-
3
-
-
0028126829
-
The phylogeny of the genus Clostridium: Proposal of five new genera and eleven new species combinations
-
N.D. Collins, P.A. Lawson, A. Willems, J.J. Cordoba, J. Fernandez-Garayzabal, P. Garcia, J. Cai, H. Hippe, and J.A.E. Farrow The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations Int. J. Syst. Bacteriol. 44 1994 812 826
-
(1994)
Int. J. Syst. Bacteriol.
, vol.44
, pp. 812-826
-
-
Collins, N.D.1
Lawson, P.A.2
Willems, A.3
Cordoba, J.J.4
Fernandez-Garayzabal, J.5
Garcia, P.6
Cai, J.7
Hippe, H.8
Farrow, J.A.E.9
-
4
-
-
0004431865
-
A comparative study of six different strains of the organism commonly concerned in large-scale production of butyl alcohol and acetone by the biological process
-
E.R. Weyer, and L.F. Rettger A comparative study of six different strains of the organism commonly concerned in large-scale production of butyl alcohol and acetone by the biological process J. Bacteriol. 14 1927 399 424
-
(1927)
J. Bacteriol.
, vol.14
, pp. 399-424
-
-
Weyer, E.R.1
Rettger, L.F.2
-
5
-
-
0029811427
-
Chaim Weizmann: From fermentation chemist to president of Israel
-
B. Dixon Chaim Weizmann: from fermentation chemist to president of Israel Anaerobe 2 1996 195 196
-
(1996)
Anaerobe
, vol.2
, pp. 195-196
-
-
Dixon, B.1
-
6
-
-
0029987804
-
Solvent forming genes in Clostridia
-
E. Cornillot, and P. Soucaille Solvent forming genes in Clostridia Nature 380 1996 489
-
(1996)
Nature
, vol.380
, pp. 489
-
-
Cornillot, E.1
Soucaille, P.2
-
7
-
-
0030922888
-
The genes for butanol and acetone formation in Clostridium acetobutylicum ATCC 824 reside on a large plasmid whose loss leads to degenaration of the strain
-
E. Cornillot, R.V. Nair, E.T. Papoutsakis, and P. Soucaille The genes for butanol and acetone formation in Clostridium acetobutylicum ATCC 824 reside on a large plasmid whose loss leads to degenaration of the strain J. Bacteriol. 179 1997 5442 5447
-
(1997)
J. Bacteriol.
, vol.179
, pp. 5442-5447
-
-
Cornillot, E.1
Nair, R.V.2
Papoutsakis, E.T.3
Soucaille, P.4
-
8
-
-
0030670713
-
Physical and genetic map of the Clostridium acetobutylicum ATCC 824 chromosome
-
E. Cornillot, C. Croux, and P. Soucaille Physical and genetic map of the Clostridium acetobutylicum ATCC 824 chromosome J. Bacteriol. 179 1997 5442 5447
-
(1997)
J. Bacteriol.
, vol.179
, pp. 5442-5447
-
-
Cornillot, E.1
Croux, C.2
Soucaille, P.3
-
9
-
-
0034902930
-
Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum
-
J. Nölling, G. Breton, M.V. Omelchenko, K.S. Makarova, Q. Zeng, R. Gibson, H.M. Lee, J. Dubois, D. Qiu, J. Hitti, Y.I. Wolf, R.L. Tatusov, F. Sabathé, L. Doucette-Stamm, P. Soucaille, M.J. Daly, G.N. Bennett, E.V. Koonin, and D.R. Smith Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum J. Bacteriol. 183 2001 4823 4838
-
(2001)
J. Bacteriol.
, vol.183
, pp. 4823-4838
-
-
Nölling, J.1
Breton, G.2
Omelchenko, M.V.3
Makarova, K.S.4
Zeng, Q.5
Gibson, R.6
Lee, H.M.7
Dubois, J.8
Qiu, D.9
Hitti, J.10
Wolf, Y.I.11
Tatusov, R.L.12
Sabathé, F.13
Doucette-Stamm, L.14
Soucaille, P.15
Daly, M.J.16
Bennett, G.N.17
Koonin, E.V.18
Smith, D.R.19
-
10
-
-
0037418012
-
The genome sequence of Clostridium tetani, the causative agent of tetanus disease
-
H. Brüggemann, S. Bäumer, W.F. Fricke, A. Wiezer, H. Liesegang, I. Decker, C. Herzberg, R. Martinez-Arias, R. Merkl, A. Henne, and G. Gottschalk The genome sequence of Clostridium tetani, the causative agent of tetanus disease Proc. Natl. Acad. Sci. U. S. A. 100 2003 1316 1321
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 1316-1321
-
-
Brüggemann, H.1
Bäumer, S.2
Fricke, W.F.3
Wiezer, A.4
Liesegang, H.5
Decker, I.6
Herzberg, C.7
Martinez-Arias, R.8
Merkl, R.9
Henne, A.10
Gottschalk, G.11
-
11
-
-
0037154260
-
Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater
-
T. Shimizu, K. Ohtani, H. Hirakawa, K. Ohshima, A. Yamashita, T. Shiba, N. Ogasawara, M. Hattori, S. Kuhara, and H. Hayashi Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater Proc. Natl. Acad. Sci. U. S. A. 99 2002 996 1001
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 996-1001
-
-
Shimizu, T.1
Ohtani, K.2
Hirakawa, H.3
Ohshima, K.4
Yamashita, A.5
Shiba, T.6
Ogasawara, N.7
Hattori, M.8
Kuhara, S.9
Hayashi, H.10
-
12
-
-
0036199858
-
Transcriptional regulation of solventogenesis in Clostridium acetobutylicum
-
P. Durre, M. Bohringer, S. Nakotte, S. Schaffer, K. Thormann, and B. Zickner Transcriptional regulation of solventogenesis in Clostridium acetobutylicum J. Mol. Microbiol. Biotechnol. 4 2002 295 300
-
(2002)
J. Mol. Microbiol. Biotechnol.
, vol.4
, pp. 295-300
-
-
Durre, P.1
Bohringer, M.2
Nakotte, S.3
Schaffer, S.4
Thormann, K.5
Zickner, B.6
-
13
-
-
0032469479
-
Physiology of carbohydrate to solvent conversion by clostridia
-
W.J. Mitchell Physiology of carbohydrate to solvent conversion by clostridia Adv. Microb. Physiol. 39 1998 31 130
-
(1998)
Adv. Microb. Physiol.
