Localization of AU-rich element-containing mRNA in cytoplasmic granules containing exosome subunits

Journal of Biological Chemistry

Volumn 282, Issue 27, 2007, Pages 19958-19968

  Lin, Wei Jye ^a   Duffy, Aaron ^a   Chen, Ching Yi ^a  

^a UNIVERSITY OF ALABAMA AT BIRMINGHAM   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOPLASMIC PROCESSING; CYTOPLASMIC PROCESSING BODIES (P BODIES); DECAY FACTORS; MAMMALIAN CELLS;

ANIMAL CELL CULTURE; BIOCHEMISTRY; DEGRADATION; ENZYME INHIBITION; RNA;

BIOMOLECULES;

ADENOSINE PHOSPHATE; DEADENYLASE; DECAY ACCELERATING FACTOR; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D; MESSENGER RNA; POLYADENYLATED RNA; UNCLASSIFIED DRUG; URIDINE PHOSPHATE;

3' UNTRANSLATED REGION; 5' UNTRANSLATED REGION; ADENYLATION; ARTICLE; CELL GRANULE; CELL STRUCTURE; CONTROLLED STUDY; EXOSOME; GENE FUNCTION; GENE LOCATION; GENETIC TRANSFECTION; HUMAN; HUMAN CELL; NORTHERN BLOTTING; PRIORITY JOURNAL; PROTEIN BINDING; REPORTER GENE; RNA ISOLATION;

3' UNTRANSLATED REGIONS; CYTOPLASMIC GRANULES; HELA CELLS; HUMANS; POLY A; RIBONUCLEASES; RNA STABILITY; RNA, SMALL INTERFERING; RNA-BINDING PROTEINS;

EUKARYOTA; MAMMALIA;

EID: 34547136721     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M702281200     Document Type: Article

References (46)

