rev., 104, 293-346.
3. Hayat, M.H. (1989) Colloidal Gold: Principles. Methods and Applications. (Elsevier Science & Technology Books).
4. Turkevich, J.; Stevenson, P.L. and Hiller, J. (1951) Discuss Faraday Soc., 11, 55.
5. Frens, G. (1973) Nature, 241, 20-22.
6. Wetten, R.L.; Khoury, J.T.; Alvarez, M.M.; Murthy, S.; Vezmar, I.; Wang, Z.L.; Stephens, P.W. and Landman. U. (1996) Advanced Materials: (Weinheim, Federal Republic of Germany) 8, 428.
7. Abid, J.P. (2003) In Laboratorie d'Electrochimie, (Ecole Polytechnique Federale de Lausanne, Lausanne).
8. He, L.; Musick, M. D.; Nicewarner, S. R.; Salinas, F.G.; Nekovic, S. J.; Natan, M. J. and Keating, C.D. (2000) J. Am. Chem. Soc., 122, 9071-9077.
9. Mirkin, C.A.; Letsinger, R.I.; Mucic, R.C. and Storhoff, J. J. (1996) Nature, 382, 607-9.
10. Alivisatos, A. P.; Johnsson, K.P.; Peng, X.; Wilson, T.E.; Loweth, C. J.; Bruchez, Jr. M.P. and Schultz, P.G. (1996) Nature, 382, 609-611.
11. Letsinger, R.L.; Elghanian, R.; Viswanadham, G. and Mirkin, C.A. (2000) Bioconjug. Chem., 11, 289-91.
12. Li, Z.; Jin, R.; Mirkin,C.A. and Letsinger, R.L. (2002) Nucleic Acids Res., 30, 1558-62.
13. Fritzsche, W. and Taton, T.A. (2003) Nanotechnology, 14, R.63-R73.
14. Park, S.; Brown, K.A. and Hamad-Schifferli, K. (2004) Nano Lett., 4, 1925-1929.
15. Taton, T A. (2002) Trends Biotechnol., 20, 277-9.
16. Kreibig, U. and Vollmer, M. (1995) Optical Properties of Metal Clusters, Berlin).
17. Yguerabide, J. and Yguerabide, E.E. (1998) Anal. Biochem., 262, 137-156.
18. Kelly, K.L.; Coronado, E.; Zhao, L.L. and Schatz, G.C. (2003) J. Phys. Chem., B, 107, 668-677.
19. Quinten, M. (2001) Appl. Phys. B., 73, 245-255.
20. Elghanian, R.; Storhoff, J.J.; Mucic, R.C.; Letsinger, R.L. and Mirkin, C. A. (1997) Science, 277, 1078-81.
21. Storhoff, J.J.; Elghanian, R.; Mucic, R.C.; Mirkin, C.A. and Letsinger. R.L. (1998) J. Am. Chem. Soc., 120, 1959-1964.
22. Reynolds, R.A.; III, Mirkin, C.A. and Letsinger, R. L. (2000) J. Am. Chem. Soc., 122, 3795-3796.
23. Jin, J.; Wu,G.; Li, Z.; Mirkin, C. A. and Schatz, G. C. (2003) J. Am. Chem. Soc., 125, 1643-54.
24. Tato, T. A.; Mirkin, C. A. and Letsinger, R. L. (2000) Science, 289, 1757-60.
25. Li, J.; Chu, X.; Liu, Y.; Jiang, J. H.; He, Z.; Zhang, Z.; Shen, G. and Yu, R. Q. (2005) Nucleic Acids Res., 33, e168.
