-
1
-
-
1842612607
-
Virus entry: Molecular mechanisms and biomedical applications
-
D.S. Dimitrov Virus entry: molecular mechanisms and biomedical applications Nature Rev. Microbiol. 2 2004 109 122
-
(2004)
Nature Rev. Microbiol.
, vol.2
, pp. 109-122
-
-
Dimitrov, D.S.1
-
2
-
-
1842534392
-
How viruses enter animal cells
-
A.E. Smith, and A. Helenius How viruses enter animal cells Science 304 2004 237 242
-
(2004)
Science
, vol.304
, pp. 237-242
-
-
Smith, A.E.1
Helenius, A.2
-
3
-
-
0036719574
-
Antibodies, viruses and vaccines
-
D.R. Burton Antibodies, viruses and vaccines Nature Rev. Immunol. 2 2002 706 713
-
(2002)
Nature Rev. Immunol.
, vol.2
, pp. 706-713
-
-
Burton, D.R.1
-
4
-
-
0036668251
-
Neutralizing antibodies against HIV - Back in the major leagues?
-
F. Ferrantelli, and R.M. Ruprecht Neutralizing antibodies against HIV - back in the major leagues? Curr. Opin. Immunol. 14 2002 495 502
-
(2002)
Curr. Opin. Immunol.
, vol.14
, pp. 495-502
-
-
Ferrantelli, F.1
Ruprecht, R.M.2
-
5
-
-
0345471066
-
Prevention of virus transmission to macaque monkeys by a vaginally applied monoclonal antibody to HIV-1 gp120
-
R.S. Veazey, R.J. Shattock, M. Pope, J.C. Kirijan, J. Jones, and Q. Hu Prevention of virus transmission to macaque monkeys by a vaginally applied monoclonal antibody to HIV-1 gp120 Nature Med. 9 2003 343 346
-
(2003)
Nature Med.
, vol.9
, pp. 343-346
-
-
Veazey, R.S.1
Shattock, R.J.2
Pope, M.3
Kirijan, J.C.4
Jones, J.5
Hu, Q.6
-
6
-
-
0027223565
-
Molecular profile of an antibody response to HIV-1 as probed by combinatorial libraries
-
C.F. Barbas III, T.A. Collet, W. Amberg, P. Roben, J.M. Binley, and D. Hoekstra Molecular profile of an antibody response to HIV-1 as probed by combinatorial libraries J. Mol. Biol. 230 1993 812 823
-
(1993)
J. Mol. Biol.
, vol.230
, pp. 812-823
-
-
Barbas III, C.F.1
Collet, T.A.2
Amberg, W.3
Roben, P.4
Binley, J.M.5
Hoekstra, D.6
-
7
-
-
0025838698
-
A large array of human monoclonal antibodies to type 1 human immunodeficiency virus from combinatorial libraries of asymptomatic seropositive individuals
-
D.R. Burton, C.F. Barbas III, M.A. Persson, S. Koenig, R.M. Chanock, and R.A. Lerner A large array of human monoclonal antibodies to type 1 human immunodeficiency virus from combinatorial libraries of asymptomatic seropositive individuals Proc. Natl Acad. Sci. USA 88 1991 10134 10137
-
(1991)
Proc. Natl Acad. Sci. USA
, vol.88
, pp. 10134-10137
-
-
Burton, D.R.1
Barbas III, C.F.2
Persson, M.A.3
Koenig, S.4
Chanock, R.M.5
Lerner, R.A.6
-
8
-
-
0027985431
-
Efficient neutralization of primary isolates of HIV-1 by a recombinant human monoclonal antibody
-
D.R. Burton, J. Pyati, R. Koduri, S.J. Sharp, G.B. Thornton, and P.W. Parren Efficient neutralization of primary isolates of HIV-1 by a recombinant human monoclonal antibody Science 266 1994 1024 1027
-
(1994)
Science
, vol.266
, pp. 1024-1027
-
-
Burton, D.R.1
Pyati, J.2
Koduri, R.3
Sharp, S.J.4
Thornton, G.B.5
Parren, P.W.6
-
9
-
-
0028291731
-
Recognition properties of a panel of human recombinant Fab fragments to the CD4 binding site of gp120 that show differing abilities to neutralize human immunodeficiency virus type 1
-
P. Roben, J.P. Moore, M. Thali, J. Sodroski, C.F. Barbas III, and D.R. Burton Recognition properties of a panel of human recombinant Fab fragments to the CD4 binding site of gp120 that show differing abilities to neutralize human immunodeficiency virus type 1 J. Virol. 68 1994 4821 4828
-
(1994)
J. Virol.
, vol.68
, pp. 4821-4828
-
-
Roben, P.1
Moore, J.P.2
Thali, M.3
Sodroski, J.4
Barbas III, C.F.5
Burton, D.R.6
-
10
-
-
0038032955
-
Molecular features of the broadly neutralizing immunoglobulin G1 b12 required for recognition of human immunodeficiency virus type 1 gp120
-
M.B. Zwick, P.W. Parren, E.O. Saphire, S. Church, M. Wang, and J.K. Scott Molecular features of the broadly neutralizing immunoglobulin G1 b12 required for recognition of human immunodeficiency virus type 1 gp120 J. Virol. 77 2003 5863 5876
-
(2003)
