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Volumn 22, Issue 3, 2005, Pages 683-690

Lack of evidence for horizontal transfer of the lac operon into Escherichia coli

Author keywords

Adaptation; Escherichia coli; lac operon; Lateral gene transfer; Shimodaira Hasegawa test

Indexed keywords

LACTOSE;

EID: 14544280790     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/molbev/msi056     Document Type: Article
Times cited : (17)

References (33)
  • 1
    • 0017151539 scopus 로고
    • Thiogalactoside transacetylase of the lactose operon as an enzyme for detoxification
    • Andrews, K. J., and E. C. Lin. 1976. Thiogalactoside transacetylase of the lactose operon as an enzyme for detoxification. J. Bacteriol. 128:510-513.
    • (1976) J. Bacteriol. , vol.128 , pp. 510-513
    • Andrews, K.J.1    Lin, E.C.2
  • 3
    • 0020394909 scopus 로고
    • Synthesis of (2R)-glycerol-o-beta-D-galactopyranoside by beta-galactosidase
    • Boos, W. 1982. Synthesis of (2R)-glycerol-o-beta-D-galactopyranoside by beta-galactosidase. Methods Enzymol. 89(Pt D): 59-64.
    • (1982) Methods Enzymol. , vol.89 , Issue.PART D , pp. 59-64
    • Boos, W.1
  • 6
    • 0019968943 scopus 로고
    • Escherichia vulneris: A new species of Enterobacteriaceae associated with human wounds
    • Brenner, D. J., A. C. McWhorter, J. K. Knutson, and A. G. Steigerwalt. 1982b. Escherichia vulneris: a new species of Enterobacteriaceae associated with human wounds. J. Clin. Microbiol. 15:1133-1140.
    • (1982) J. Clin. Microbiol. , vol.15 , pp. 1133-1140
    • Brenner, D.J.1    McWhorter, A.C.2    Knutson, J.K.3    Steigerwalt, A.G.4
  • 7
    • 0035109360 scopus 로고    scopus 로고
    • Evolutionary adaptation to temperature. VIII. Effects of temperature on growth rate in natural isolates of Escherichia coli and Salmonella enterica from different thermal environments
    • Bronikowski, A. M., A. F. Bennett, and R. E. Lenski. 2001. Evolutionary Adaptation to temperature. VIII. Effects of temperature on growth rate in natural isolates of Escherichia coli and Salmonella enterica from different thermal environments. Evolution 55:33-40.
    • (2001) Evolution , vol.55 , pp. 33-40
    • Bronikowski, A.M.1    Bennett, A.F.2    Lenski, R.E.3
  • 8
    • 0021165714 scopus 로고
    • Location and analysis of nucleotide sequences at one end of a putative lac transposon in the Escherichia coli chromosome
    • Buvinger, W. E., K. A. Lampel, R. J. Bojanowski, and M. Riley. 1984. Location and analysis of nucleotide sequences at one end of a putative lac transposon in the Escherichia coli chromosome. J. Bacteriol. 159:618-623.
    • (1984) J. Bacteriol. , vol.159 , pp. 618-623
    • Buvinger, W.E.1    Lampel, K.A.2    Bojanowski, R.J.3    Riley, M.4
  • 9
    • 0042027842 scopus 로고    scopus 로고
    • Phylogenetics and the cohesion of bacterial genomes
    • Daubin, V., N. A. Moran, and H. Ochman. 2003. Phylogenetics and the cohesion of bacterial genomes. Science 301:829-832.
    • (2003) Science , vol.301 , pp. 829-832
    • Daubin, V.1    Moran, N.A.2    Ochman, H.3
  • 11
    • 0018428819 scopus 로고
    • The lac-operon for lactose degradation, or rather for the utilization of galactosylglycerols from galactolipids?
    • Egel, R. 1979. The lac-operon for lactose degradation, or rather for the utilization of galactosylglycerols from galactolipids? J. Theor. Biol. 79:117-119.
    • (1979) J. Theor. Biol. , vol.79 , pp. 117-119
    • Egel, R.1
  • 12
    • 0031976258 scopus 로고    scopus 로고
