-
1
-
-
0037423247
-
A War on Obesity, Not the Obese
-
Friedman JM: A War on Obesity, Not the Obese. Science 2003, 299:856-858.
-
(2003)
Science
, vol.299
, pp. 856-858
-
-
Friedman, J.M.1
-
3
-
-
20544471519
-
The Human Obesity Gene Map: The 2004 Update
-
Perusse L, Rankinen T, Zuberi A, Chagnon YC, Weisnagel SJ, Argyropoulos G, Walts B, Snyder EE, Bouchard C: The Human Obesity Gene Map: The 2004 Update. Obesity Research 2005, 13(3):381-490.
-
(2005)
Obesity Research
, vol.13
, Issue.3
, pp. 381-490
-
-
Perusse, L.1
Rankinen, T.2
Zuberi, A.3
Chagnon, Y.C.4
Weisnagel, S.J.5
Argyropoulos, G.6
Walts, B.7
Snyder, E.E.8
Bouchard, C.9
-
4
-
-
13144306071
-
Genome-Wide Association Studies for Common Diseases and Complex Traits
-
Hirschhorn JN, Daly MJ: Genome-Wide Association Studies for Common Diseases and Complex Traits. Nature Reviews Genetics 2005, 6:95-108.
-
(2005)
Nature Reviews Genetics
, vol.6
, pp. 95-108
-
-
Hirschhorn, J.N.1
Daly, M.J.2
-
5
-
-
0024508964
-
Mapping Mendelian Factors Underlying Quantitative Traits Using RFLP Linkage Maps
-
Lander ES, Botstein D: Mapping Mendelian Factors Underlying Quantitative Traits Using RFLP Linkage Maps. Genetics 1989, 121:185-199.
-
(1989)
Genetics
, vol.121
, pp. 185-199
-
-
Lander, E.S.1
Botstein, D.2
-
6
-
-
0024229140
-
Diet-induced Type II Diabetes in C57BL/6J Mice
-
Surwit R, Kuhn C, Cochrane C, McCubbin J, Feinglos M: Diet-induced Type II Diabetes in C57BL/6J Mice. Diabetes 1988, 37(9):1163-1167.
-
(1988)
Diabetes
, vol.37
, Issue.9
, pp. 1163-1167
-
-
Surwit, R.1
Kuhn, C.2
Cochrane, C.3
McCubbin, J.4
Feinglos, M.5
-
7
-
-
0031782573
-
Reversal of Diet-induced Obesity and Diabetes in C57BL/6J Mice
-
Parekh P, Petro A, Tiller J, Feinglos M, Surwit R: Reversal of Diet-induced Obesity and Diabetes in C57BL/6J Mice. Metabolism 1998, 47(9):1089-1096.
-
(1998)
Metabolism
, vol.47
, Issue.9
, pp. 1089-1096
-
-
Parekh, P.1
Petro, A.2
Tiller, J.3
Feinglos, M.4
Surwit, R.5
-
8
-
-
4544253222
-
Short-term Resistance to Diet-Induced Obesity in A/J Mice is Not Associated with Regulation of Hypothalamic Neuropeptides
-
in press
-
Bullen JW Jr, Ziotopoulou M, Ungsunan L, Misra J, Alevizos I, Kokkotou E, Maratos-Flier E, Stephanopoulos G, Mantzoros CS: Short-term Resistance to Diet-Induced Obesity in A/J Mice is Not Associated with Regulation of Hypothalamic Neuropeptides. American Journal of Physiology: Endocrinology and Metabolism 2004 in press.
-
(2004)
American Journal of Physiology: Endocrinology and Metabolism
-
-
Bullen Jr., J.W.1
Ziotopoulou, M.2
Ungsunan, L.3
Misra, J.4
Alevizos, I.5
Kokkotou, E.6
Maratos-Flier, E.7
Stephanopoulos, G.8
Mantzoros, C.S.9
-
9
-
-
33751187736
-
-
PhD dissertation Massachusetts Institute of Technology, Department of Chemical Engineering
-
Raab RM: Genomic Analysis of Hepatic Insulin Resistance. In PhD dissertation Massachusetts Institute of Technology, Department of Chemical Engineering; 2005.
-
(2005)
Genomic Analysis of Hepatic Insulin Resistance
-
-
Raab, R.M.1
-
10
-
-
0036549767
-
Discordant Protein and mRNA Expression in Lung Adenocarcinomas
-
Chen G, Gharib T, Huang C, Taylor J, Misek D, Kardia S, Giordano T, Iannettoni M, Orringer M, Hanash S, Beer D: Discordant Protein and mRNA Expression in Lung Adenocarcinomas. Molecular & Cellular Proteomics 2002, 1:304-313.
-
(2002)
Molecular & Cellular Proteomics
, vol.1
, pp. 304-313
-
-
Chen, G.1
Gharib, T.2
Huang, C.3
Taylor, J.4
Misek, D.5
Kardia, S.6
Giordano, T.7
Iannettoni, M.8
Orringer, M.9
Hanash, S.10
Beer, D.11
-
11
-
-
0033016717
-
Correlation between Protein and mRNA in Yeast
-
Gygi S, Rochon Y, Franza B, Aebersold R: Correlation Between Protein and mRNA in Yeast. Molecular and Cellular Biology 1999, 19(3):1720-1730.