J. Virol.
, vol.77
, pp. 5863-5876
-
-
Zwick, M.B.1
Parren, P.W.2
Saphire, E.O.3
Church, S.4
Wang, M.5
Scott, J.K.6
-
11
-
-
0037213247
-
Fine mapping of the interaction of neutralizing and nonneutralizing monoclonal antibodies with the CD4 binding site of human immunodeficiency virus type 1 gp120
-
R. Pantophlet, S.E. Ollmann, P. Poignard, P.W. Parren, I.A. Wilson, and D.R. Burton Fine mapping of the interaction of neutralizing and nonneutralizing monoclonal antibodies with the CD4 binding site of human immunodeficiency virus type 1 gp120 J. Virol. 77 2003 642 658
-
(2003)
J. Virol.
, vol.77
, pp. 642-658
-
-
Pantophlet, R.1
Ollmann, S.E.2
Poignard, P.3
Parren, P.W.4
Wilson, I.A.5
Burton, D.R.6
-
12
-
-
0029861453
-
In vitro antigen challenge of human antibody libraries for vaccine evaluation: The human immunodeficiency virus type 1 envelope
-
P.W. Parren, P. Fisicaro, A.F. Labrijn, J.M. Binley, W.P. Yang, and H.J. Ditzel In vitro antigen challenge of human antibody libraries for vaccine evaluation: the human immunodeficiency virus type 1 envelope J. Virol. 70 1996 9046 9050
-
(1996)
J. Virol.
, vol.70
, pp. 9046-9050
-
-
Parren, P.W.1
Fisicaro, P.2
Labrijn, A.F.3
Binley, J.M.4
Yang, W.P.5
Ditzel, H.J.6
-
13
-
-
0025958022
-
Conformational epitope on gp120 important in CD4 binding and human immunodeficiency virus type 1 neutralization identified by a human monoclonal antibody
-
D.D. Ho, J.A. McKeating, X.L. Li, T. Moudgil, E.S. Daar, N.C. Sun, and J.E. Robinson Conformational epitope on gp120 important in CD4 binding and human immunodeficiency virus type 1 neutralization identified by a human monoclonal antibody J. Virol. 65 1991 489 493
-
(1991)
J. Virol.
, vol.65
, pp. 489-493
-
-
Ho, D.D.1
McKeating, J.A.2
Li, X.L.3
Moudgil, T.4
Daar, E.S.5
Sun, N.C.6
Robinson, J.E.7
-
14
-
-
0027454080
-
A potent, neutralizing human monoclonal antibody against a unique epitope overlapping the CD4-binding site of HIV-1 gp120 that is broadly conserved across North American and African virus isolates
-
A. Pinter, W.J. Honnen, M.E. Racho, and S.A. Tilley A potent, neutralizing human monoclonal antibody against a unique epitope overlapping the CD4-binding site of HIV-1 gp120 that is broadly conserved across North American and African virus isolates AIDS Res. Hum. Retroviruses 9 1993 985 996
-
(1993)
AIDS Res. Hum. Retroviruses
, vol.9
, pp. 985-996
-
-
Pinter, A.1
Honnen, W.J.2
Racho, M.E.3
Tilley, S.A.4
-
15
-
-
0026085170
-
Characterization of a discontinuous human immunodeficiency virus type 1 gp120 epitope recognized by a broadly reactive neutralizing human monoclonal antibody
-
M. Thali, U. Olshevsky, C. Furman, D. Gabuzda, M. Posner, and J. Sodroski Characterization of a discontinuous human immunodeficiency virus type 1 gp120 epitope recognized by a broadly reactive neutralizing human monoclonal antibody J. Virol. 65 1991 6188 6193
-
(1991)
J. Virol.
, vol.65
, pp. 6188-6193
-
-
Thali, M.1
Olshevsky, U.2
Furman, C.3
Gabuzda, D.4
Posner, M.5
Sodroski, J.6
-
16
-
-
0030043169
-
Antibody cross-competition analysis of the human immunodeficiency virus type 1 gp120 exterior envelope glycoprotein
-
J.P. Moore, and J. Sodroski Antibody cross-competition analysis of the human immunodeficiency virus type 1 gp120 exterior envelope glycoprotein J. Virol. 70 1996 1863 1872
-
(1996)
J. Virol.
, vol.70
, pp. 1863-1872
-
-
Moore, J.P.1
Sodroski, J.2
-
17
-
-
0025821179
-
A human monoclonal antibody against the CD4-binding site of HIV1 gp120 exhibits potent, broadly neutralizing activity
-
S.A. Tilley, W.J. Honnen, M.E. Racho, M. Hilgartner, and A. Pinter A human monoclonal antibody against the CD4-binding site of HIV1 gp120 exhibits potent, broadly neutralizing activity Res. Virol. 142 1991 247 259
-
(1991)
Res. Virol.