, vol.39
, pp. 31-130
-
-
Mitchell, W.J.1
-
14
-
-
0000653855
-
Molecular regulation and metabolic engineering of solvent production by Clostridium acetobutylicum
-
E.T. Papoutsakis, and G.N. Bennett Molecular regulation and metabolic engineering of solvent production by Clostridium acetobutylicum Bioprocess. Technol. 24 1999 253 279
-
(1999)
Bioprocess. Technol.
, vol.24
, pp. 253-279
-
-
Papoutsakis, E.T.1
Bennett, G.N.2
-
15
-
-
0031885009
-
Regulation of solvent production in Clostridium acetobutylicum
-
L. Girbal, and P. Soucaille Regulation of solvent production in Clostridium acetobutylicum Trends Biotechnol. 16 1998 11 16
-
(1998)
Trends Biotechnol.
, vol.16
, pp. 11-16
-
-
Girbal, L.1
Soucaille, P.2
-
16
-
-
0034820537
-
Interrelating different types of genomic data: From proteome to secretome: Oming in on function
-
D. Greenbaum, N.M. Luscombe, R. Jansen, J. Qian, and M. Gerstein Interrelating different types of genomic data: from proteome to secretome: Oming in on function Genome Res. 11 2001 1463 1468
-
(2001)
Genome Res.
, vol.11
, pp. 1463-1468
-
-
Greenbaum, D.1
Luscombe, N.M.2
Jansen, R.3
Qian, J.4
Gerstein, M.5
-
17
-
-
0033818171
-
Signal peptide-dependent protein transport in Bacillus subtilis: A genome-based survey of the secretome
-
H. Tjalsma, A. Bolhuis, J.D. Jongbloed, S. Bron, and J.M. van Dijl Signal peptide-dependent protein transport in Bacillus subtilis: a genome-based survey of the secretome Microbiol. Mol. Biol. Rev. 64 2000 515 547
-
(2000)
Microbiol. Mol. Biol. Rev.
, vol.64
, pp. 515-547
-
-
Tjalsma, H.1
Bolhuis, A.2
Jongbloed, J.D.3
Bron, S.4
Van Dijl, J.M.5
-
19
-
-
0027401020
-
Protein secretion in Bacillus species
-
M. Simonen, and I. Palva Protein secretion in Bacillus species Microbiol. Rev. 57 1993 109 137
-
(1993)
Microbiol. Rev.
, vol.57
, pp. 109-137
-
-
Simonen, M.1
Palva, I.2
-
20
-
-
2942561968
-
Proteomics of protein secretion by Bacillus subtilis: Separating the "secrets" of the secretome
-
H. Tjalsma, H. Antelmann, J.D. Jongbloed, P.G. Braun, E. Darmon, R. Dorenbos, J.Y. Dubois, H. Westers, G. Zanen, W.J. Quax, O.P. Kuipers, S. Bron, M. Hecker, and J.M. Van Dijl Proteomics of protein secretion by Bacillus subtilis: separating the "secrets" of the secretome Microbiol. Mol. Biol. Rev. 68 2004 207 233
-
(2004)
Microbiol. Mol. Biol. Rev.
, vol.68
, pp. 207-233
-
-
Tjalsma, H.1
Antelmann, H.2
Jongbloed, J.D.3
Braun, P.G.4
Darmon, E.5
Dorenbos, R.6
Dubois, J.Y.7
Westers, H.8
Zanen, G.9
Quax, W.J.10
Kuipers, O.P.11
Bron, S.12
Hecker, M.13
Van Dijl, J.M.14
-
21
-
-
0141831778
-
A proteomic view of cell physiology of Bacillus subtilis-Bringing the genome sequence to life
-
M. Hecker A proteomic view of cell physiology of Bacillus subtilis-Bringing the genome sequence to life Adv. Biochem. Eng. Biotechnol. 83 2003 57 92
-
(2003)
Adv. Biochem. Eng. Biotechnol.
, vol.83
, pp. 57-92
-
-
Hecker, M.1
-
22
-
-
0036871862
-
Late stages of protein secretion in bacilli
-
M.R. Sharipova Late stages of protein secretion in bacilli Biochemistry (Mosc) 67 2002 1207 1216
-
(2002)
Biochemistry (Mosc)
, vol.67
, pp. 1207-1216
-
-
Sharipova, M.R.1
-
24
-
-
1942486733
-
Insights in metabolism and toxin production from the complete genome sequence of Clostridium tetani
-
H. Brüggemann, and G. Gottschalk Insights in metabolism and toxin production from the complete genome sequence of Clostridium tetani Anaerobe 10 2004 53 68
-
(2004)
Anaerobe
, vol.10
, pp. 53-68
-
-
Brüggemann, H.1
Gottschalk, G.2
-
25
-
-
0027434697
-
Membrane traffic wardens and protein secretion in Gram-negative bacteria
-
G.P. Salmond, and P.J. Reeves Membrane traffic wardens and protein secretion in Gram-negative bacteria Trends Biochem. Sci. 18 1993 7 12
-
(1993)
Trends Biochem. Sci.
, vol.18
, pp. 7-12
-
-
Salmond, G.P.1
Reeves, P.J.2
-
26
-
-
0036132235
-
Ushers and secretins: Channels for the secretion of folded proteins across the bacterial outer membrane
-
D.G. Thanassi Ushers and secretins: channels for the secretion of folded proteins across the bacterial outer membrane J. Mol. Microbiol. Biotechnol. 4 2002 11 20
-
(2002)
J. Mol. Microbiol. Biotechnol.
, vol.4
, pp. 11-20
-
-
Thanassi, D.G.1
-
27
-
-
0034255386
-
Renaming protein secretion in the Gram-negative bacteria
-
I.R. Henderson, J.P. Nataro, J.B. Kaper, T.F. Meyer, S.K. Farrand, D.L. Burns, B.B. Finlay, and J.W. St Geme III Renaming protein secretion in the Gram-negative bacteria Trends Microbiol. 8 2000 352
-
(2000)
Trends Microbiol.
