메뉴 건너뛰기




Volumn 153, Issue 7, 2007, Pages 2052-2066

Comparative genomic hybridization and physiological characterization of environment isolates indicate that significant (eco-)physiological properties are highly conserved in the species Escherichia coli

Author keywords

[No Author keywords available]

Indexed keywords

AMPICILLIN; GENTAMICIN; STREPTOMYCIN; SULFONAMIDE; TETRACYCLINE;

EID: 34447500551     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/mic.0.2006/002006-0     Document Type: Article
Times cited : (24)

References (81)
  • 1
    • 0021711731 scopus 로고
    • Simple, rapid, and quantitative release of periplasmic proteins by chloroform
    • Ames, G. F., Prody, C. & Kustu, S. (1984). Simple, rapid, and quantitative release of periplasmic proteins by chloroform. J Bacteriol 160, 1181-1183.
    • (1984) J Bacteriol , vol.160 , pp. 1181-1183
    • Ames, G.F.1    Prody, C.2    Kustu, S.3
  • 2
    • 0042766188 scopus 로고    scopus 로고
    • Comparative genomic indexing reveals the phylogenomics of Escherichia coli pathogens
    • Anjum, M. F., Lucchini, S., Thompson, A., Hinton, J. C. & Woodward, M. J. (2003). Comparative genomic indexing reveals the phylogenomics of Escherichia coli pathogens. Infect Immun 71, 4674-4683.
    • (2003) Infect Immun , vol.71 , pp. 4674-4683
    • Anjum, M.F.1    Lucchini, S.2    Thompson, A.3    Hinton, J.C.4    Woodward, M.J.5
  • 3
    • 0031963154 scopus 로고    scopus 로고
    • Distribution of chromosome length variation in natural isolates of Escherichia coli
    • Bergthorsson, U. & Ochman, H. (1998). Distribution of chromosome length variation in natural isolates of Escherichia coli. Mol Biol Evol 15, 6-16.
    • (1998) Mol Biol Evol , vol.15 , pp. 6-16
    • Bergthorsson, U.1    Ochman, H.2
  • 4
    • 0031670734 scopus 로고    scopus 로고
    • Berlyn, M. K. (1998). Linkage map of Escherichia coli K-12, edition 10: The traditional map. Microbiol Mol Biol Rev 62, 814-984.
    • Berlyn, M. K. (1998). Linkage map of Escherichia coli K-12, edition 10: The traditional map. Microbiol Mol Biol Rev 62, 814-984.
  • 5
    • 0008765790 scopus 로고
    • The genus Escherichia
    • Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K.-H. Schleifer. New York: Springer Verlag
    • Bettelheim, K. A. (1992). The genus Escherichia. In The Prokaryotes, pp. 2696-2736. Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K.-H. Schleifer. New York: Springer Verlag.
    • (1992) The Prokaryotes , pp. 2696-2736
    • Bettelheim, K.A.1
  • 6
    • 0024460308 scopus 로고
    • Close association of verotoxin (Shiga-like toxin) production with enterohemolysin production in strains of Escherichia coli
    • Beutin, L., Montenegro, M. A., Orskov, I., Orskov, F., Prada, J., Zimmermann, S. & Stephan, R. (1989). Close association of verotoxin (Shiga-like toxin) production with enterohemolysin production in strains of Escherichia coli. J Clin Microbiol 27, 2559-2564.
    • (1989) J Clin Microbiol , vol.27 , pp. 2559-2564
    • Beutin, L.1    Montenegro, M.A.2    Orskov, I.3    Orskov, F.4    Prada, J.5    Zimmermann, S.6    Stephan, R.7
  • 7
    • 15444350252 scopus 로고    scopus 로고
    • Blattner, F. R., Plunkett, G, III, Bloch, C., Perna, N, Burland, V., Riley, M., Collado-Vides, J., Glasner, J, Rode, C. & other authors (1997). The complete genome sequence of Escherichia coli K-12. Science 277, 1453-1462.
    • Blattner, F. R., Plunkett, G, III, Bloch, C., Perna, N, Burland, V., Riley, M., Collado-Vides, J., Glasner, J, Rode, C. & other authors (1997). The complete genome sequence of Escherichia coli K-12. Science 277, 1453-1462.