, vol.142
, pp. 247-259
-
-
Tilley, S.A.1
Honnen, W.J.2
Racho, M.E.3
Hilgartner, M.4
Pinter, A.5
-
18
-
-
0026801056
-
Discontinuous, conserved neutralization epitopes overlapping the CD4-binding region of human immunodeficiency virus type 1 gp120 envelope glycoprotein
-
M. Thali, C. Furman, D.D. Ho, J. Robinson, S. Tilley, A. Pinter, and J. Sodroski Discontinuous, conserved neutralization epitopes overlapping the CD4-binding region of human immunodeficiency virus type 1 gp120 envelope glycoprotein J. Virol. 66 1992 5635 5641
-
(1992)
J. Virol.
, vol.66
, pp. 5635-5641
-
-
Thali, M.1
Furman, C.2
Ho, D.D.3
Robinson, J.4
Tilley, S.5
Pinter, A.6
Sodroski, J.7
-
19
-
-
0028234692
-
Synergistic neutralization of human immunodeficiency virus type 1 by combinations of human monoclonal antibodies
-
S. Laal, S. Burda, M.K. Gorny, S. Karwowska, A. Buchbinder, and S. Zolla-Pazner Synergistic neutralization of human immunodeficiency virus type 1 by combinations of human monoclonal antibodies J. Virol. 68 1994 4001 4008
-
(1994)
J. Virol.
, vol.68
, pp. 4001-4008
-
-
Laal, S.1
Burda, S.2
Gorny, M.K.3
Karwowska, S.4
Buchbinder, A.5
Zolla-Pazner, S.6
-
20
-
-
4143088167
-
Identification and characterization of a new cross-reactive human immunodeficiency virus type 1-neutralizing human monoclonal antibody
-
M.Y. Zhang, X. Xiao, I.A. Sidorov, V. Choudhry, F. Cham, and P.F. Zhang Identification and characterization of a new cross-reactive human immunodeficiency virus type 1-neutralizing human monoclonal antibody J. Virol. 78 2004 9233 9242
-
(2004)
J. Virol.
, vol.78
, pp. 9233-9242
-
-
Zhang, M.Y.1
Xiao, X.2
Sidorov, I.A.3
Choudhry, V.4
Cham, F.5
Zhang, P.F.6
-
21
-
-
10744226328
-
Broadly cross-reactive HIV neutralizing human monoclonal antibody Fab selected by sequential antigen panning of a phage display library
-
M.Y. Zhang, Y. Shu, S. Phogat, X. Xiao, F. Cham, and P. Bouma Broadly cross-reactive HIV neutralizing human monoclonal antibody Fab selected by sequential antigen panning of a phage display library J. Immunol. Methods 283 2003 17 25
-
(2003)
J. Immunol. Methods
, vol.283
, pp. 17-25
-
-
Zhang, M.Y.1
Shu, Y.2
Phogat, S.3
Xiao, X.4
Cham, F.5
Bouma, P.6
-
22
-
-
17944380435
-
Crystal structure of a neutralizing human IGG against HIV-1: A template for vaccine design
-
E.O. Saphire, P.W. Parren, R. Pantophlet, M.B. Zwick, G.M. Morris, and P.M. Rudd Crystal structure of a neutralizing human IGG against HIV-1: a template for vaccine design Science 293 2001 1155 1159
-
(2001)
Science
, vol.293
, pp. 1155-1159
-
-
Saphire, E.O.1
Parren, P.W.2
Pantophlet, R.3
Zwick, M.B.4
Morris, G.M.5
Rudd, P.M.6
-
23
-
-
0029091806
-
Neutralization of primary HIV-1 isolates by anti-envelope monoclonal antibodies
-
M.P. D'Souza, G. Milman, J.A. Bradac, D. McPhee, C.V. Hanson, and R.M. Hendry Neutralization of primary HIV-1 isolates by anti-envelope monoclonal antibodies AIDS 9 1995 867 874
-
(1995)
AIDS
, vol.9
, pp. 867-874
-
-
D'Souza, M.P.1
Milman, G.2
Bradac, J.A.3
McPhee, D.4
Hanson, C.V.5
Hendry, R.M.6
-
24
-
-
0030985017
-
Evaluation of monoclonal antibodies to human immunodeficiency virus type 1 primary isolates by neutralization assays: Performance criteria for selecting candidate antibodies for clinical trials. AIDS Clinical Trials Group Antibody Selection Working Group
-
M.P. D'Souza, D. Livnat, J.A. Bradac, and S.H. Bridges Evaluation of monoclonal antibodies to human immunodeficiency virus type 1 primary isolates by neutralization assays: performance criteria for selecting candidate antibodies for clinical trials. AIDS Clinical Trials Group Antibody Selection Working Group J. Infect. Dis. 175 1997 1056 1062
-
(1997)
