Sequential structures provide insights into the fidelity of RNA replication

Proceedings of the National Academy of Sciences of the United States of America

Volumn 104, Issue 22, 2007, Pages 9463-9468

  Ferrer Orta, Cristina ^a   Arias, Armando ^b   Pérez Luque, Rosa ^a   Escarmis, Cristina ^b   Domingo, Esteban ^b   Verdaguer, Nuria ^a  

^a INSTITUT DE BIOLOGIA MOLECULAR DE BARCELONA   (Spain)

^b CENTRO DE BIOLOGÍA MOLECULAR SEVERO OCHOA   (Spain)

Author keywords

5 fluorouracil; Foot and mouth disease virus; Replication fidelity; Ribavirin; RNA elongation

Indexed keywords

ADENOSINE TRIPHOSPHATE; AMINO ACID; FLUOROURACIL; FLUOROURIDINE TRIPHOSPHATE; NUCLEOTIDE; RIBAVIRIN; RIBAVIRIN TRIPHOSPHATE; RNA DIRECTED RNA POLYMERASE; UNCLASSIFIED DRUG; URIDINE TRIPHOSPHATE; VIRUS RNA;

ARTICLE; FOOT AND MOUTH DISEASE VIRUS; MOLECULAR RECOGNITION; MUTAGENESIS; NONHUMAN; PRIORITY JOURNAL; RNA REPLICATION; RNA SYNTHESIS; RNA VIRUS; VIRUS REPLICATION; BIOSYNTHESIS; CATALYSIS; CHEMISTRY; CONFORMATION; GENETICS; METABOLISM; NUCLEOTIDE SEQUENCE; PHYSIOLOGY;

FOOT-AND-MOUTH DISEASE VIRUS; RNA VIRUSES;

ADENOSINE TRIPHOSPHATE; BASE SEQUENCE; CATALYSIS; FOOT-AND-MOUTH DISEASE VIRUS; NUCLEIC ACID CONFORMATION; RNA, VIRAL; URIDINE TRIPHOSPHATE; VIRUS REPLICATION;

EID: 34547178347     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0700518104     Document Type: Article

References (38)

1. Eigen M (2002) Proc Natl Acad Sci USA 99:13374-13376.
2. Anderson JP, Daifuku R, Loeb LA (2004) Annu Rev Microbiol 58:183-205.
3. Domingo E, ed (2005) Virus Res 107:115-228.
4. Airaksinen A, Pariente N, Menendez-Arias L, Domingo E (2003) Virology 311:339-349.
5. Pariente N, Sierra S, Lowenstein PR, Domingo E (2001) J Virol 75:9723-9730.
6. Pariente N, Airaksinen A, Domingo E (2003) J Virol 77:7131-7138.
7. Sierra S, Davila M, Lowenstein PR, Domingo E (2000) J Virol 74:8316-8323.
8. Crotty S, Maag D, Arnold JJ, Zhong W, Lau JY, Hong Z, Andino R, Cameron CE (2000) Nat Med 6:1375-1379.
9. Graci JD, Cameron CE (2006) Rev Med Virol 16:37-48.
10. Parker WB (2005) Virus Res 107:165-171.
11. Perelson AS, Ribeiro RM (2005) J Hepatol 43:553-555.
12. Ferrer-Orta C, Arias A, Perez-Luque R, Escarmis C, Domingo E, Verdaguer N (2004) J Biol Chem 279:47212-47221.
13. Ferrer-Orta C, Arias A, Escarmis C, Verdaguer N (2006) Curr Opin Struct Biol 16:27-34.
14. Ferrer-Orta C, Arias A, Agudo R, Perez-Luque R, Escarmis C, Domingo E, Verdaguer N (2006) EMBO J 25:880-888.
15. Brautigam CA, Steitz TA (1998) J Mol Biol 277:363-377.
16. Johnson SJ, Taylor JS, Beese LS (2003) Proc Natl Acad Sci USA 100:3895-3900.
17. Huang H, Chopra R, Verdine GL, Harrison SC (1998) Science 282:1669-1675.
18. Butcher SJ, Grimes JM, Makeyev EV, Bamford D, Stuart DI (2001) Nature 410:235-240.
19. Tao Y, Farsetta DL, Nibert ML, Harrison SC (2002) Cell 111:733-745.
20. Vande Berg BJ, Beard WA, Wilson SH (2001) J Biol Chem 276:3408-3416.
21. Ding J, Das K, Hsiou Y, Sarafianos SG, Clark AD, Jr, Jacobo-Molina A, Tantillo C, Hughes SH, Arnold E (1998) J Mol Biol 284:1095-1111.
22. Gohara DW, Crotty S, Arnold JJ, Yoder JD, Andino R, Cameron CE (2000) J Biol Chem 275:25523-25532.
23. Gohara DW, Arnold JJ, Cameron CE (2004) Biochemistry 43:5149-5158.
24. Arnold JJ, Vignuzzi M, Stone JK, Andino R, Cameron CE (2005) J Biol Chem 280:25706-25716.
25. Doublie S, Tabor S, Long AM, Richardson CC, Ellenberger T (1998) Nature 391:251-258.
26. Yin YW, Steitz TA (2002) Science 298:1387-1395.
27. Sierra M, Airaksinen A, Gonzalez-Lopez C, Agudo R, Arias A, Domingo E (2007) J Virol 81:2012-2024.
28. Harris D, Kaushik N, Pandey PK, Yadav PN, Pandey VN (1998) J Biol Chem 273:33624-33634.
29. Osheroff WP, Beard WA, Wilson SH, Kunkel TA (1999) J Biol Chem 274:20749-20752.
30. Kim B, Ayran JC, Sagar SG, Adman ET, Fuller SM, Tran NH, Horrigan J (1999) J Biol Chem 274:27666-27673.
31. Kim TW, Brieba LG, Ellenberger T, Kool ET (2006) J Biol Chem 281:2289-2295.
32. Arnold JJ, Cameron CE (2000) J Biol Chem 275:5329-5336.
33. Otwinowski Z, Minor W (1997) Methods Enzymol 276:307-326.
34. Brunger AT, Adams PD, Clore GM, DeLano WL, Gros P, Grosse-Kunstleve RW, Jiang JS, Kuszewski J, Nilges M, Pannu NS (1998) Acta Crystallogr D 54:905-921.
35. Roussel A, Cambillau C (1989) Turbo-Frodo, Silicons Graphics Geometry Partners Directory (Silicons Graphics, Mountain View, CA), pp 77-79.
36. Navaza J (1994) Acta Crystallogr A 50:150-162.
37. Murshudov GV, Vagin AA, Dodson, EJ (1997) Acta Crystallogr D 53:240-255.
38. Jones TA, Zou JY, Cowan SW, Kjeldgaard M (1991) Acta Crystallogr A 47:110.