-
(1999)
Molecular and Cellular Biology
, vol.19
, Issue.3
, pp. 1720-1730
-
-
Gygi, S.1
Rochon, Y.2
Franza, B.3
Aebersold, R.4
-
12
-
-
0028806048
-
Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray
-
Schena M, Shalon D, Davis RW, Brown PO: Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray. Science 1995, 270:467-470.
-
(1995)
Science
, vol.270
, pp. 467-470
-
-
Schena, M.1
Shalon, D.2
Davis, R.W.3
Brown, P.O.4
-
13
-
-
10544256600
-
Expression Monitoring by Hybridization to High-Density Oligonucleotide Arrays
-
Lockhart D, Dong H, Byrne M, Follettie M, Gallo M, Chee M, Mittman M, Wang C, Kobayashi M, Horton H, Brown E: Expression Monitoring by Hybridization to High-Density Oligonucleotide Arrays. Nature Biotechnology 1996, 14(13):1675-1680.
-
(1996)
Nature Biotechnology
, vol.14
, Issue.13
, pp. 1675-1680
-
-
Lockhart, D.1
Dong, H.2
Byrne, M.3
Follettie, M.4
Gallo, M.5
Chee, M.6
Mittman, M.7
Wang, C.8
Kobayashi, M.9
Horton, H.10
Brown, E.11
-
14
-
-
33751164704
-
-
Web-site A URL
-
Web-site A URL 2005 [http://www.affymetrix.com/products/arrays/specific/ hgu133.affx].
-
(2005)
-
-
-
15
-
-
0036211063
-
Analysis of Matched mRNA Measurements from Two Different Microarray Technologies
-
Kuo W, Jenssen T, Butte A, Ohno-Machado L, Kohane I: Analysis of Matched mRNA Measurements From Two Different Microarray Technologies. Bioinformatics 2002, 18(3):405-412.
-
(2002)
Bioinformatics
, vol.18
, Issue.3
, pp. 405-412
-
-
Kuo, W.1
Jenssen, T.2
Butte, A.3
Ohno-Machado, L.4
Kohane, I.5
-
16
-
-
0033818954
-
A Concise Guide to cDNA Microarray Analysis
-
Hegde P, Qi R, Abernathy K, Gay C, Dharap S, Gaspard R, Earle-Hughes J, Snesrud E, Lee N, Quackenbush J: A Concise Guide to cDNA Microarray Analysis. Biotechniques 2000, 29(3):548-563.
-
(2000)
Biotechniques
, vol.29
, Issue.3
, pp. 548-563
-
-
Hegde, P.1
Qi, R.2
Abernathy, K.3
Gay, C.4
Dharap, S.5
Gaspard, R.6
Earle-Hughes, J.7
Snesrud, E.8
Lee, N.9
Quackenbush, J.10
-
17
-
-
0029812283
-
A DNA Microarray System for Analyzing Complex DNA Samples using Two-Color Fluorescent Probe Hybridization
-
Shalon D, Smith S, Brown P: A DNA Microarray System for Analyzing Complex DNA Samples using Two-Color Fluorescent Probe Hybridization. Genome Research 1996, 6:639-645.
-
(1996)
Genome Research
, vol.6
, pp. 639-645
-
-
Shalon, D.1
Smith, S.2
Brown, P.3
-
19
-
-
0032402904
-
Technology for Microarray Analysis of Gene Expression
-
Watson A, Mazumder A, Stewart M, Balasubramanian S: Technology for Microarray Analysis of Gene Expression. Current Opinion in Biotechnology 1998, 9:609-614.
-
(1998)
Current Opinion in Biotechnology
, vol.9
, pp. 609-614
-
-
Watson, A.1
Mazumder, A.2
Stewart, M.3
Balasubramanian, S.4
-
22
-
-
33751192346
-
-
The Institute for Genomic Research [http://www.tigr.org/tdb/microarray/]
-
-
-
-
23
-
-
33751172020
-
-
Patrick Brown's laboratory at
-
Patrick Brown's laboratory at Stanford University [http://cmgm.stanford. edu/pbrown/mguide/index.html]
-
-
-
-
24
-
-
33751165338
-
-
The Whitehead Institute for Microarray Technology [http://www.wi.mit.edu/ CMT/Microarrayhome.html]
-
-
-
-
25
-
-
0036574916
-
Statistical Issues with Microarrays: Processing and Analysis
-
Nadon R, Shoemaker J: Statistical Issues with Microarrays: Processing and Analysis. TRENDS in Genetics 2002, 18(5):265-271.
-
(2002)
Trends in Genetics
, vol.18
, Issue.5
, pp. 265-271
-
-
Nadon, R.1
Shoemaker, J.2
-
26
-
-
0035875553
-
Issues in cDNA Microarray Analysis: Quality Filtering, Channel Normailzation, Models of Variations and Assessment of Gene Effects
-
Tseng G, Oh M, Rohlin L, Liao J, Wong W: Issues in cDNA Microarray Analysis: Quality Filtering, Channel Normailzation, Models of Variations and Assessment of Gene Effects. Nucleic Acids Research 2001, 29(12):2549-2557.