J. Infect. Dis.
, vol.175
, pp. 1056-1062
-
-
D'Souza, M.P.1
Livnat, D.2
Bradac, J.A.3
Bridges, S.H.4
-
25
-
-
0037069682
-
HIV-1 evades antibody-mediated neutralization through conformational masking of receptor-binding sites
-
P.D. Kwong, M.L. Doyle, D.J. Casper, C. Cicala, S.A. Leavitt, and S. Majeed HIV-1 evades antibody-mediated neutralization through conformational masking of receptor-binding sites Nature 420 2002 678 682
-
(2002)
Nature
, vol.420
, pp. 678-682
-
-
Kwong, P.D.1
Doyle, M.L.2
Casper, D.J.3
Cicala, C.4
Leavitt, S.A.5
Majeed, S.6
-
26
-
-
0032543307
-
Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody
-
P.D. Kwong, R. Wyatt, J. Robinson, R.W. Sweet, J. Sodroski, and W.A. Hendrickson Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody Nature 393 1998 648 659
-
(1998)
Nature
, vol.393
, pp. 648-659
-
-
Kwong, P.D.1
Wyatt, R.2
Robinson, J.3
Sweet, R.W.4
Sodroski, J.5
Hendrickson, W.A.6
-
27
-
-
12144290520
-
Structural basis of tyrosine sulfation and VH-gene usage in antibodies that recognize the HIV type 1 coreceptor-binding site on gp120
-
C.C. Huang, M. Venturi, S. Majeed, M.J. Moore, S. Phogat, and M.Y. Zhang Structural basis of tyrosine sulfation and VH-gene usage in antibodies that recognize the HIV type 1 coreceptor-binding site on gp120 Proc. Natl Acad. Sci. USA 101 2004 2706 2711
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 2706-2711
-
-
Huang, C.C.1
Venturi, M.2
Majeed, S.3
Moore, M.J.4
Phogat, S.5
Zhang, M.Y.6
-
28
-
-
0037076265
-
Broadly cross-reactive HIV-1-neutralizing human monoclonal Fab selected for binding to gp120-CD4-CCR5 complexes
-
M. Moulard, S.K. Phogat, Y. Shu, A.F. Labrijn, X. Xiao, and J.M. Binley Broadly cross-reactive HIV-1-neutralizing human monoclonal Fab selected for binding to gp120-CD4-CCR5 complexes Proc. Natl Acad. Sci. USA 99 2002 6913 6918
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 6913-6918
-
-
Moulard, M.1
Phogat, S.K.2
Shu, Y.3
Labrijn, A.F.4
Xiao, X.5
Binley, J.M.6
-
29
-
-
10744224411
-
Crystal structure of the broadly cross-reactive HIV-1-neutralizing Fab X5 and fine mapping of its epitope
-
R. Darbha, S. Phogat, A.F. Labrijn, Y. Shu, Y. Gu, and M. Andrykovitch Crystal structure of the broadly cross-reactive HIV-1-neutralizing Fab X5 and fine mapping of its epitope Biochemistry 43 2004 1410 1417
-
(2004)
Biochemistry
, vol.43
, pp. 1410-1417
-
-
Darbha, R.1
Phogat, S.2
Labrijn, A.F.3
Shu, Y.4
Gu, Y.5
Andrykovitch, M.6
-
30
-
-
4544379899
-
Structure and mechanistic analysis of the anti-human immunodeficiency virus type 1 antibody 2F5 in complex with its gp41 epitope
-
G. Ofek, M. Tang, A. Sambor, H. Katinger, J.R. Mascola, R. Wyatt, and P.D. Kwong Structure and mechanistic analysis of the anti-human immunodeficiency virus type 1 antibody 2F5 in complex with its gp41 epitope J. Virol. 78 2004 10724 10737
-
(2004)
J. Virol.
, vol.78
, pp. 10724-10737
-
-
Ofek, G.1
Tang, M.2
Sambor, A.3
Katinger, H.4
Mascola, J.R.5
Wyatt, R.6
Kwong, P.D.7
-
31
-
-
12144285761
-
The long third complementarity-determining region of the heavy chain is important in the activity of the broadly neutralizing anti-human immunodeficiency virus type 1 antibody 2F5
-
M.B. Zwick, H.K. Komori, R.L. Stanfield, S. Church, M. Wang, and P.W. Parren The long third complementarity-determining region of the heavy chain is important in the activity of the broadly neutralizing anti-human immunodeficiency virus type 1 antibody 2F5 J. Virol. 78 2004 3155 3161
-
(2004)
J. Virol.
, vol.78
, pp. 3155-3161
-
-
Zwick, M.B.1
Komori, H.K.2
Stanfield, R.L.3
Church, S.4
Wang, M.5
Parren, P.W.6
-
32
-
-
13844255333
-
Broadly neutralizing anti-HIV antibody 4E10 recognizes a helical conformation of a highly conserved fusion-associated motif in gp41
-
R.M. Cardoso, M.B. Zwick, R.L. Stanfield, R. Kunert, J.M. Binley, and H. Katinger Broadly neutralizing anti-HIV antibody 4E10 recognizes a helical conformation of a highly conserved fusion-associated motif in gp41 Immunity 22 2005 163 173
-
(2005)
Immunity
, vol.22
, pp. 163-173
-
-
Cardoso, R.M.1
Zwick, M.B.2
Stanfield, R.L.3
Kunert, R.4
Binley, J.M.5
Katinger, H.6
-
33
-
-
0042855800
-
Tyrosine sulfation of human antibodies contributes to recognition of the CCR5 binding region of HIV-1 gp120
-
H. Choe, W. Li, P.L. Wright, N. Vasilieva, M. Venturi, and C.C. Huang Tyrosine sulfation of human antibodies contributes to recognition of the CCR5 binding region of HIV-1 gp120 Cell 114 2003 161 170
-
(2003)
Cell
, vol.114
, pp. 161-170
-
-
Choe, H.1
Li, W.2
Wright, P.L.3
Vasilieva, N.4
Venturi, M.5
Huang, C.C.6
-
34
-
-
18144426386
-
Functional mimicry of a human immunodeficiency virus type 1 coreceptor by a neutralizing monoclonal antibody
-
S.H. Xiang, M. Farzan, Z. Si, N. Madani, L. Wang, and E. Rosenberg Functional mimicry of a human immunodeficiency virus type 1 coreceptor by a neutralizing monoclonal antibody J. Virol. 79 2005 6068 6077
-
(2005)