  • 8
    • 0028069540 scopus 로고
    • Excision of large DNA regions termed pathogenicity islands from tRNA-specific loci in the chromosome of an Escherichia coli wild-type pathogen
    • Blum, G., Ott, M., Lischewski, A., Ritter, A., Imrich, H., Tschape, H. & Hacker, J. (1994). Excision of large DNA regions termed pathogenicity islands from tRNA-specific loci in the chromosome of an Escherichia coli wild-type pathogen. Infect Immun 62, 606-614.
    • (1994) Infect Immun , vol.62 , pp. 606-614
    • Blum, G.1    Ott, M.2    Lischewski, A.3    Ritter, A.4    Imrich, H.5    Tschape, H.6    Hacker, J.7
  • 10
    • 25444518699 scopus 로고    scopus 로고
    • A generic approach for the design of whole-genome oligoarrays, validated for genomotyping, deletion mapping and gene expression analysis on Staphylococcus aureus
    • Charbonnier, Y., Gettler, B., Patrice François, P., Bento, M., Renzoni, A., Vaudaux, P., Schlegel, W. & Schrenzel, J. (2005). A generic approach for the design of whole-genome oligoarrays, validated for genomotyping, deletion mapping and gene expression analysis on Staphylococcus aureus. BMC Genomics 6, 95.
    • (2005) BMC Genomics , vol.6 , pp. 95
    • Charbonnier, Y.1    Gettler, B.2    Patrice François, P.3    Bento, M.4    Renzoni, A.5    Vaudaux, P.6    Schlegel, W.7    Schrenzel, J.8
  • 11
    • 4344634337 scopus 로고    scopus 로고
    • Positive selection for loss of RpoS function in Escherichia coli
    • Chen, G., Patten, C. L. & Schellhorn, H. E. (2004). Positive selection for loss of RpoS function in Escherichia coli. Mutat Res 554, 193-203.
    • (2004) Mutat Res , vol.554 , pp. 193-203
    • Chen, G.1    Patten, C.L.2    Schellhorn, H.E.3
  • 12
    • 0033775633 scopus 로고    scopus 로고
    • Rapid and simple determination of the Escherichia coli phylogenetic group
    • Clermont O., Bonacorsi, S. & Bingen, E. (2000). Rapid and simple determination of the Escherichia coli phylogenetic group. Appl Environ Microbiol 66, 4555-4558.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 4555-4558
    • Clermont, O.1    Bonacorsi, S.2    Bingen, E.3
  • 13
    • 0034641929 scopus 로고    scopus 로고
    • The population genetics of ecological specialization in evolving Escherichia coli populations
    • Cooper, V. S. & Lenski, R. E. (2000). The population genetics of ecological specialization in evolving Escherichia coli populations. Nature 407, 736-739.
    • (2000) Nature , vol.407 , pp. 736-739
    • Cooper, V.S.1    Lenski, R.E.2
  • 14
    • 33750810896 scopus 로고    scopus 로고
    • The tree of one percent
    • Dagan, T. & William, M. (2006). The tree of one percent. Genome Biol 7, 118.
    • (2006) Genome Biol , vol.7 , pp. 118
    • Dagan, T.1    William, M.2
  • 16
    • 2442449227 scopus 로고    scopus 로고
    • Genomic islands in pathogenic and environmental microorganisms
    • Dobrindt, U., Hochhut, B., Hentschel, U. & Hacker, J. (2004). Genomic islands in pathogenic and environmental microorganisms. Nat Rev Microbiol 2, 414-424.
    • (2004) Nat Rev Microbiol , vol.2 , pp. 414-424
    • Dobrindt, U.1    Hochhut, B.2    Hentschel, U.3    Hacker, J.4
  • 17
    • 0033603539 scopus 로고    scopus 로고
    • Phylogenetic classification and the universal tree
    • Doolittle, W. F. (1999). Phylogenetic classification and the universal tree. Science 284, 2124-2129.
    • (1999) Science , vol.284 , pp. 2124-2129
    • Doolittle, W.F.1
  • 18
    • 8744302107 scopus 로고    scopus 로고
    • Measurements of fitness and competition in commensal Escherichia coli and E coli O157: H7 strains
    • Durso, L M., Smith, D. & Hutkins, R. W. (2004). Measurements of fitness and competition in commensal Escherichia coli and E coli O157: H7 strains. Appl Environ Microbiol 70, 6466-6472.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 6466-6472
    • Durso, L.M.1    Smith, D.2    Hutkins, R.W.3
  • 19
    • 0000326250 scopus 로고
    • The ecological and physiological significance of the growth of heterotrophic microorganisms with mixtures of substrates
    • Egli, T. (1995). The ecological and physiological significance of the growth of heterotrophic microorganisms with mixtures of substrates. Adv Microb Ecol 14, 305-386.
