A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization

Genome Research

Volumn 6, Issue 7, 1996, Pages 639-645

  Shalon, Dari ^a,b   Smith, Stephen J ^a   Brown, Patrick O ^a  

^a STANFORD UNIVERSITY   (United States)

^b Synteni Inc   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA FRAGMENT; FLUORESCENT DYE; GLASS;

ARTICLE; CHROMOSOME; CONTROLLED STUDY; DNA DETERMINATION; DNA HYBRIDIZATION; DNA SEQUENCE; GENE EXPRESSION; GENE MAPPING; GENOME; MICROSCOPY; NONHUMAN; PRIORITY JOURNAL; YEAST;

EID: 0029812283     PISSN: 10549803     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.6.7.639     Document Type: Article

References (15)

1. Billings, P.R., C.L. Smith, and C.R. Cantor. 1991. New techniques for physical mapping of the human genome. FASEB J. 5: 28-34.
2. Bohlander, S.K., R. Espinosa III, M.M. LeBeau, J.D. Rowley, and M.O. Diaz. 1992. A method for the rapid sequence-independent amplification of microdissected chromosomal material. Genomics 13: 1322-1324.
3. Chu, G., D. Vollrath, and R. Davis. 1986. Separation of large DNA molecules by contour clamped homogeneous electric fields. Science 234: 1582-1585.
4. Drmanac, R., S. Drmanac, Z. Strezoska, T. Paunesku, I. Labat, M. Zeremski, J. Snoddy, W.K. Funkhouser, B. Koop, L. Hood, et al. 1993. DNA sequence determination by hybridization: A strategy for efficient large-scale sequencing. Science 260: 1649-1652.
5. Grothues, D., C.R. Cantor, and C.L. Smith. 1993. PCR amplification of megabase DNA with tagged random primers (T-PCR). Nucleic Acids Res. 21: 1321-1322.
6. Hudson, T.J., L.D. Stein, S.S. Gerety, J. Ma, A.B. Castle, J. Silva, D.K. Slonim, R. Baptista, L. Kruglyak, S.H. Xu, et al. 1995. An STS-based map of the human genome. Science 270: 1945-1954.
7. Kallioniemi, A., O.P. Kallioniemi, D. Sudar, D. Rutovitz, J.W. Gray, F. Waldman, and D. Pinkel. 1992. Comparative genomic hybridization for molecular cytogenetic analysis of solid tumors. Science 258: 818-821.
8. Maskos, U. and E.M. Southern. 1992. Parallel analysis of oligodeoxyribonucleotide (oligonucleotide) interactions. I. Analysis of factors influencing oligonucleotide duplex formation. Nucleic Acids Res. 20: 1675-1678.
9. Nelson, S.F., J.H. McCusker, M. Sander, Y. Kee, P. Modrich, and P.O. Brown. 1995. Genomic mismatch scanning: A new approach to genetic linkage mapping, Nature Genet. 4:11-17.
10. Pease, A.C., D. Solas, E.J. Sullivan, M.T. Cronin, C.P. Holmes, and S.P. Fodor. 1994. Light-generated oligonucleotide arrays for rapid DNA sequence analysis. Proc. Natl. Acad. Sci. 91: 5022-5026.
11. Riles, L., J.E. Dutchik, A. Baktha, B.K. McCauley, E.C. Thayer, M.P. Leckie, V.V. Braden, J.E. Depke, and M.V. Olson. 1993. Physical maps of the six smallest chromosomes of Saccharomyces cerevisiae at a resolution of 2.6 kilobase pairs. Genetics 134: 81-150.
12. Ross, M.T., J.D. Hoheisel, A.P. Monaco, Z. Larin, G. Zehetner, and H. Lehrach. 1992. High density gridded YAC filters: Their potential as genome mapping tools. In Techniques for the analysis of complex genomes (ed. Rakesh Anand), pp. 137-153. Academic Press, London, UK.
13. Schena, M., D. Shalon, R.W. Davis, and P.O. Brown. 1995. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 270: 467-470.
14. Shalon, D., 1995. "DNA micro arrays: A new tool for genetic analysis. Ph.D. thesis, Stanford University, Stanford, CA.
15. Zehetner, G. and H. Lehrach. 1994. The reference library system - Sharing biological material and experimental data. Nature 367: 489-491.