Introns regulate the rate of unstable mRNA decay

Journal of Biological Chemistry

Volumn 282, Issue 28, 2007, Pages 20230-20237

  Zhao, Chenyang ^a   Hamilton, Thomas ^a  

^a LERNER RESEARCH INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CELL CULTURE; DEGRADATION; GENES; RATE CONSTANTS; RNA;

CYTOPLASMIC TRANSPORT; DIFFERENTIAL DECAY RATES; GENOMIC CLONE; INTRON SEQUENCES;

PROTEINS;

COMPLEMENTARY DNA; CXCL1 CHEMOKINE; MESSENGER RNA;

ANIMAL CELL; ARTICLE; CELL TYPE; EMBRYO; GENETIC TRANSCRIPTION; GENOMICS; HUMAN; HUMAN CELL; INTRON; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; RNA SEQUENCE;

3' UNTRANSLATED REGIONS; ACTIVE TRANSPORT, CELL NUCLEUS; CELL LINE; CELL NUCLEUS; CHEMOKINES, CXC; DNA, COMPLEMENTARY; HUMANS; INTERLEUKIN-1; INTRONS; PROTEIN BIOSYNTHESIS; RNA STABILITY; RNA, MESSENGER;

EUKARYOTA;

EID: 34547109901     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M700180200     Document Type: Article

References (52)