26. Sato, K.; Hosokawa, K. and Maeda, M. (2005) Nucleic Acids Res., 33, e4.
27. Sato, K.; Hosokawa, K. and Maeda, M. (2003) J. Am. Chem. Soc., 125, 8102-3.
28. Li, L. and Rothberg, L. (2004) Proc. Natl. Acad. Sci. USA, 101, 14036-9.
29. Li, H. and Rothberg, L. J. (2004) J. Am. Chem. Soc., 126, 10958-61.
30. Li, H. and Rothberg, L. J. (2004) Anal. Chem., 76, 5414-7.
31. Hütter, E. and Pileni, M.-P. (2003) Phys. Chem. B, 107, 6497-6499.
32. Csaki, A.; Möller, R.; Straube, W.; Köhler, J. M. and Fritzsche, W. (2001) Nucleic Acids Res., 29, E81.
33. Reichert, J.; Csaki, J.; Köhler, J. M. and Fritzsche, W. (2000) Anal. Chem., 72, 6025-9.
34. Köhler, J. M.; Csaki, A.; Reichert, J.; Móller, R.; Straube, W. and Fritzsche, W. (2001) Sens. Actuators, 76, 166-172.
35. Hacker, G. W.; Danscher, G.; Graf, A. H.; Bernatzky, G.; Schiechl, A. and Grimelius, L. (1991) Prog. Histochem. Cytochem., 23, 286-90.
36. Csaki, A.; Kaplanek, P.; Möller, R. and Fritzsche, W. (2003) Nanotechnology, 14, 1262-1268.
37. Alexandre, I.; Hamels, S.; Dufour, S.; Collet, J.; Zammatteo, N.; De Longueville, F.; Gala, F.L. and Remacle, J. (2001) Anal. Biochem., 295, 1-8.
38. Li, J.; Xu, C.; Zhang, Z.; Wang, Y.; Peng, H.; Lu, Z. and Chan, M. (2005) Sens. Actuators. B, 106, 378-382.
39. Yguerabide, J. and Yguerabide, E.E. (1998) Anal. Biochem., 262, 157-76.
40. Schult, D.A. (2003) Curr. Opin. Biotechnol., 14, 13-22.
41. Schult, S.; Smith, D.R.; Mock, J.J. and Schultz, D A. (2000) Proc. Natl. Acad. Sci. USA, 97, 996-1001.
42. Stimpson, D.I.; Hoijer, J. V.; Hsieh, W. T.; Jon, C.; Gordon, J.; Theriault, T.; Gamble, R. and Baldeschwieler, J. D. (1995) Proc. Natl. Acad. Sci. USA, 92, 6379-83.
43. Taton, T. A.; Lu, G. and Mirkin, C. A. (2001) J. Am. Chem. Soc., 123, 5164-5.
44. Storhoff, J. J.; Lucas, A. D.; Garimella, V.; Bao, Y. P. and Muller, U. R. (2004) Nat. Biotechnol., 22, 883-7.
45. Oldenburg, S. J.; Genick, C. C.; Clark, K. A. and Schultz, D. A. (2002) Anal. Biochem., 309, 109-116.
46. Bao, P.; Frutos, A. G.; Greef, C.; Lahiri, J.; Muller, U.; Peterson, T. C.; Warden, L. and Xie, X. (2002) Anal. Chem., 74, 1792-1797.
47. Yguerabide, J. and Yguerabide, E. E. (2001) J. Cell Biochem. Suppl., 37(Suppl), 71-81.
48. Freeman, R. G.; Grabar, K.C.; Allison, K. J.; Bright, R. M.; Jackson, M. A.; Smith, P. C.; Walter, D. G. and Natan, M. J. (1995) Science, 267, 1629-1632.
49. Vo-Dinh, T.; Yan, F. and Wabuyele, M. B. (2005) J. Raman Spectrosc., 36, 640-647.
50. Nie, S. and Emory, S. R. (1997) Science, 275, 1102-6.
51. Stuart, D. A.; Haes, A. J.; Yonzon, C. R.; Hicks, E. M. and Van Duyne, R. P. (2005) IEE Proc. Nanobiotechnol., 152, 13-32.
52. Cao, Y C.; Jin, R. and Mirkin, C. A. (2002) Science, 297, 1536-40.
53. Wabuyele, M. B. and Vo-Dinh, T. (2005) Anal. Chem., 77, 7810-5.
54. Karlsson, R. (2004) J. Mol. Recognit., 17, 151-61.
55. Jonsson, U.; Faggerstam, L.; Ivarsson, B.; Johnsson, B.; Karlsson, R.; Lundh, K.; Lofas, S.; Persson, B.; Roos, H. and Ronnberg. I. (1991) Biotechniques, 11, 620-7.