, vol.8
, pp. 352
-
-
Henderson, I.R.1
Nataro, J.P.2
Kaper, J.B.3
Meyer, T.F.4
Farrand, S.K.5
Burns, D.L.6
Finlay, B.B.7
St Geme III, J.W.8
-
28
-
-
0142058859
-
Le système de sécrétion de Type V chez les bactéries Gram-négatives
-
M. Desvaux, N.J. Parham, and I.R. Henderson Le système de sécrétion de Type V chez les bactéries Gram- négatives Biofutur 237 2003 34 37
-
(2003)
Biofutur
, vol.237
, pp. 34-37
-
-
Desvaux, M.1
Parham, N.J.2
Henderson, I.R.3
-
29
-
-
0032169654
-
The great escape: Structure and function of the autotransporter proteins
-
I.R. Henderson, F. Navarro-Garcia, and J.P. Nataro The great escape: structure and function of the autotransporter proteins Trends Microbiol. 6 1998 370 378
-
(1998)
Trends Microbiol.
, vol.6
, pp. 370-378
-
-
Henderson, I.R.1
Navarro-Garcia, F.2
Nataro, J.P.3
-
30
-
-
0037453098
-
Type III secretion systems and bacterial flagella: Insights into their function from structural similarities
-
A. Blocker, K. Komoriya, and S. Aizawa Type III secretion systems and bacterial flagella: insights into their function from structural similarities Proc. Natl. Acad. Sci. U. S. A. 100 2003 3027 3030
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 3027-3030
-
-
Blocker, A.1
Komoriya, K.2
Aizawa, S.3
-
31
-
-
0036112267
-
Type IVb secretion by intracellular pathogens
-
J.A. Sexton, and J.P. Vogel Type IVb secretion by intracellular pathogens Traffic 3 2002 178 185
-
(2002)
Traffic
, vol.3
, pp. 178-185
-
-
Sexton, J.A.1
Vogel, J.P.2
-
32
-
-
0642345085
-
Channel-tunnels: Outer membrane components of Type I secretion systems and multidrug efflux pumps of Gram-negative bacteria
-
C. Andersen Channel-tunnels: outer membrane components of Type I secretion systems and multidrug efflux pumps of Gram-negative bacteria Rev. Physiol. Biochem. Pharmacol. 147 2003 122 165
-
(2003)
Rev. Physiol. Biochem. Pharmacol.
, vol.147
, pp. 122-165
-
-
Andersen, C.1
-
33
-
-
0036532450
-
Port of entry-the Type III secretion translocon
-
D. Buttner, and U. Bonas Port of entry-the Type III secretion translocon Trends Microbiol. 10 2002 186 192
-
(2002)
Trends Microbiol.
, vol.10
, pp. 186-192
-
-
Buttner, D.1
Bonas, U.2
-
34
-
-
0035019730
-
Type II secretion and pathogenesis
-
M. Sandkvist Type II secretion and pathogenesis Infect. Immun. 69 2001 3523 3535
-
(2001)
Infect. Immun.
, vol.69
, pp. 3523-3535
-
-
Sandkvist, M.1
-
35
-
-
0035035578
-
Type IV secretion: Intercellular transfer of macromolecules by systems ancestrally related to conjugation machines
-
P.J. Christie Type IV secretion: intercellular transfer of macromolecules by systems ancestrally related to conjugation machines Mol. Microbiol. 40 2001 294 305
-
(2001)
Mol. Microbiol.
, vol.40
, pp. 294-305
-
-
Christie, P.J.1
-
36
-
-
0033842544
-
Secretion of virulence determinants by the general secretory pathway in Gram-negative pathogens: An evolving story
-
C. Stathopoulos, D.R. Hendrixson, D.G. Thanassi, S.J. Hultgren, J.W. St Geme III, and R. Curtiss III Secretion of virulence determinants by the general secretory pathway in Gram-negative pathogens: an evolving story Microbes Infect. 2 2000 1061 1072
-
(2000)
Microbes Infect.
, vol.2
, pp. 1061-1072
-
-
Stathopoulos, C.1
Hendrixson, D.R.2
Thanassi, D.G.3
Hultgren, S.J.4
St Geme III, J.W.5
Curtiss III, R.6
-
37
-
-
0033937939
-
Multiple pathways allow protein secretion across the bacterial outer membrane
-
D.G. Thanassi, and S.J. Hultgren Multiple pathways allow protein secretion across the bacterial outer membrane Curr. Opin. Cell. Biol. 12 2000 420 430
-
(2000)
Curr. Opin. Cell. Biol.
, vol.12
, pp. 420-430
-
-
Thanassi, D.G.1
Hultgren, S.J.2
-
39
-
-
0033008601
-
Protein targeting to the bacterial cytoplasmic membrane
-
P. Fekkes, and A.J. Driessen Protein targeting to the bacterial cytoplasmic membrane Microbiol. Mol. Biol. Rev. 63 1999 161 173
-
(1999)
Microbiol. Mol. Biol. Rev.
, vol.63
, pp. 161-173
-
-
Fekkes, P.1
Driessen, A.J.2
-
41
-
-
0036568776
-
The ESAT-6/WXG100 superfamily-And a new Gram-positive secretion system?
-
M.J. Pallen The ESAT-6/WXG100 superfamily-And a new Gram-positive secretion system? Trends Microbiol. 10 2002 209 212
-
(2002)
Trends Microbiol.
, vol.10
, pp. 209-212
-
-
Pallen, M.J.1
-
42
-
-
0942290453
-
Individual RD1-region genes are required for export of ESAT-6/CFP-10 and for virulence of Mycobacterium tuberculosis
-
K.M. Guinn, M.J. Hickey, S.K. Mathur, K.L. Zakel, J.E. Grotzke, D.M. Lewinsohn, S. Smith, and D.R. Sherman Individual RD1-region genes are required for export of ESAT-6/CFP-10 and for virulence of Mycobacterium tuberculosis Mol. Microbiol. 51 2004 359 370
-
(2004)
Mol. Microbiol.
