-
1
-
-
0141458953
-
Human immunodeficiency virus type 1 protease regulation of Tat activity is essential for efficient reverse transcription and replication
-
Apolloni, A., C. W. Hooker, J. Mak, and D. Harrich. 2003. Human immunodeficiency virus type 1 protease regulation of Tat activity is essential for efficient reverse transcription and replication. J. Virol. 77:9912-9921.
-
(2003)
J. Virol
, vol.77
, pp. 9912-9921
-
-
Apolloni, A.1
Hooker, C.W.2
Mak, J.3
Harrich, D.4
-
2
-
-
84883842434
-
Long-term cultivation of hypodiploid human tumor cells
-
Auersperg, N. 1964. Long-term cultivation of hypodiploid human tumor cells. J. Natl. Cancer Inst. 32:135-163.
-
(1964)
J. Natl. Cancer Inst
, vol.32
, pp. 135-163
-
-
Auersperg, N.1
-
3
-
-
0028944667
-
Pathogenicity of live, attenuated SIV after mucosal infection of neonatal macaques
-
Baba, T. W., Y. S. Jeong, D. Penninck, R. Branson, M. F. Greene, and R. M. Ruprecht. 1995. Pathogenicity of live, attenuated SIV after mucosal infection of neonatal macaques. Science 267:1820-1825.
-
(1995)
Science
, vol.267
, pp. 1820-1825
-
-
Baba, T.W.1
Jeong, Y.S.2
Penninck, D.3
Branson, R.4
Greene, M.F.5
Ruprecht, R.M.6
-
4
-
-
0032905068
-
Live attenuated, multiply deleted simian immunodeficiency virus causes AIDS in infant and adult macaques
-
Baba, T. W., V. Liska, A. H. Khimani, N. B. Ray, P. J. Dailey, D. Penninck, R. Bronson, M. F. Greene, H. M. McClure, L. N. Martin, and R. M. Ruprecht. 1999. Live attenuated, multiply deleted simian immunodeficiency virus causes AIDS in infant and adult macaques. Nat. Med. 5:194-203.
-
(1999)
Nat. Med
, vol.5
, pp. 194-203
-
-
Baba, T.W.1
Liska, V.2
Khimani, A.H.3
Ray, N.B.4
Dailey, P.J.5
Penninck, D.6
Bronson, R.7
Greene, M.F.8
McClure, H.M.9
Martin, L.N.10
Ruprecht, R.M.11
-
5
-
-
0034581163
-
Tet repressor-based system for regulated gene expression in eukaryotic cells: Principles and advances
-
Baron, U., and H. Bujard. 2000. Tet repressor-based system for regulated gene expression in eukaryotic cells: principles and advances. Methods Enzymol. 327:401-421.
-
(2000)
Methods Enzymol
, vol.327
, pp. 401-421
-
-
Baron, U.1
Bujard, H.2
-
6
-
-
0030797223
-
Tetracycline-controlled transcription in eukaryotes: Novel transactivators with graded transactivation potential
-
Baron, U., M. Gossen, and H. Bujard. 1997. Tetracycline-controlled transcription in eukaryotes: novel transactivators with graded transactivation potential. Nucleic Acids Res. 25:2723-2729.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 2723-2729
-
-
Baron, U.1
Gossen, M.2
Bujard, H.3
-
7
-
-
19344370167
-
Evidence that HIV-1 encodes an siRNA and a suppressor of RNA silencing
-
Bennasser, Y., S. Y. Le, M. Benkirane, and K. T. Jeang. 2005. Evidence that HIV-1 encodes an siRNA and a suppressor of RNA silencing. Immunity 22:607-619.
-
(2005)
Immunity
, vol.22
, pp. 607-619
-
-
Bennasser, Y.1
Le, S.Y.2
Benkirane, M.3
Jeang, K.T.4
-
8
-
-
0026528771
-
Structural features in TAR RNA of human and simian immunodeficiency viruses: A phylogenetic analysis
-
Berkhout, B. 1992. Structural features in TAR RNA of human and simian immunodeficiency viruses: a phylogenetic analysis. Nucleic Acids Res. 20: 27-31.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 27-31
-
-
Berkhout, B.1
-
9
-
-
0025268928
-
Efficient transactivation by the HIV-2 Tat protein requires a duplicated TAR RNA structure
-
Berkhout, B., A. Gatignol, J. Silver, and K. T. Jeang. 1990. Efficient transactivation by the HIV-2 Tat protein requires a duplicated TAR RNA structure. Nucleic Acids Res. 18:1839-1846.
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 1839-1846
-
-
Berkhout, B.1
Gatignol, A.2
Silver, J.3
Jeang, K.T.4
-
10
-
-
0024446714
-
trans activation of human immunodeficiency virus type 1 is sequence specific for both the single-stranded bulge and loop of the trans-acting-responsive hairpin: A quantitative analysis
-
Berkhout, B., and K. T. Jeang. 1989. trans activation of human immunodeficiency virus type 1 is sequence specific for both the single-stranded bulge and loop of the trans-acting-responsive hairpin: a quantitative analysis. J. Virol. 63:5501-5504.
-
(1989)
J. Virol
, vol.63
, pp. 5501-5504
-
-
Berkhout, B.1
Jeang, K.T.2
-
11
-
-
0037196601
-
Control over HIV-1 replication by an antibiotic; a novel vaccination strategy with a drug-dependent virus
-
Berkhout, B., G. Marzio, and K. Verhoef. 2002. Control over HIV-1 replication by an antibiotic; a novel vaccination strategy with a drug-dependent virus. Virus Res. 82:103-108.
-
(2002)
Virus Res
, vol.82
, pp. 103-108
-
-
Berkhout, B.1
Marzio, G.2
Verhoef, K.3
-
12
-
-
0024322804
-
Tat trans-activates the human immunodeficiency virus through a nascent RNA target
-
Berkhout, B., R. H. Silverman, and K. T. Jeang. 1989. Tat trans-activates the human immunodeficiency virus through a nascent RNA target. Cell 59:273-282.