56. Thiel, A. J.; Frutos, A. G.; Jordan, C. E.; Corn, R. M. and Smith, L. M. (1997) Anal. Chem., 69, 4948-4956.
57. Peterlinz, K. P.; Georgiadis, R. M.; Herne, T. M. and Tarlov, M. J. (1997) J. Am. Chem. Soc., 119, 3401-3402.
58. Nelson, B. P.; Grimsrud, T. E.; Liles, M. R.; Goodman, R. M. and Corn, R. M. (2001) Anal. Chem., 73, 1-7.
59. Lyon, L. A.; Musick, M. D. and Natan, M. J. (1998) Anal. Chem., 70, 5177-5183.
60. Nath, N. and Chilkoti, A. (2002) Anal. Chem., 74, 504-9.
61. Hutter, E. and Pileni, M.-P. (2003) Phys. Chem. B, 107, 6497-6499.
62. Tokeshi, M.; Uchida, M.; Hibara, A.; Sawada, T. and Kitamori, T. (2001) Anal. Chem., 73, 2112.
63. Boyer, D.; Tamarat, P.; Maali, P.; Lounis, B. and Orrit, M. (2002) Science, 297, 1160-1163.
64. Blab, G. A.; Cognet, L.; Berciaud, S.; Alexandre, I.; Husar, D.; Remacle, J. and Lounis, B. (2006) Biophys. J. Biophys. Lett., L13-L15.
65. Lavri, N. V. and Datsko, P. G. (2003) Appl. Phys. Lett., 82, 2697-2699.
66. Okahata, Y.; Matsunobu, Y.; Ijiro, K.; Mukae, M.; Murakami, A. and Makino, A. (1992) J. Am. Chem. Soc., 114, 8299-8300.
67. Zhou, X C.; O'Shea, S. J. and Li, S. F. Y. (2000) Chem. Commun., 953-954.
68. Patolsky, F.; Ranjit, K. T.; Lichtenstein, A. and Willner, I. (2000) Chem. Commun., 1025-1026.
69. Weizmann, Y.; Patolsky, F. and Willner, I. (2001) Analyst, 126, 1502-4.
70. Tatsuma, T.; Watanabe, Y.; Oyama, N.; Kitakizaki, K. and Haba, M. (1999) Anal. Chem., 71, 3632-3636.
71. Lutwyche, M. L.; Despont, M.; Drechsler, U.; Durig, U.; Haberle, W.; Rothhuizen, H.; Stutz, R.; Widmer, R.; Binnig, G. K. and Vettiger, P. (2000) Appl. Phys. Lett., 77, 3299-3301.
72. Vettiger, P.; Brugger, J.; Despont, M.; Drechsler, U.; Durig, U.; Haberle, W.; Lutwyche, M.; Rothhuizen, H.; Stutz, R.; Widmer, R. and Binnig, G. (1999) Microelectron. Eng., 46, 11-17.
73. Fritz, J.; Baller, M. K.; Lang, H. P.; Rothuizen.,P.; Vettiger, P.; Meyer, E.; Guntherodt, H.; Gerber, C. and Gimzewski, J. K. (2000) Science, 288, 316-8.
74. Hansen, K. M.; Ji, H.-F.; Wu, G.; Datar, R.; Cote, R.; Majumdar, A. and Thundat,. T. (2001) Anal. Chem., 73, 1567-1571.
