Temperature-programmed assembly of DNA: Au nanoparticle bioconjugates

Nano Letters

Volumn 6, Issue 1, 2006, Pages 16-23

  Dillenback, Lisa M ^a   Goodrich, Glenn P ^a,b   Keating, Christine D ^a  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

^b Nanospectra Biosciences   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AU NANOPARTICLE BIOCONJUGATES; DUPLEXES; TEMPERATURE-PROGRAMMED ASSEMBLY; THIOLATED DNA;

ELEMENTARY PARTICLES; GOLD; NANOSTRUCTURED MATERIALS; SYNTHESIS (CHEMICAL); THERMAL EFFECTS; THERMODYNAMIC STABILITY;

DNA;

COMPLEMENTARY DNA; DNA; GOLD; NANOMATERIAL; OLIGONUCLEOTIDE; THIOL DERIVATIVE;

AGAR GEL ELECTROPHORESIS; ARTICLE; BASE PAIRING; CHEMISTRY; TEMPERATURE; THERMODYNAMICS;

BASE PAIRING; DNA; DNA, COMPLEMENTARY; ELECTROPHORESIS, AGAR GEL; GOLD; NANOSTRUCTURES; OLIGONUCLEOTIDES; SULFHYDRYL COMPOUNDS; TEMPERATURE; THERMODYNAMICS;

EID: 31544449484     PISSN: 15306984     EISSN: None     Source Type: Journal    
DOI: 10.1021/nl0508873     Document Type: Article

References (69)