J. Virol.
, vol.79
, pp. 6068-6077
-
-
Xiang, S.H.1
Farzan, M.2
Si, Z.3
Madani, N.4
Wang, L.5
Rosenberg, E.6
-
35
-
-
26444600181
-
Structure of the Fab fragment of F105, a broadly reactive anti-human immunodeficiency virus (HIV) antibody that recognizes the CD4 binding site of HIV type 1 gp120
-
R.A. Wilkinson, C. Piscitelli, M. Teintze, L.A. Cavacini, M.R. Posner, and C.M. Lawrence Structure of the Fab fragment of F105, a broadly reactive anti-human immunodeficiency virus (HIV) antibody that recognizes the CD4 binding site of HIV type 1 gp120 J. Virol. 79 2005 13060 13069
-
(2005)
J. Virol.
, vol.79
, pp. 13060-13069
-
-
Wilkinson, R.A.1
Piscitelli, C.2
Teintze, M.3
Cavacini, L.A.4
Posner, M.R.5
Lawrence, C.M.6
-
36
-
-
13844302894
-
Structure of an unliganded simian immunodeficiency virus gp120 core
-
B. Chen, E.M. Vogan, H. Gong, J.J. Skehel, D.C. Wiley, and S.C. Harrison Structure of an unliganded simian immunodeficiency virus gp120 core Nature 433 2005 834 841
-
(2005)
Nature
, vol.433
, pp. 834-841
-
-
Chen, B.1
Vogan, E.M.2
Gong, H.3
Skehel, J.J.4
Wiley, D.C.5
Harrison, S.C.6
-
38
-
-
0024279567
-
One type of gamma-turn, rather than the other gives rise to chain-reversal in proteins
-
E. Milner-White, B.M. Ross, R. Ismail, K. Belhadj-Mostefa, and R. Poet One type of gamma-turn, rather than the other gives rise to chain-reversal in proteins J. Mol. Biol. 204 1988 777 782
-
(1988)
J. Mol. Biol.
, vol.204
, pp. 777-782
-
-
Milner-White, E.1
Ross, B.M.2
Ismail, R.3
Belhadj-Mostefa, K.4
Poet, R.5
-
39
-
-
0034050217
-
The crystal structure of the Fab fragment of a rat monoclonal antibody against the main immunogenic region of the human muscle acetylcholine receptor
-
M. Kontou, D.D. Leonidas, E.H. Vatzaki, P. Tsantili, A. Mamalaki, and N.G. Oikonomakos The crystal structure of the Fab fragment of a rat monoclonal antibody against the main immunogenic region of the human muscle acetylcholine receptor Eur. J. Biochem. 267 2000 2389 2397
-
(2000)
Eur. J. Biochem.
, vol.267
, pp. 2389-2397
-
-
Kontou, M.1
Leonidas, D.D.2
Vatzaki, E.H.3
Tsantili, P.4
Mamalaki, A.5
Oikonomakos, N.G.6
-
40
-
-
0034826222
-
Crystal structure of Fab198, an efficient protector of the acetylcholine receptor against myasthenogenic antibodies
-
K. Poulas, E. Eliopoulos, E. Vatzaki, J. Navaza, M. Kontou, and N. Oikonomakos Crystal structure of Fab198, an efficient protector of the acetylcholine receptor against myasthenogenic antibodies Eur. J. Biochem. 268 2001 3685 3693
-
(2001)
Eur. J. Biochem.
, vol.268
, pp. 3685-3693
-
-
Poulas, K.1
Eliopoulos, E.2
Vatzaki, E.3
Navaza, J.4
Kontou, M.5
Oikonomakos, N.6
-
42
-
-
0020977127
-
Structural basis of antibody function
-
D.R. Davies, and H. Metzger Structural basis of antibody function Annu. Rev. Immunol. 1 1983 87 117
-
(1983)
Annu. Rev. Immunol.
, vol.1
, pp. 87-117
-
-
Davies, D.R.1
Metzger, H.2
-
43
-
-
0018654090
-
Three-dimensional structure of immunoglobulins
-
L.M. Amzel, and R.J. Poljak Three-dimensional structure of immunoglobulins Annu. Rev. Biochem. 48 1979 961 997
-
(1979)
Annu. Rev. Biochem.