-
(1989)
Cell
, vol.59
, pp. 273-282
-
-
Berkhout, B.1
Silverman, R.H.2
Jeang, K.T.3
-
13
-
-
0032932711
-
Genetic instability of live, attenuated HIV-1 vaccine strains
-
Berkhout, B., K. Verhoef, J. L. B. van Wamel, and B. Back. 1999. Genetic instability of live, attenuated HIV-1 vaccine strains. J. Virol. 73:1138-1145.
-
(1999)
J. Virol
, vol.73
, pp. 1138-1145
-
-
Berkhout, B.1
Verhoef, K.2
van Wamel, J.L.B.3
Back, B.4
-
14
-
-
33645292647
-
Acetylated Tat regulates human immunodeficiency virus type 1 splicing through its interaction with the splicing regulator p32
-
Berro, R., K. Kehn, C. de la Fuente, A. Pumfery, R. Adair, J. Wade, A. M. Colberg-Poley, J. Hiscott, and F. Kashanchi. 2006. Acetylated Tat regulates human immunodeficiency virus type 1 splicing through its interaction with the splicing regulator p32. J. Virol. 80:3189-3204.
-
(2006)
J. Virol
, vol.80
, pp. 3189-3204
-
-
Berro, R.1
Kehn, K.2
de la Fuente, C.3
Pumfery, A.4
Adair, R.5
Wade, J.6
Colberg-Poley, A.M.7
Hiscott, J.8
Kashanchi, F.9
-
15
-
-
0033529211
-
Recruitment of cyclin T1/P-TEFb to an HIV type 1 long terminal repeat promoter proximal RNA target is both necessary and sufficient for full activation of transcription
-
Bieniasz, P. D., T. A. Grdina, H. P. Bogerd, and B. R. Cullen. 1999. Recruitment of cyclin T1/P-TEFb to an HIV type 1 long terminal repeat promoter proximal RNA target is both necessary and sufficient for full activation of transcription. Proc. Natl. Acad. Sci. USA 96:7791-7796.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 7791-7796
-
-
Bieniasz, P.D.1
Grdina, T.A.2
Bogerd, H.P.3
Cullen, B.R.4
-
16
-
-
27944487541
-
Tat gets the "green" light on transcription initiation
-
Brady, J., and F. Kashanchi. 2005. Tat gets the "green" light on transcription initiation. Retrovirology 2:69.
-
(2005)
Retrovirology
, vol.2
, pp. 69
-
-
Brady, J.1
Kashanchi, F.2
-
17
-
-
0037227694
-
A truncated form of Nef selected during pathogenic reversion of simian immunodeficiency virus SIVmac239Δnef increases viral replication
-
Chakrabarti, L. A., K. J. Metzner, T. Ivanovic, H. Cheng, J. Louis-Virelizier, R. I. Connor, and C. Cheng-Mayer. 2003. A truncated form of Nef selected during pathogenic reversion of simian immunodeficiency virus SIVmac239Δnef increases viral replication. J. Virol. 77:1245-1256.
-
(2003)
J. Virol
, vol.77
, pp. 1245-1256
-
-
Chakrabarti, L.A.1
Metzner, K.J.2
Ivanovic, T.3
Cheng, H.4
Louis-Virelizier, J.5
Connor, R.I.6
Cheng-Mayer, C.7
-
18
-
-
0028130256
-
Direct interactions between autoantigen La and human immunodeficiency virus leader RNA
-
Chang, Y. N., D. J. Kenan, J. D. Keene, A. Gatignol, and K.-T. Jeang. 1994. Direct interactions between autoantigen La and human immunodeficiency virus leader RNA. J. Virol. 68:7008-7020.
-
(1994)
J. Virol
, vol.68
, pp. 7008-7020
-
-
Chang, Y.N.1
Kenan, D.J.2
Keene, J.D.3
Gatignol, A.4
Jeang, K.-T.5
-
19
-
-
0032551184
-
Primary SIVsm isolates use the CCR5 coreceptor from sooty mangabeys naturally infected in West Africa: A comparison of coreceptor usage of primary SIVsm, HIV-2, and SIVmac
-
Chen, Z., A. Gettie, D. D. Ho, and P. A. Marx. 1998. Primary SIVsm isolates use the CCR5 coreceptor from sooty mangabeys naturally infected in West Africa: a comparison of coreceptor usage of primary SIVsm, HIV-2, and SIVmac. Virology 246:113-124.
-
(1998)
Virology
, vol.246
, pp. 113-124
-
-
Chen, Z.1
Gettie, A.2
Ho, D.D.3
Marx, P.A.4
-
20
-
-
0035918271
-
HIV-1 Tat protein interacts with mammalian capping enzyme and stimulates capping of TAR RNA
-
Chiu, Y. L., E. Coronel, C. K. Ho, S. Shuman, and T. M. Rana. 2001. HIV-1 Tat protein interacts with mammalian capping enzyme and stimulates capping of TAR RNA. J. Biol. Chem. 276:12959-12966.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 12959-12966
-
-
Chiu, Y.L.1
Coronel, E.2
Ho, C.K.3
Shuman, S.4
Rana, T.M.5
-
21
-
-
0036753540
-
Tat stimulates cotranscriptional capping of HIV mRNA
-
Chiu, Y. L., C. K. Ho, N. Saha, B. Schwer, S. Shuman, and T. M. Rana. 2002. Tat stimulates cotranscriptional capping of HIV mRNA. Mol. Cell 10:585-597.