-
(2001)
Nucleic Acids Research
, vol.29
, Issue.12
, pp. 2549-2557
-
-
Tseng, G.1
Oh, M.2
Rohlin, L.3
Liao, J.4
Wong, W.5
-
27
-
-
0038217829
-
Vector Algebra in the Analysis of Genome-wide Expression Data
-
Kuruvilla EG, Park PJ, Schreiber SL: Vector Algebra in the Analysis of Genome-wide Expression Data. Genome Biology 2002, 3(3):0011.1-0011.11.
-
(2002)
Genome Biology
, vol.3
, Issue.3
-
-
Kuruvilla, E.G.1
Park, P.J.2
Schreiber, S.L.3
-
28
-
-
0035375137
-
Computational Analysis of Microarray Data
-
Quackenbush J: Computational Analysis of Microarray Data. Nature Reviews Genetics 2001, 2(6):418-427.
-
(2001)
Nature Reviews Genetics
, vol.2
, Issue.6
, pp. 418-427
-
-
Quackenbush, J.1
-
29
-
-
0036953264
-
Calculation of the Minimum Number of Replicate Spots Required for Detection of Significant Gene Expression Fold Change in Microarray Experiments
-
Black M, Doerge R: Calculation of the Minimum Number of Replicate Spots Required for Detection of Significant Gene Expression Fold Change in Microarray Experiments. Bioinformatics 2002, 18(12):1609-1616.
-
(2002)
Bioinformatics
, vol.18
, Issue.12
, pp. 1609-1616
-
-
Black, M.1
Doerge, R.2
-
30
-
-
0000884487
-
Experimental Design for Gene Expression Microarrays
-
Kerr M, Churchill G: Experimental Design for Gene Expression Microarrays. Biostatistics 2001, 2:183-201.
-
(2001)
Biostatistics
, vol.2
, pp. 183-201
-
-
Kerr, M.1
Churchill, G.2
-
31
-
-
0035032570
-
A Statistical Design and the Analysis of Gene Expression Microarrays
-
Kerr M, Churchill G: A Statistical Design and the Analysis of Gene Expression Microarrays. Genetics Research 2001, 77:123-128.
-
(2001)
Genetics Research
, vol.77
, pp. 123-128
-
-
Kerr, M.1
Churchill, G.2
-
32
-
-
0036319960
-
Design Issues for cDNA Microarray Experiments
-
Yang Y, Speed T: Design Issues for cDNA Microarray Experiments. Nature Reviews Genetics 2002, 3:579-588.
-
(2002)
Nature Reviews Genetics
, vol.3
, pp. 579-588
-
-
Yang, Y.1
Speed, T.2
-
34
-
-
0034911875
-
An Efficient and Robust Statistical Modeling Approach to Discover Differentially Expressed Genes using Genomic Expression Profiles
-
Thomas JG, Olson JM, Tapscott SJ, Zhao LP: An Efficient and Robust Statistical Modeling Approach to Discover Differentially Expressed Genes using Genomic Expression Profiles. Genome Research 2001, 11:1227-1236.
-
(2001)
Genome Research
, vol.11
, pp. 1227-1236
-
-
Thomas, J.G.1
Olson, J.M.2
Tapscott, S.J.3
Zhao, L.P.4
-
35
-
-
84870267223
-
The Generalization of Student's Problem When Several Populations are Involved
-
Welch B: The Generalization of Student's Problem When Several Populations are Involved. Biometrika 1947, 34:28-35.
-
(1947)
Biometrika
, vol.34
, pp. 28-35
-
-
Welch, B.1
-
36
-
-
33645762226
-
A Sharper Bonferroni Procedure for Multiple Tests of Significance
-
Hochberg Y: A Sharper Bonferroni Procedure for Multiple Tests of Significance. Biometrika 1988, 75:800-803.
-
(1988)
Biometrika
, vol.75
, pp. 800-803
-
-
Hochberg, Y.1
-
38
-
-
0036738906
-
Determination of Minimum Sample Size and Discriminatory Expression Patterns
-
Hwang D, Schmitt WA, Stephanopoulos G, Stephanopoulos G: Determination of Minimum Sample Size and Discriminatory Expression Patterns. Bioinformatics 2002, 18:1184-1193.
-
(2002)
Bioinformatics
, vol.18
, pp. 1184-1193
-
-
Hwang, D.1
Schmitt, W.A.2
Stephanopoulos, G.3
Stephanopoulos, G.4
-
41
-
-
0036677672
-
Mapping Physiological States from Microarray Expression Measurements
-
Stephanopoulos G, Hwang D, Schmitt WA, Misra J, Stephanopoulos G: Mapping Physiological States from Microarray Expression Measurements. Bioinformatics 2002, 18(8):1054-1063.
-
(2002)
Bioinformatics
, vol.18
, Issue.8
, pp. 1054-1063
-
-
Stephanopoulos, G.1
Hwang, D.2
Schmitt, W.A.3
Misra, J.4
Stephanopoulos, G.5
-
42
-
-
24944576690
-
Regulation of Mouse Hepatic Genes in Response to Diet Induced Obesity, Insulin Resistance and Fasting
-
Raab RM, Bullen J, Kelleher J, Mantzoros C, Stephanopoulos G: Regulation of Mouse Hepatic Genes in Response to Diet Induced Obesity, Insulin Resistance and Fasting. Nutrition & Metabolism 2005, 2:15.