, vol.48
, pp. 961-997
-
-
Amzel, L.M.1
Poljak, R.J.2
-
44
-
-
0021100468
-
Molecular anatomy of the antibody binding site
-
J. Novotny, R. Bruccoleri, J. Newell, D. Murphy, E. Haber, and M. Karplus Molecular anatomy of the antibody binding site J. Biol. Chem. 258 1983 14433 14437
-
(1983)
J. Biol. Chem.
, vol.258
, pp. 14433-14437
-
-
Novotny, J.1
Bruccoleri, R.2
Newell, J.3
Murphy, D.4
Haber, E.5
Karplus, M.6
-
45
-
-
14844339334
-
Domain interactions in the Fab fragment: A comparative evaluation of the single-chain Fv and Fab format engineered with variable domains of different stability
-
D. Rothlisberger, A. Honegger, and A. Pluckthun Domain interactions in the Fab fragment: a comparative evaluation of the single-chain Fv and Fab format engineered with variable domains of different stability J. Mol. Biol. 347 2005 773 789
-
(2005)
J. Mol. Biol.
, vol.347
, pp. 773-789
-
-
Rothlisberger, D.1
Honegger, A.2
Pluckthun, A.3
-
46
-
-
0038306259
-
An improved model of association for VH-VL immunoglobulin domains: Asymmetries between VH and VL in the packing of some interface residues
-
E. Vargas-Madrazo, and E. Paz-Garcia An improved model of association for VH-VL immunoglobulin domains: asymmetries between VH and VL in the packing of some interface residues J. Mol. Recogn. 16 2003 113 120
-
(2003)
J. Mol. Recogn.
, vol.16
, pp. 113-120
-
-
Vargas-Madrazo, E.1
Paz-Garcia, E.2
-
47
-
-
0022339938
-
Domain association in immunoglobulin molecules. the packing of variable domains
-
C. Chothia, J. Novotny, R. Bruccoleri, and M. Karplus Domain association in immunoglobulin molecules. The packing of variable domains J. Mol. Biol. 186 1985 651 663
-
(1985)
J. Mol. Biol.
, vol.186
, pp. 651-663
-
-
Chothia, C.1
Novotny, J.2
Bruccoleri, R.3
Karplus, M.4
-
48
-
-
0030047926
-
Refined structure of the monoclonal antibody HyHEL-5 with its antigen hen egg-white lysozyme
-
G.H. Cohen, S. Sheriff, and D.R. Davies Refined structure of the monoclonal antibody HyHEL-5 with its antigen hen egg-white lysozyme Acta Crystallog. sect. D 52 1996 315 326
-
(1996)
Acta Crystallog. Sect. D
, vol.52
, pp. 315-326
-
-
Cohen, G.H.1
Sheriff, S.2
Davies, D.R.3
-
49
-
-
22844444097
-
Water molecules in the antibody-antigen interface of the structure of the Fab HyHEL-5-lysozyme complex at 1.7 Å resolution: Comparison with results from isothermal titration calorimetry
-
G.H. Cohen, E.W. Silverton, E.A. Padlan, F. Dyda, J.A. Wibbenmeyer, R.C. Willson, and D.R. Davies Water molecules in the antibody-antigen interface of the structure of the Fab HyHEL-5-lysozyme complex at 1.7 Å resolution: comparison with results from isothermal titration calorimetry Acta Crystallog. sect. D 61 2005 628 633
-
(2005)
Acta Crystallog. Sect. D
, vol.61
, pp. 628-633
-
-
Cohen, G.H.1
Silverton, E.W.2
Padlan, E.A.3
Dyda, F.4
Wibbenmeyer, J.A.5
Willson, R.C.6
Davies, D.R.7
-
50
-
-
4544339404
-
Structure of an anti-DNA fab complexed with a non-DNA ligand provides insights into cross-reactivity and molecular mimicry
-
J.P. Schuermann, M.T. Henzl, S.L. Deutscher, and J.J. Tanner Structure of an anti-DNA fab complexed with a non-DNA ligand provides insights into cross-reactivity and molecular mimicry Proteins: Struct. Funct. Genet. 57 2004 269 278
-
(2004)
Proteins: Struct. Funct. Genet.
, vol.57
, pp. 269-278
-
-
Schuermann, J.P.1
Henzl, M.T.2
Deutscher, S.L.3
Tanner, J.J.4
-
51
-
-
0027049523
-
Three-dimensional structure of the Fab fragment of a neutralizing antibody to human rhinovirus serotype 2
-
J. Tormo, E. Stadler, T. Skern, H. Auer, O. Kanzler, and C. Betzel Three-dimensional structure of the Fab fragment of a neutralizing antibody to human rhinovirus serotype 2 Protein Sci. 1 1992 1154 1161
-
(1992)
Protein Sci.
, vol.1
, pp. 1154-1161
-
-
Tormo, J.1
Stadler, E.2
Skern, T.3
Auer, H.4
Kanzler, O.5
Betzel, C.6
-
52
-
-
0031558798
-
Standard conformations for the canonical structures of immunoglobulins
-
B. Al-Lazikani, A.M. Lesk, and C. Chothia Standard conformations for the canonical structures of immunoglobulins J. Mol. Biol. 273 1997 927 948
-
(1997)
J. Mol. Biol.
, vol.273
, pp. 927-948
-
-
Al-Lazikani, B.1
Lesk, A.M.2
Chothia, C.3
-
53
-
-
4244141904
-
Sequences of Proteins of Immunological Interest
-
US Department of Health and Human Services.