    • (1995) Adv Microb Ecol , vol.14 , pp. 305-386
    • Egli, T.1
  • 20
    • 0029858612 scopus 로고    scopus 로고
    • Role of Escherichia coli rpoS and associated genes in defence against oxidative damage
    • Eisenstark, A., Calcutt, M. J., Becker-Hapak, M. & Ivanova, A. (1996). Role of Escherichia coli rpoS and associated genes in defence against oxidative damage. Free Radic Biol Med 21, 975-993.
    • (1996) Free Radic Biol Med , vol.21 , pp. 975-993
    • Eisenstark, A.1    Calcutt, M.J.2    Becker-Hapak, M.3    Ivanova, A.4
  • 21
    • 0035209724 scopus 로고    scopus 로고
    • Hungry bacteria - definition and properties of a nutritional state
    • Ferenci, T. (2001). Hungry bacteria - definition and properties of a nutritional state. Environ Microbiol 3, 605-611.
    • (2001) Environ Microbiol , vol.3 , pp. 605-611
    • Ferenci, T.1
  • 22
    • 0020700626 scopus 로고
    • Survival and implantation of Escherichia coli in the intestinal tract
    • Freter, R., Brickner, H., Fekete, J., Vickerman, M. M. & Carey, K. E. (1983a). Survival and implantation of Escherichia coli in the intestinal tract. Infect Immun 39, 686-703.
    • (1983) Infect Immun , vol.39 , pp. 686-703
    • Freter, R.1    Brickner, H.2    Fekete, J.3    Vickerman, M.M.4    Carey, K.E.5
  • 23
    • 0020680808 scopus 로고
    • Mechanisms that control bacterial populations in continuous-flow culture models of mouse large intestinal flora
    • Freter, R., Brickner, H., Botney, M., Cleven, D. & Aranki, A. (1983b). Mechanisms that control bacterial populations in continuous-flow culture models of mouse large intestinal flora. Infect Immun 39, 676-685.
    • (1983) Infect Immun , vol.39 , pp. 676-685
    • Freter, R.1    Brickner, H.2    Botney, M.3    Cleven, D.4    Aranki, A.5
  • 24
    • 0031666819 scopus 로고    scopus 로고
    • Temporal changes in the frequency of colicinogeny in Escherichia coli from house mice
    • Gordon, D. M., Riley, M. A. & Pinou, T. (1998). Temporal changes in the frequency of colicinogeny in Escherichia coli from house mice. Microbiology 144, 2233-2240.
    • (1998) Microbiology , vol.144 , pp. 2233-2240
    • Gordon, D.M.1    Riley, M.A.2    Pinou, T.3
  • 25
    • 0033758756 scopus 로고    scopus 로고
    • Pathogenicity islands and the evolution of microbes
    • Hacker, J. & Kaper, J. B. (2000). Pathogenicity islands and the evolution of microbes. Annu Rev Microbiol 54, 641-679.
    • (2000) Annu Rev Microbiol , vol.54 , pp. 641-679
    • Hacker, J.1    Kaper, J.B.2
  • 27
    • 34447506254 scopus 로고    scopus 로고
    • Hengge-Aronis, R. (1996) Regulation of gene expression during entry into stationary phase. in Escherichia coli and Salmonella: Cellular and Molecular Biology, pp. 1497-1512. Edited by F. C. Neidhardt and others. Washington, DC: ASM Press.
    • Hengge-Aronis, R. (1996) Regulation of gene expression during entry into stationary phase. in Escherichia coli and Salmonella: Cellular and Molecular Biology, pp. 1497-1512. Edited by F. C. Neidhardt and others. Washington, DC: ASM Press.
  • 29
    • 3142675034 scopus 로고    scopus 로고
    • Specific growth rate and not cell density controls the general stress response in Escherichia coli
    • Ihssen, J. & Egli, T. (2004). Specific growth rate and not cell density controls the general stress response in Escherichia coli. Microbiology 150, 1637-1648.
    • (2004) Microbiology , vol.150 , pp. 1637-1648
    • Ihssen, J.1    Egli, T.2
  • 30
    • 25144518340 scopus 로고    scopus 로고
    • Global physiological analysis of carbon-and energy-limited growing Escherichia coli confirms a high degree of catabolic flexibility and preparedness for mixed substrate utilization
    • Ihssen, J. & Egli, T. (2005). Global physiological analysis of carbon-and energy-limited growing Escherichia coli confirms a high degree of catabolic flexibility and preparedness for mixed substrate utilization. Environ Microbiol 7, 1568-1581.