-
(2005)
Nutrition & Metabolism
, vol.2
, pp. 15
-
-
Raab, R.M.1
Bullen, J.2
Kelleher, J.3
Mantzoros, C.4
Stephanopoulos, G.5
-
44
-
-
0036069214
-
Interactive Exploration of Microarray Expression Patterns in a Reduced Dimensional Space
-
Misra J, Schmitt W, Hwang D, Hsiao L, Gullans S, Stephanopoulos G: Interactive Exploration of Microarray Expression Patterns in a Reduced Dimensional Space. Genome Research 2002, 12:1112-1120.
-
(2002)
Genome Research
, vol.12
, pp. 1112-1120
-
-
Misra, J.1
Schmitt, W.2
Hwang, D.3
Hsiao, L.4
Gullans, S.5
Stephanopoulos, G.6
-
45
-
-
0037390670
-
Separable Nonlinear Least Squares: The Variable Projection Method and Its Applications
-
Golub G, Pereya V: Separable Nonlinear Least Squares: the Variable Projection Method and Its Applications. Inverse Problems 2003, 19:R1-R26.
-
(2003)
Inverse Problems
, vol.19
-
-
Golub, G.1
Pereya, V.2
-
47
-
-
0032441150
-
Cluster Analysis and Display of Genome-Wide Expression Patterns
-
Eisen M, Spellman P, Brown P, Botstein D: Cluster Analysis and Display of Genome-Wide Expression Patterns. Proceedings of the National Academies of Science - USA 1998, 95(25):14863-14868.
-
(1998)
Proceedings of the National Academies of Science - USA
, vol.95
, Issue.25
, pp. 14863-14868
-
-
Eisen, M.1
Spellman, P.2
Brown, P.3
Botstein, D.4
-
48
-
-
0036640105
-
Co-Expression Pattern from DNA Microarray Experiments as a Tool for Operon Prediction
-
Sabatti C, Rohlin L, Oh M, Liao J: Co-Expression Pattern from DNA Microarray Experiments as a Tool for Operon Prediction. Nucleic Acids Research 2002, 30(13):2886-2893.
-
(2002)
Nucleic Acids Research
, vol.30
, Issue.13
, pp. 2886-2893
-
-
Sabatti, C.1
Rohlin, L.2
Oh, M.3
Liao, J.4
-
49
-
-
1442282950
-
Metabolic and Transcriptional Patterns Accompanying Glutamine Depletion and Repletion in Mouse Hepatoma Cells: A Model for Physiological Regulatory Networks
-
Wong M, Raab R, Rigoutsos I, Stephanopoulos G, Kelleher J: Metabolic and Transcriptional Patterns Accompanying Glutamine Depletion and Repletion in Mouse Hepatoma Cells: A Model for Physiological Regulatory Networks. Physiological Genomics 2004, 16:247-255.
-
(2004)
Physiological Genomics
, vol.16
, pp. 247-255
-
-
Wong, M.1
Raab, R.2
Rigoutsos, I.3
Stephanopoulos, G.4
Kelleher, J.5
-
50
-
-
0036898577
-
Microarray Data Normalization and Transformation
-
Quackenbush J: Microarray Data Normalization and Transformation. Nature Genetics 2002, 32:496-501.
-
(2002)
Nature Genetics
, vol.32
, pp. 496-501
-
-
Quackenbush, J.1
-
51
-
-
1342294092
-
Normalization for cDNA Microarray Data: A Robust Composite Method Addressing Single and Multiple Slide Systematic Variation
-
Yang Y, Dudoit S, Luu P, Lin D, Peng V, Ngai J, Speed T: Normalization for cDNA Microarray Data: A Robust Composite Method Addressing Single and Multiple Slide Systematic Variation. Nucleic Acids Research 2002, 30(4):e15.
-
(2002)
Nucleic Acids Research
, vol.30
, Issue.4
-
-
Yang, Y.1
Dudoit, S.2
Luu, P.3
Lin, D.4
Peng, V.5
Ngai, J.6
Speed, T.7
-
52
-
-
0037342510
-
Comparisons and Validation of Statistical Clustering Techniques for Microarray Gene Expression Data
-
Datta S, Datta S: Comparisons and Validation of Statistical Clustering Techniques for Microarray Gene Expression Data. Bioinformatics 2003, 19(4):459-466.
-
(2003)
Bioinformatics
, vol.19
, Issue.4
, pp. 459-466
-
-
Datta, S.1
Datta, S.2
-
53
-
-
0037057374
-
Exploring the Conditional Coregulation of Yeast Gene Expression through Fuzzy K-Means Clustering
-
Gasch A, Eisen M: Exploring the Conditional Coregulation of Yeast Gene Expression through Fuzzy K-Means Clustering. Genome Biology 2002, 3(11):0059.1.
