메뉴 건너뛰기




Volumn 25, Issue 4, 2006, Pages 562-577

Docking studies of agonists and antagonists suggest an activation pathway of the A3 adenosine receptor

Author keywords

7TM receptor; Binding site; G protein coupled receptor; Homology modeling; Nucleoside; Purines

Indexed keywords

ACTIVATION ANALYSIS; COMPLEXATION; CONFORMATIONS; MOLECULAR DYNAMICS; PROTEINS; REACTION KINETICS;

EID: 33750439761     PISSN: 10933263     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmgm.2006.05.004     Document Type: Article
Times cited : (50)

References (53)
  • 1
    • 33644770260 scopus 로고    scopus 로고
    • Adenosine receptors as therapeutic targets
    • Jacobson K.A., and Gao Z.G. Adenosine receptors as therapeutic targets. Nature Rev. Drug Disc. 5 (2006) 247-264
    • (2006) Nature Rev. Drug Disc. , vol.5 , pp. 247-264
    • Jacobson, K.A.1    Gao, Z.G.2
  • 2
    • 0142211261 scopus 로고    scopus 로고
    • 3 adenosine receptor activation in melanoma cells: association between receptor fate and tumor growth inhibition
    • 3 adenosine receptor activation in melanoma cells: association between receptor fate and tumor growth inhibition. J. Biol. Chem. 278 (2003) 42121-42130
    • (2003) J. Biol. Chem. , vol.278 , pp. 42121-42130
    • Madi, L.1    Bar-Yehuda, S.2    Barer, F.3    Ardon, E.4    Ochaion, A.5    Fishman, P.6
  • 4
    • 0347627795 scopus 로고    scopus 로고
    • Adenosine receptor agonist: from basic medicinal chemistry to clinical development
    • Yan L., Burbiel J.C., Maass A., and Müller C.E. Adenosine receptor agonist: from basic medicinal chemistry to clinical development. Expert Opin. Emerg. Drugs 8 (2003) 537-576
    • (2003) Expert Opin. Emerg. Drugs , vol.8 , pp. 537-576
    • Yan, L.1    Burbiel, J.C.2    Maass, A.3    Müller, C.E.4
  • 5
    • 33750516441 scopus 로고    scopus 로고
    • Pharmaceutical R&D Benchmarking Forum, General Metrics, 2001.
  • 7
    • 0034948696 scopus 로고    scopus 로고
    • Structural mimicry in G protein-coupled receptors: implications of the high-resolution structure of rhodopsin for structure-function analysis of rhodopsin-like receptors
    • Ballesteros J.A., Shi L., and Javitch J.A. Structural mimicry in G protein-coupled receptors: implications of the high-resolution structure of rhodopsin for structure-function analysis of rhodopsin-like receptors. Mol. Pharmacol. 60 (2001) 1-19
    • (2001) Mol. Pharmacol. , vol.60 , pp. 1-19
    • Ballesteros, J.A.1    Shi, L.2    Javitch, J.A.3
  • 8
    • 0042165824 scopus 로고    scopus 로고
    • Three-dimensional model for Meta-II rhodopsin, an activated G-protein-coupled receptor
    • Nikiforovich G.V., and Marshall G.R. Three-dimensional model for Meta-II rhodopsin, an activated G-protein-coupled receptor. Biochemistry 42 (2003) 9110-9120
    • (2003) Biochemistry , vol.42 , pp. 9110-9120
    • Nikiforovich, G.V.1    Marshall, G.R.2
  • 10
    • 0035498937 scopus 로고    scopus 로고
    • Receptor activation: what does the rhodopsin structure tell us?
    • Meng E.C., and Bourne H.R. Receptor activation: what does the rhodopsin structure tell us?. Trends Pharmacol. Sci. 22 (2001) 587-593
    • (2001) Trends Pharmacol. Sci. , vol.22 , pp. 587-593
    • Meng, E.C.1    Bourne, H.R.2
  • 15
    • 5044235587 scopus 로고    scopus 로고