75. Su, M.; Li, S. and Dravid, V. P. (2003) Appl. Phys. Lett., 82, 3562-3564.
76. Drummond, T. G.; Hill, M. G. and Barton, J. K. (2003) Nat. Biotechnol., 21, 1192-9.
77. Kerman, K.; Kobayashi, M. and Tamiya, E. (2004) Meas. Sci. Technol., 15, R1-R11.
78. Wang, J. (1985) Stripping Analysis, Principles, Instrumentation, and Aplications (VCH, Deerfield Beach, FL).
79. Wang, J.; Xu, D.; Kawde, A. N. and Polsky, R. (2001) Anal. Chem., 73, 5576-81.
80. Dequaire, M.; Degrand, C. and Limoges, B. (2000) Anal. Chem., 72, 5521-8.
81. Authier, C.; Grossiord, C. and Brossier, P. (2001) Anal. Chem., 73, 4450-6.
82. Wang, J.; Xu, D. and Polsky, R. (2002) J. Am. Chem. Soc., 124, 4208-9.
83. Wang, J.; Liu, G. and Merkoci, A. (2003) J. Am. Chem. Soc., 125, 3214-5.
84. Ozsoz, M.; Erdem, A.; Kerman, K.; Ozkan, D.; Tugrul, B.; Topcuoglu, N.; Ekren, H. and Taylan, M. (2003) Anal. Chem., 75, 2181-7.
85. Cai, H.; Wang, Y.; He, P. and Fang, Y. (2002) Anal. Chim. Acta, 469, 165-172.
86. Mroczkowski, S. J.; Siegesmund, K. A. and Yorde, D. E. (1992) WO. 90/ 05300.
87. Vellev, O. D. and Kaler, E. W. (1999) Langmuir, 15, 3963-3698
88. Möller, R.; Csaki, A.; Köhler, J. M. and Fritzsche, W. (2001) Langmuir, 17, 5426-5430.
89. Park, S. J.; Taton, T. A. and Mirkin, C. A. (2002) Science, 295, 1503-6.
90. Urban, M.; Möller, R. and Fritzsche, W. (2003) Rev. Sci. Instruments, 74, 1077-1081.
91. Li, J.; Xue, M.; Lu, Z.; Zhang, Z.; Feng, L. and Chan, M. (2003) IEEE Trans. Electron Devices, 50, 2165-2170.
92. Diessel, E.; Grothe, K.; Siebert, H. M.; Warner, B. D. and Burmeister, J. (2004) Biosens. Bioelectron., 19, 1229-35.
93. Moreno-Hagelsieb, L. L.; Pampin, P. E.; Bourgeois, R.; Remacle, D.; Flandre, J. D. (2004) Sens. Actuators B, 98, 269-274.
94. Li, H.; Huang, J.; Lv, J.; An, J.; Zhang, X.; Zhang, Z.; Fan, C. and Hu, J. (2005) Angew. Chem. Int. Ed. Engl., 117, 5230-5233.
95. Li, M.; Lin, Y. C.; Wu, C. C. and Liu, H. S. (2005) Nucleic Acids Res., 33, e184.
96. Abdoul-Carime, H. and Sanche, L. (2002) Int. J. Radiat. Biol., 78, 89-99.
97. Nam, J. M.; Park, S. J. and Mirkin, C.A. (2002) J. Am. Chem. Soc., 124, 3820-1.
98. Nam, J.M.; Stoeva, S.I. and Mirkin, C. A. (2004) J. Am. Chem. Soc., 126, 5932-3.
99. Nam, J. M.; Thaxton, C. S. and Mirkin, C. A. (2003) Science, 301, 1884-6.
100. Thaxton, C. S.; Hill, H. D.; Georganopoulou, D. G.; Stoeva, S. I. and Mirkin, C. A. (2005) Anal. Chem., 77, 8174-8.
101. Georganopoulou, D. G.; Chang, L.; Nam, J. M.; Thaxton, C. S.; Mufson, E. J.; Klein, W. L. and Mirkin, C. A. (2005) Proc. Natl. Acad. Sci. USA, 102, 2273-6.
102. Zhang, Z. L.; Pang, D. W.; Yuan, L.; Cai, R. X. and Abruna, H. D. (2005) Anal. Bioanal. Chem.; 381, 833-8.
103. Reynolds, R. A.; Mirkin, C. A. and Letsinger, R. L. (2000) J. Am. Chem. Soc., 122, 3795-3796.
104. Zhang, G.-J.; Kretschmer, R.; Csaki, A.; Fritzsche, W.; (2004) J. Fluoresc., 14, 369-375.