-
(2002)
Mol. Cell
, vol.10
, pp. 585-597
-
-
Chiu, Y.L.1
Ho, C.K.2
Saha, N.3
Schwer, B.4
Shuman, S.5
Rana, T.M.6
-
22
-
-
30344441124
-
Longitudinal analysis of human immunodeficiency virus type 1 nef/long terminal repeat sequences in a cohort of long-term survivors infected from a single source
-
Churchill, M. J., D. I. Rhodes, J. C. Learmont, J. S. Sullivan, S. L. Wesselingh, I. R. Cooke, N. J. Deacon, and P. R. Gorry. 2006. Longitudinal analysis of human immunodeficiency virus type 1 nef/long terminal repeat sequences in a cohort of long-term survivors infected from a single source. J. Virol. 80:1047-1052.
-
(2006)
J. Virol
, vol.80
, pp. 1047-1052
-
-
Churchill, M.J.1
Rhodes, D.I.2
Learmont, J.C.3
Sullivan, J.S.4
Wesselingh, S.L.5
Cooke, I.R.6
Deacon, N.J.7
Gorry, P.R.8
-
23
-
-
0023005976
-
Trans-activation of human immunodeficiency virus occurs via a bimodal mechanism
-
Cullen, B. R. 1986. Trans-activation of human immunodeficiency virus occurs via a bimodal mechanism. Cell 46:973-982.
-
(1986)
Cell
, vol.46
, pp. 973-982
-
-
Cullen, B.R.1
-
24
-
-
14744272158
-
Improving the safety of a conditional-live human immunodeficiency virus type 1 vaccine by controlling both gene expression and cell entry
-
Das, A. T., C. E. Baldwin, M. Vink, and B. Berkhout. 2005. Improving the safety of a conditional-live human immunodeficiency virus type 1 vaccine by controlling both gene expression and cell entry. J. Virol. 79:3855-3858.
-
(2005)
J. Virol
, vol.79
, pp. 3855-3858
-
-
Das, A.T.1
Baldwin, C.E.2
Vink, M.3
Berkhout, B.4
-
25
-
-
34447261637
-
The TAR hairpin of human immunodeficiency virus type 1 can be deleted when not required for Tat-mediated activation of transcription
-
Das, A. T., A. Harwig, M. M. Vrolijk, and B. Berkhout. 2007. The TAR hairpin of human immunodeficiency virus type 1 can be deleted when not required for Tat-mediated activation of transcription. J. Virol. 81:7742-7748.
-
(2007)
J. Virol
, vol.81
, pp. 7742-7748
-
-
Das, A.T.1
Harwig, A.2
Vrolijk, M.M.3
Berkhout, B.4
-
26
-
-
4043072810
-
A conditionally replicating virus as a novel approach toward an HIV vaccine
-
Das, A. T., K. Verhoef, and B. Berkhout. 2004. A conditionally replicating virus as a novel approach toward an HIV vaccine. Methods Enzymol. 388:359-379.
-
(2004)
Methods Enzymol
, vol.388
, pp. 359-379
-
-
Das, A.T.1
Verhoef, K.2
Berkhout, B.3
-
27
-
-
0037992815
-
Conditional live virus as a novel approach towards a safe live attenuated HIV vaccine
-
Das, A. T., X. Zhou, M. Vink, B. Klaver, and B. Berkhout. 2002. Conditional live virus as a novel approach towards a safe live attenuated HIV vaccine. Expert Rev. Vaccines 1:293-301.
-
(2002)
Expert Rev. Vaccines
, vol.1
, pp. 293-301
-
-
Das, A.T.1
Zhou, X.2
Vink, M.3
Klaver, B.4
Berkhout, B.5
-
28
-
-
2442475398
-
Viral evolution as a tool to improve the tetracycline-regulated gene expression system
-
Das, A. T., X. Zhou, M. Vink, B. Klaver, K. Verhoef, G. Marzio, and B. Berkhout. 2004. Viral evolution as a tool to improve the tetracycline-regulated gene expression system. J. Biol. Chem. 279:18776-18782.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 18776-18782
-
-
Das, A.T.1
Zhou, X.2
Vink, M.3
Klaver, B.4
Verhoef, K.5
Marzio, G.6
Berkhout, B.7
-
29
-
-
0028804160
-
Genomic structure of an attenuated quasi species of HIV-1 from blood transfusion donor and recipients
-
Deacon, N. J., A. Tsykin, A. Solomon, K. Smith, M. Ludford-Menting, D. J. Hooker, D. A. McPhee, A. L. Greenway, A. Ellett, C. Chatfield, V. A. Lawson, S. Crowe, A. Maerz, S. Sonza, J. Learmont, J. S. Sullivan, A. Cunningham, D. Dwyer, D. Dowton, and J. Mills. 1995. Genomic structure of an attenuated quasi species of HIV-1 from blood transfusion donor and recipients. Science 270:988-991.
-
(1995)
Science
, vol.270
, pp. 988-991
-
-
Deacon, N.J.1
Tsykin, A.2
Solomon, A.3
Smith, K.4
Ludford-Menting, M.5
Hooker, D.J.6
McPhee, D.A.7
Greenway, A.L.8
Ellett, A.9
Chatfield, C.10
Lawson, V.A.11
Crowe, S.12
Maerz, A.13
Sonza, S.14
Learmont, J.15
Sullivan, J.S.16
Cunningham, A.17
Dwyer, D.18
Dowton, D.19
Mills, J.20
more..
-
30
-
-
0030864070
-
A mutation in integrase can compensate for mutations in the simian immunodeficiency virus att site
-
Du, Z., P. O. Ilyinskii, K. Lally, R. C. Desrosiers, and A. Engelman. 1997. A mutation in integrase can compensate for mutations in the simian immunodeficiency virus att site. J. Virol. 71:8124-8132.
