-
1
-
-
0036086784
-
Evaluation of computational metabolic-pathway predictions for Helicobacter pylori
-
Paley,S.M. and Karp,P.D. (2002) Evaluation of computational metabolic-pathway predictions for Helicobacter pylori. Bioinformatics 18, 715-724.
-
(2002)
Bioinformatics
, vol.18
, pp. 715-724
-
-
Paley, S.M.1
Karp, P.D.2
-
2
-
-
0346494819
-
MetaCyc: A multiorganism database of metabolic pathways and enzymes
-
Krieger,C.J., Zhang,P., Mueller,L.A., Wang,A., Paley,S., Arnaud,M., Pick,J., Rhee,S.Y. and Karp,P.D. (2004) MetaCyc: a multiorganism database of metabolic pathways and enzymes. Nucleic Acids Res., 32, D438-D442.
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Krieger, C.J.1
Zhang, P.2
Mueller, L.A.3
Wang, A.4
Paley, S.5
Arnaud, M.6
Pick, J.7
Rhee, S.Y.8
Karp, P.D.9
-
3
-
-
6944256505
-
The E. coli EcoCyc database: No longer just a metabolic pathway database
-
Karp,P.D., Arnaud,M., Collado-Vides,J., Ingraham,J., Paulsen,I.T. and Saier,M.H.,Jr (2004) The E. coli EcoCyc database: no longer just a metabolic pathway database. ASM News, 70, 25-30.
-
(2004)
ASM News
, vol.70
, pp. 25-30
-
-
Karp, P.D.1
Arnaud, M.2
Collado-Vides, J.3
Ingraham, J.4
Paulsen, I.T.5
Saier Jr., M.H.6
-
4
-
-
2442690703
-
An evidence ontology for use in pathway/genome databases Pacific
-
Altman,R.B., Dunker,A.K., Hunter,L., Jung,T. and Klein,T.E. (eds), World Scientific Press, Singapore
-
Karp,P.D., Paley,S., Krieger,C.J. and Zhang,P. (2004) An evidence ontology for use in pathway/genome databases. In Altman,R.B., Dunker,A.K., Hunter,L., Jung,T. and Klein,T.E. (eds), Pacific Symposium on Biocomputing 2004. World Scientific Press, Singapore, pp. 190-201.
-
(2004)
Symposium on Biocomputing 2004
, pp. 190-201
-
-
Karp, P.D.1
Paley, S.2
Krieger, C.J.3
Zhang, P.4
-
5
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner,F.R., Plunkett,G.,III, Bloch,C.A., Perna,N.T., Burland,V., Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F. et al. (1997) The complete genome sequence of Escherichia coli K-12. Science, 277, 1453-1462.
-
(1997)
Science
, vol.277
, pp. 1453-1462
-
-
Blattner, F.R.1
Plunkett II, G.2
Bloch, C.A.3
Perna, N.T.4
Burland, V.5
Riley, M.6
Collado-Vides, J.7
Glasner, J.D.8
Rode, C.K.9
Mayhew, G.F.10
-
6
-
-
0036084127
-
The EcoCyc database
-
Karp,P.D., Riley,M., Saier,M., Paulsen,I.T., Collado-Vides,J., Paley,S., Pellegrini-Toole,A., Bonavides,C. and Gama-Castro,S. (2002) The EcoCyc database. Nucleic Acids Res., 30, 56-58.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 56-58
-
-
Karp, P.D.1
Riley, M.2
Saier, M.3
Paulsen, I.T.4
Collado-Vides, J.5
Paley, S.6
Pellegrini-Toole, A.7
Bonavides, C.8
Gama-Castro, S.9
-
7
-
-
9144270496
-
RegulonDB (version 4.0): Transcriptional regulation, operon organization and growth conditions in Escherichia coli K-12
-
Salgado,H., Gama-Castro,S., Martinez-Antonio,A., Diaz-Peredo,E., Sanchez-Solano,F., Peralta-Gil,M., Garcia-Alonso,D., Jimenez-Jacinto,V., Santos-Zavaleta,A., Bonavides-Martinez,C. and Collado-Vides,J. (2004) RegulonDB (version 4.0): transcriptional regulation, operon organization and growth conditions in Escherichia coli K-12. Nucleic Acids Res., 32, D303-D306.
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Salgado, H.1
Gama-Castro, S.2
Martinez-Antonio, A.3
Diaz-Peredo, E.4
Sanchez-Solano, F.5
Peralta-Gil, M.6
Garcia-Alonso, D.7
Jimenez-Jacinto, V.8
Santos-Zavaleta, A.9
Bonavides-Martinez, C.10
Collado-Vides, J.11
-
8
-
-
1842559849
-
Using functional and organizational information to improve genome-wide computational prediction of transcription units on pathway-genome databases
-
Romero,P.R. and Karp,P.D. (2004) Using functional and organizational information to improve genome-wide computational prediction of transcription units on pathway-genome databases. Bioinformatics, 20, 709-717.
-
(2004)
Bioinformatics
, vol.20
, pp. 709-717
-
-
Romero, P.R.1
Karp, P.D.2
-
9
-
-
13244268322
-
A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases
-
Green,M.L. and Karp,P.D. (2004) A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases. BMC Bioinformatics, 5, 76.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 76
-
-
Green, M.L.1
Karp, P.D.2
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