-
(2002)
Genome Biology
, vol.3
, Issue.11
-
-
Gasch, A.1
Eisen, M.2
-
54
-
-
0036141951
-
Finding Genes in the C2C12 Osteogenic Pathway by K-nearest-neighbor Classification of Expression Data
-
Theilhaber J, Connolly T, Roman-Roman S, Bushnell S, Jackson A, Call K, Garcia T, Baron R: Finding Genes in the C2C12 Osteogenic Pathway by K-nearest-neighbor Classification of Expression Data. Genome Research 2002, 12:165-76.
-
(2002)
Genome Research
, vol.12
, pp. 165-176
-
-
Theilhaber, J.1
Connolly, T.2
Roman-Roman, S.3
Bushnell, S.4
Jackson, A.5
Call, K.6
Garcia, T.7
Baron, R.8
-
55
-
-
0033027794
-
Interpreting Patterns of Gene Expression with Self-Organizing Maps: Methods and Applications to Homeopoietic Differentiation
-
Tamayo P, Slonim D, Mesirov J, Zgu J, Kitareewan Q, Dmitrovsky S, Lander E, Golub T: Interpreting Patterns of Gene Expression with Self-Organizing Maps: Methods and Applications to Homeopoietic Differentiation. Proceedings of the National Academies of Science - USA 1999, 96:2907-2912.
-
(1999)
Proceedings of the National Academies of Science - USA
, vol.96
, pp. 2907-2912
-
-
Tamayo, P.1
Slonim, D.2
Mesirov, J.3
Zgu, J.4
Kitareewan, Q.5
Dmitrovsky, S.6
Lander, E.7
Golub, T.8
-
56
-
-
13244278004
-
Influence of Microarrays Experiments Missing Values on the Stability of Gene Groups by Hierarchial Clustering
-
de Brevern A, Hazout S, Malpertuy A: Influence of Microarrays Experiments Missing Values on the Stability of Gene Groups by Hierarchial Clustering. BMC Bioinformatics 2004, 5:160.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 160
-
-
De Brevern, A.1
Hazout, S.2
Malpertuy, A.3
-
57
-
-
84996113208
-
Transient Responses of Hybridoma Cells to Nutrient Additions in Continuous Culture. 1. Glucose Pulse and Step Changes
-
Miller W, Wilke C, Blanch H: Transient Responses of Hybridoma Cells to Nutrient Additions in Continuous Culture. 1. Glucose Pulse and Step Changes. Biotechnology & Bioengineering 1989, 33:477-486.
-
(1989)
Biotechnology & Bioengineering
, vol.33
, pp. 477-486
-
-
Miller, W.1
Wilke, C.2
Blanch, H.3
-
58
-
-
0030057186
-
Glucose and Glutamine Metabolism in C6 Glioma Cells Studied by Carbon 13 NMR
-
Portais J, Voisin P, Merle M, Canioni P: Glucose and Glutamine Metabolism in C6 Glioma Cells Studied by Carbon 13 NMR. Biochimie 1996, 78:155-164.
-
(1996)
Biochimie
, vol.78
, pp. 155-164
-
-
Portais, J.1
Voisin, P.2
Merle, M.3
Canioni, P.4
-
59
-
-
0028902940
-
Isotopomer Analysis of Citric Acid Cycle and Gluconeogenesis in Rat Liver. Reversibility of Isocitrate Dehydrogenase and Involvement of ATP-Citrate Lyase in Gluconeogenesis
-
Rosiers CD, Donato LD, Comte B, Laplante A, Marcoux C, David F, Fernandez C, Brunengraber H: Isotopomer Analysis of Citric Acid Cycle and Gluconeogenesis in Rat Liver. Reversibility of Isocitrate Dehydrogenase and Involvement of ATP-Citrate Lyase in Gluconeogenesis. Journal of Biological Chemistry 1995, 270:10027-10036.
-
(1995)
Journal of Biological Chemistry
, vol.270
, pp. 10027-10036
-
-
Rosiers, C.D.1
Donato, L.D.2
Comte, B.3
Laplante, A.4
Marcoux, C.5
David, F.6
Fernandez, C.7
Brunengraber, H.8
-
60
-
-
0029591465
-
Glutamine Metabolism in AS-30D Hepatoma Cells. Evidence for its Conversion into Lipids via Reductive Carboxylation
-
Holleran A, Briscoe D, Fiskum G, Kelleher J: Glutamine Metabolism in AS-30D Hepatoma Cells. Evidence for its Conversion into Lipids via Reductive Carboxylation. Molecular Cell Biochemistry 1995, 152:95-101.
-
(1995)
Molecular Cell Biochemistry
, vol.152
, pp. 95-101
-
-
Holleran, A.1
Briscoe, D.2
Fiskum, G.3
Kelleher, J.4
-
61
-
-
0345743695
-
Transcriptome-based Determination of Multiple Transcription Regulator Activities in Escherichia coli by Using Network Component Analysis
-
Kao K, Yang Y, Boscolo R, Sabatti C, Roychowdhury V, Liao J: Transcriptome-based Determination of Multiple Transcription Regulator Activities in Escherichia coli by Using Network Component Analysis. Proceedings of the National Academies of Science - USA 2004, 101(2):641-646.