    • Electron crystallography reveals the structure of metarhodopsin I
    • Ruprecht J.J., Mielke T., Vogel R., Villa C., and Schertler G.F.X. Electron crystallography reveals the structure of metarhodopsin I. EMBO J. 23 (2004) 3609-3620
    • (2004) EMBO J. , vol.23 , pp. 3609-3620
    • Ruprecht, J.J.1    Mielke, T.2    Vogel, R.3    Villa, C.4    Schertler, G.F.X.5
  • 26
    • 0029756165 scopus 로고    scopus 로고
    • Specific tryptophan UV-absorbance changes are probes of the transition of rhodopsin to its active state
    • Lin S.W., and Sakmar T.P. Specific tryptophan UV-absorbance changes are probes of the transition of rhodopsin to its active state. Biochemistry 35 (1996) 11149-11159
    • (1996) Biochemistry , vol.35 , pp. 11149-11159
    • Lin, S.W.1    Sakmar, T.P.2
  • 31
    • 0038159530 scopus 로고    scopus 로고
    • Organization of the G protein-coupled receptors rhodopsin and opsin in native membranes
    • Liang Y., Fortiadis D., Filipek S., Saperstein D.A., Palczewski K., and Engel A. Organization of the G protein-coupled receptors rhodopsin and opsin in native membranes. J. Biol. Chem. 278 (2003) 21655-21662
    • (2003) J. Biol. Chem. , vol.278 , pp. 21655-21662
    • Liang, Y.1    Fortiadis, D.2    Filipek, S.3    Saperstein, D.A.4    Palczewski, K.5    Engel, A.6
  • 32
    • 28444493656 scopus 로고    scopus 로고
    • Crosstalk in G protein-coupled receptors: changes at the transmembrane homodimer interface determine activation
    • Guo W., Shi L., Filizola M., Weinstein H., and Javitch J. Crosstalk in G protein-coupled receptors: changes at the transmembrane homodimer interface determine activation. Proc. Natl. Acad. Sci. U.S.A. 102 (2005) 17495-17500
    • (2005) Proc. Natl. Acad. Sci. U.S.A. , vol.102 , pp. 17495-17500
    • Guo, W.1    Shi, L.2    Filizola, M.3    Weinstein, H.4    Javitch, J.5
  • 33
    • 0037127315 scopus 로고    scopus 로고
    • 3 muscarinic acetylcholine receptor activation probed by the use of an in situ disulfide cross-linking strategy
    • 3 muscarinic acetylcholine receptor activation probed by the use of an in situ disulfide cross-linking strategy. J. Biol. Chem. 277 (2002) 2247-2257
    • (2002) J. Biol. Chem. , vol.277 , pp. 2247-2257
    • Ward, S.D.C.1    Hamdan, F.F.2    Bloodworth, L.M.3    Wess, J.4
  • 35
    • 0037452868 scopus 로고    scopus 로고
    • Sequence analyses of G-protein-coupled receptors: similarities to rhodopsin
    • Mirzadegan T., Benko G., Filipek S., and Palczewski K. Sequence analyses of G-protein-coupled receptors: similarities to rhodopsin. Biochemistry 42 (2003) 2759-2767
    • (2003) Biochemistry , vol.42 , pp. 2759-2767
    • Mirzadegan, T.1    Benko, G.2    Filipek, S.3    Palczewski, K.4
  • 40
    • 0036950335 scopus 로고    scopus 로고
    • 2 adrenergic receptor
    • 2 adrenergic receptor. J. Pept. Res. 60 (2002) 317-321
    • (2002) J. Pept. Res. , vol.60 , pp. 317-321
    • Kobilka, B.1
  • 41
    • 0032127619 scopus 로고    scopus 로고
    • The exclusive nature of intrinsic efficacy
    • Clarke W.P., and Bond R.S. The exclusive nature of intrinsic efficacy. Trends Pharmacol. Sci. 19 (1998) 270-276
    • (1998) Trends Pharmacol. Sci. , vol.19 , pp. 270-276
    • Clarke, W.P.1    Bond, R.S.2
  • 43
    • 33750522385 scopus 로고    scopus 로고