-
Kabat, E. A., Wu, T. T., Perry, H. M., Gottesmann, K. S. & Foeller, C. (1991). Sequences of Proteins of Immunological Interest. NIH Publication no. 91-3242, US Department of Health and Human Services.
-
(1991)
NIH Publication No. 91-3242
-
-
Kabat, E.A.1
Wu, T.T.2
Perry, H.M.3
Gottesmann, K.S.4
Foeller, C.5
-
54
-
-
0029159770
-
The structural repertoire of the human V kappa domain
-
I.M. Tomlinson, J.P. Cox, E. Gherardi, A.M. Lesk, and C. Chothia The structural repertoire of the human V kappa domain EMBO J. 14 1995 4628 4638
-
(1995)
EMBO J.
, vol.14
, pp. 4628-4638
-
-
Tomlinson, I.M.1
Cox, J.P.2
Gherardi, E.3
Lesk, A.M.4
Chothia, C.5
-
55
-
-
13444312023
-
IMGT, the international ImMunoGeneTics information system
-
M.P. Lefranc, V. Giudicelli, Q. Kaas, E. Duprat, J. Jabado-Michaloud, and D. Scaviner IMGT, the international ImMunoGeneTics information system Nucl. Acids Res. 33 2005 D593 D597
-
(2005)
Nucl. Acids Res.
, vol.33
-
-
Lefranc, M.P.1
Giudicelli, V.2
Kaas, Q.3
Duprat, E.4
Jabado-Michaloud, J.5
Scaviner, D.6
-
56
-
-
13444306641
-
NCBI Reference Sequence (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
-
K.D. Pruitt, T. Tatusova, and D.R. Maglott NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins Nucl. Acids Res. 33 2005 D501 D504
-
(2005)
Nucl. Acids Res.
, vol.33
-
-
Pruitt, K.D.1
Tatusova, T.2
Maglott, D.R.3
-
57
-
-
0034426867
-
Antibody modeling: Implications for engineering and design
-
V. Morea, A.M. Lesk, and A. Tramontano Antibody modeling: implications for engineering and design Methods 20 2000 267 279
-
(2000)
Methods
, vol.20
, pp. 267-279
-
-
Morea, V.1
Lesk, A.M.2
Tramontano, A.3
-
58
-
-
0032536197
-
Conformations of the third hypervariable region in the VH domain of immunoglobulins
-
V. Morea, A. Tramontano, M. Rustici, C. Chothia, and A.M. Lesk Conformations of the third hypervariable region in the VH domain of immunoglobulins J. Mol. Biol. 275 1998 269 294
-
(1998)
J. Mol. Biol.
, vol.275
, pp. 269-294
-
-
Morea, V.1
Tramontano, A.2
Rustici, M.3
Chothia, C.4
Lesk, A.M.5
-
59
-
-
0035920123
-
A role of the third complementarity-determining region in the affinity maturation of an antibody
-
K. Furukawa, H. Shirai, T. Azuma, and H. Nakamura A role of the third complementarity-determining region in the affinity maturation of an antibody J. Biol. Chem. 276 2001 27622 27628
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 27622-27628
-
-
Furukawa, K.1
Shirai, H.2
Azuma, T.3
Nakamura, H.4
-
60
-
-
0030577371
-
Structural classification of CDR-H3 in antibodies
-
H. Shirai, A. Kidera, and H. Nakamura Structural classification of CDR-H3 in antibodies FEBS Letters 399 1996 1 8
-
(1996)
FEBS Letters
, vol.399
, pp. 1-8
-
-
Shirai, H.1
Kidera, A.2
Nakamura, H.3
-
61
-
-
0033058759
-
H3-rules: Identification of CDR-H3 structures in antibodies
-
H. Shirai, A. Kidera, and H. Nakamura H3-rules: identification of CDR-H3 structures in antibodies FEBS Letters 455 1999 188 197
-
(1999)
FEBS Letters
, vol.455
, pp. 188-197
-
-
Shirai, H.1
Kidera, A.2
Nakamura, H.3
-
62
-
-
0025198478
-
Atomic structure of a fragment of human CD4 containing two immunoglobulin-like domains
-
J.H. Wang, Y.W. Yan, T.P. Garrett, J.H. Liu, D.W. Rodgers, and R.L. Garlick Atomic structure of a fragment of human CD4 containing two immunoglobulin-like domains Nature 348 1990 411 418
-
(1990)
Nature
, vol.348
, pp. 411-418
-
-
Wang, J.H.1
Yan, Y.W.2
Garrett, T.P.3
Liu, J.H.4
Rodgers, D.W.5
Garlick, R.L.6
-
63
-
-
1442349113
-
Prediction of alpha-turns in proteins using PSI-BLAST profiles and secondary structure information
-
H. Kaur, and G.P. Raghava Prediction of alpha-turns in proteins using PSI-BLAST profiles and secondary structure information Proteins: Struct. Funct. Genet. 55 2004 83 90
-
(2004)
Proteins: Struct. Funct. Genet.