    • (2005) Environ Microbiol , vol.7 , pp. 1568-1581
    • Ihssen, J.1    Egli, T.2
  • 31
    • 0033765113 scopus 로고    scopus 로고
    • Functional modulation of Escherichia coli RNA polymerase
    • Ishihama, A. (2000). Functional modulation of Escherichia coli RNA polymerase. Annu Rev Microbiol 54, 499-518.
    • (2000) Annu Rev Microbiol , vol.54 , pp. 499-518
    • Ishihama, A.1
  • 32
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto Encyclopedia of Genes and Genomes
    • Kanehisa, M. & Goto, S. (2000). KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res 28, 27-30.
    • (2000) Nucleic Acids Res , vol.28 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 34
    • 0037195198 scopus 로고    scopus 로고
    • Improved analytical methods for microarray-based genome-composition analysis
    • doi:10.1093/nar/gki108
    • Kim, C. C., Joyce, E. A., Chan, K. & Falkow, S. (2002). Improved analytical methods for microarray-based genome-composition analysis. Genome Biol 3. doi:10.1093/nar/gki108
    • (2002) Genome Biol , vol.3
    • Kim, C.C.1    Joyce, E.A.2    Chan, K.3    Falkow, S.4
  • 35
    • 4344633752 scopus 로고    scopus 로고
    • A regulatory trade-off as a source of strain variation in the species Escherichia coli
    • King, T., Ishihama, A., Kori, A. & Ferenci, T. (2004). A regulatory trade-off as a source of strain variation in the species Escherichia coli. J Bacteriol 186, 5614-5620.
    • (2004) J Bacteriol , vol.186 , pp. 5614-5620
    • King, T.1    Ishihama, A.2    Kori, A.3    Ferenci, T.4
  • 36
    • 23044437168 scopus 로고    scopus 로고
    • What tangled web: Barriers to rampant horizontal gene transfer
    • Kurland, C. G. (2005). What tangled web: Barriers to rampant horizontal gene transfer. Bioessays 27, 741-747.
    • (2005) Bioessays , vol.27 , pp. 741-747
    • Kurland, C.G.1
  • 37
    • 0034283229 scopus 로고    scopus 로고
    • Intraspecies variation in bacterial genornes: The need for a species genome concept
    • Lan, R. & Reeves, P. R. (2000). Intraspecies variation in bacterial genornes: The need for a species genome concept. Trends Microbiol 8, 396-401.
    • (2000) Trends Microbiol , vol.8 , pp. 396-401
    • Lan, R.1    Reeves, P.R.2
  • 38
    • 0028176450 scopus 로고
    • s subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stability
    • s subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stability. Genes Dev 8, 1600-1612.
    • (1994) Genes Dev , vol.8 , pp. 1600-1612
    • Lange, R.1    Hengge-Aronis, R.2
  • 39
    • 0035527403 scopus 로고    scopus 로고
    • Catalyzing bacterial speciation: Correlating lateral transfer with genetic headroom
    • Lawrence, J. G. (2001). Catalyzing bacterial speciation: correlating lateral transfer with genetic headroom. Syst Biol 50, 479-496.
    • (2001) Syst Biol , vol.50 , pp. 479-496
    • Lawrence, J.G.1
  • 40
    • 0032482924 scopus 로고    scopus 로고
    • Molecular archaeology of the Escherichia coli genome
    • Lawrence, J. G. & Ochman, H. (1998). Molecular archaeology of the Escherichia coli genome. Proc Natl Acad Sci U S A 95, 9413-9417.
    • (1998) Proc Natl Acad Sci U S A , vol.95 , pp. 9413-9417
    • Lawrence, J.G.1    Ochman, H.2
  • 41
    • 34447514004 scopus 로고    scopus 로고
    • Lin, E. C. C. (1996). Dissimilatory pathways for sugars, polyols and carboxylates. In Escherichia coli and Salmonella: Cellular and Molecular Biology, pp. 307-342. Edited by F. C. Neidhardt and others. Washington, DC: ASM Press.
    • Lin, E. C. C. (1996). Dissimilatory pathways for sugars, polyols and carboxylates. In Escherichia coli and Salmonella: Cellular and Molecular Biology, pp. 307-342. Edited by F. C. Neidhardt and others. Washington, DC: ASM Press.
