-
1
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
PID: 9843981, COI: 1:CAS:528:DyaK1cXotVGmurk%3D
-
Eisen MB, Spellman PT, Brown PO, Botstein D: Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci USA. 1998, 95: 14863-14868. 10.1073/pnas.95.25.14863. DOI: 10.1073/pnas.95.25.14863
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 14863-14868
-
-
Eisen, M.B.1
Spellman, P.T.2
Brown, P.O.3
Botstein, D.4
-
2
-
-
0033637153
-
Genomic expression programs in the response of yeast cells to environmental changes
-
PID: 11102521, COI: 1:CAS:528:DC%2BD3cXovFansbw%3D
-
Gasch AP, Spellman PT, Kao CM, Carmel-Harel O, Eisen MB, Storz G, Botstein D, Brown PO: Genomic expression programs in the response of yeast cells to environmental changes. Mol Biol Cell. 2000, 11: 4241-4257. DOI: 10.1091/mbc.11.12.4241
-
(2000)
Mol Biol Cell
, vol.11
, pp. 4241-4257
-
-
Gasch, A.P.1
Spellman, P.T.2
Kao, C.M.3
Carmel-Harel, O.4
Eisen, M.B.5
Storz, G.6
Botstein, D.7
Brown, P.O.8
-
3
-
-
0034616016
-
Desferrioxamine-mediated iron uptake in Saccharomyces cerevisiae. Evidence for two pathways of iron uptake
-
PID: 10744769, COI: 1:CAS:528:DC%2BD3cXisFWju70%3D
-
Yun CW, Ferea T, Rashford J, Ardon O, Brown PO, Botstein D, Kaplan J, Philpott CC: Desferrioxamine-mediated iron uptake in Saccharomyces cerevisiae. Evidence for two pathways of iron uptake. J Biol Chem. 2000, 275: 10709-10715. 10.1074/jbc.275.14.10709. DOI: 10.1074/jbc.275.14.10709
-
(2000)
J Biol Chem
, vol.275
, pp. 10709-10715
-
-
Yun, C.W.1
Ferea, T.2
Rashford, J.3
Ardon, O.4
Brown, P.O.5
Botstein, D.6
Kaplan, J.7
Philpott, C.C.8
-
4
-
-
0034608877
-
Genome-wide characterization of the Zap1p zinc-responsive regulon in yeast
-
PID: 10884426, COI: 1:CAS:528:DC%2BD3cXkvFCnu70%3D
-
Lyons TJ, Gasch AP, Gaither LA, Botstein D, Brown PO, Eide DJ: Genome-wide characterization of the Zap1p zinc-responsive regulon in yeast. Proc Natl Acad Sci USA. 2000, 97: 7957-7962. 10.1073/pnas.97.14.7957. DOI: 10.1073/pnas.97.14.7957
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 7957-7962
-
-
Lyons, T.J.1
Gasch, A.P.2
Gaither, L.A.3
Botstein, D.4
Brown, P.O.5
Eide, D.J.6
-
5
-
-
0033637520
-
New components of a system for phosphate accumulation and polyphosphate metabolism in Saccharomyces cerevisiaerevealed by genomic expression analysis
-
PID: 11102525, COI: 1:CAS:528:DC%2BD3cXovFansbg%3D
-
Ogawa N, DeRisi J, Brown PO: New components of a system for phosphate accumulation and polyphosphate metabolism in Saccharomyces cerevisiae revealed by genomic expression analysis. Mol Biol Cell. 2000, 11: 4309-4321. DOI: 10.1091/mbc.11.12.4309
-
(2000)
Mol Biol Cell
, vol.11
, pp. 4309-4321
-
-
Ogawa, N.1
DeRisi, J.2
Brown, P.O.3
-
6
-
-
0034724520
-
Functional and genomic analyses reveal an essential coordination between the unfolded protein response and ER-associated degradation
-
PID: 10847680, COI: 1:CAS:528:DC%2BD3cXjtFSrtL4%3D
-
Travers KJ, Patil CK, Wodicka L, Lockhart DJ, Weissman JS, Walter P: Functional and genomic analyses reveal an essential coordination between the unfolded protein response and ER-associated degradation. Cell. 2000, 101: 249-258. DOI: 10.1016/S0092-8674(00)80835-1
-
(2000)
Cell
, vol.101
, pp. 249-258
-
-
Travers, K.J.1
Patil, C.K.2
Wodicka, L.3
Lockhart, D.J.4
Weissman, J.S.5
Walter, P.6
-
7
-
-
0001457509
-
Some methods for classification and analysis of multivariate observations
-
Le Cam L, Neyman J, (eds), University of California, Berkeley Press, Berkeley
-
MacQueen J: Some methods for classification and analysis of multivariate observations. In Proceedings of the Fifth Berkeley Symposium on Mathematics, Statistics and Probability. Edited by: Le Cam L, Neyman J. 1967, Berkeley: University of California, Berkeley Press, 281-297.