    • Phylogenomics: Improving functional predictions for uncharacterized genes by evolutionary analysis
    • Eisen, J. A. 1998. Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis. Genome Res. 8:163-167.
    • (1998) Genome Res. , vol.8 , pp. 163-167
    • Eisen, J.A.1
  • 13
    • 0042386134 scopus 로고    scopus 로고
    • The evolutionary history of Shigella and enteroinvasive Escherichia coli revised
    • Escobar-Paramo, P., C. Giudicelli, C. Parsot, and E. Denamur. 2003. The evolutionary history of Shigella and enteroinvasive Escherichia coli revised. J. Mol. Evol. 57:140-148.
    • (2003) J. Mol. Evol. , vol.57 , pp. 140-148
    • Escobar-Paramo, P.1    Giudicelli, C.2    Parsot, C.3    Denamur, E.4
  • 14
    • 0000430962 scopus 로고
    • The Genus Klebsiella
    • A. Balows, H. G. Truper, M. Dworkin, W. Harder, and K.-H. Schleifer, eds. Springer-Verlag, New York
    • Grimont, F., P. A. D. Grimont, and C. Richard. 1992. The Genus Klebsiella. Pp. 2775-2796 in A. Balows, H. G. Truper, M. Dworkin, W. Harder, and K.-H. Schleifer, eds. The prokaryotes. Springer-Verlag, New York.
    • (1992) The Prokaryotes , pp. 2775-2796
    • Grimont, F.1    Grimont, P.A.D.2    Richard, C.3
  • 15
    • 0034882455 scopus 로고    scopus 로고
    • Intragenomic base content variation is a potential source of biases when searching for horizontally transferred genes
    • Guindon, S., and G. Perriere. 2001. Intragenomic base content variation is a potential source of biases when searching for horizontally transferred genes. Mol. Biol. Evol. 18:1838-1840.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 1838-1840
    • Guindon, S.1    Perriere, G.2
  • 17
    • 0025953959 scopus 로고
    • Possible mechanisms underlying the slow lactose fermentation phenotype in Shigella spp.
    • Ito, H., N. Kido, Y. Arakawa, M. Ohta, T. Sugiyama, and N. Kato. 1991. Possible mechanisms underlying the slow lactose fermentation phenotype in Shigella spp. Appl: Environ. Microbiol. 57:2912-2917.
    • (1991) Appl: Environ. Microbiol. , vol.57 , pp. 2912-2917
    • Ito, H.1    Kido, N.2    Arakawa, Y.3    Ohta, M.4    Sugiyama, T.5    Kato, N.6
  • 18
    • 0034992826 scopus 로고    scopus 로고
    • The closest BLAST hit is often not the nearest neighbor
    • Koski, L. B., and G. B. Golding. 2001. The closest BLAST hit is often not the nearest neighbor. J. Mol. Evol. 52:540-542.
    • (2001) J. Mol. Evol. , vol.52 , pp. 540-542
    • Koski, L.B.1    Golding, G.B.2
  • 19
    • 0035099964 scopus 로고    scopus 로고
    • Codon bias and base composition are poor indicators of horizontally transferred genes
    • Koski, L. B., R. A. Morton, and G. B. Golding. 2001. Codon bias and base composition are poor indicators of horizontally transferred genes. Mol. Biol. Evol. 18:404-412.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 404-412
    • Koski, L.B.1    Morton, R.A.2    Golding, G.B.3
  • 20
    • 0035527403 scopus 로고    scopus 로고
    • Catalyzing bacterial speciation: Correlating lateral transfer with genetic headroom
    • Lawrence, J. G. 2001. Catalyzing bacterial speciation: correlating lateral transfer with genetic headroom. Syst. Biol. 50:479-496.
    • (2001) Syst. Biol. , vol.50 , pp. 479-496
    • Lawrence, J.G.1
  • 21
    • 0032482924 scopus 로고    scopus 로고
    • Molecular archaeology of the Escherichia coli genome
    • Lawrence, J. G., and H. Ochman. 1998. Molecular archaeology of the Escherichia coli genome. Proc. Natl. Acad. Sci. USA 95:9413-9417.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 9413-9417
    • Lawrence, J.G.1    Ochman, H.2