, vol.51
, pp. 359-370
-
-
Guinn, K.M.1
Hickey, M.J.2
Mathur, S.K.3
Zakel, K.L.4
Grotzke, J.E.5
Lewinsohn, D.M.6
Smith, S.7
Sherman, D.R.8
-
43
-
-
0025183708
-
Basic local alignment search tool
-
S.F. Altschul, W. Gish, W. Miller, E.W. Myers, and D.J. Lipman Basic local alignment search tool J. Mol. Biol. 215 1990 403 410
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
44
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
S.F. Altschul, T.L. Madden, A.A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D.J. Lipman Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res. 25 1997 3389 3402
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
45
-
-
0346494850
-
ColiBASE: An online database for Escherichia coli, Shigella and Salmonella comparative genomics
-
R.R. Chaudhuri, A.M. Khan, and M.J. Pallen coliBASE: an online database for Escherichia coli, Shigella and Salmonella comparative genomics Nucleic Acids Res. 32 2004 D296 D299
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Chaudhuri, R.R.1
Khan, A.M.2
Pallen, M.J.3
-
46
-
-
0030925920
-
Pfam: A comprehensive database of protein domain families based on seed alignments
-
E.L. Soohammer, S.R. Eddy, and R. Durbin Pfam: a comprehensive database of protein domain families based on seed alignments Proteins 28 1997 405 420
-
(1997)
Proteins
, vol.28
, pp. 405-420
-
-
Soohammer, E.L.1
Eddy, S.R.2
Durbin, R.3
-
47
-
-
0037252683
-
CDD: A curated Entrez database of conserved domain alignments
-
A. Marchler-Bauer, J.B. Anderson, C. DeWeese-Scott, N.D. Fedorova, L.Y. Geer, S. He, D.I. Hurwitz, J.D. Jackson, A.R. Jacobs, C.J. Lanczycki, C.A. Liebert, C. Liu, T. Madej, G.H. Marchler, R. Mazumder, A.N. Nikolskaya, A.R. Panchenko, B.S. Rao, B.A. Shoemaker, V. Simonyan, J.S. Song, R.A. Thiessen, S. Vasudevan, Y. Wang, R.A. Yamashita, J.J. Yin, and S.H. Bryant CDD: a curated Entrez database of conserved domain alignments Nucl. Acids Res. 31 2003 383 387
-
(2003)
Nucl. Acids Res.
, vol.31
, pp. 383-387
-
-
Marchler-Bauer, A.1
Anderson, J.B.2
Deweese-Scott, C.3
Fedorova, N.D.4
Geer, L.Y.5
He, S.6
Hurwitz, D.I.7
Jackson, J.D.8
Jacobs, A.R.9
Lanczycki, C.J.10
Liebert, C.A.11
Liu, C.12
Madej, T.13
Marchler, G.H.14
Mazumder, R.15
Nikolskaya, A.N.16
Panchenko, A.R.17
Rao, B.S.18
Shoemaker, B.A.19
Simonyan, V.20
Song, J.S.21
Thiessen, R.A.22
Vasudevan, S.23
Wang, Y.24
Yamashita, R.A.25
Yin, J.J.26
Bryant, S.H.27
more..
-
48
-
-
0001244666
-
ScanProsite: A reference implementation of a PROSITE scanning tool
-
A. Gattiker, E. Gasteiger, and A. Bairoch ScanProsite: a reference implementation of a PROSITE scanning tool Appl. Bioinformatics 1 2002 107 108
-
(2002)
Appl. Bioinformatics
, vol.1
, pp. 107-108
-
-
Gattiker, A.1
Gasteiger, E.2
Bairoch, A.3
-
49
-
-
0345864022
-
SMART 4.0: Towards genomic data integration
-
I. Letunic, R.R. Copley, S. Schmidt, F.D. Ciccarelli, T. Doerks, J. Schultz, C.P. Ponting, and P. Bork SMART 4.0: towards genomic data integration Nucleic Acids Res. 32 2004 D142 D144
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Letunic, I.1
Copley, R.R.2
Schmidt, S.3
Ciccarelli, F.D.4
Doerks, T.5
Schultz, J.6
Ponting, C.P.7
Bork, P.8
-
50
-
-
0037251964
-
The InterPro Database, 2003 brings increased coverage and new features
-
N.J. Mulder, R. Apweiler, T.K. Attwood, A. Bairoch, D. Barrell, A. Bateman, D. Binns, M. Biswas, P. Bradley, P. Bork, P. Bucher, R.R. Copley, E. Courcelle, U. Das, R. Durbin, L. Falquet, W. Fleischmann, S. Griffiths-Jones, D. Haft, N. Harte, N. Hulo, D. Kahn, A. Kanapin, M. Krestyaninova, R. Lopez, I. Letunic, D. Lonsdale, V. Silventoinen, S.E. Orchard, M. Pagni, D. Peyruc, C.P. Ponting, J.D. Selengut, F. Servant, C.J.A. Sigrist, R. Vaughan, and E.M. Zdobnov The InterPro Database, 2003 brings increased coverage and new features Nucleic Acids Res. 31 2003 315 318
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 315-318
-
-
Mulder, N.J.1
Apweiler, R.2
Attwood, T.K.3
Bairoch, A.4
Barrell, D.5
Bateman, A.6
Binns, D.7
Biswas, M.8
Bradley, P.9
Bork, P.10
Bucher, P.11
Copley, R.R.12
Courcelle, E.13
Das, U.14
Durbin, R.15
Falquet, L.16
Fleischmann, W.17
Griffiths-Jones, S.18
Haft, D.19
Harte, N.20
Hulo, N.21
Kahn, D.22
Kanapin, A.23
Krestyaninova, M.24
Lopez, R.25
Letunic, I.26
Lonsdale, D.27
Silventoinen, V.28
Orchard, S.E.29
Pagni, M.30
Peyruc, D.31
Ponting, C.P.32
Selengut, J.D.33
Servant, F.34
Sigrist, C.J.A.35
Vaughan, R.36
Zdobnov, E.M.37
more..