1. Nathan, C. (2002) Nature 420, 846-852
2. Tsuruta, L., Arai, N., and Arai, K. (1998) Int. Rev. Immunol. 16, 581-616
3. Viola, J. P., and Rao, A. (1999) J. Clin. Immunol. 19, 98-108
4. Seko, Y., Cole, S., Kasprzak, W., Shapiro, B. A., and Ragheb, J. A. (2006) Autoimmun. Rev. 5, 299-305
5. Neininger, A., Kontoyiannis, D., Kotlyarov, A., Winzen, R., Eckert, R., Volk, H. D., Holtmann, H., Kollias, G., and Gaestel, M. (2002) J. Biol. Chem. 277, 3065-3068
6. Shim, J., and Karin, M. (2002) Mol. Cells 14, 323-331
7. Clark, A. (2000) Arthritis Res. 2, 172-174
8. Carrick, D. M., Lai, W. S., and Blackshear, P. J. (2004) Arthritis Res. Ther. 6, 248-264
9. Conne, B., Stutz, A., and Vassalli, J. D. (2000) Nat. Med. 6, 637-641
10. Newbury, S. F. (2006) Biochem. Soc. Trans. 34, 30-34
11. Shaw, G., and Kamen, R. (1986) Cell 46, 659-667
12. Chen, C.-Y. A., and Shyu, A.-B. (1995) Trends Biochem. Sci. 20, 465-470
13. Kruys, V., Marinx, O., Shaw, G., Deschamps, J., and Huez, G. (1989) Science 245, 852-855
14. Tebo, J., Datta, S., Kishore, R., Kolosov, M., Major, J. A., Ohmori, Y., and Hamilton, T. A. (2000) J. Biol. Chem. 275, 12987-12993
15. Holtmann, H., Winzen, R., Holland, P., Eickemeier, S., Hoffmann, E., Wallach, D., Malinin, N. L., Cooper, J. A., Resch, K., and Kracht, M. (1999) Mol. Cell. Biol. 19, 6742-6753
16. Saklatvala, J., Dean, J., and Clark, A. (2003) Biochem. Soc. Symp. 70, 95-106
17. Anderson, P., Phillips, K., Stoecklin, G., and Kedersha, N. (2004) J. Leukocyte Biol. 76, 42-47
18. Kontoyiannis, D., Pasparakis, M., Pizarro, T. T., Cominelli, F., and Kollias, G. (1999) Immunity 10, 387-398
19. Taylor, G. A., Carballo, E., Lee, D. M., Lai, W. S., Thompson, M. J., Patel, D. D., Schenkman, D. I., Gilkeson, G. S., Broxmeyer, H. E., Haynes, B. F., and Blackshear, P. J. (1996) Immunity 4, 445-454
20. Buchman, A. R., and Berg, P. (1988) Mol. Cell. Biol. 8, 4395-4405
21. Le Hir, H., Nott, A., and Moore, M. J. (2003) Trends Biochem. Sci. 28, 215-220
22. Nott, A., Meislin, S. H., and Moore, M. J. (2003) RNA 9, 607-617
23. Fong, Y. W., and Zhou, Q. (2001) Nature 414, 929-933
24. Huang, M. T., and Gorman, C. M. (1990) Nucleic Acids Res. 18, 937-947
25. Proudfoot, N. J. (2001) EMBO Rep. 2, 891-892
26. Luo, M. J., and Reed, R. (1999) Proc. Natl. Acad. Sci. U. S. A. 96, 14937-14942
27. Le Hir, H., Gatfield, D., Izaurralde, E., and Moore, M. J. (2001)EMBO J. 20, 4987-4997
28. Bourdon, V., Harvey, A., and Lonsdale, D. M. (2001) EMBO Rep. 2, 394-398
29. Nott, A., Le Hir, H., and Moore, M. J. (2004) Genes Dev. 18, 210-222
30. Lejeune, F., and Maquat, L. E. (2005) Curr. Opin. Cell Biol. 17, 309-315
31. Maquat, L. E. (2004) Nat. Rev. Mol. Cell Biol. 5, 89-99
32. Lykke-Andersen, J., Shu, M. D., and Steitz, J. A. (2000) Cell 103, 1121-1131
33. Wang, H. F., Feng, L., and Niu, D. K. (2007) Biochem. Biophys. Res. Commun. 354, 203-208
34. Datta, S., Novotny, M., Li, X., Tebo, J., and Hamilton, T. A. (2004) J. Immunol. 173, 2755-2761
35. Biswas, R., Datta, S., Gupta, J. D., Novotny, M., Tebo, J., and Hamilton, T. A. (2003) J. Immunol. 170, 6202-6208
36. Novotny, M., Datta, S., Biswas, R., and Hamilton, T. (2005) J. Biol. Chem. 280, 30166-30174
37. Mandal, P., and Hamilton, T. (2007) J. Immunol. 178, 2542-2548
38. van Ooyen, A., van den Berg, J., Mantei, N., and Weissmann, C. (1979) Science 206, 337-344
39. Armstrong, D. A., Major, J. A., Chudyk, A., and Hamilton, T. A. (2004) J. Leukocyte Biol. 75, 641-648
40. Ohmori, Y., and Hamilton, T. A. (1994) Biochem. Biophys. Res. Commun. 2, 590-596
41. Sica, A., Saccani, A., Borsatti, A., Power, C. A., Wells, T. N. C., Luini, W., Polentarutti, N., Sozzani, S., and Mantovani, A. (1997) J. Exp. Med. 185, 969-974
42. Xu, L., Rahimpour, R., Ran, L., Kong, C., Biragyn, A., Andrews, J., Devries, M., Wang, J. M., and Kelvin, D. J. (1997) J. Leukocyte Biol. 62, 653-660
43. Rose, A. B., and Beliakoff, J. A. (2000) Plant Physiol. 122, 535-542
44. Hillman, R. T., Green, R. E., and Brenner, S. E. (2004) Genome Biol. 5, R8-R16
45. Mendell, J. T., Sharifi, N. A., Meyers, J. L., Martinez-Murillo, F., and Dietz, H. C. (2004) Nat. Genet. 36, 1073-1078
46. Bakheet, T., Williams, B. R., and Khabar, K. S. (2006) Nucleic Acids Res. 34, D111-D114
47. Le Hir, H., Izaurralde, E., Maquat, L. E., and Moore, M. J. (2000) EMBO J. 19, 6860-6869
48. Le Hir, H., Gatfield, D., Braun, I. C., Forler, D., and Izaurralde, E. (2001) EMBO Rep. 2, 1119-1124
49. Ishigaki, Y., Li, X., Serin, G., and Maquat, L. E. (2001) Cell 106, 607-617
50. Chou, C. F., Mulky, A., Maitra, S., Lin, W. J., Gherzi, R., Kappes, J., and Chen, C. Y. (2006) Mol. Cell. Biol. 26, 3695-3706
51. Lykke-Andersen, J., and Wagner, E. (2005) Genes Dev. 19, 351-361
52. Garneau, N. L., Wilusz, J., and Wilusz, C. J. (2007) Nat. Rev. Mol. Cell Biol. 8, 113-126