-
(1967)
In Proceedings of the Fifth Berkeley Symposium on Mathematics, Statistics and Probability
, pp. 281-297
-
-
MacQueen, J.1
-
8
-
-
0033028596
-
Systematic determination of genetic network architecture
-
PID: 10391217, COI: 1:CAS:528:DyaK1MXkt1eqsbY%3D
-
Tavazoie S, Hughes JD, Campbell MJ, Cho RJ, Church GM: Systematic determination of genetic network architecture. Nat Genet. 1999, 22: 281-285. 10.1038/10343. DOI: 10.1038/10343
-
(1999)
Nat Genet
, vol.22
, pp. 281-285
-
-
Tavazoie, S.1
Hughes, J.D.2
Campbell, M.J.3
Cho, R.J.4
Church, G.M.5
-
9
-
-
0003775062
-
-
Edited by: Bezdek JC, Pal SK, New York: IEEE
-
Fuzzy models for Pattern Recognition. Edited by: Bezdek JC, Pal SK. 1992, New York: IEEE Press
-
(1992)
Fuzzy Models for Pattern Recognition
-
-
-
10
-
-
0033707946
-
Using Bayesian networks to analyze expression data
-
PID: 11108481, COI: 1:CAS:528:DC%2BD3cXosVKjsb0%3D
-
Friedman N, Linial M, Nachman I, Pe'er D: Using Bayesian networks to analyze expression data. J Comput Biol. 2000, 7: 601-620. 10.1089/106652700750050961. DOI: 10.1089/106652700750050961
-
(2000)
J Comput Biol
, vol.7
, pp. 601-620
-
-
Friedman, N.1
Linial, M.2
Nachman, I.3
Pe'er, D.4
-
11
-
-
0036699526
-
Revealing modular organization in the yeast transcriptional network
-
PID: 12134151, COI: 1:CAS:528:DC%2BD38Xls1OrsL8%3D
-
Ihmels J, Friedlander G, Bergmann S, Sarig O, Ziv Y, Barkai N: Revealing modular organization in the yeast transcriptional network. Nat Genet. 2002, 31: 370-377.
-
(2002)
Nat Genet
, vol.31
, pp. 370-377
-
-
Ihmels, J.1
Friedlander, G.2
Bergmann, S.3
Sarig, O.4
Ziv, Y.5
Barkai, N.6
-
13
-
-
0024701488
-
Unsupervised optimal fuzzy clustering
-
Gath I, Geva AB: Unsupervised optimal fuzzy clustering. Trans Pattern Analysis Machine Intell. 1989, 11: 773-781. 10.1109/34.192473. DOI: 10.1109/34.192473
-
(1989)
Trans Pattern Analysis Machine Intell
, vol.11
, pp. 773-781
-
-
Gath, I.1
Geva, A.B.2
-
14
-
-
85182639560
-
-
Fuzzy K. [http://rana.lbl.gov/FuzzyK]
-
-
-
Fuzzy, K.1
-
16
-
-
0003862207
-
How many clusters? Which clustering method? Answers via model-based cluster analysis
-
Fraley C, Raftery AE: How many clusters? Which clustering method? Answers via model-based cluster analysis. Techn Rep. 1998, 329: 1-19.
-
(1998)
Techn Rep
, vol.329
, pp. 1-19
-
-
Fraley, C.1
Raftery, A.E.2
-
17
-
-
0037172724
-
A prediction-based resampling method for estimating the number of clusters in a dataset
-
research0036.1
-
Dudoit S, Fridlyand J: A prediction-based resampling method for estimating the number of clusters in a dataset. Genome Biol. 2002, 3: research0036.1-0036.21. 10.1186/gb-2002-3-7-research0036. DOI: 10.1186/gb-2002-3-7-research0036
-
(2002)
Genome Biol
, vol.3
-
-
Dudoit, S.1
Fridlyand, J.2
-
18
-
-
0033657261
-
Principal components analysis to summarize microarray experiments: application to sporulation time series
-
Raychaudhuri S, Stuart JM, Altman RB: Principal components analysis to summarize microarray experiments: application to sporulation time series. Pac Symp Biocomput. 2000, 455-466.