-
(1997)
J. Virol
, vol.71
, pp. 8124-8132
-
-
Du, Z.1
Ilyinskii, P.O.2
Lally, K.3
Desrosiers, R.C.4
Engelman, A.5
-
31
-
-
19944424151
-
Immunization of macaques with single-cycle simian immunodeficiency virus (SIV) stimulates diverse virus-specific immune responses and reduces viral loads after challenge with SIVmac239
-
Evans, D. T., J. E. Bricker, H. B. Sanford, S. Lang, A. Carville, B. A. Richardson, M. Piatak, Jr., J. D. Lifson, K. G. Mansfield, and R. C. Desrosiers. 2005. Immunization of macaques with single-cycle simian immunodeficiency virus (SIV) stimulates diverse virus-specific immune responses and reduces viral loads after challenge with SIVmac239. J. Virol. 79:7707-7720.
-
(2005)
J. Virol
, vol.79
, pp. 7707-7720
-
-
Evans, D.T.1
Bricker, J.E.2
Sanford, H.B.3
Lang, S.4
Carville, A.5
Richardson, B.A.6
Piatak Jr., M.7
Lifson, J.D.8
Mansfield, K.G.9
Desrosiers, R.C.10
-
32
-
-
0029563181
-
Tat functions to stimulate the elongation properties of transcription complexes paused by the duplicated TAR RNA element of human immunodeficiency virus 2
-
Garcia-Martinez, L. F., G. Mavankal, P. Peters, F. Wu-Baer, and R. B. Gaynor. 1995. Tat functions to stimulate the elongation properties of transcription complexes paused by the duplicated TAR RNA element of human immunodeficiency virus 2. J. Mol. Biol. 254:350-363.
-
(1995)
J. Mol. Biol
, vol.254
, pp. 350-363
-
-
Garcia-Martinez, L.F.1
Mavankal, G.2
Peters, P.3
Wu-Baer, F.4
Gaynor, R.B.5
-
33
-
-
0028293115
-
Construction and in vitro properties of SIVmac mutants with deletions in "nonessential" genes
-
Gibbs, J. S., D. A. Regier, and R. C. Desrosiers. 1994. Construction and in vitro properties of SIVmac mutants with deletions in "nonessential" genes. AIDS Res. Hum. Retrovir. 10:607-616.
-
(1994)
AIDS Res. Hum. Retrovir
, vol.10
, pp. 607-616
-
-
Gibbs, J.S.1
Regier, D.A.2
Desrosiers, R.C.3
-
34
-
-
0033803425
-
Leader sequences downstream of the primer binding site are important for efficient replication of simian immunodeficiency virus
-
Guan, Y., J. B. Whitney, K. Diallo, and M. A. Wainberg. 2000. Leader sequences downstream of the primer binding site are important for efficient replication of simian immunodeficiency virus. J. Virol. 74:8854-8860.
-
(2000)
J. Virol
, vol.74
, pp. 8854-8860
-
-
Guan, Y.1
Whitney, J.B.2
Diallo, K.3
Wainberg, M.A.4
-
35
-
-
34347344012
-
The Ebola virus VP35 protein is a suppressor of RNA silencing
-
Haasnoot, J., W. de Vries, E. J. Geutjes, M. Prins, P. de Haan, and B. Berkhout. 2007. The Ebola virus VP35 protein is a suppressor of RNA silencing. PLoS Pathogens 3:e86.
-
(2007)
PLoS Pathogens
, vol.3
-
-
Haasnoot, J.1
de Vries, W.2
Geutjes, E.J.3
Prins, M.4
de Haan, P.5
Berkhout, B.6
-
36
-
-
0030957531
-
Tat is required for efficient HIV-1 reverse transcription
-
Harrich, D., C. Ulich, L. F. Garcia-Martinez, and R. B. Gaynor. 1997. Tat is required for efficient HIV-1 reverse transcription. EMBO J. 16:1224-1235.
-
(1997)
EMBO J
, vol.16
, pp. 1224-1235
-
-
Harrich, D.1
Ulich, C.2
Garcia-Martinez, L.F.3
Gaynor, R.B.4
-
37
-
-
0036392213
-
Human immunodeficiency virus type 1 reverse transcription is stimulated by tat from other lentiviruses
-
Hooker, C. W., J. Scott, A. Apolloni, E. Parry, and D. Harrich. 2002. Human immunodeficiency virus type 1 reverse transcription is stimulated by tat from other lentiviruses. Virology 300:226-235.
-
(2002)
Virology
, vol.300
, pp. 226-235
-
-
Hooker, C.W.1
Scott, J.2
Apolloni, A.3
Parry, E.4
Harrich, D.5
-
38
-
-
0028318363
-
Human immunodeficiency viruses regulated by alternative trans-activators: Genetic evidence for a novel non-transcriptional function of Tat in virion infectivity
-
Huang, L. M., A. Joshi, R. Willey, J. Orenstein, and K. T. Jeang. 1994. Human immunodeficiency viruses regulated by alternative trans-activators: genetic evidence for a novel non-transcriptional function of Tat in virion infectivity. EMBO J. 13:2886-2896.
-
(1994)
EMBO J
, vol.13
, pp. 2886-2896
-
-
Huang, L.M.1
Joshi, A.2
Willey, R.3
Orenstein, J.4
Jeang, K.T.5
-
39
-
-
0032125698
-
Identification of a sequence element immediately upstream of the polypurine tract that is essential for replication of simian immunodeficiency virus
-
Ilyinskii, P. O., and R. C. Desrosiers. 1998. Identification of a sequence element immediately upstream of the polypurine tract that is essential for replication of simian immunodeficiency virus. EMBO J. 17:3766-3774.
-
(1998)
EMBO J
, vol.17
, pp. 3766-3774
-
-
Ilyinskii, P.O.1
Desrosiers, R.C.2
-
40
-
-
0034030611
-
Functional differences between the long terminal repeat transcriptional promoters of human immunodeficiency virus type 1 subtypes A through G
-
Jeeninga, R. E., M. Hoogenkamp, M. Armand-Ugon, M. de Baar, K. Verhoef, and B. Berkhout. 2000. Functional differences between the long terminal repeat transcriptional promoters of human immunodeficiency virus type 1 subtypes A through G. J. Virol. 74:3740-3751.