1. (a) Metal Nanoparticles: Synthesis, Characterization, and Applications; Feldheim, D. L., Foss, C. A., Jr., Eds; Marcel Dekker: New York, 2002.
2. (b) Nanobiotechnology: Concepts, Applications, and Perspectives; Niemeyer, C. M., Mirkin, C. A., Eds.; Wiley-VCH: Weinheim, Germany, 2004.
3. Ginger, D. S.; Zhang, H.; Mirkin, C. A. Angew. Chem., Int. Ed. 2004, 43, 30-45.
4. Yin, Y.; Lu, Y.; Gates, B.; Xia, Y. J. Am. Chem. Soc. 2001, 123, 8718-8729.
5. Cui, Y.; Bjork, M. T.; Liddle, J. A.; Sonnichsen, C.; Boussert, B.; Alivisatos, A. P. Nano Lett. 2004, 4, 1093-1098.
6. (a) Kovtyukhova, N. I.; Mallouk, T. E. Chem.-Eur. J. 2002, 8, 4354-4363.
7. (b) Kovtyukhova, N. I.; Martin, B. R.; Mbindyo, J. K. N.; Smith, P. A.; Razavi, B.; Mayer, T. S.; Mallouk, T. E. J. Phys. Chem. B 2001, 105, 8762-8769.
8. Huang, Y.; Duan, X.; Cui, Y.; Lauhon, L. J.; Kim, K.; Lieber, C. M. Science 2001, 294, 1313-1317.
9. Wu, Y.; Yan, H.; Huang, M.; Messer, B.; Song, J. H.; Yang, P. Chem-Eur. J. 2002, 8, 1260-1268.
10. Xia, Y.; Yang, P.; Sun, Y.; Wu, Y.; Mayers, B.; Gates, B.; Yin, Y.; Kim, F.; Yan, H. Adv. Mater. 2003, 15, 353-389.
11. Genov, D. A.; Sarychev, A. K.; Shalaev, V. M.; Wei, A. Nano Lett. 2004, 4, 153-158.
12. Wang, W.; Gu, B.; Hang, L.; Hamilton, W. J. Phys. Chem. B 2003, 107, 3400-3404.
13. (a) Kim, F.; Kwan, S.; Akana, J.; Yang, P. J. Am. Chem. Soc. 2001, 123, 4360.
14. (b) Kim, B.; Tripp, S. L.; Wei, A. J. Am. Chem. Soc. 2001, 123, 7955-7956.
15. (a) Whang, D.; Jin, S.; Lieber, C. M. Nano Lett. 2003, 3, 951-954.
16. (b) Whang, D.; Jin, S.; Wu, Y.; Lieber, C. M. Nano Lett. 2003, 3, 1255-1259.
17. Ryan, D.; Nagle, L.; Rensmo, H.; Fitzmaurice, D. J. Phys. Chem. B 2002, 106, 5371-5377.
18. Smith, P. A.; Nordquist, C. D.; Jackson, T. N.; Mayer, T. S.; Martin, B. R.; Mbindyo, J.; Mallouk, T. E. Appl. Phys. Lett. 2000, 77, 1399-1401.
19. Hermanson, K. D.; Lumsdon, S. O.; Williams, J. P.; Kaler, E. W.; Velev, O. D. Science 2001, 294, 1082-1086.
20. Chung, S.-W.; Ginger, D. S.; Morales, M. W.; Zhang, Z.; Chandrasekhar, V.; Ratner, M. A.; Mirkin, C. A. Small 2005, 1, 64-69.
21. (a) Niemeyer, C. M. Angew. Chem., Int. Ed. 2001, 40, 4128-4158.
22. (b) Ryadnov, M. G.; Ceyhan, B.; Niemeyer, C. M.; Woolfson, D. N. J. Am. Chem. Soc. 2003, 125, 9388-9394.
23. Mann, S.; Shenton, W.; Li, M.; Connolly, S.; Fitzmaurice, D. Adv. Mater. 2000, 12, 147-150.
24. Stevens, M. M.; Flynn, N. T.; Wang, C.; Tirrell, D. A.; Langer, R. Adv. Mater. 2004, 16, 915-918.
25. Caswell, K. K.; Wilson, J. N.; Bunz, U. H. F.; Murphy, C. J. J. Am. Chem. Soc. 2003, 125, 13914-13915.
26. Wang, Y.; Tang, Z.; Tan, S.; Kotov, N. A. Nano Lett. 2005, 5, 243-248.
27. Wang, J. Small 2005, 1, 1036-1043.
28. Mirkin, C. A.; Letsinger, R. L.; Mucic, R. C.; Storhoff, J. J. Nature 1996, 382, 607-609.
29. Alivisatos, A. P.; Johnsson, K. P.; Peng, X.; Wilson, T. E.; Loweth, C. J.; Bruchez, M. P.; Schultz, P. G. Nature 1996, 382, 609-611.
30. Mucic, R. C.; Storhoff, J. J.; Mirkin, C. A.; Letsinger, R. L. J. Am. Chem. Soc. 1998, 120, 12674-12675.
31. Le, J. D.; Pinto, Y.; Seeman, N. C.; Musier-Forsyth, K.; Taton, T. A.; Kiehl, R. A. Nano. Lett. 2004, 4, 2343-2347.
32. (a) Loweth, C. L.; Caldwell, W. B.; Peng, X.; Alivisatos, A. P.; Schultz, P. G. Angew. Chem., Int. Ed. 1999, 38, 1808-1812.
33. (b) Zanchet, D.; Micheel, C. M.; Parak, W. J.; Gerion, D.; Williams, S. C.; Alivisatos, A. P. J. Phys. Chem. B 2002, 106, 11758-11763.
34. (a) Mbindyo, J. K. N.; Reiss, B. D.; Martin, B. R.; Keating, C. D.; Natan, M. J.; Mallouk, T. E. Adv. Mater. 2001, 13, 249-254.