  • 42
    • 18144396807 scopus 로고    scopus 로고
    • Global transcriptional programs reveal a carbon source foraging strategy by Escherichia coli
    • Liu, M., Durfee, T., Cabrera, J. E., Zhao, K, Jin, D. J. & Blattner, F. R. (2005). Global transcriptional programs reveal a carbon source foraging strategy by Escherichia coli. J Biol Chem 280, 15921-15927.
    • (2005) J Biol Chem , vol.280 , pp. 15921-15927
    • Liu, M.1    Durfee, T.2    Cabrera, J.E.3    Zhao, K.4    Jin, D.J.5    Blattner, F.R.6
  • 43
  • 44
    • 0030628034 scopus 로고    scopus 로고
    • Human colonic microbiota: Ecology, physiology and metabolic potential of intestinal bacteria
    • Macfarlane, G. T. & Macfarlane, S. (1997). Human colonic microbiota: Ecology, physiology and metabolic potential of intestinal bacteria. Scand J Gastroenterol Suppl 222, 3-9.
    • (1997) Scand J Gastroenterol Suppl , vol.222 , pp. 3-9
    • Macfarlane, G.T.1    Macfarlane, S.2
  • 45
    • 0031944894 scopus 로고    scopus 로고
    • Validation of a three-stage compound continuous culture system for investigating the effect of retention time on the ecology and metabolism of bacteria in the human colon
    • Macfarlane, G. T., Macfarlane, S. & Gibson, G. R. (1998). Validation of a three-stage compound continuous culture system for investigating the effect of retention time on the ecology and metabolism of bacteria in the human colon. Microb Ecol 35, 180-187.
    • (1998) Microb Ecol , vol.35 , pp. 180-187
    • Macfarlane, G.T.1    Macfarlane, S.2    Gibson, G.R.3
  • 46
    • 0032877609 scopus 로고    scopus 로고
    • Mutational adaptation of Escherichia coli to glucose limitation involves distinct evolutionary pathways in aerobic and oxygen-limited environments
    • Manché, K., Notley-McRobb, L. & Ferenci, T. (1999). Mutational adaptation of Escherichia coli to glucose limitation involves distinct evolutionary pathways in aerobic and oxygen-limited environments. Genetics 153, 5-12.
    • (1999) Genetics , vol.153 , pp. 5-12
    • Manché, K.1    Notley-McRobb, L.2    Ferenci, T.3
  • 47
    • 0019855847 scopus 로고
    • Escherichia coli and the human gut: Some ecological considerations
    • Mason, T. G. & Richardson, G. (1981). Escherichia coli and the human gut: Some ecological considerations. J Appl Bacteriol 51, 1-16.
    • (1981) J Appl Bacteriol , vol.51 , pp. 1-16
    • Mason, T.G.1    Richardson, G.2
  • 48
    • 0025978756 scopus 로고
    • The molecular basis of carbon-starvation-induced general resistance in Escherichia coli
    • Matin, A. (1991). The molecular basis of carbon-starvation-induced general resistance in Escherichia coli. Mol Microbiol 5, 3-10.
    • (1991) Mol Microbiol , vol.5 , pp. 3-10
    • Matin, A.1
  • 49
    • 34447548866 scopus 로고    scopus 로고
    • Starvation, bacterial
    • Edited by M. Schaechter. Amsterdam: Elsevier Academic Press
    • Matin, A. C. (2004). Starvation, bacterial. In Desk Encyclopedia of Microbiology, pp. 951-959. Edited by M. Schaechter. Amsterdam: Elsevier Academic Press.
    • (2004) Desk Encyclopedia of Microbiology , pp. 951-959
    • Matin, A.C.1
  • 50
    • 34447515490 scopus 로고    scopus 로고
    • McFall, E. & Newman, E. B. (1996). Amino acids as carbon sources. In Escherichia coli and Salmonella: Cellular and Molecular Biology, pp. 307-342. Edited by F. C. Neidhardt and others. Washington, DC: ASM Press.
    • McFall, E. & Newman, E. B. (1996). Amino acids as carbon sources. In Escherichia coli and Salmonella: Cellular and Molecular Biology, pp. 307-342. Edited by F. C. Neidhardt and others. Washington, DC: ASM Press.
  • 51
    • 0026522792 scopus 로고
    • Selection of laboratory wild-type phenotype from natural isolates of Escherichia coli in chemostats
    • Mikkola, R. & Kurland, C. G. (1992). Selection of laboratory wild-type phenotype from natural isolates of Escherichia coli in chemostats. Mol Biol Evol 9, 394-402.