-
(2000)
J. Virol
, vol.74
, pp. 3740-3751
-
-
Jeeninga, R.E.1
Hoogenkamp, M.2
Armand-Ugon, M.3
de Baar, M.4
Verhoef, K.5
Berkhout, B.6
-
41
-
-
0032146171
-
Protective immunity induced by live attenuated simian immunodeficiency virus
-
Johnson, R. P., and R. C. Desrosiers. 1998. Protective immunity induced by live attenuated simian immunodeficiency virus. Curr. Opin. Immunol. 10:436-443.
-
(1998)
Curr. Opin. Immunol
, vol.10
, pp. 436-443
-
-
Johnson, R.P.1
Desrosiers, R.C.2
-
42
-
-
0036200154
-
The Tat protein of human immunodeficiency virus type 1 (HIV-1) can promote placement of tRNA primer onto viral RNA and suppress later DNA polymerization in HIV-1 reverse transcription
-
Kameoka, M., M. Morgan, M. Binette, R. S. Russell, L. Rong, X. Guo, A. Mouland, L. Kleiman, C. Liang, and M. A. Wainberg. 2002. The Tat protein of human immunodeficiency virus type 1 (HIV-1) can promote placement of tRNA primer onto viral RNA and suppress later DNA polymerization in HIV-1 reverse transcription. J. Virol. 76:3637-3645.
-
(2002)
J. Virol
, vol.76
, pp. 3637-3645
-
-
Kameoka, M.1
Morgan, M.2
Binette, M.3
Russell, R.S.4
Rong, L.5
Guo, X.6
Mouland, A.7
Kleiman, L.8
Liang, C.9
Wainberg, M.A.10
-
43
-
-
0035127419
-
Role for human immunodeficiency virus type 1 Tat protein in suppression of viral reverse transcriptase activity during late stages of viral replication
-
Kameoka, M., L. Rong, M. Gotte, C. Liang, R. S. Russell, and M. A. Wainberg. 2001. Role for human immunodeficiency virus type 1 Tat protein in suppression of viral reverse transcriptase activity during late stages of viral replication. J. Virol. 75:2675-2683.
-
(2001)
J. Virol
, vol.75
, pp. 2675-2683
-
-
Kameoka, M.1
Rong, L.2
Gotte, M.3
Liang, C.4
Russell, R.S.5
Wainberg, M.A.6
-
44
-
-
0025334599
-
Induction of AIDS in rhesus monkeys by molecularly cloned simian immunodeficiency virus
-
Kestler, H., T. Kodama, D. Ringler, M. Marthas, N. Pedersen, A. Lackner, D. Regier, P. Sehgal, M. Daniel, N. King, and R. Desrosiers. 1990. Induction of AIDS in rhesus monkeys by molecularly cloned simian immunodeficiency virus. Science 248:1109-1112.
-
(1990)
Science
, vol.248
, pp. 1109-1112
-
-
Kestler, H.1
Kodama, T.2
Ringler, D.3
Marthas, M.4
Pedersen, N.5
Lackner, A.6
Regier, D.7
Sehgal, P.8
Daniel, M.9
King, N.10
Desrosiers, R.11
-
45
-
-
0028835788
-
Absence of intact nef sequences in a long-term survivor with nonprogressive HIV-1 infection
-
Kirchhoff, F., T. Greenough, D. B. Brettler, J. L. Sullivan, and R. C. Desrosiers. 1995. Absence of intact nef sequences in a long-term survivor with nonprogressive HIV-1 infection. N. Engl. J. Med. 332:228-232.
-
(1995)
N. Engl. J. Med
, vol.332
, pp. 228-232
-
-
Kirchhoff, F.1
Greenough, T.2
Brettler, D.B.3
Sullivan, J.L.4
Desrosiers, R.C.5
-
46
-
-
0027957797
-
Upstream U3 sequences in simian immunodeficiency virus are selectively deleted in vivo in the absence of an intact nef gene
-
Kirchhoff, F., H. W. Kestler III, and R. C. Desrosiers. 1994. Upstream U3 sequences in simian immunodeficiency virus are selectively deleted in vivo in the absence of an intact nef gene. J. Virol. 68:2031-2037.
-
(1994)
J. Virol
, vol.68
, pp. 2031-2037
-
-
Kirchhoff, F.1
Kestler III, H.W.2
Desrosiers, R.C.3
-
47
-
-
4544259896
-
Depletion of CD4 T lymphocytes in human lymphoid tissue infected ex vivo with doxycycline-dependent HIV-1
-
Kiselyeva, Y., Y. Ito, R. G. Lima, J. C. Grivel, A. T. Das, B. Berkhout, and L. B. Margolis. 2004. Depletion of CD4 T lymphocytes in human lymphoid tissue infected ex vivo with doxycycline-dependent HIV-1. Virology 328:1-6.
-
(2004)
Virology
, vol.328
, pp. 1-6
-
-
Kiselyeva, Y.1
Ito, Y.2
Lima, R.G.3
Grivel, J.C.4
Das, A.T.5
Berkhout, B.6
Margolis, L.B.7
-
48
-
-
29244474887
-
HIV vaccine design: Insights from live attenuated SIV vaccines
-
Koff, W. C., P. R. Johnson, D. I. Watkins, D. R. Burton, J. D. Lifson, K. J. Hasenkrug, A. B. McDermott, A. Schultz, T. J. Zamb, R. Boyle, and R. C. Desrosiers. 2006. HIV vaccine design: insights from live attenuated SIV vaccines. Nat. Immunol. 7:19-23.