-
51
-
-
0032964297
-
Blast 2 sequences-A new tool for comparing protein and nucleotide sequences
-
T.A. Tatusova, and T.L. Madden Blast 2 sequences-A new tool for comparing protein and nucleotide sequences FEMS Microbiol. Lett. 174 1999 247 250
-
(1999)
FEMS Microbiol. Lett.
, vol.174
, pp. 247-250
-
-
Tatusova, T.A.1
Madden, T.L.2
-
52
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
D. Higgins, J. Thompson, T. Gibson, J.D. Thompson, D.G. Higgins, and T.J. Gibson CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res. 22 1994 4673 4680
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Higgins, D.1
Thompson, J.2
Gibson, T.3
Thompson, J.D.4
Higgins, D.G.5
Gibson, T.J.6
-
53
-
-
0037376783
-
Protein secretion systems of Pseudomonas aeruginosa and P. fluorescens
-
Q. Ma, Y. Zhai, J.C. Schneider, T.M. Ramseir, and M.H. Saier Jr. Protein secretion systems of Pseudomonas aeruginosa and P. fluorescens Biochim. Biophys. Acta, Biomembr. 1611 2003 223 233
-
(2003)
Biochim. Biophys. Acta, Biomembr.
, vol.1611
, pp. 223-233
-
-
Ma, Q.1
Zhai, Y.2
Schneider, J.C.3
Ramseir, T.M.4
Saier Jr., M.H.5
-
55
-
-
0346494926
-
TransportDB: A relational database of cellular membrane transport systems
-
Q. Ren, K.H. Kang, and I.T. Paulsen TransportDB: a relational database of cellular membrane transport systems Nucleic Acids Res. 32 2004 D284 D288
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Ren, Q.1
Kang, K.H.2
Paulsen, I.T.3
-
56
-
-
0036568776
-
The ESAT-6/WXG100 superfamily-And a new Gram-positive secretion system?
-
M.J. Pallen The ESAT-6/WXG100 superfamily-And a new Gram-positive secretion system? Trends Microbiol. 10 2002 209 212
-
(2002)
Trends Microbiol.
, vol.10
, pp. 209-212
-
-
Pallen, M.J.1
-
57
-
-
12844288619
-
EsxA and EsxB are secreted by an ESAT-6-like system that is required for the pathogenesis of Staphylococcus aureus infections
-
M.L. Burts, W.A. Williams, K. DeBord, and D.M. Missiakas EsxA and EsxB are secreted by an ESAT-6-like system that is required for the pathogenesis of Staphylococcus aureus infections Proc. Natl. Acad. Sci. U. S. A. 102 2005 1169 1174
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 1169-1174
-
-
Burts, M.L.1
Williams, W.A.2
Debord, K.3
Missiakas, D.M.4
-
58
-
-
0033044637
-
Machine learning approaches for the prediction of signal peptides and other protein sorting signals
-
H. Nielsen, S. Brunak, and G. von Heijne Machine learning approaches for the prediction of signal peptides and other protein sorting signals Protein Eng. 12 1999 3 9
-
(1999)
Protein Eng.
, vol.12
, pp. 3-9
-
-
Nielsen, H.1
Brunak, S.2
Von Heijne, G.3
-
59
-
-
0032972509
-
PSORT: A program for detecting sorting signals in proteins and predicting their subcellular localization
-
K. Nakai, and P. Horton PSORT: a program for detecting sorting signals in proteins and predicting their subcellular localization Trends Biochem. Sci. 24 1999 34 36
-
(1999)
Trends Biochem. Sci.
, vol.24
, pp. 34-36
-
-
Nakai, K.1
Horton, P.2
-
60
-
-
0036187913
-
Extensive feature detection of N-terminal protein sorting signals
-
H. Bannai, Y. Tamada, O. Maruyama, K. Nakai, and S. Miyano Extensive feature detection of N-terminal protein sorting signals Bioinformatics 18 2002 298 305
-
(2002)
Bioinformatics
, vol.18
, pp. 298-305
-
-
Bannai, H.1
Tamada, Y.2
Maruyama, O.3
Nakai, K.4
Miyano, S.5
-
61
-
-
0036066456
-
Pattern searches for the identification of putative lipoprotein genes in Gram-positive bacterial genomes
-
I. Sutcliffe, and D.J. Harrington Pattern searches for the identification of putative lipoprotein genes in Gram-positive bacterial genomes Microbiology 148 2002 2065 2077
-
(2002)
Microbiology
, vol.148
, pp. 2065-2077
-
-
Sutcliffe, I.1
Harrington, D.J.2
-
62
-
-
0036091972
-
DOLOP-Database of bacterial lipoproteins
-
M.M. Babu, and K. Sankaran DOLOP-Database of bacterial lipoproteins Bioinformatics 18 2002 641 643
-
(2002)
Bioinformatics
, vol.18
, pp. 641-643
-
-
Babu, M.M.1
Sankaran, K.2
-
63
-
-
0041341888
-
Prediction of lipoprotein signal peptides in Gram-negative bacteria
-
A.S. Juncker, H. Willenbrock, G. Von Heijne, S. Brunak, H. Nielsen, and A. Krogh Prediction of lipoprotein signal peptides in Gram-negative bacteria Protein Sci. 12 2003 1652 1662
-
(2003)
Protein Sci.
, vol.12
, pp. 1652-1662
-
-
Juncker, A.S.1
Willenbrock, H.2
Von Heijne, G.3
Brunak, S.4
Nielsen, H.5
Krogh, A.6
-
64
-
-
0000207681
-
TMbase-A database of membrane spanning protein segments
-
K. Hofmann, and W. Stoffel TMbase-A database of membrane spanning protein segments Biol. Chem. Hoppe-Seyler 374 1993 166
-
(1993)
Biol. Chem. Hoppe-Seyler
, vol.374
, pp. 166
-
-
Hofmann, K.1
Stoffel, W.2
-
65
-
-
0030759333
-
Prediction of transmembrane α-helices in prokaryotic membrane proteins: The dense alignment surface method
-
M. Cserzo, E. Wallin, I. Simon, G. von Heijne, and A. Elofsson Prediction of transmembrane α-helices in prokaryotic membrane proteins: the dense alignment surface method Protein Eng. 10 1997 673 676
-
(1997)
Protein Eng.