  • 22
    • 0025777130 scopus 로고
    • Molecular and evolutionary relationships among enteric bacteria
    • Lawrence, J. G., H. Ochman, and D. L. Hartl. 1991. Molecular and evolutionary relationships among enteric bacteria. J. Gen. Microbiol. 137:1911-1921.
    • (1991) J. Gen. Microbiol. , vol.137 , pp. 1911-1921
    • Lawrence, J.G.1    Ochman, H.2    Hartl, D.L.3
  • 23
    • 0029847554 scopus 로고    scopus 로고
    • Selfish operons: Horizontal transfer may drive the evolution of gene clusters
    • Lawrence, J. G., and J. R. Roth. 1996. Selfish operons: horizontal transfer may drive the evolution of gene clusters. Genetics 143:1843-1860.
    • (1996) Genetics , vol.143 , pp. 1843-1860
    • Lawrence, J.G.1    Roth, J.R.2
  • 24
    • 1342271382 scopus 로고    scopus 로고
    • From gene trees to organismal phylogeny in prokaryotes: The case of the gamma-proteobacteria
    • Lerat, E., V. Daubin, and N. A. Moran. 2003. From gene trees to organismal phylogeny in prokaryotes: The case of the gamma-proteobacteria. PLoS Biol. 1:E19.
    • (2003) PLoS Biol. , vol.1
    • Lerat, E.1    Daubin, V.2    Moran, N.A.3
  • 25
    • 0004237567 scopus 로고
    • Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
    • Miller, J. H., and W. S. Reznikoff. 1978. The operon. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
    • (1978) The Operon
    • Miller, J.H.1    Reznikoff, W.S.2
  • 26
    • 0034682335 scopus 로고    scopus 로고
    • Lateral gene transfer and the nature of bacterial innovation
    • Ochman, H., J. G. Lawrence, and E. A. Groisman. 2000. Lateral gene transfer and the nature of bacterial innovation. Nature 405:299-304.
    • (2000) Nature , vol.405 , pp. 299-304
    • Ochman, H.1    Lawrence, J.G.2    Groisman, E.A.3
  • 27
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • Posada, D., and K. A. Crandall. 1998. MODELTEST: Testing the model of DNA substitution. Bioinformatics 14:817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 28
    • 0034641731 scopus 로고    scopus 로고
    • Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics
    • Pupo, G. M., R. Lan, and P. R. Reeves. 2000. Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics. Proc. Natl. Acad. Sci. USA 97:10567-10572.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 10567-10572
    • Pupo, G.M.1    Lan, R.2    Reeves, P.R.3
  • 29
    • 0019313422 scopus 로고
    • Conservation and variation of nucleotide sequences within related bacterial genomes: Enterobacteria
    • Riley, M., and A. Anilionis. 1980. Conservation and variation of nucleotide sequences within related bacterial genomes: Enterobacteria. J. Bacteriol. 143:366-376.
    • (1980) J. Bacteriol. , vol.143 , pp. 366-376
    • Riley, M.1    Anilionis, A.2
  • 30
    • 0032766857 scopus 로고    scopus 로고
    • Multiple comparisons of log-likelihoods with applications to phylogenetic inference
    • Shimodaira, H., and M. Hasegawa. 1999. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol. Biol. Evol. 16:1114-1116.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 1114-1116
    • Shimodaira, H.1    Hasegawa, M.2
  • 31
    • 0017721289 scopus 로고
    • DNA rearrangements in procaryotes
    • Starlinger, P. 1977. DNA rearrangements in procaryotes. Annu. Rev. Genet. 11:103-126.
    • (1977) Annu. Rev. Genet. , vol.11 , pp. 103-126
    • Starlinger, P.1
  • 33
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin, and D. G. Higgins. 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25:4876-4882.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.