    • ®, version 7.0, Tripos Inc., 1699 South Hanley Rd., St. Louis, Missouri 63144, USA.
  • 44
    • 0001242234 scopus 로고    scopus 로고
    • MMFF VII. Characterization of MMFF94, MMFF94s, and other widely available force fields for conformational energies and for intermolecular-interaction energies and geometries
    • Halgren T.A. MMFF VII. Characterization of MMFF94, MMFF94s, and other widely available force fields for conformational energies and for intermolecular-interaction energies and geometries. J. Comput. Chem. 20 (1999) 730-748
    • (1999) J. Comput. Chem. , vol.20 , pp. 730-748
    • Halgren, T.A.1
  • 45
    • 0025390935 scopus 로고
    • MOPAC: a semiempirical molecular orbital program
    • Stewart J.J.P. MOPAC: a semiempirical molecular orbital program. J. Comput. Aid. Mol. Des. 4 (1990) 1-105
    • (1990) J. Comput. Aid. Mol. Des. , vol.4 , pp. 1-105
    • Stewart, J.J.P.1
  • 46
    • 0027548454 scopus 로고
    • A fast approach to pharmacophore mapping and its application to dopaminergic and benzodiazepine agonists
    • Martin Y., Burses M., Dahaner E., DeLazzer J., Lico I., and Pavlik P. A fast approach to pharmacophore mapping and its application to dopaminergic and benzodiazepine agonists. J. Comput. Aid. Mol. Des. 7 (1993) 83-102
    • (1993) J. Comput. Aid. Mol. Des. , vol.7 , pp. 83-102
    • Martin, Y.1    Burses, M.2    Dahaner, E.3    DeLazzer, J.4    Lico, I.5    Pavlik, P.6
  • 47
    • 0030599010 scopus 로고    scopus 로고
    • A fast flexible docking method using an incremental construction algorithm
    • Rarey M., Kramer B., Lengauer T., and Klebe G. A fast flexible docking method using an incremental construction algorithm. J. Mol. Biol. 261 (1996) 470-489
    • (1996) J. Mol. Biol. , vol.261 , pp. 470-489
    • Rarey, M.1    Kramer, B.2    Lengauer, T.3    Klebe, G.4
  • 48
    • 0028522365 scopus 로고
    • A fast and efficient method to generate biologically relevant conformations
    • Klebe G., and Mietzner T. A fast and efficient method to generate biologically relevant conformations. J. Comput. Aid. Mol. Des. 8 (1994) 583-606
    • (1994) J. Comput. Aid. Mol. Des. , vol.8 , pp. 583-606
    • Klebe, G.1    Mietzner, T.2
  • 49
    • 33646940952 scopus 로고
    • Numerical integration of the Cartesian equations of motion for a system with constraints: molecular dynamics of n-alkanes
    • Ryckaert J.P., Ciccotti G., and Berendsen H.J.C. Numerical integration of the Cartesian equations of motion for a system with constraints: molecular dynamics of n-alkanes. J. Comput. Phys. 23 (1977) 327-333
    • (1977) J. Comput. Phys. , vol.23 , pp. 327-333
    • Ryckaert, J.P.1    Ciccotti, G.2    Berendsen, H.J.C.3
  • 53
    • 0035865444 scopus 로고    scopus 로고
    • Comparison of the potency of adenosine as an agonist at human adenosine receptors expressed in Chinese hamster ovary cell
    • Fredholm B.B., Irenius E., Kull B., and Schulte G. Comparison of the potency of adenosine as an agonist at human adenosine receptors expressed in Chinese hamster ovary cell. Biochem. Pharmacol. 61 (2001) 443-448
    • (2001) Biochem. Pharmacol. , vol.61 , pp. 443-448
    • Fredholm, B.B.1    Irenius, E.2    Kull, B.3    Schulte, G.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.