-
(2000)
Pac Symp Biocomput
, pp. 455-466
-
-
Raychaudhuri, S.1
Stuart, J.M.2
Altman, R.B.3
-
19
-
-
0034730140
-
Singular value decomposition for genome-wide expression data processing and modeling
-
PID: 10963673, COI: 1:CAS:528:DC%2BD3cXmtlehsbs%3D
-
Alter O, Brown PO, Botstein D: Singular value decomposition for genome-wide expression data processing and modeling. Proc Natl Acad Sci USA. 2000, 97: 10101-10106. 10.1073/pnas.97.18.10101. DOI: 10.1073/pnas.97.18.10101
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 10101-10106
-
-
Alter, O.1
Brown, P.O.2
Botstein, D.3
-
20
-
-
0035162698
-
Genomic expression responses to DNA-damaging agents and the regulatory role of the yeast ATR homolog Mec1p
-
PID: 11598186, COI: 1:CAS:528:DC%2BD3MXns1Chsbg%3D
-
Gasch AP, Huang M, Metzner S, Botstein D, Elledge SJ, Brown PO: Genomic expression responses to DNA-damaging agents and the regulatory role of the yeast ATR homolog Mec1p. Mol Biol Cell. 2001, 12: 2987-3003. DOI: 10.1091/mbc.12.10.2987
-
(2001)
Mol Biol Cell
, vol.12
, pp. 2987-3003
-
-
Gasch, A.P.1
Huang, M.2
Metzner, S.3
Botstein, D.4
Elledge, S.J.5
Brown, P.O.6
-
22
-
-
0031240609
-
A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
-
PID: 10065837, COI: 1:STN:280:DyaK1M7mtlOhsg%3D%3D
-
Nielsen H, Engelbrecht J, Brunak S, von Heijne G: A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Int J Neural Syst. 1997, 8: 581-599. 10.1142/S0129065797000537. DOI: 10.1142/S0129065797000537
-
(1997)
Int J Neural Syst
, vol.8
, pp. 581-599
-
-
Nielsen, H.1
Engelbrecht, J.2
Brunak, S.3
von Heijne, G.4
-
23
-
-
0033208953
-
Role and regulation of the ER chaperone BiP
-
PID: 10597629, COI: 1:CAS:528:DyaK1MXnvFOmsLs%3D
-
Gething MJ: Role and regulation of the ER chaperone BiP. Semin Cell Dev Biol. 1999, 10: 465-472. 10.1006/scdb.1999.0318. DOI: 10.1006/scdb.1999.0318
-
(1999)
Semin Cell Dev Biol
, vol.10
, pp. 465-472
-
-
Gething, M.J.1
-
24
-
-
0028260121
-
Selective retention of secretory proteins in the yeast endoplasmic reticulum by treatment of cells with a reducing agent
-
PID: 8017105, COI: 1:CAS:528:DyaK2cXis1GmsL4%3D
-
Jamsa E, Simonen M, Makarow M: Selective retention of secretory proteins in the yeast endoplasmic reticulum by treatment of cells with a reducing agent. Yeast. 1994, 10: 355-370. DOI: 10.1002/yea.320100308
-
(1994)
Yeast
, vol.10
, pp. 355-370
-
-
Jamsa, E.1
Simonen, M.2
Makarow, M.3
-
25
-
-
0030297537
-
A novel mechanism for regulating activity of a transcription factor that controls the unfolded protein response
-
PID: 8898193, COI: 1:CAS:528:DyaK28XmvVOktrc%3D
-
Cox JS, Walter P: A novel mechanism for regulating activity of a transcription factor that controls the unfolded protein response. Cell. 1996, 87: 391-404. DOI: 10.1016/S0092-8674(00)81360-4
-
(1996)
Cell
, vol.87
, pp. 391-404
-
-
Cox, J.S.1
Walter, P.2
-
26
-
-
0030228708
-
Signalling from endoplasmic reticulum to nucleus: transcription factor with a basic-leucine zipper motif is required for the unfolded protein - response pathway
-
PID: 9077435, COI: 1:CAS:528:DyaK2sXitVWgug%3D%3D
-
Mori K, Kawahara T, Yoshida H, Yanagi H, Yura T: Signalling from endoplasmic reticulum to nucleus: transcription factor with a basic-leucine zipper motif is required for the unfolded protein - response pathway. Genes Cells. 1996, 1: 803-817. 10.1046/j.1365-2443.1996.d01-274.x. DOI: 10.1046/j.1365-2443.1996.d01-274.x
-
(1996)
Genes Cells
, vol.1
, pp. 803-817
-
-
Mori, K.1
Kawahara, T.2
Yoshida, H.3
Yanagi, H.4
Yura, T.5
-
27
-
-
0029860982
-
Saccharomyces cerevisiae IRE2/HAC1 is involved in IRE1-mediated KAR2expression
-
PID: 8932376, COI: 1:CAS:528:DyaK28XntF2isLg%3D