    • (1992) Mol Biol Evol , vol.9 , pp. 394-402
    • Mikkola, R.1    Kurland, C.G.2
  • 52
    • 0022844234 scopus 로고
    • Biotyping confirms a nearly clonal population structure in Escherichia coli
    • Miller, R. D. & Hartl, D. L. (1986). Biotyping confirms a nearly clonal population structure in Escherichia coli. Evolution 40, 1-12.
    • (1986) Evolution , vol.40 , pp. 1-12
    • Miller, R.D.1    Hartl, D.L.2
  • 53
    • 0029078792 scopus 로고
    • Influence of the RpoS (KatF) sigma factor on maintenance of viability and culturability of Escherichia coli and Salmonella typhimurium in seawater
    • Munro, P. M., Flatau, G. N., Clement R. L. & Gauthier, M. J. (1995). Influence of the RpoS (KatF) sigma factor on maintenance of viability and culturability of Escherichia coli and Salmonella typhimurium in seawater. Appl Environ Microbiol 61, 1853-1858.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 1853-1858
    • Munro, P.M.1    Flatau, G.N.2    Clement, R.L.3    Gauthier, M.J.4
  • 54
    • 0033068938 scopus 로고    scopus 로고
    • Adaptive mgl-regulatory mutations and genetic diversity evolving in glucose-limited Escherichia coli populations
    • Notley-McRobb, L. & Ferenci, T. (1999a). Adaptive mgl-regulatory mutations and genetic diversity evolving in glucose-limited Escherichia coli populations. Environ Microbiol 1, 33-43.
    • (1999) Environ Microbiol , vol.1 , pp. 33-43
    • Notley-McRobb, L.1    Ferenci, T.2
  • 55
    • 0033068946 scopus 로고    scopus 로고
    • The generation of multiple coexisting mal-regulatory mutations through polygenic evolution in glucose-limited populations of Escherichia coli
    • Notley-McRobb, L. & Ferenci, T. (1999b). The generation of multiple coexisting mal-regulatory mutations through polygenic evolution in glucose-limited populations of Escherichia coli. Environ Microbiol 1, 45-52.
    • (1999) Environ Microbiol , vol.1 , pp. 45-52
    • Notley-McRobb, L.1    Ferenci, T.2
  • 56
    • 0036181664 scopus 로고    scopus 로고
    • rpoS mutations and loss of general stress resistance in Escherichia coli populations as a consequence of conflict between competing stress responses
    • Notley-McRobb, L., King, T. & Ferenci, T. (2002). rpoS mutations and loss of general stress resistance in Escherichia coli populations as a consequence of conflict between competing stress responses. J Bacteriol 184, 806-811.
    • (2002) J Bacteriol , vol.184 , pp. 806-811
    • Notley-McRobb, L.1    King, T.2    Ferenci, T.3
  • 57
    • 33646045061 scopus 로고    scopus 로고
    • Enhanced persistence in the colonic microbiota of Escherichia coli strains belonging to phylogenetic group B2: Role of virulence factors and adherence to colonic cells
    • Nowrouzian, F. L., Adlerberth, I. & Wold, A. (2006). Enhanced persistence in the colonic microbiota of Escherichia coli strains belonging to phylogenetic group B2: Role of virulence factors and adherence to colonic cells. Microbes Infect 8, 834-840.
    • (2006) Microbes Infect , vol.8 , pp. 834-840
    • Nowrouzian, F.L.1    Adlerberth, I.2    Wold, A.3
  • 58
    • 9244230099 scopus 로고    scopus 로고
    • Stationary-phase physiology
    • Nyström, T. (2004). Stationary-phase physiology. Annu Rev Microbiol 58, 161-181.
    • (2004) Annu Rev Microbiol , vol.58 , pp. 161-181
    • Nyström, T.1
  • 59
    • 0034682335 scopus 로고    scopus 로고
    • Lateral gene transfer and the nature of bacterial innovation
    • Ochman, H., Lawrence, J. G. & Groisman, E. A. (2000). Lateral gene transfer and the nature of bacterial innovation. Nature 405, 299-304.
    • (2000) Nature , vol.405 , pp. 299-304
    • Ochman, H.1    Lawrence, J.G.2    Groisman, E.A.3
  • 60
    • 0021161918 scopus 로고
    • Cloning and expression of the activity and immunity genes of colicins B and M on CoIBM plasmids
    • Öschäger, T., Schramm, E. & Braun, V. (1984). Cloning and expression of the activity and immunity genes of colicins B and M on CoIBM plasmids. Mol Gen Genet 199, 482-487.