, vol.55
, pp. 83-90
-
-
Kaur, H.1
Raghava, G.P.2
-
64
-
-
0030580057
-
Antibody-antigen interactions: Contact analysis and binding site topography
-
R.M. MacCallum, A.C. Martin, and J.M. Thornton Antibody-antigen interactions: contact analysis and binding site topography J. Mol. Biol. 262 1996 732 745
-
(1996)
J. Mol. Biol.
, vol.262
, pp. 732-745
-
-
MacCallum, R.M.1
Martin, A.C.2
Thornton, J.M.3
-
65
-
-
21044438453
-
Scorpion-toxin mimics of CD4 in complex with human immunodeficiency virus gp120 crystal structures, molecular mimicry, and neutralization breadth
-
C.C. Huang, F. Stricher, L. Martin, J.M. Decker, S. Majeed, and P. Barthe Scorpion-toxin mimics of CD4 in complex with human immunodeficiency virus gp120 crystal structures, molecular mimicry, and neutralization breadth Structure (Camb) 13 2005 755 768
-
(2005)
Structure (Camb)
, vol.13
, pp. 755-768
-
-
Huang, C.C.1
Stricher, F.2
Martin, L.3
Decker, J.M.4
Majeed, S.5
Barthe, P.6
-
66
-
-
13244262600
-
Assessing predictions of protein-protein interaction: The CAPRI experiment
-
J. Janin Assessing predictions of protein-protein interaction: the CAPRI experiment Protein Sci. 14 2005 278 283
-
(2005)
Protein Sci.
, vol.14
, pp. 278-283
-
-
Janin, J.1
-
67
-
-
15344338993
-
Incorporating intermolecular distance into protein-protein docking
-
H. Lei, and Y. Duan Incorporating intermolecular distance into protein-protein docking Protein Eng. Des. Sel. 17 2004 837 845
-
(2004)
Protein Eng. Des. Sel.
, vol.17
, pp. 837-845
-
-
Lei, H.1
Duan, Y.2
-
69
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Z. Otwinowski, and W. Minor Processing of X-ray diffraction data collected in oscillation mode Macromol. Crystallog. 276 1997 307 326
-
(1997)
Macromol. Crystallog.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
70
-
-
0035788101
-
Implementation of molecular replacement in AMoRe
-
J. Navaza Implementation of molecular replacement in AMoRe Acta Crystallog. sect. D 7 2001 1367 1372
-
(2001)
Acta Crystallog. Sect. D
, vol.7
, pp. 1367-1372
-
-
Navaza, J.1
-
72
-
-
0034547915
-
Three-dimensional structure of the Fab from a human IgM cold agglutinin
-
A. Cauerhff, B.C. Braden, J.G. Carvalho, R. Aparicio, I. Polikarpov, J. Leoni, and F.A. Goldbaum Three-dimensional structure of the Fab from a human IgM cold agglutinin J. Immunol. 165 2000 6422 6428
-
(2000)
J. Immunol.
, vol.165
, pp. 6422-6428
-
-
Cauerhff, A.1
Braden, B.C.2
Carvalho, J.G.3
Aparicio, R.4
Polikarpov, I.5
Leoni, J.6
Goldbaum, F.A.7
-
73
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
T.A. Jones, J.Y. Zou, S.W. Cowan, and M. Kjeldgaard Improved methods for building protein models in electron density maps and the location of errors in these models Acta Crystallog. sect. A 47 1991 110 119
-
(1991)
Acta Crystallog. Sect. a
, vol.47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.Y.2
Cowan, S.W.3
Kjeldgaard, M.4
-
74
-
-
0031569392
-
New applications of simulated annealing in X-ray crystallography and solution NMR
-
A.T. Brunger, P.D. Adams, and L.M. Rice New applications of simulated annealing in X-ray crystallography and solution NMR Structure 5 1997 325 336
-
(1997)
Structure
, vol.5
, pp. 325-336
-
-
Brunger, A.T.1
Adams, P.D.2
Rice, L.M.3
-
76
-
-
0025398721
-
WHAT IF: A molecular modeling and drug design program
-
G. Vriend WHAT IF: a molecular modeling and drug design program J. Mol. Graph. 8 52-6 1990 29
-
(1990)
J. Mol. Graph.
, vol.8
, Issue.6-52
, pp. 29
-
-
Vriend, G.1
-
77
-
-
21644440105
-
Protein-protein docking using 3D-Dock in rounds 3, 4, and 5 of CAPRI
-
P. Carter, V.I. Lesk, S.A. Islam, and M.J. Sternberg Protein-protein docking using 3D-Dock in rounds 3, 4, and 5 of CAPRI Proteins: Struct. Funct. Genet. 60 2005 281 288
-
(2005)
Proteins: Struct. Funct. Genet.
, vol.60
, pp. 281-288
-
-
Carter, P.1
Lesk, V.I.2
Islam, S.A.3
Sternberg, M.J.4
-
78
-
-
0030729838
-
An extensively modified version of MolScript that includes greatly enhanced coloring capabilities
-
R.M. Esnouf An extensively modified version of MolScript that includes greatly enhanced coloring capabilities J. Mol. Graph. Modelling 15 1997 132 134
-
(1997)
J. Mol. Graph. Modelling
, vol.15
, pp. 132-134
-
-
Esnouf, R.M.1
|