-
Nikawa J, Akiyoshi M, Hirata S, Fukuda T: Saccharomyces cerevisiae IRE2/HAC1 is involved in IRE1-mediated KAR2 expression. Nucleic Acids Res. 1996, 24: 4222-4226. 10.1093/nar/24.21.4222. DOI: 10.1093/nar/24.21.4222
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 4222-4226
-
-
Nikawa, J.1
Akiyoshi, M.2
Hirata, S.3
Fukuda, T.4
-
28
-
-
0032407243
-
Intracellular signaling from the endoplasmic reticulum to the nucleus
-
PID: 9891790, COI: 1:CAS:528:DyaK1cXnvFyisr0%3D
-
Chapman R, Sidrauski C, Walter P: Intracellular signaling from the endoplasmic reticulum to the nucleus. Annu Rev Cell Dev Biol. 1998, 14: 459-485. 10.1146/annurev.cellbio.14.1.459. DOI: 10.1146/annurev.cellbio.14.1.459
-
(1998)
Annu Rev Cell Dev Biol
, vol.14
, pp. 459-485
-
-
Chapman, R.1
Sidrauski, C.2
Walter, P.3
-
29
-
-
0027324844
-
Transcriptional induction of genes encoding endoplasmic reticulum resident proteins requires a transmembrane protein kinase
-
PID: 8513503, COI: 1:CAS:528:DyaK3sXksValu7g%3D
-
Cox JS, Shamu CE, Walter P: Transcriptional induction of genes encoding endoplasmic reticulum resident proteins requires a transmembrane protein kinase. Cell. 1993, 73: 1197-1206. DOI: 10.1016/0092-8674(93)90648-A
-
(1993)
Cell
, vol.73
, pp. 1197-1206
-
-
Cox, J.S.1
Shamu, C.E.2
Walter, P.3
-
30
-
-
0027305620
-
+/CDC28-related kinase activity is required for signaling from the ER to the nucleus
-
PID: 8358794, COI: 1:CAS:528:DyaK3sXms1ektL0%3D
-
+/CDC28-related kinase activity is required for signaling from the ER to the nucleus. Cell. 1993, 74: 743-756. DOI: 10.1016/0092-8674(93)90521-Q
-
(1993)
Cell
, vol.74
, pp. 743-756
-
-
Mori, K.1
Ma, W.2
Gething, M.J.3
Sambrook, J.4
-
31
-
-
0030899202
-
Saccharomyces cerevisiae KAR2(BiP) gene expression is induced by loss of cytosolic HSP70/Ssa1p through a heat shock element-mediated pathway
-
COI: 1:CAS:528:DyaK2sXis1WiurY%3D
-
Oka M, Kimata Y, Mori K, Kohno K: Saccharomyces cerevisiae KAR2 (BiP) gene expression is induced by loss of cytosolic HSP70/Ssa1p through a heat shock element-mediated pathway. J Biochem (Tokyo). 1997, 121: 578-584. DOI: 10.1093/oxfordjournals.jbchem.a021624
-
(1997)
J Biochem (Tokyo)
, vol.121
, pp. 578-584
-
-
Oka, M.1
Kimata, Y.2
Mori, K.3
Kohno, K.4
-
32
-
-
0023278403
-
Multiple global regulators control HIS4 transcription in yeast
-
PID: 3303332, COI: 1:CAS:528:DyaL2sXlvFaju7Y%3D
-
Arndt KT, Styles C, Fink GR: Multiple global regulators control HIS4 transcription in yeast. Science. 1987, 237: 874-880. DOI: 10.1126/science.3303332
-
(1987)
Science
, vol.237
, pp. 874-880
-
-
Arndt, K.T.1
Styles, C.2
Fink, G.R.3
-
33
-
-
0026755390
-
Coregulation of purine and histidine biosynthesis by the transcriptional activators BAS1 and BAS2
-
PID: 1495962, COI: 1:CAS:528:DyaK38XmtVKhsL0%3D
-
Daignan-Fornier B, Fink GR: Coregulation of purine and histidine biosynthesis by the transcriptional activators BAS1 and BAS2. Proc Natl Acad Sci USA. 1992, 89: 6746-6750. DOI: 10.1073/pnas.89.15.6746
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 6746-6750
-
-
Daignan-Fornier, B.1
Fink, G.R.2
-
34
-
-
0034625801
-
Global expression profiling of yeast treated with an inhibitor of amino acid biosynthesis, sulfometuron methyl
-
PID: 11015603, COI: 1:STN:280:DC%2BD3cvmslemsg%3D%3D
-
Jia MH, Larossa RA, Lee JM, Rafalski A, Derose E, Gonye G, Xue Z: Global expression profiling of yeast treated with an inhibitor of amino acid biosynthesis, sulfometuron methyl. Physiol Genomics. 2000, 3: 83-92.
-
(2000)
Physiol Genomics
, vol.3
, pp. 83-92
-
-
Jia, M.H.1
Larossa, R.A.2
Lee, J.M.3
Rafalski, A.4
Derose, E.5
Gonye, G.6
Xue, Z.7
-
35
-
-
0034973590