, vol.10
, pp. 673-676
-
-
Cserzo, M.1
Wallin, E.2
Simon, I.3
Von Heijne, G.4
Elofsson, A.5
-
66
-
-
0028568176
-
TopPred II: An improved software for membrane protein structure predictions
-
M.G. Claros, and G. von Heijne TopPred II: an improved software for membrane protein structure predictions Comput. Appl. Biosci. 10 1994 685 686
-
(1994)
Comput. Appl. Biosci.
, vol.10
, pp. 685-686
-
-
Claros, M.G.1
Von Heijne, G.2
-
67
-
-
0030920499
-
Binding and transport of transforming DNA by Bacillus subtilis: The role of type 4 pilin-like proteins-A review
-
D. Dubnau Binding and transport of transforming DNA by Bacillus subtilis: the role of type 4 pilin-like proteins-A review Gene 192 1997 191 198
-
(1997)
Gene
, vol.192
, pp. 191-198
-
-
Dubnau, D.1
-
68
-
-
0036192260
-
Signal peptides of secreted proteins of the archaeon Sulfolobus solfataricus: A genomic survey
-
S.V. Albers, and A.J. Driessen Signal peptides of secreted proteins of the archaeon Sulfolobus solfataricus: a genomic survey Arch. Microbiol. 177 2002 209 216
-
(2002)
Arch. Microbiol.
, vol.177
, pp. 209-216
-
-
Albers, S.V.1
Driessen, A.J.2
-
69
-
-
0037317124
-
Prokaryotic utilization of the twin-arginine translocation pathway: A genomic survey
-
K. Dilks, R.W. Rose, E. Hartmann, and M. Pohlschröder Prokaryotic utilization of the twin-arginine translocation pathway: a genomic survey J. Bacteriol. 185 2003 1478 1483
-
(2003)
J. Bacteriol.
, vol.185
, pp. 1478-1483
-
-
Dilks, K.1
Rose, R.W.2
Hartmann, E.3
Pohlschröder, M.4
-
70
-
-
0035014565
-
The ABC of ABCs: A phylogenetic and functional classification of ABC systems in living organisms
-
E. Dassa, and P. Bouige The ABC of ABCs: a phylogenetic and functional classification of ABC systems in living organisms Res. Microbiol. 152 2001 211 229
-
(2001)
Res. Microbiol.
, vol.152
, pp. 211-229
-
-
Dassa, E.1
Bouige, P.2
-
71
-
-
0033787084
-
New ABC transporter mediating the detachment of lipid-modified proteins from membranes
-
T. Yakushi, K. Masuda, S.I. Narita, S.I. Matsuyama, and H. Tokuda New ABC transporter mediating the detachment of lipid-modified proteins from membranes Nat. Cell. Biol. 2 2000 212 218
-
(2000)
Nat. Cell. Biol.
, vol.2
, pp. 212-218
-
-
Yakushi, T.1
Masuda, K.2
Narita, S.I.3
Matsuyama, S.I.4
Tokuda, H.5
-
72
-
-
14444277712
-
Release of thioredoxin via the mechanosensitive channel MscL during osmotic downshock of Escherichia coli cells
-
B. Ajouz, A. Berrier, A. Garrigues, M. Besnard, and A. Ghazi Release of thioredoxin via the mechanosensitive channel MscL during osmotic downshock of Escherichia coli cells J. Biol. Chem. 273 1998 26670 26674
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 26670-26674
-
-
Ajouz, B.1
Berrier, A.2
Garrigues, A.3
Besnard, M.4
Ghazi, A.5
-
73
-
-
0037335595
-
Two families of mechanosensitive channel proteins
-
C.D. Pivetti, M.R. Yen, S. Miller, W. Busch, Y.H. Tseng, I.R. Booth, and M.H. Saier Jr. Two families of mechanosensitive channel proteins Microbiol. Mol. Biol. Rev. 67 2003 66 85
-
(2003)
Microbiol. Mol. Biol. Rev.
, vol.67
, pp. 66-85
-
-
Pivetti, C.D.1
Yen, M.R.2
Miller, S.3
Busch, W.4
Tseng, Y.H.5
Booth, I.R.6
Saier Jr., M.H.7
-
75
-
-
0034995184
-
The structural basis of protein targeting and translocation in bacteria
-
A.J. Driessen, E.H. Manting, and C. van der Does The structural basis of protein targeting and translocation in bacteria Nature 8 2001 492 498
-
(2001)
Nature
, vol.8
, pp. 492-498
-
-
Driessen, A.J.1
Manting, E.H.2
Van Der Does, C.3
-
76
-
-
0037427963
-
The general protein secretory pathway: Phylogenetic analyses leading to evolutionary conclusions
-
T.B. Cao, and M.H. Saier Jr. The general protein secretory pathway: phylogenetic analyses leading to evolutionary conclusions Biochim. Biophys. Acta, Biomembr. 1609 2003 115 125
-
(2003)
Biochim. Biophys. Acta, Biomembr.
, vol.1609
, pp. 115-125
-
-
Cao, T.B.1
Saier Jr., M.H.2
-
77
-
-
0036091006
-
An accessory sec locus of Streptococcus gordonii is required for export of the surface protein GspB and for normal levels of binding to human platelets
-
B.A. Bensing, and P.M. Sullam An accessory sec locus of Streptococcus gordonii is required for export of the surface protein GspB and for normal levels of binding to human platelets Mol. Microbiol. 44 2002 1081 1094
-
(2002)
Mol. Microbiol.