    • (1984) Mol Gen Genet , vol.199 , pp. 482-487
    • Öschäger, T.1    Schramm, E.2    Braun, V.3
  • 61
    • 0032464663 scopus 로고    scopus 로고
    • What's for dinner?: Entner-Doudoroff metabolism in Escherichia coli
    • Peekhaus, N. & Conway, T. (1998). What's for dinner?: Entner-Doudoroff metabolism in Escherichia coli. J Bacteriol 180, 3495-3502.
    • (1998) J Bacteriol , vol.180 , pp. 3495-3502
    • Peekhaus, N.1    Conway, T.2
  • 63
    • 0242354974 scopus 로고    scopus 로고
    • Horizontal gene transfer and phylogenetics
    • Philippe, H. & Douady, C. J. (2003). Horizontal gene transfer and phylogenetics. Curr Opin Microbiol 6, 498-505.
    • (2003) Curr Opin Microbiol , vol.6 , pp. 498-505
    • Philippe, H.1    Douady, C.J.2
  • 64
    • 0027121374 scopus 로고
    • Variation in O-antigens, niche-specific selection and bacterial populations
    • Reeves, P. R. (1992). Variation in O-antigens, niche-specific selection and bacterial populations. FEMS Microbiol Lett 79, 509-516.
    • (1992) FEMS Microbiol Lett , vol.79 , pp. 509-516
    • Reeves, P.R.1
  • 65
    • 0020891851 scopus 로고
    • Escherichia coli habitats, cell types and molecular mechanisms of gene control
    • Savageau, M. A. (1983). Escherichia coli habitats, cell types and molecular mechanisms of gene control. Am Nat 122, 732-744.
    • (1983) Am Nat , vol.122 , pp. 732-744
    • Savageau, M.A.1
  • 66
    • 0023127806 scopus 로고
    • Universal chemical assay for the detection and determination of siderophores
    • Schwyn, B. & Neilands, J. B. (1987). Universal chemical assay for the detection and determination of siderophores. Anal Biochem 160, 47-56.
    • (1987) Anal Biochem , vol.160 , pp. 47-56
    • Schwyn, B.1    Neilands, J.B.2
  • 67
    • 34447521738 scopus 로고    scopus 로고
    • Selander, R. K, Caugant, D. A. & Whittam, T. S. (1996). Genetic structure and variation in natural populations of Escherichia coli. In Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology, pp. 1625-1648. Edited by F. C. Neidhardt and others. Washington, DC: ASM Press.
    • Selander, R. K, Caugant, D. A. & Whittam, T. S. (1996). Genetic structure and variation in natural populations of Escherichia coli. In Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology, pp. 1625-1648. Edited by F. C. Neidhardt and others. Washington, DC: ASM Press.
  • 68
    • 0028116314 scopus 로고
    • The growth of Escherichia coli in glucose-limited chemostat cultures: A re-examination of the kinetics
    • Senn, H., Lendenmann, U., Snozzi, M., Hamer, G. & Egli, T. (1994). The growth of Escherichia coli in glucose-limited chemostat cultures: A re-examination of the kinetics. Biochim Biophys Acta 1201, 424-436.
    • (1994) Biochim Biophys Acta , vol.1201 , pp. 424-436
    • Senn, H.1    Lendenmann, U.2    Snozzi, M.3    Hamer, G.4    Egli, T.5
  • 69
    • 0015093174 scopus 로고
    • Effect of nutrient concentration on the growth of Escherichia coli
    • Shehata, T. E & Marr, A. G. (1971). Effect of nutrient concentration on the growth of Escherichia coli. J Bacteriol 107, 210-216.
    • (1971) J Bacteriol , vol.107 , pp. 210-216
    • Shehata, T.E.1    Marr, A.G.2
  • 70
    • 0018091651 scopus 로고
    • The effect of plasmid-determined and other characteristics on the survival of Escherichia coli in the alimentary tract of two human beings
    • Smith, H. W. & Huggins, M. B. (1978). The effect of plasmid-determined and other characteristics on the survival of Escherichia coli in the alimentary tract of two human beings. J Gen Microbiol 109, 375-379.
    • (1978) J Gen Microbiol , vol.109 , pp. 375-379
    • Smith, H.W.1    Huggins, M.B.2
  • 71
    • 0016608970 scopus 로고
    • Transmissible substrate-utilizing ability in enterobacteria
    • Smith, H. W. & Parsell, Z. (1975). Transmissible substrate-utilizing ability in enterobacteria. J Gen Microbiol 87, 129-140.