1. Wilusz, C. J., Wormington, M., and Peltz, S. W. (2001) Nat. Rev. Mol. Cell Biol. 2, 237-246
2. Wilusz, C. J., and Wilusz, J. (2004) Trends Genet. 20, 491-497
3. Parker, R., and Song, H. (2004) Nat. Struct. Mol. Biol. 11, 121-127
4. Tucker, M., Valencia-Sanchez, M. A., Staples, R. R., Chen, J., Denis, C. L., and Parker, R. (2001) Cell 104, 377-386
5. Mitchell, P., Petfalski, E., Shevchenko, A., Mann, M., and Tollervey, D. (1997) Cell 91, 457-466
6. Liu, Q., Greimann, J. C., and Lima, C. D. (2006) Cell 127, 1223-1237
7. Sheth, U., and Parker, R. (2003) Science 300, 805-808
8. Brengues, M., Teixeira, D., and Parker, R. (2005) Science 310, 486-489
9. van Dijk, E., Cougot, N., Meyer, S., Babajko, S., Wahle, E., and Seraphin, B. (2002) EMBO J. 21, 6915-6924
10. Wang, Z., Jiao, X., Carr-Schmid, A., and Kiledjian, M. (2002) Proc. Natl. Acad. Sci. U. S. A. 99, 12663-12668
11. Lykke-Andersen, J. (2002) Mol. Cell. Biol. 22, 8114-8121
12. Bashkirov, V. I., Scherthan, H., Solinger, J. A., Buerstedde, J. M., and Heyer, W. D. (1997) J. Cell Biol. 136, 761-773
13. Allmang, C., Petfalski, E., Podtelejnikov, A., Mann, M., Tollervey, D., and Mitchell, P. (1999) Genes Dev. 13, 2148-2158
14. Chen, C. Y., Gherzi, R., Ong, S. E., Chan, E. L., Raijmakers, R., Pruijn, G. J., Stoecklin, G., Moroni, C., Mann, M., and Karin, M. (2001) Cell 107, 451-464
15. Chen, J., Chiang, Y. C., and Denis, C. L. (2002) EMBO J. 21, 1414-1426
16. Uchida, N., Hoshino, S., and Katada, T. (2004) J. Biol. Chem. 279, 1383-1391
17. Körner, C. G., Wormington, M., Muckenthaler, M., Schneider, S., Dehlin, E., and Wahle, E. (1998) EMBO J. 17, 5427-5437
18. Chang, T. C., Yamashita, A., Chen, C. Y., Yamashita, Y., Zhu, W., Durdan, S., Kahvejian, A., Sonenberg, N., and Shyu, A. B. (2004) Genes Dev. 18, 2010-2023
19. Yamashita, A., Chang, T. C., Yamashita, Y., Zhu, W., Zhong, Z., Chen, C. Y., and Shyu, A. B. (2005) Nat. Struct. Mol. Biol. 12, 1054-1063
20. Lejeune, F., Li, X., and Maquat, L. E. (2003) Mol. Cell 12, 675-687
21. Unterholzner, L., and Izaurralde, E. (2004) Mol. Cell 16, 587-596
22. Ingelfinger, D., Arndt-Jovin, D. J., Luhrmann, R., and Achsel, T. (2002) RNA 8, 1489-1501
23. Eystathioy, T., Jakymiw, A., Chan, E. K., Seraphin, B., Cougot, N., and Fritzler, M. J. (2003) RNA 9, 1171-1173
24. Cougot, N., Babajko, S., and Seraphin, B. (2004) J. Cell Biol. 165, 31-40
25. Chen, C. Y., and Shyu, A. B. (1995) Trends Biochem. Sci. 20, 465-470
26. Bakheet, T., Williams, B. R., and Khabar, K. S. (2003) Nucleic Acids Res. 31, 421-423
27. Bevilacqua, A., Ceriani, M. C., Capaccioli, S., and Nicolin, A. (2003) J. Cell. Physiol. 195, 356-372
28. Barreau, C., Paillard, L., and Osborne, H. B. (2005) Nucleic Acids Res. 33, 7138-7150
29. Gherzi, R., Lee, K. Y., Briata, P., Wegmuller, D., Moroni, C., Karin, M., and Chen, C. Y. (2004) Mol. Cell 14, 571-583
30. Lykke-Andersen, J., and Wagner, E. (2005) Genes Dev. 19, 351-361
31. Chou, C. F., Mulky, A., Maitra, S., Lin, W. J., Gherzi, R., Kappes, J., and Chen, C. Y. (2006) Mol. Cell. Biol. 26, 3695-3706
32. Gao, M., Fritz, D. T., Ford, L. P., and Wilusz, J. (2000) Mol. Cell 5, 479-488
33. Mukherjee, D., Gao, M., O'Connor, J. P., Raijmakers, R., Pruijn, G., Lutz, C. S., and Wilusz, J. (2002) EMBO J. 21, 165-174
34. Wang, Z., and Kiledjian, M. (2001) Cell 107, 751-762
35. Stoecklin, G., Mayo, T., and Anderson, P. (2006) EMBO Rep. 7, 72-77
36. Murray, E. L., and Schoenberg, D. R. (2007) Mol. Cell. Biol. 27, 2791-2799
37. Brouwer, R., Allmang, C., Raijmakers, R., van Aarssen, Y., Egberts, W. V., Petfalski, E., van Venrooij, W. J., Tollervey, D., and Pruijn, G. J. (2001) J. Biol. Chem. 276, 6177-6184
38. Raijmakers, R., Egberts, W. V., van Venrooij, W. J., and Pruijn, G. J. (2003) J. Biol. Chem. 278, 30698-30704
39. Kedersha, N., Stoecklin, G., Ayodele, M., Yacono, P., Lykke-Andersen, J., Fitzler, M. J., Scheuner, D., Kaufman, R. J., Golan, D. E., and Anderson, P. (2005) J. Cell Biol. 169, 871-884
40. Graham, A. C., Kiss, D. L., and Andrulis, E. D. (2006) Mol. Biol. Cell 17, 1399-1409
41. Yang, Z., Jakymiw, A., Wood, M. R., Eystathioy, T., Rubin, R. L., Fritzler, M. J., and Chan, E. K. (2004) J. Cell Sci. 117, 5567-5578
42. Winzen, R., Kracht, M., Ritter, B., Wilhelm, A., Chen, C. Y., Shyu, A. B., Muller, M., Gaestel, M., Resch, K., and Holtmann, H. (1999) EMBO J. 18, 4969-4980
43. Lasa, M., Mahtani, K. R., Finch, A., Brewer, G., Saklatvala, J., and Clark, A. R. (2000) Mol. Cell. Biol. 20, 4265-4274
44. van Hoof, A., and Parker, R. (1999) Cell 99, 347-350
45. Mitchell, P., and Tollervey, D. (2000) Nat. Struct. Biol. 7, 843-846
46. Franks, T. M., and Lykke-Andersen, J. (2007) Genes Dev. 21, 719-735