, vol.44
, pp. 1081-1094
-
-
Bensing, B.A.1
Sullam, P.M.2
-
79
-
-
0032516913
-
SecDF of Bacillus subtilis, a molecular Siamese twin required for the efficient secretion of proteins
-
A. Bolhuis, C.P. Broekhuizen, A. Sorokin, M. van Roosmalen, G. Venema, S. Bron, W.J. Quax, and J.M. van Dijl SecDF of Bacillus subtilis, a molecular Siamese twin required for the efficient secretion of proteins J. Biol. Chem. 274 1998 21217 21224
-
(1998)
J. Biol. Chem.
, vol.274
, pp. 21217-21224
-
-
Bolhuis, A.1
Broekhuizen, C.P.2
Sorokin, A.3
Van Roosmalen, M.4
Venema, G.5
Bron, S.6
Quax, W.J.7
Van Dijl, J.M.8
-
80
-
-
0034632819
-
YidC mediates membrane protein insertion in bacteria
-
J.C. Samuelson, M. Chen, M. Jiang, I. Moller, M. Wiedmann, A. Kuhn, G.J. Phillips, and R.E. Dalbey YidC mediates membrane protein insertion in bacteria Nature 406 2000 637 641
-
(2000)
Nature
, vol.406
, pp. 637-641
-
-
Samuelson, J.C.1
Chen, M.2
Jiang, M.3
Moller, I.4
Wiedmann, M.5
Kuhn, A.6
Phillips, G.J.7
Dalbey, R.E.8
-
81
-
-
0036806273
-
YidC, a newly defined evolutionarily conserved protein, mediates membrane protein assembly in bacteria
-
M. Chen, K. Xie, F. Jiang, L. Yi, and R.E. Dalbey YidC, a newly defined evolutionarily conserved protein, mediates membrane protein assembly in bacteria Biol. Chem. 383 2002 1565 1572
-
(2002)
Biol. Chem.
, vol.383
, pp. 1565-1572
-
-
Chen, M.1
Xie, K.2
Jiang, F.3
Yi, L.4
Dalbey, R.E.5
-
83
-
-
0037012970
-
Protein-translocating outer membrane porins of Gram-negative bacteria
-
M.R. Yen, C.R. Peabody, S.M. Partovi, Y. Zhai, Y.H. Tseng, and M.H. Saier Protein-translocating outer membrane porins of Gram-negative bacteria Biochim. Biophys. Acta, Biomembr. 1562 2002 6 31
-
(2002)
Biochim. Biophys. Acta, Biomembr.
, vol.1562
, pp. 6-31
-
-
Yen, M.R.1
Peabody, C.R.2
Partovi, S.M.3
Zhai, Y.4
Tseng, Y.H.5
Saier, M.H.6
-
84
-
-
0345505686
-
Versatility of inner membrane protein biogenesis in Escherichia coli
-
L. Froderberg, E. Houben, J.C. Samuelson, M. Chen, S.K. Park, G.J. Phillips, R. Dalbey, J. Luirink, and J.W. De Gier Versatility of inner membrane protein biogenesis in Escherichia coli Mol. Microbiol. 47 2003 1015 1027
-
(2003)
Mol. Microbiol.
, vol.47
, pp. 1015-1027
-
-
Froderberg, L.1
Houben, E.2
Samuelson, J.C.3
Chen, M.4
Park, S.K.5
Phillips, G.J.6
Dalbey, R.7
Luirink, J.8
De Gier, J.W.9
-
85
-
-
0032079702
-
The Escherichia coli SRP and SecB targeting pathways converge at the translocon
-
Q.A. Valent, P.A. Scotti, S. High, J.W. de Gier, G. von Heijne, G. Lentzen, W. Wintermeyer, B. Oudega, and J. Luirink The Escherichia coli SRP and SecB targeting pathways converge at the translocon EMBO J. 17 1998 2504 2512
-
(1998)
EMBO J.
, vol.17
, pp. 2504-2512
-
-
Valent, Q.A.1
Scotti, P.A.2
High, S.3
De Gier, J.W.4
Von Heijne, G.5
Lentzen, G.6
Wintermeyer, W.7
Oudega, B.8
Luirink, J.9
-
86
-
-
0027450561
-
The complete general secretory pathway in Gram-negative bacteria
-
A.P. Pugsley The complete general secretory pathway in Gram-negative bacteria Microbiol. Rev. 57 1993 50 108
-
(1993)
Microbiol. Rev.
, vol.57
, pp. 50-108
-
-
Pugsley, A.P.1
-
87
-
-
0038158265
-
Export of β-lactamase is independent of the signal recognition particle
-
D. Beha, S. Deitermann, M. Muller, and H.G. Koch Export of β-lactamase is independent of the signal recognition particle J. Biol. Chem. 278 2003 22161 22167
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 22161-22167
-
-
Beha, D.1
Deitermann, S.2
Muller, M.3
Koch, H.G.4
-
88
-
-
0037799238
-
Signal recognition particle (SRP)-mediated targeting and Sec-dependent translocation of an extracellular Escherichia coli protein
-
R. Sijbrandi, M.L. Urbanus, C.M. ten Hagen-Jongman, H.D. Bernstein, B. Oudega, B.R. Otto, and J. Luirink Signal recognition particle (SRP)-mediated targeting and Sec-dependent translocation of an extracellular Escherichia coli protein J. Biol. Chem. 278 2003 4654 4659
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 4654-4659
-
-
Sijbrandi, R.1
Urbanus, M.L.2
Ten Hagen-Jongman, C.M.3
Bernstein, H.D.4
Oudega, B.5
Otto, B.R.6
Luirink, J.7
-
89
-
-
0036809395
-
SecB, one small chaperone in the complex milieu of the cell
-
L.L. Randall, and S.J. Hardy SecB, one small chaperone in the complex milieu of the cell Cell. Mol. Life Sci. 59 2002 1617 1623
-
(2002)
Cell. Mol. Life Sci.