    • (1975) J Gen Microbiol , vol.87 , pp. 129-140
    • Smith, H.W.1    Parsell, Z.2
  • 73
    • 14544280790 scopus 로고    scopus 로고
    • Lack of evidence for horizontal transfer of the lac operon into Escherichia coli
    • Stoebel, D. M. (2004). Lack of evidence for horizontal transfer of the lac operon into Escherichia coli. Mol Biol Evol 22, 683-690.
    • (2004) Mol Biol Evol , vol.22 , pp. 683-690
    • Stoebel, D.M.1
  • 74
    • 0030840083 scopus 로고    scopus 로고
    • RpoS- and OxyR-independent induction of HPI catalase at stationary phase in Escherichia coli and identification of rpoS mutations in common laboratory strains
    • Visick, J. E. & Clarke, S. (1997). RpoS- and OxyR-independent induction of HPI catalase at stationary phase in Escherichia coli and identification of rpoS mutations in common laboratory strains. J Bacteriol 179, 4158-4163.
    • (1997) J Bacteriol , vol.179 , pp. 4158-4163
    • Visick, J.E.1    Clarke, S.2
  • 75
    • 0029972010 scopus 로고    scopus 로고
    • Characterization of the acid resistance phenotype and rpoS alleles of shiga-like toxin-producing Escherichia coli
    • Waterman, S. R. & Small, P. L. (1996). Characterization of the acid resistance phenotype and rpoS alleles of shiga-like toxin-producing Escherichia coli. Infect Immun 64, 2808-2811.
    • (1996) Infect Immun , vol.64 , pp. 2808-2811
    • Waterman, S.R.1    Small, P.L.2
  • 77
    • 3142678124 scopus 로고    scopus 로고
    • Molecular components of physiological stress responses in Escherichia coli
    • Wick L M. & Egli, T. (2004). Molecular components of physiological stress responses in Escherichia coli. Adv Biochem Eng Biotechnol 89, 1-45.
    • (2004) Adv Biochem Eng Biotechnol , vol.89 , pp. 1-45
    • Wick, L.M.1    Egli, T.2
  • 78
    • 0035213758 scopus 로고    scopus 로고
    • Short- and long-term changes in proteome composition and kinetic properties in a culture of Escherichia coli during transition from glucose-excess to glucose-limited growth conditions in continuous culture and vice versa
    • Wick L. M., Quadroni, M. & Egli, T. (2001). Short- and long-term changes in proteome composition and kinetic properties in a culture of Escherichia coli during transition from glucose-excess to glucose-limited growth conditions in continuous culture and vice versa. Environ Microbiol 3, 588-599.
    • (2001) Environ Microbiol , vol.3 , pp. 588-599
    • Wick, L.M.1    Quadroni, M.2    Egli, T.3
  • 79
    • 0036736638 scopus 로고    scopus 로고
    • The apparent dock-like evolution of Escherichia coli in glucose-limited chemostats is reproducible at large but not at small population sizes and can be explained with Monod kinetics
    • Wick L. M., Weilenmann, H. & Egli, T. (2002). The apparent dock-like evolution of Escherichia coli in glucose-limited chemostats is reproducible at large but not at small population sizes and can be explained with Monod kinetics. Microbiology 148, 2889-2902.
    • (2002) Microbiology , vol.148 , pp. 2889-2902
    • Wick, L.M.1    Weilenmann, H.2    Egli, T.3
  • 80
    • 14244251962 scopus 로고    scopus 로고
    • Evolution of genomic content in the stepwise emergence of Escherichia coli O157: H7
    • Wick, L. M., Qi. W., Lacher, D. W. & Whittam, T. S. (2005). Evolution of genomic content in the stepwise emergence of Escherichia coli O157: H7. J Bacteriol 187, 1783-1791.
    • (2005) J Bacteriol , vol.187 , pp. 1783-1791
    • Wick, L.M.1    Qi, W.2    Lacher, D.W.3    Whittam, T.S.4
  • 81
    • 0032859398 scopus 로고    scopus 로고
    • Mutations enhancing amino acid catabolism confer a growth advantage in stationary phase
    • Zinser, E. R. & Kolter, R. (1999). Mutations enhancing amino acid catabolism confer a growth advantage in stationary phase. J Bacteriol 181, 5800-5807.
    • (1999) J Bacteriol , vol.181 , pp. 5800-5807
    • Zinser, E.R.1    Kolter, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.