-
(2006)
Nat. Immunol
, vol.7
, pp. 19-23
-
-
Koff, W.C.1
Johnson, P.R.2
Watkins, D.I.3
Burton, D.R.4
Lifson, J.D.5
Hasenkrug, K.J.6
McDermott, A.B.7
Schultz, A.8
Zamb, T.J.9
Boyle, R.10
Desrosiers, R.C.11
-
49
-
-
20844432390
-
Identification of attenuated variants of HIV-1 circulating recombinant form 01_AE that are associated with slow disease progression due to gross genetic alterations in the nef/long terminal repeat sequences
-
Kondo, M., T. Shima, M. Nishizawa, K. Sudo, S. Iwamuro, T. Okabe, Y. Takebe, and M. Imai. 2005. Identification of attenuated variants of HIV-1 circulating recombinant form 01_AE that are associated with slow disease progression due to gross genetic alterations in the nef/long terminal repeat sequences. J. Infect. Dis. 192:56-61.
-
(2005)
J. Infect. Dis
, vol.192
, pp. 56-61
-
-
Kondo, M.1
Shima, T.2
Nishizawa, M.3
Sudo, K.4
Iwamuro, S.5
Okabe, T.6
Takebe, Y.7
Imai, M.8
-
50
-
-
0034790979
-
+ lymphocytes in control of simian immunodeficiency virus infection and resistance to rechallenge after transient early antiretroviral treatment
-
+ lymphocytes in control of simian immunodeficiency virus infection and resistance to rechallenge after transient early antiretroviral treatment. J. Virol. 75:10187- 10199.
-
(2001)
J. Virol
, vol.75
, pp. 10187-10199
-
-
Lifson, J.D.1
Rossio, J.L.2
Piatak Jr., M.3
Parks, T.4
Li, L.5
Kiser, R.6
Coalter, V.7
Fisher, B.8
Flynn, B.M.9
Czajak, S.10
Hirsch, V.M.11
Reimann, K.A.12
Schmitz, J.E.13
Ghrayeb, J.14
Bischofberger, N.15
Nowak, M.A.16
Desrosiers, R.C.17
Wodarz, D.18
-
51
-
-
0028135456
-
A partially attenuated simian immunodeficiency virus induces host immunity that correlates with resistance to pathogenic virus challenge
-
Lohman, B. L., M. B. McChesney, C. J. Miller, E. McGowan, S. M. Joye, K. K. van Rompay, E. Reay, L. Antipa, N. C. Pedersen, and M. L. Marthas. 1994. A partially attenuated simian immunodeficiency virus induces host immunity that correlates with resistance to pathogenic virus challenge. J. Virol. 68:7021-7029.
-
(1994)
J. Virol
, vol.68
, pp. 7021-7029
-
-
Lohman, B.L.1
McChesney, M.B.2
Miller, C.J.3
McGowan, E.4
Joye, S.M.5
van Rompay, K.K.6
Reay, E.7
Antipa, L.8
Pedersen, N.C.9
Marthas, M.L.10
-
52
-
-
0029063578
-
-
+ T-cell clone (PM1): failure to downregulate CD4 and to interfere with cell-line-tropic HIV-1. J. Virol. 69:3712-3720.
-
+ T-cell clone (PM1): failure to downregulate CD4 and to interfere with cell-line-tropic HIV-1. J. Virol. 69:3712-3720.
-
-
-
-
53
-
-
0035932984
-
In vitro evolution of a highly replicating, doxycycline-dependent HIV for applications in vaccine studies
-
Marzio, G., K. Verhoef, M. Vink, and B. Berkhout. 2001. In vitro evolution of a highly replicating, doxycycline-dependent HIV for applications in vaccine studies. Proc. Natl. Acad. Sci. USA 98:6342-6347.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 6342-6347
-
-
Marzio, G.1
Verhoef, K.2
Vink, M.3
Berkhout, B.4
-
54
-
-
0036191195
-
Efficient human immunodeficiency virus replication requires a fine-tuned level of transcription
-
Marzio, G., M. Vink, K. Verhoef, A. de Ronde, and B. Berkhout. 2002. Efficient human immunodeficiency virus replication requires a fine-tuned level of transcription. J. Virol. 76:3084-3088.
-
(2002)
J. Virol
, vol.76
, pp. 3084-3088
-
-
Marzio, G.1
Vink, M.2
Verhoef, K.3
de Ronde, A.4
Berkhout, B.5
-
55
-
-
0032427481
-
Adaptation of the fluorogenic 5′-nuclease chemistry to a PCR-based reverse transcriptase assay
-
Maudru, T., and K. W. Peden. 1998. Adaptation of the fluorogenic 5′-nuclease chemistry to a PCR-based reverse transcriptase assay. BioTechniques 25:972-975.
-
(1998)
BioTechniques
, vol.25
, pp. 972-975
-
-
Maudru, T.1
Peden, K.W.2
-
56
-
-
0026573580
-
A general and fast method to generate multiple site directed mutations
-
Mikaelian, I., and A. Sergeant. 1992. A general and fast method to generate multiple site directed mutations. Nucleic Acids Res. 20:376.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 376
-
-
Mikaelian, I.1
Sergeant, A.2
-
57
-
-
0034633776
-
Live attenuated HIV vaccines: Proposal for further research and development
-
Mills, J., R. Desrosiers, E. Rud, and N. Almond. 2000. Live attenuated HIV vaccines: proposal for further research and development. AIDS Res. Hum. Retrovir. 16:1453-1461.
-
(2000)
AIDS Res. Hum. Retrovir
, vol.16
, pp. 1453-1461
-
-
Mills, J.1
Desrosiers, R.2
Rud, E.3
Almond, N.4
-
58
-
-
0029956642
-
Enhanced processivity of RNA polymerase II triggered by Tat-induced phosphorylation of its carboxy-terminal domain
-
Parada, C. A., and R. G. Roeder. 1996. Enhanced processivity of RNA polymerase II triggered by Tat-induced phosphorylation of its carboxy-terminal domain. Nature 384:375-378.