-
Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeast
-
PID: 11390663, COI: 1:CAS:528:DC%2BD3MXksVOrtL0%3D
-
Natarajan K, Meyer MR, Jackson BM, Slade D, Roberts C, Hinnebusch AG, Marton MJ: Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeast. Mol Cell Biol. 2001, 21: 4347-4368. 10.1128/MCB.21.13.4347-4368.2001. DOI: 10.1128/MCB.21.13.4347-4368.2001
-
(2001)
Mol Cell Biol
, vol.21
, pp. 4347-4368
-
-
Natarajan, K.1
Meyer, M.R.2
Jackson, B.M.3
Slade, D.4
Roberts, C.5
Hinnebusch, A.G.6
Marton, M.J.7
-
36
-
-
0025283868
-
Yeast centromere binding protein CBF1, of the helix-loop-helix protein family, is required for chromosome stability and methionine prototrophy
-
PID: 2185892, COI: 1:CAS:528:DyaK3cXltFWju78%3D
-
Cai M, Davis RW: Yeast centromere binding protein CBF1, of the helix-loop-helix protein family, is required for chromosome stability and methionine prototrophy. Cell. 1990, 61: 437-446. DOI: 10.1016/0092-8674(90)90525-J
-
(1990)
Cell
, vol.61
, pp. 437-446
-
-
Cai, M.1
Davis, R.W.2
-
37
-
-
0026546494
-
MET4, a leucine zipper protein, and centromere-binding factor 1 are both required for transcriptional activation of sulfur metabolism in Saccharomyces cerevisiae
-
PID: 1549123, COI: 1:CAS:528:DyaK3sXhvVCqtLY%3D
-
Thomas D, Jacquemin I, Surdin-Kerjan Y: MET4, a leucine zipper protein, and centromere-binding factor 1 are both required for transcriptional activation of sulfur metabolism in Saccharomyces cerevisiae. Mol Cell Biol. 1992, 12: 1719-1727. DOI: 10.1128/MCB.12.4.1719
-
(1992)
Mol Cell Biol
, vol.12
, pp. 1719-1727
-
-
Thomas, D.1
Jacquemin, I.2
Surdin-Kerjan, Y.3
-
38
-
-
0030979616
-
Met31p and Met32p, two related zinc finger proteins, are involved in transcriptional regulation of yeast sulfur amino acid metabolism
-
PID: 9199298, COI: 1:CAS:528:DyaK2sXktFOhu7w%3D
-
Blaiseau PL, Isnard AD, Surdin-Kerjan Y, Thomas D: Met31p and Met32p, two related zinc finger proteins, are involved in transcriptional regulation of yeast sulfur amino acid metabolism. Mol Cell Biol. 1997, 17: 3640-3648. DOI: 10.1128/MCB.17.7.3640
-
(1997)
Mol Cell Biol
, vol.17
, pp. 3640-3648
-
-
Blaiseau, P.L.1
Isnard, A.D.2
Surdin-Kerjan, Y.3
Thomas, D.4
-
39
-
-
0032476584
-
Multiple transcriptional activation complexes tether the yeast activator Met4 to DNA
-
PID: 9799240, COI: 1:CAS:528:DyaK1cXnsVKhtLw%3D
-
Blaiseau PL, Thomas D: Multiple transcriptional activation complexes tether the yeast activator Met4 to DNA. EMBO J. 1998, 17: 6327-6336. 10.1093/emboj/17.21.6327. DOI: 10.1093/emboj/17.21.6327
-
(1998)
EMBO J
, vol.17
, pp. 6327-6336
-
-
Blaiseau, P.L.1
Thomas, D.2
-
40
-
-
0025004155
-
Yeast MIG1 repressor is related to the mammalian early growth response and Wilms' tumour finger proteins
-
PID: 2167835, COI: 1:CAS:528:DyaK3MXhvVGhuw%3D%3D
-
Nehlin JO, Ronne H: Yeast MIG1 repressor is related to the mammalian early growth response and Wilms' tumour finger proteins. EMBO J. 1990, 9: 2891-2898.
-
(1990)
EMBO J
, vol.9
, pp. 2891-2898
-
-
Nehlin, J.O.1
Ronne, H.2
-
41
-
-
0027481943
-
Global regulation of mitochondrial biogenesis in Saccharomyces cerevisiae
-
PID: 8234787, COI: 1:CAS:528:DyaK2cXkvFKnsg%3D%3D
-
de Winde JH, Grivell LA: Global regulation of mitochondrial biogenesis in Saccharomyces cerevisiae. Prog Nucleic Acid Res Mol Biol. 1993, 46: 51-91. DOI: 10.1016/S0079-6603(08)61018-1
-
(1993)
Prog Nucleic Acid Res Mol Biol
, vol.46
, pp. 51-91
-
-
de Winde, J.H.1
Grivell, L.A.2
-
42
-
-
0031810672
-
Yeast carbon catabolite repression
-
PID: 9618445, COI: 1:CAS:528:DyaK1cXkt1OitLY%3D
-
Gancedo JM: Yeast carbon catabolite repression. Microbiol Mol Biol Rev. 1998, 62: 334-361.