-
(2004)
Proceedings of the National Academies of Science - USA
, vol.101
, Issue.2
, pp. 641-646
-
-
Kao, K.1
Yang, Y.2
Boscolo, R.3
Sabatti, C.4
Roychowdhury, V.5
Liao, J.6
-
62
-
-
0345824737
-
Network Component Analysis: Reconstruction of Regulatory Signals in Biological Systems
-
Liao J, Boscolo R, Yang Y, Tran L, Sabatti C, Roychowdhury V: Network Component Analysis: Reconstruction of Regulatory Signals in Biological Systems. Proceedings of the National Academies of Science - USA 2003, 100(26):15522-15527.
-
(2003)
Proceedings of the National Academies of Science - USA
, vol.100
, Issue.26
, pp. 15522-15527
-
-
Liao, J.1
Boscolo, R.2
Yang, Y.3
Tran, L.4
Sabatti, C.5
Roychowdhury, V.6
-
63
-
-
4444352289
-
Elucidation of Gene Interaction Networks Through Time-Lagged Correlation Analysis of Transcriptional Data
-
Schmitt W, Raab R, Stephanopoulos G: Elucidation of Gene Interaction Networks Through Time-Lagged Correlation Analysis of Transcriptional Data. Genome Research 2004, 14:1654-1663.
-
(2004)
Genome Research
, vol.14
, pp. 1654-1663
-
-
Schmitt, W.1
Raab, R.2
Stephanopoulos, G.3
-
64
-
-
11144325691
-
Partial Least-Squares Regression: A Tutorial
-
Geladi P, Kowalski B: Partial Least-Squares Regression: A Tutorial. Analytica Chimica Acta 1986, 185:1-17.
-
(1986)
Analytica Chimica Acta
, vol.185
, pp. 1-17
-
-
Geladi, P.1
Kowalski, B.2
-
65
-
-
0034682504
-
Fundamental Patterns Underlying Gene Expression Profiles: Simplicity from Complexity
-
Holter N, Mitra M, Maritan A, Cleplak M, Banavar J, Fedoroff N: Fundamental Patterns Underlying Gene Expression Profiles: Simplicity from Complexity. Proceedings of the National Academies of Science - USA 2000, 97:8409-8414.
-
(2000)
Proceedings of the National Academies of Science - USA
, vol.97
, pp. 8409-8414
-
-
Holter, N.1
Mitra, M.2
Maritan, A.3
Cleplak, M.4
Banavar, J.5
Fedoroff, N.6
-
66
-
-
0033691754
-
Using Bayesian Networks to Analyze Expression Data
-
Friedman N, Linial M, Nachman I, Pe'er D: Using Bayesian Networks to Analyze Expression Data. Fourth Annual International Conference on Computational Molecular Biology, Tokyo, Japan 2000.
-
(2000)
Fourth Annual International Conference on Computational Molecular Biology, Tokyo, Japan
-
-
Friedman, N.1
Linial, M.2
Nachman, I.3
Pe'er, D.4
-
67
-
-
4444375949
-
Distributivity, a General Information Theoretic Network Measurement, or Why the Whole is More than the Sum of its Parts
-
Somogyi R, Fuhrman S: Distributivity, A General Information Theoretic Network Measurement, or Why the Whole is More than the Sum of its Parts. The International Workshop on Information Processing in Cells and Tissues, Sheffield, UK 1997.
-
(1997)
The International Workshop on Information Processing in Cells and Tissues, Sheffield, UK
-
-
Somogyi, R.1
Fuhrman, S.2
-
68
-
-
0000122278
-
Statistical Construction of Chemical-Reaction Mechanisms from Measured Time-Series
-
Arkin A, Ross J: Statistical Construction of Chemical-Reaction Mechanisms From Measured Time-Series. Journal of Physical Chemistry 1995, 99:970-979.
-
(1995)
Journal of Physical Chemistry
, vol.99
, pp. 970-979
-
-
Arkin, A.1
Ross, J.2
-
71
-
-
0037370309
-
An epi-allelic series of p53 hypomorphs created by stable RNAi produces distinct tumor phenotypes in vivo
-
Hemann MT, Fridman JS, Zilfou JT, Hernando E, Paddison PJ, Cordon-Cardo C, Hannon GJ, Lowe SW: An epi-allelic series of p53 hypomorphs created by stable RNAi produces distinct tumor phenotypes in vivo. Nat Genet 2003, 33(3):396-400.
-
(2003)
Nat Genet
, vol.33
, Issue.3
, pp. 396-400
-
-
Hemann, M.T.1
Fridman, J.S.2
Zilfou, J.T.3
Hernando, E.4
Paddison, P.J.5
Cordon-Cardo, C.6
Hannon, G.J.7
Lowe, S.W.8
-
72
-
-
0036788304
-
Gene Silencing in Mammals by Small Interfering RNAs
-
McManus M, Sharp P: Gene Silencing in Mammals by Small Interfering RNAs. Nature Reviews Genetics 2002, 3:737-747.