-
(1996)
Nature
, vol.384
, pp. 375-378
-
-
Parada, C.A.1
Roeder, R.G.2
-
61
-
-
15744404289
-
HIV-1 Tat stimulates transcription complex assembly through recruitment of TBP in the absence of TAFs
-
Raha, T., S. W. Cheng, and M. R. Green. 2005. HIV-1 Tat stimulates transcription complex assembly through recruitment of TBP in the absence of TAFs. PLoS Biol. 3:e44.
-
(2005)
PLoS Biol
, vol.3
-
-
Raha, T.1
Cheng, S.W.2
Green, M.R.3
-
62
-
-
0025222481
-
The complete nucleotide sequence of a pathogenic molecular clone of simian immunodeficiency virus
-
Regier, D. A., and R. C. Desrosiers. 1990. The complete nucleotide sequence of a pathogenic molecular clone of simian immunodeficiency virus. AIDS Res. Hum. Retrovir. 6:1221-1231.
-
(1990)
AIDS Res. Hum. Retrovir
, vol.6
, pp. 1221-1231
-
-
Regier, D.A.1
Desrosiers, R.C.2
-
63
-
-
0028015897
-
Functional significance of the dinucleotide bulge in stem-loop1 and stem-loop2 of HIV-2 TAR RNA
-
Rhim, H., and A. P. Rice. 1994. Functional significance of the dinucleotide bulge in stem-loop1 and stem-loop2 of HIV-2 TAR RNA. Virology 202:202-211.
-
(1994)
Virology
, vol.202
, pp. 202-211
-
-
Rhim, H.1
Rice, A.P.2
-
64
-
-
0033766992
-
Characterization of three nef-defective human immunodeficiency virus type 1 strains associated with long-term nonprogression
-
Rhodes, D. I., L. Ashton, A. Solomon, A. Carr, D. Cooper, J. Kaldor, N. Deacon, et al. 2000. Characterization of three nef-defective human immunodeficiency virus type 1 strains associated with long-term nonprogression. J. Virol. 74:10581-10588.
-
(2000)
J. Virol
, vol.74
, pp. 10581-10588
-
-
Rhodes, D.I.1
Ashton, L.2
Solomon, A.3
Carr, A.4
Cooper, D.5
Kaldor, J.6
Deacon, N.7
-
65
-
-
0037062495
-
TAR RNA loop: A scaffold for the assembly of a regulatory switch in HIV replication
-
Richter, S., Y. H. Ping, and T. M. Rana. 2002. TAR RNA loop: a scaffold for the assembly of a regulatory switch in HIV replication. Proc. Natl. Acad. Sci. USA 99:7928-7933.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 7928-7933
-
-
Richter, S.1
Ping, Y.H.2
Rana, T.M.3
-
66
-
-
30644466345
-
Factor correction as a tool to eliminate between-session variation in replicate experiments: Application to molecular biology and retrovirology
-
Ruijter, J. M., H. H. Thygesen, O. J. Schoneveld, A. T. Das, B. Berkhout, and W. H. Lamers. 2006. Factor correction as a tool to eliminate between-session variation in replicate experiments: application to molecular biology and retrovirology. Retrovirology 3:2.
-
(2006)
Retrovirology
, vol.3
, pp. 2
-
-
Ruijter, J.M.1
Thygesen, H.H.2
Schoneveld, O.J.3
Das, A.T.4
Berkhout, B.5
Lamers, W.H.6
-
67
-
-
11944264616
-
Direct evidence for translational regulation by leader RNA and Tat protein of human immunodeficiency virus type 1
-
SenGupta, D. N., B. Berkhout, A. Gatignol, A. M. Zhou, and R. H. Silverman. 1990. Direct evidence for translational regulation by leader RNA and Tat protein of human immunodeficiency virus type 1. Proc. Natl. Acad. Sci. USA 87:7492-7496.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 7492-7496
-
-
SenGupta, D.N.1
Berkhout, B.2
Gatignol, A.3
Zhou, A.M.4
Silverman, R.H.5
-
68
-
-
0035943707
-
Constitutively dead, conditionally live HIV-1 genomes. Ex vivo implications for a live virus vaccine
-
Smith, S. M., M. Khoroshev, P. A. Marx, J. Orenstein, and K. T. Jeang. 2001. Constitutively dead, conditionally live HIV-1 genomes. Ex vivo implications for a live virus vaccine. J. Biol. Chem. 276:32184-32190.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 32184-32190
-
-
Smith, S.M.1
Khoroshev, M.2
Marx, P.A.3
Orenstein, J.4
Jeang, K.T.5
-
69
-
-
0028034999
-
LA autoantigen alleviates translational repression by the 5′ leader sequence of the human immunodeficiency virus type 1 RNA
-
Svitkin, Y. V., A. Pause, and N. Sonenberg. 1994. LA autoantigen alleviates translational repression by the 5′ leader sequence of the human immunodeficiency virus type 1 RNA. J. Virol. 68:7001-7007.
-
(1994)
J. Virol
, vol.68
, pp. 7001-7007
-
-
Svitkin, Y.V.1
Pause, A.2
Sonenberg, N.3
-
70
-
-
18244423260
-
RNA recognition by HIV-1 Tat and Rev
-
Tan, R., A. Brodsky, J. R. Williamson, and A. D. Frankel. 1997. RNA recognition by HIV-1 Tat and Rev. Semin. Virol. 8:186-193.
-
(1997)
Semin. Virol
, vol.8
, pp. 186-193
-
-
Tan, R.1
Brodsky, A.2
Williamson, J.R.3
Frankel, A.D.4
-
71
-
-
0033053593
-
Functional domains of Tat required for efficient human immunodeficiency type 1 reverse transcription
-
Ulich, C., A. Dunne, E. Parry, C. W. Hooker, R. B. Gaynor, and D. Harrich. 1999. Functional domains of Tat required for efficient human immunodeficiency type 1 reverse transcription. J. Virol. 73:2499-2508.