-
(1998)
Microbiol Mol Biol Rev
, vol.62
, pp. 334-361
-
-
Gancedo, J.M.1
-
43
-
-
0037080980
-
Acute glucose starvation activates the nuclear localization signal of a stress-specific yeast transcription factor
-
PID: 11782433, COI: 1:CAS:528:DC%2BD38XpsFCisQ%3D%3D
-
Gorner W, Durchschlag E, Wolf J, Brown EL, Ammerer G, Ruis H, Schuller C: Acute glucose starvation activates the nuclear localization signal of a stress-specific yeast transcription factor. EMBO J. 2002, 21: 135-144. 10.1093/emboj/21.1.135. DOI: 10.1093/emboj/21.1.135
-
(2002)
EMBO J
, vol.21
, pp. 135-144
-
-
Gorner, W.1
Durchschlag, E.2
Wolf, J.3
Brown, E.L.4
Ammerer, G.5
Ruis, H.6
Schuller, C.7
-
44
-
-
0035149551
-
Remodeling of yeast genome expression in response to environmental changes
-
PID: 11179418, COI: 1:CAS:528:DC%2BD3MXhtlGjtLg%3D
-
Causton HC, Ren B, Koh SS, Harbison CT, Kanin E, Jennings EG, Lee TI, True HL, Lander ES, Young RA: Remodeling of yeast genome expression in response to environmental changes. Mol Biol Cell. 2001, 12: 323-337. DOI: 10.1091/mbc.12.2.323
-
(2001)
Mol Biol Cell
, vol.12
, pp. 323-337
-
-
Causton, H.C.1
Ren, B.2
Koh, S.S.3
Harbison, C.T.4
Kanin, E.5
Jennings, E.G.6
Lee, T.I.7
True, H.L.8
Lander, E.S.9
Young, R.A.10
-
45
-
-
0025158144
-
Multifunctional DNA-binding proteins mediate concerted transcription activation of yeast ribosomal protein genes
-
PID: 2207166, COI: 1:CAS:528:DyaK3cXls1Kit7g%3D
-
Mager WH, Planta RJ: Multifunctional DNA-binding proteins mediate concerted transcription activation of yeast ribosomal protein genes. Biochim Biophys Acta. 1990, 1050: 351-355. 10.1016/0167-4781(90)90193-6. DOI: 10.1016/0167-4781(90)90193-6
-
(1990)
Biochim Biophys Acta
, vol.1050
, pp. 351-355
-
-
Mager, W.H.1
Planta, R.J.2
-
46
-
-
0026320245
-
Association of RAP1 binding sites with stringent control of ribosomal protein gene transcription in Saccharomyces cerevisiae
-
PID: 2017175, COI: 1:CAS:528:DyaK3MXit1altLs%3D
-
Moehle CM, Hinnebusch AG: Association of RAP1 binding sites with stringent control of ribosomal protein gene transcription in Saccharomyces cerevisiae. Mol Cell Biol. 1991, 11: 2723-2735. DOI: 10.1128/MCB.11.5.2723
-
(1991)
Mol Cell Biol
, vol.11
, pp. 2723-2735
-
-
Moehle, C.M.1
Hinnebusch, A.G.2
-
47
-
-
0034628901
-
Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae
-
PID: 10698627, COI: 1:CAS:528:DC%2BD3cXhsVWnsb8%3D
-
Hughes JD, Estep PW, Tavazoie S, Church GM: Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae. J Mol Biol. 2000, 296: 1205-1214. 10.1006/jmbi.2000.3519. DOI: 10.1006/jmbi.2000.3519
-
(2000)
J Mol Biol
, vol.296
, pp. 1205-1214
-
-
Hughes, J.D.1
Estep, P.W.2
Tavazoie, S.3
Church, G.M.4
-
48
-
-
0035135420
-
Regulatory element detection using correlation with expression
-
PID: 11175784, COI: 1:CAS:528:DC%2BD3MXhtFGktLk%3D
-
Bussemaker HJ, Li H, Siggia ED: Regulatory element detection using correlation with expression. Nat Genet. 2001, 27: 167-171. 10.1038/84792. DOI: 10.1038/84792
-
(2001)
Nat Genet
, vol.27
, pp. 167-171
-
-
Bussemaker, H.J.1
Li, H.2
Siggia, E.D.3
-
49
-
-
0034817393
-
Widespread collaboration of Isw2 and Sin3-Rpd3 chromatin remodeling complexes in transcriptional repression
-
PID: 11533234, COI: 1:CAS:528:DC%2BD3MXmvFGhsL0%3D
-
Fazzio TG, Kooperberg C, Goldmark JP, Neal C, Basom R, Delrow J, Tsukiyama T: Widespread collaboration of Isw2 and Sin3-Rpd3 chromatin remodeling complexes in transcriptional repression. Mol Cell Biol. 2001, 21: 6450-6460. 10.1128/MCB.21.19.6450-6460.2001. DOI: 10.1128/MCB.21.19.6450-6460.2001
-
(2001)
Mol Cell Biol
, vol.21
, pp. 6450-6460
-
-
Fazzio, T.G.1
Kooperberg, C.2
Goldmark, J.P.3
Neal, C.4
Basom, R.5
Delrow, J.6
Tsukiyama, T.7
-
50
-
-
0036649756
-
Genome-wide binding map of the histone deacetylase Rpd3 in yeast
-
PID: 12089521, COI: 1:CAS:528:DC%2BD38XkvVGmtLw%3D
-
Kurdistani SK, Robyr D, Tavazoie S, Grunstein M: Genome-wide binding map of the histone deacetylase Rpd3 in yeast. Nat Genet. 2002, 31: 248-254. 10.1038/ng907. DOI: 10.1038/ng907
-
(2002)
Nat Genet
, vol.31
, pp. 248-254
-
-