-
(2002)
Nature Reviews Genetics
, vol.3
, pp. 737-747
-
-
McManus, M.1
Sharp, P.2
-
73
-
-
0037019339
-
RNA interference in adult mice
-
McCaffrey AP, Meuse L, Pham TTT, Conklin DS, Hannon GJ, Kay MA: RNA interference in adult mice. Nature 2002, 418(6893):38-39.
-
(2002)
Nature
, vol.418
, Issue.6893
, pp. 38-39
-
-
McCaffrey, A.P.1
Meuse, L.2
Pham, T.T.T.3
Conklin, D.S.4
Hannon, G.J.5
Kay, M.A.6
-
74
-
-
0037062951
-
RNA Interference
-
Hannon G: RNA Interference. Nature 2002, 418:244-251.
-
(2002)
Nature
, vol.418
, pp. 244-251
-
-
Hannon, G.1
-
75
-
-
0037213559
-
Mammalian RNAi for the Masses
-
Shi Y: Mammalian RNAi for the Masses. Trends in Genetics 2003, 19:9-12.
-
(2003)
Trends in Genetics
, vol.19
, pp. 9-12
-
-
Shi, Y.1
-
76
-
-
0037448528
-
Genome-wide RNAi Analysis of Caenorhabditis elegans Fat Regulatory Genes
-
Ashrafi K, Chang FY, Watts JL, Fraser AG, Kamath RS, Ahringer J, Ruvkun G: Genome-wide RNAi Analysis of Caenorhabditis elegans Fat Regulatory Genes. Nature 2003, 421:268-272.
-
(2003)
Nature
, vol.421
, pp. 268-272
-
-
Ashrafi, K.1
Chang, F.Y.2
Watts, J.L.3
Fraser, A.G.4
Kamath, R.S.5
Ahringer, J.6
Ruvkun, G.7
-
77
-
-
31944439450
-
Enigma, a Mitochondrial Protein Affecting Lifespan and Oxidative Stress Response in Drosophila
-
Mourikis P, Hurlbut G, Artavanis-Tsakonas S: Enigma, a Mitochondrial Protein Affecting Lifespan and Oxidative Stress Response in Drosophila. Proc Natl Acad Sci USA 2006, 103(5):1307-1312.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.5
, pp. 1307-1312
-
-
Mourikis, P.1
Hurlbut, G.2
Artavanis-Tsakonas, S.3
-
78
-
-
2542449066
-
Long Double-stranded RNA-mediated RNA interference as a Tool to Achieve Site-specific Silencing of Hypothalamic Neuropeptides
-
Bhargava A, Dallman M, Pearce D, Choi S: Long Double-stranded RNA-mediated RNA interference as a Tool to Achieve Site-specific Silencing of Hypothalamic Neuropeptides. Brain Res Brain Res Protoc 2004, 13(2):115-125.
-
(2004)
Brain Res Brain Res Protoc
, vol.13
, Issue.2
, pp. 115-125
-
-
Bhargava, A.1
Dallman, M.2
Pearce, D.3
Choi, S.4
-
79
-
-
0141561906
-
Will Fatty Worms Help Cure Human Obesity?
-
Chiang S, MacDougald O: Will Fatty Worms Help Cure Human Obesity? Trends in Genetics 2003, 19(10):523-525.
-
(2003)
Trends in Genetics
, vol.19
, Issue.10
, pp. 523-525
-
-
Chiang, S.1
MacDougald, O.2
-
80
-
-
0037448528
-
Genome-wide RNAi Analysis of Caenorhabditis elegans Fat Regulatory Genes
-
Ashrafi K, Chang FY, Watts JL, Fraser AG, Kamath RS, Ahringer J, Ruvkun G: Genome-wide RNAi Analysis of Caenorhabditis elegans Fat Regulatory Genes. Nature 2002, 42:268-272.
-
(2002)
Nature
, vol.42
, pp. 268-272
-
-
Ashrafi, K.1
Chang, F.Y.2
Watts, J.L.3
Fraser, A.G.4
Kamath, R.S.5
Ahringer, J.6
Ruvkun, G.7
-
81
-
-
0035128859
-
Large Scale Analysis of Gene Function in Caenorhabditis elegans by High-Throughput RNAi
-
Maeda I, Kohara Y, Yamamoto M, Sugimoto A: Large Scale Analysis of Gene Function in Caenorhabditis elegans by High-Throughput RNAi. Current Biology 2001, 11:171-176.
-
(2001)
Current Biology
, vol.11
, pp. 171-176
-
-
Maeda, I.1
Kohara, Y.2
Yamamoto, M.3
Sugimoto, A.4
-
82
-
-
11144247743
-
Accurate multiplex gene synthesis from programmable DNA microchips
-
Tian H, Gea J: Accurate multiplex gene synthesis from programmable DNA microchips. Nature 2004, 432:1050-1054.
-
(2004)
Nature
, vol.432
, pp. 1050-1054
-
-
Tian, H.1
Gea, J.2
-
83
-
-
27644564234
-
Combining two genomes in one cell: Stable cloning of the Synechocystic PCC6803 genome in the Bacillus subtilis 168 genome
-
Itaya K, Tea M: Combining two genomes in one cell: Stable cloning of the Synechocystic PCC6803 genome in the Bacillus subtilis 168 genome. Proc Natl Acad Sci USA 2005, 102:15971-15976.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 15971-15976
-
-
Itaya, K.1
Tea, M.2
-
84
-
-
0036641368
-
Using Mouse Models to Dissect the Genetics of Obesity
-
Brockmann GA, Bevova MR: Using Mouse Models to Dissect the Genetics of Obesity. TRENDS in Genetics 2002, 18:367-376.