-
(1999)
J. Virol
, vol.73
, pp. 2499-2508
-
-
Ulich, C.1
Dunne, A.2
Parry, E.3
Hooker, C.W.4
Gaynor, R.B.5
Harrich, D.6
-
72
-
-
0030703134
-
Determination of the minimal amount of Tat activity required for human immunodeficiency virus type 1 replication
-
Verhoef, K., M. Koper, and B. Berkhout. 1997. Determination of the minimal amount of Tat activity required for human immunodeficiency virus type 1 replication. Virology 237:228-236.
-
(1997)
Virology
, vol.237
, pp. 228-236
-
-
Verhoef, K.1
Koper, M.2
Berkhout, B.3
-
73
-
-
0035163747
-
Strict control of human immunodeficiency virus type 1 replication by a genetic switch: Tet for Tat
-
Verhoef, K., G. Marzio, W. Hillen, H. Bujard, and B. Berkhout. 2001. Strict control of human immunodeficiency virus type 1 replication by a genetic switch: Tet for Tat. J. Virol. 75:979-987.
-
(2001)
J. Virol
, vol.75
, pp. 979-987
-
-
Verhoef, K.1
Marzio, G.2
Hillen, W.3
Bujard, H.4
Berkhout, B.5
-
74
-
-
0032548918
-
A novel CDK9-associated C-type cyclin interacts directly with HIV-1 Tat and mediates its high-affinity, loop-specific binding to TAR RNA
-
Wei, P., M. E. Garber, S.-M. Fang, W. H. Fisher, and K. A. Jones. 1998. A novel CDK9-associated C-type cyclin interacts directly with HIV-1 Tat and mediates its high-affinity, loop-specific binding to TAR RNA. Cell 92:451-462.
-
(1998)
Cell
, vol.92
, pp. 451-462
-
-
Wei, P.1
Garber, M.E.2
Fang, S.-M.3
Fisher, W.H.4
Jones, K.A.5
-
75
-
-
0029031494
-
Repair and evolution of nef in vivo modulates simian immunodeficiency virus virulence
-
Whatmore, A. M., N. Cook, G. A. Hall, S. Sharpe, E. W. Rud, and M. P. Cranage. 1995. Repair and evolution of nef in vivo modulates simian immunodeficiency virus virulence. J. Virol. 69:5117-5123.
-
(1995)
J. Virol
, vol.69
, pp. 5117-5123
-
-
Whatmore, A.M.1
Cook, N.2
Hall, G.A.3
Sharpe, S.4
Rud, E.W.5
Cranage, M.P.6
-
76
-
-
3042819783
-
Live attenuated HIV vaccines: Pitfalls and prospects
-
Whitney, J. B., and R. M. Ruprecht. 2004. Live attenuated HIV vaccines: pitfalls and prospects. Curr. Opin. Infect. Dis. 17:17-26.
-
(2004)
Curr. Opin. Infect. Dis
, vol.17
, pp. 17-26
-
-
Whitney, J.B.1
Ruprecht, R.M.2
-
77
-
-
0029951823
-
Vaccine protection by a triple deletion mutant of simian immunodeficiency virus
-
Wyand, M. S., K. H. Manson, M. Garcia-Moll, D. Montefiori, and R. C. Desrosiers. 1996. Vaccine protection by a triple deletion mutant of simian immunodeficiency virus. J. Virol. 70:3724-3733.
-
(1996)
J. Virol
, vol.70
, pp. 3724-3733
-
-
Wyand, M.S.1
Manson, K.H.2
Garcia-Moll, M.3
Montefiori, D.4
Desrosiers, R.C.5
-
78
-
-
0242300120
-
The Tat/TAR-dependent phosphorylation of RNA polymerase II C-terminal domain stimulates cotranscriptional capping of HIV-1 mRNA
-
Zhou, M., L. Deng, F. Kashanchi, J. N. Brady, A. J. Shatkin, and A. Kumar. 2003. The Tat/TAR-dependent phosphorylation of RNA polymerase II C-terminal domain stimulates cotranscriptional capping of HIV-1 mRNA. Proc. Natl. Acad. Sci. USA 100:12666-12671.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 12666-12671
-
-
Zhou, M.1
Deng, L.2
Kashanchi, F.3
Brady, J.N.4
Shatkin, A.J.5
Kumar, A.6
-
79
-
-
33751247662
-
Modification of the Tet-On regulatory system prevents the conditional-live HIV-1 variant from losing doxycycline-control
-
Zhou, X., M. Vink, B. Berkhout, and A. T. Das. 2006. Modification of the Tet-On regulatory system prevents the conditional-live HIV-1 variant from losing doxycycline-control. Retrovirology 3:82.
-
(2006)
Retrovirology
, vol.3
, pp. 82
-
-
Zhou, X.1
Vink, M.2
Berkhout, B.3
Das, A.T.4
-
80
-
-
33748854037
-
Optimization of the Tet-On system for regulated gene expression through viral evolution
-
Zhou, X., M. Vink, B. Klaver, B. Berkhout, and A. T. Das. 2006. Optimization of the Tet-On system for regulated gene expression through viral evolution. Gene Ther. 13:1382-1390.
-
(2006)
Gene Ther
, vol.13
, pp. 1382-1390
-
-
Zhou, X.1
Vink, M.2
Klaver, B.3
Berkhout, B.4
Das, A.T.5
-
81
-
-
33745190519
-
The genetic stability of a conditional-live HIV-1 variant can be improved by mutations in the Tet-On regulatory system that restrain evolution
-
Zhou, X., M. Vink, B. Klaver, K. Verhoef, G. Marzio, A. T. Das, and B. Berkhout. 2006. The genetic stability of a conditional-live HIV-1 variant can be improved by mutations in the Tet-On regulatory system that restrain evolution. J. Biol. Chem. 281:17084-17091.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 17084-17091
-
-
Zhou, X.1
Vink, M.2
Klaver, B.3
Verhoef, K.4
Marzio, G.5
Das, A.T.6
Berkhout, B.7
|