Kurdistani, S.K.1
Robyr, D.2
Tavazoie, S.3
Grunstein, M.4
-
51
-
-
0024854493
-
The yeast SWI4 protein contains a motif present in developmental regulators and is part of a complex involved in cell-cycle-dependent transcription
-
PID: 2689885, COI: 1:CAS:528:DyaK3cXkslajurY%3D
-
Andrews BJ, Herskowitz I: The yeast SWI4 protein contains a motif present in developmental regulators and is part of a complex involved in cell-cycle-dependent transcription. Nature. 1989, 342: 830-833. 10.1038/342830a0. DOI: 10.1038/342830a0
-
(1989)
Nature
, vol.342
, pp. 830-833
-
-
Andrews, B.J.1
Herskowitz, I.2
-
52
-
-
0024550203
-
Identification of a DNA binding factor involved in cell-cycle control of the yeast HO gene
-
PID: 2649246, COI: 1:CAS:528:DyaL1MXhvVOhsL8%3D
-
Andrews BJ, Herskowitz I: Identification of a DNA binding factor involved in cell-cycle control of the yeast HO gene. Cell. 1989, 57: 21-29. DOI: 10.1016/0092-8674(89)90168-2
-
(1989)
Cell
, vol.57
, pp. 21-29
-
-
Andrews, B.J.1
Herskowitz, I.2
-
53
-
-
0027501142
-
A role for the transcription factors Mbp1 and Swi4 in progression from G1 to S phase
-
PID: 8372350, COI: 1:CAS:528:DyaK3sXms1equrw%3D
-
Koch C, Moll T, Neuberg M, Ahorn H, Nasmyth K: A role for the transcription factors Mbp1 and Swi4 in progression from G1 to S phase. Science. 1993, 261: 1551-1557. DOI: 10.1126/science.8372350
-
(1993)
Science
, vol.261
, pp. 1551-1557
-
-
Koch, C.1
Moll, T.2
Neuberg, M.3
Ahorn, H.4
Nasmyth, K.5
-
54
-
-
0035945567
-
Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF
-
PID: 11206552, COI: 1:CAS:528:DC%2BD3MXpvVeqsg%3D%3D
-
Iyer VR, Horak CE, Scafe CS, Botstein D, Snyder M, Brown PO: Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF. Nature. 2001, 409: 533-538. 10.1038/35054095. DOI: 10.1038/35054095
-
(2001)
Nature
, vol.409
, pp. 533-538
-
-
Iyer, V.R.1
Horak, C.E.2
Scafe, C.S.3
Botstein, D.4
Snyder, M.5
Brown, P.O.6
-
55
-
-
0031742022
-
Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiaeby microarray hybridization
-
PID: 9843569, COI: 1:CAS:528:DyaK1cXnvFOmt7Y%3D
-
Spellman PT, Sherlock G, Zhang MQ, Iyer VR, Anders K, Eisen MB, Brown PO, Botstein D, Futcher B: Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol Biol Cell. 1998, 9: 3273-3297. DOI: 10.1091/mbc.9.12.3273
-
(1998)
Mol Biol Cell
, vol.9
, pp. 3273-3297
-
-
Spellman, P.T.1
Sherlock, G.2
Zhang, M.Q.3
Iyer, V.R.4
Anders, K.5
Eisen, M.B.6
Brown, P.O.7
Botstein, D.8
Futcher, B.9
-
57
-
-
0029006990
-
Diamide: an oxidant probe for thiols
-
PID: 7651192, COI: 1:CAS:528:DyaK2MXptFOksLw%3D
-
Kosower NS, Kosower EM: Diamide: an oxidant probe for thiols. Methods Enzymol. 1995, 251: 123-133. DOI: 10.1016/0076-6879(95)51116-4
-
(1995)
Methods Enzymol
, vol.251
, pp. 123-133
-
-
Kosower, N.S.1
Kosower, E.M.2
-
58
-
-
0037053377
-
Regulation of protein S-thiolation by glutaredoxin 5 in the yeast Saccharomyces cerevisiae
-
PID: 11882660, COI: 1:CAS:528:DC%2BD38XjslWhtLc%3D
-
Shenton D, Perrone G, Quinn KA, Dawes IW, Grant CM: Regulation of protein S-thiolation by glutaredoxin 5 in the yeast Saccharomyces cerevisiae. J Biol Chem. 2002, 277: 16853-16859. 10.1074/jbc.M200559200. DOI: 10.1074/jbc.M200559200
-
(2002)
J Biol Chem
, vol.277
, pp. 16853-16859
-
-
Shenton, D.1
Perrone, G.2
Quinn, K.A.3
Dawes, I.W.4
Grant, C.M.5
-
59
-
-
0032572582
-
Dislocation of type I membrane proteins from the ER to the cytosol is sensitive to changes in redox potential
-
PID: 9679137, COI: 1:CAS:528:DyaK1cXltFGqsrg%3D
-
Tortorella D, Story CM, Huppa JB, Wiertz EJ, Jones TR, Bacik I, Bennink JR, Yewdell JW, Ploegh HL: Dislocation of type I membrane proteins from the ER to the cytosol is sensitive to changes in redox potential. J Cell Biol. 1998, 142: 365-376. 10.1083/jcb.142.2.365. DOI: 10.1083/jcb.142.2.365
-
(1998)
J Cell Biol
, vol.142
, pp. 365-376
-
-
Tortorella, D.1
Story, C.M.2
Huppa, J.B.3
Wiertz, E.J.4
Jones, T.R.5
Bacik, I.6
Bennink, J.R.7
Yewdell, J.W.8
Ploegh, H.L.9
-
60
-
-
17944362911
-
Zinc and diabetes mellitus: is there a need of zinc supplementation in diabetes mellitus patients?