-
(2002)
Trends in Genetics
, vol.18
, pp. 367-376
-
-
Brockmann, G.A.1
Bevova, M.R.2
-
85
-
-
0142030041
-
Genetic Contributions to Body Weight in Mice: Relationship of Exploratory Behavior to Weight
-
Zhang S, Gershenfeld H: Genetic Contributions to Body Weight in Mice: Relationship of Exploratory Behavior to Weight. Obesity Research 2003, 11(7):828-838.
-
(2003)
Obesity Research
, vol.11
, Issue.7
, pp. 828-838
-
-
Zhang, S.1
Gershenfeld, H.2
-
86
-
-
7144263739
-
Localization of Two Insulin-Dependent Diabetes (Idd) Genes to the Idd10 Region on Mouse Chromosome 3
-
Podolin P, Denny P, Armitage N, Lord C, Hill N: Localization of Two Insulin-Dependent Diabetes (Idd) Genes to the Idd10 Region on Mouse Chromosome 3. Mammalian Genome 1998, 9:283-286.
-
(1998)
Mammalian Genome
, vol.9
, pp. 283-286
-
-
Podolin, P.1
Denny, P.2
Armitage, N.3
Lord, C.4
Hill, N.5
-
87
-
-
15944376562
-
Strategies for Mapping and Cloning Quantitative Trait Genes in Rodents
-
Flint J, Valdar W, Shifman S, Mott R: Strategies for Mapping and Cloning Quantitative Trait Genes in Rodents. Nature Reviews Genetics 2005, 6:271-286.
-
(2005)
Nature Reviews Genetics
, vol.6
, pp. 271-286
-
-
Flint, J.1
Valdar, W.2
Shifman, S.3
Mott, R.4
-
88
-
-
0036648981
-
From QTL to Gene: The Harvest Begins
-
Korstanje R, Paigen B: From QTL to Gene: the Harvest Begins. Nature Genetics 2002, 31:235-236.
-
(2002)
Nature Genetics
, vol.31
, pp. 235-236
-
-
Korstanje, R.1
Paigen, B.2
-
89
-
-
0030973207
-
A Simple Method to Calculate Resolving Power and Confidence Interval of QTL Map Location
-
Darvasi A, Soller M: A Simple Method to Calculate Resolving Power and Confidence Interval of QTL Map Location. Behavioral Genetics 1997, 27:125-132.
-
(1997)
Behavioral Genetics
, vol.27
, pp. 125-132
-
-
Darvasi, A.1
Soller, M.2
-
90
-
-
0032958470
-
Identification of CD36 (Fat) as an Insulin-Resistance Gene Causing Defective Fatty Acid and Glucose Metabolism in Hypertensive Rats
-
Aitman T, Glazier A, Wallace C, Cooper L, Norsworthy P, Wahid F, Al-Majali K, Trembling P, Mann C, Shoulders C, Graf D, Lezin ES, Kurtz T, Kren V, Pravenac M, Ibrahimi A, Abumrad N, Stanton L, Scott J: Identification of CD36 (Fat) as an Insulin-Resistance Gene Causing Defective Fatty Acid and Glucose Metabolism in Hypertensive Rats. Nature Genetics 1999, 21:76-83.
-
(1999)
Nature Genetics
, vol.21
, pp. 76-83
-
-
Aitman, T.1
Glazier, A.2
Wallace, C.3
Cooper, L.4
Norsworthy, P.5
Wahid, F.6
Al-Majali, K.7
Trembling, P.8
Mann, C.9
Shoulders, C.10
Graf, D.11
Lezin, E.S.12
Kurtz, T.13
Kren, V.14
Pravenac, M.15
Ibrahimi, A.16
Abumrad, N.17
Stanton, L.18
Scott, J.19
-
91
-
-
33745260467
-
Physiogenomic Analysis of Weight Loss Induced by Dietary Carbohydrate Restriction
-
Ruano G, Windemuth A, Kocherla M, Holford T, Fernandex M, Forsythe C, Wood R, Kraemer W, Volek J: Physiogenomic Analysis of Weight Loss Induced by Dietary Carbohydrate Restriction. Nutrition & Metabolism 2006, 3:20.
-
(2006)
Nutrition & Metabolism
, vol.3
, pp. 20
-
-
Ruano, G.1
Windemuth, A.2
Kocherla, M.3
Holford, T.4
Fernandex, M.5
Forsythe, C.6
Wood, R.7
Kraemer, W.8
Volek, J.9
-
92
-
-
0000897884
-
Chemical Specificity of Nucleic Acids and Mechanism of their Enzymatic Degradation
-
Chargaff E: Chemical Specificity of Nucleic Acids and Mechanism of their Enzymatic Degradation. Experientia 1950, 6:201-209.
-
(1950)
Experientia
, vol.6
, pp. 201-209
-
-
Chargaff, E.1
|