35. (b) Goodrich, G. P.; Helfrich, M. R. Overberg, J. J.; Keating, C. D. Langmuir 2004, 20, 10246-10251.
36. (a) Mirkin, C. A. Inorg. Chem. 2000, 39, 2258-2272.
37. (b) Storhoff, J. J.; Mirkin, C. A. Chem. Rev. 1999, 99, 1849-1862.
38. Seeman, N. C. Acc. Chem. Res. 1997, 30, 357-363.
39. (a) Niemeyer, C. M.; Ceyhan, B.; Hazarike, P. Angew. Chem., Int. Ed. 2003, 42, 5766-5770.
40. (b) Niemeyer, C. M.; Ceyhan, B.; Noyong, M.; Simon, U. Biochem. Biophys. Res. Commun. 2003, 311, 995-999.
41. (a) Hamad-Schifferli, K.; Schwartz, J. J.; Santos, A. T.; Zhang, S.; Jacobson, J. M. Nature 2002, 415, 152-155.
42. (b) Keren, K.; Berman, R. S.; Buchstab, E.; Sivan, U.; Braun, E. Science 2003, 302, 1380-1382.
43. Ongaro, A.; Griffin, F.; Nagle, L.; Iacopino, D.; Eritja, R.; Fitzmaurice, D. Adv. Mater. 2004, 16, 1799-1803
44. (a) Reichert, J.; Csaki, A.; Kohler, J. M.; Fritzsche, W. Anal. Chem. 2000, 72, 6025-6029.
45. (b) He, L.; Musick, M. D.; Nicewarner, S. R.; Salinas, F. G.; Benkovic, S. J.; Natan, M. J.; Keating, C. D. J. Am. Chem. Soc. 2000, 122, 9071-9077.
46. (c) Taton, T. A.; Mirkin, C. A.; Letsinger, R. L. Science 2000, 289, 1757-1760.
47. (d) Cao, Y. C.; Jin, R.; Mirkin, C. A. Science 2002, 297, 1536-1540.
48. Li, M.; Mann, S. J. Mater. Chem. 2004, 14, 2260-2263.
49. Deng, Z.; Mao, C. Nano. Lett. 2003, 3, 1545-1548.
50. Kannan, B.; Kulkami, R. P.; Majumdar, A. Nano Lett. 2004, 4, 1521-1524.
51. Li, Z.; Mirkin, C. A. J. Am. Chem. Soc. 2005, 127, 11568-11596.
52. Claridge, S. A.; Goh, S. L.; Frechet, J. M. J.; Williams, S. C.; Micheel, C. M.; Alivisatos, A. P. Chem. Mater. 2005, 17, 1628-1635.
53. Sadasivan, S.; Dujardin, E.; Li, M.; Johnson, C. J.; Mann, S. Small 2005, 1, 103-106.
54. Deng, Z.; Tian, Y.; Lee, S.-H.; Ribbe, A. E.; Mao, C. Angew. Chem., Int. Ed. 2005, 44, 3582-3585.
55. Pena, S. R. N.; Raina, S.; Goodrich, G. P.; Fedoroff, N. V.; Keating, C. D. J. Am. Chem. Soc. 2002, 124, 7314-7323.
56. Bloomfield, V. A.; Crothers, D. M.; Tinoco, I., Jr. Nucleic Acids: Structures, Properties and Functions; University Science Books: Sausalito, CA, 2000.
57. Elghanian, R.; Storhoff, J. J.; Mucic, R. C.; Letsinger, R. L.; Mirkin, C. A. Science 1997, 277, 1078-1081.
58. Mucic, R. C.; Storhoff, J. J.; Mirkin, C. A.; Letsinger, R. L. J. Am. Chem. Soc. 1998, 120, 12674-12675.
59. Jin, R.; Wu, G.; Li, Z.; Mirkin, C. A.; Schatz, G. A. J. Am. Chem. Soc. 2003, 125, 1643-1654.
60. Zanchet, D.; Micheel, C. M.; Parak, W. J.; Gerion, D.; Williams, S. C.; Alivisatos, A. P. J. Phys. Chem. B 2002, 106, 11758-11763.
61. Zanchet, D.; Micheel, C. M.; Parak, W. J.; Gerion, D.; Alivisatos, A. P. Nano Lett. 2001, 1, 32-35.
62. Sandström, P.; Åkerman, B. Langmuir 2004, 20, 4182-4186.
63. Demers, L. M.; Mirkin, C. A.; Mucic, R. C.; Reynolds, R. A., III; Letsinger, R. L.; Elghanian, R.; Viswanadham, G. Anal. Chem. 2000, 72, 5535-5541.
64. Parak, W. J.; Pellegrino, T.; Micheel, C. M.; Gerion, D.; Williams, S. C.; Alivisatos, A. P. Nano Lett. 2003, 3, 33-36.
65. Note that two fluorescent strands bound in the room-temperature control experiment may be the result of exchange or may simply be due to nonspecific adsorption. In the latter case, actual exchange would be lower (10%).
66. Andreadis, J. D.; Chrisey, L. A. Nucleic Acids Res. 2000, 28, e5i-e5viii.
67. 9′ added, showed complete assembly of the particles in solution to the aggregate.
68. 45
69. Rosi, N. L.; Mirkin, C. M. Chem. Rev. 2005, 105, 1547-1562.