-
PID: 11575679, COI: 1:CAS:528:DC%2BD3MXnt12hsro%3D
-
Salgueiro MJ, Krebs N, Zubillaga MB, Weill R, Postaire E, Lysionek AE, Caro RA, De Paoli T, Hager A, Boccio J: Zinc and diabetes mellitus: is there a need of zinc supplementation in diabetes mellitus patients?. Biol Trace Elem Res. 2001, 81: 215-228. 10.1385/BTER:81:3:215. DOI: 10.1385/BTER:81:3:215
-
(2001)
Biol Trace Elem Res
, vol.81
, pp. 215-228
-
-
Salgueiro, M.J.1
Krebs, N.2
Zubillaga, M.B.3
Weill, R.4
Postaire, E.5
Lysionek, A.E.6
Caro, R.A.7
De Paoli, T.8
Hager, A.9
Boccio, J.10
-
61
-
-
0029554589
-
Calnexin, calreticulin, and Bip/Kar2p in protein folding
-
PID: 8824414, COI: 1:CAS:528:DyaK28XkvVanu70%3D
-
Hebert DN, Simons JF, Peterson JR, Helenius A: Calnexin, calreticulin, and Bip/Kar2p in protein folding. Cold Spring Harb Symp Quant Biol. 1995, 60: 405-415. DOI: 10.1101/SQB.1995.060.01.045
-
(1995)
Cold Spring Harb Symp Quant Biol
, vol.60
, pp. 405-415
-
-
Hebert, D.N.1
Simons, J.F.2
Peterson, J.R.3
Helenius, A.4
-
62
-
-
0028973422
-
2+binding region in calreticulin
-
PID: 8521965, COI: 1:CAS:528:DyaK2MXpslKiu7s%3D
-
2+ binding region in calreticulin. FEBS Lett. 1995, 376: 53-57. 10.1016/0014-5793(95)01246-4. DOI: 10.1016/0014-5793(95)01246-4
-
(1995)
FEBS Lett
, vol.376
, pp. 53-57
-
-
Baksh, S.1
Spamer, C.2
Heilmann, C.3
Michalak, M.4
-
63
-
-
0030866223
-
Multiple pathways control cell growth and transformation: overlapping and independent activities of p53 and p21Cip1/WAF1/Sdi1
-
PID: 9390024, COI: 1:CAS:528:DyaK2sXnvV2jtrk%3D
-
Cox LS: Multiple pathways control cell growth and transformation: overlapping and independent activities of p53 and p21Cip1/WAF1/Sdi1. J Pathol. 1997, 183: 134-140. 10.1002/(SICI)1096-9896(199710)183:2<134::AID-PATH960>3.0.CO;2-D. DOI: 10.1002/(SICI)1096-9896(199710)183:2<134::AID-PATH960>3.0.CO;2-D
-
(1997)
J Pathol
, vol.183
, pp. 134-140
-
-
Cox, L.S.1
-
64
-
-
0036227226
-
Mucosal and enterocyte IL-6 production during sepsis and endotoxemia - role of transcription factors and regulation by the stress response
-
PID: 11975924, COI: 1:CAS:528:DC%2BD38XivF2rt7o%3D
-
Pritts T, Hungness E, Wang Q, Robb B, Hershko D, Hasselgren PO: Mucosal and enterocyte IL-6 production during sepsis and endotoxemia - role of transcription factors and regulation by the stress response. Am J Surg. 2002, 183: 372-383. 10.1016/S0002-9610(02)00812-7. DOI: 10.1016/S0002-9610(02)00812-7
-
(2002)
Am J Surg
, vol.183
, pp. 372-383
-
-
Pritts, T.1
Hungness, E.2
Wang, Q.3
Robb, B.4
Hershko, D.5
Hasselgren, P.O.6
-
65
-
-
0031457095
-
Metabolism of sulfur amino acids in Saccharomyces cerevisiae
-
PID: 9409150, COI: 1:CAS:528:DyaK2sXotVymsbc%3D
-
Thomas D, Surdin-Kerjan Y: Metabolism of sulfur amino acids in Saccharomyces cerevisiae. Microbiol Mol Biol Rev. 1997, 61: 503-532.
-
(1997)
Microbiol Mol Biol Rev
, vol.61
, pp. 503-532
-
-
Thomas, D.1
Surdin-Kerjan, Y.2
-
66
-
-
85182697878
-
-
Eisen lab
-
Eisen lab. [http://rana.lbl.gov]
-
-
-
-
69
-
-
0034731822
-
A web site for the computational analysis of yeast regulatory sequences
-
PID: 10641039, COI: 1:CAS:528:DC%2BD3cXht1yrsrs%3D
-
van Helden J, Andre B, Collado-Vides J: A web site for the computational analysis of yeast regulatory sequences. Yeast. 2000, 16: 177-187. 10.1002/(SICI)1097-0061(20000130)16:2<177::AID-YEA516>3.0.CO;2-9. DOI: 10.1002/(SICI)1097-0061(20000130)16:2<177::AID-YEA516>3.0.CO;2-9
-
(2000)
Yeast
, vol.16
, pp. 177-187
-
-
van Helden, J.1
Andre, B.2
Collado-Vides, J.3
|