, vol.59
, pp. 1617-1623
-
-
Randall, L.L.1
Hardy, S.J.2
-
90
-
-
0030731108
-
The complete genome sequence of the Gram-positive bacterium Bacillus subtilis
-
F. Kunst, N. Ogasawara, I. Moszer, A.M. Albertini, G. Alloni, V. Azevedo, M.G. Bertero, P. Bessieres, A. Bolotin, S. Borchert, R. Borriss, L. Boursier, A. Brans, M. Braun, S.C. Brignell, S. Bron, S. Brouillet, C.V. Bruschi, B. Caldwell, V. Capuano, N.M. Carter, S.K. Choi, J.J. Codani, I.F. Connerton, N.J. Cummings, R.A. Daniel, F. Denizot, K.M. Devine, A. Düsterhöft, S.D. Ehrlich, P.T. Emmerson, K.D. Entian, J. Errington, C. Fabret, E. Ferrari, D. Foulger, C. Fritz, M. Fujita, Y. Fujita, S. Fuma, A. Galizzi, N. Galleron, S.Y. Ghim, P. Glaser, A. Goffeau, E.J. Golightly, G. Grandi, G. Guiseppi, B.J. Guy, K. Haga, J. Haiech, C.R. Harwood, A. Hénaut, H. Hilbert, S. Holsappel, S. Hosono, M.F. Hullo, M. Itaya, L. Jones, B. Joris, D. Karamata, Y. Kasahara, M. Klaerr-Blanchard, C. Klein, Y. Kobayashi, P. Koetter, G. Koningstein, S. Krogh, M. Kumano, K. Kurita, A. Lapidus, S. Lardinois, J. Lauber, V. Lazarevic, S.M. Lee, A. Levine, H. Liu, S. Masuda, C. Mauël, C. Médigue, N. Medina, R.P. Mellado, M. Mizuno, D. Moestl, S. Nakai, M. Noback, D. Noone, M. O'Reilly, K. Ogawa, A. Ogiwara, B. Oudega, S.H. Park, V. Parro, T.M. Pohl, D. Portetelle, S. Porwollik, A.M. Prescott, E. Presecan, P. Pujic, and B. Purnelle The complete genome sequence of the Gram-positive bacterium Bacillus subtilis Nature 390 1997 249 256
-
(1997)
Nature
, vol.390
, pp. 249-256
-
-
Kunst, F.1
Ogasawara, N.2
Moszer, I.3
Albertini, A.M.4
Alloni, G.5
Azevedo, V.6
Bertero, M.G.7
Bessieres, P.8
Bolotin, A.9
Borchert, S.10
Borriss, R.11
Boursier, L.12
Brans, A.13
Braun, M.14
Brignell, S.C.15
Bron, S.16
Brouillet, S.17
Bruschi, C.V.18
Caldwell, B.19
Capuano, V.20
Carter, N.M.21
Choi, S.K.22
Codani, J.J.23
Connerton, I.F.24
Cummings, N.J.25
Daniel, R.A.26
Denizot, F.27
Devine, K.M.28
Düsterhöft, A.29
Ehrlich, S.D.30
Emmerson, P.T.31
Entian, K.D.32
Errington, J.33
Fabret, C.34
Ferrari, E.35
Foulger, D.36
Fritz, C.37
Fujita, M.38
Fujita, Y.39
Fuma, S.40
Galizzi, A.41
Galleron, N.42
Ghim, S.Y.43
Glaser, P.44
Goffeau, A.45
Golightly, E.J.46
Grandi, G.47
Guiseppi, G.48
Guy, B.J.49
Haga, K.50
Haiech, J.51
Harwood, C.R.52
Hénaut, A.53
Hilbert, H.54
Holsappel, S.55
Hosono, S.56
Hullo, M.F.57
Itaya, M.58
Jones, L.59
Joris, B.60
Karamata, D.61
Kasahara, Y.62
Klaerr-Blanchard, M.63
Klein, C.64
Kobayashi, Y.65
Koetter, P.66
Koningstein, G.67
Krogh, S.68
Kumano, M.69
Kurita, K.70
Lapidus, A.71
Lardinois, S.72
Lauber, J.73
Lazarevic, V.74
Lee, S.M.75
Levine, A.76
Liu, H.77
Masuda, S.78
Mauël, C.79
Médigue, C.80
Medina, N.81
Mellado, R.P.82
Mizuno, M.83
Moestl, D.84
Nakai, S.85
Noback, M.86
Noone, D.87
O'Reilly, M.88
Ogawa, K.89
Ogiwara, A.90
Oudega, B.91
Park, S.H.92
Parro, V.93
Pohl, T.M.94
Portetelle, D.95
Porwollik, S.96
Prescott, A.M.97
Presecan, E.98
Pujic, P.99
more..
-
91
-
-
0026503688
-
Synthesis of precursor maltose-binding protein with proline in the +1 position of the cleavage site interferes with the activity of Escherichia coli signal peptidase I in vivo
-
G.A. Barkocy-Gallagher, and P.J. Bassford Jr. Synthesis of precursor maltose-binding protein with proline in the +1 position of the cleavage site interferes with the activity of Escherichia coli signal peptidase I in vivo J. Biol. Chem. 267 1992 1231 1238
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 1231-1238
-
-
Barkocy-Gallagher, G.A.1
Bassford Jr., P.J.2
-
92
-
-
0026507687
-
A signal peptide with a proline next to the cleavage site inhibits leader peptidase when present in a sec-independent protein
-
I. Nilsson, and G. von Heijne A signal peptide with a proline next to the cleavage site inhibits leader peptidase when present in a sec-independent protein FEBS Lett. 299 1992 243 246
-
(1992)
FEBS Lett.
, vol.299
, pp. 243-246
-
-
Nilsson, I.1
Von Heijne, G.2
-
95
-
-
0036568566
-
Surface proteins and the pathogenic potential of Listeria monocytogenes
-
D. Cabanes, P. Dehoux, O. Dussurget, L. Frangeul, and P. Cossart Surface proteins and the pathogenic potential of Listeria monocytogenes Trends Microbiol. 2002 238 245
-
(2002)
Trends Microbiol.
, pp. 238-245
-
-
Cabanes, D.1
Dehoux, P.2
Dussurget, O.3
Frangeul, L.4
Cossart, P.5
-
96
-
-
0000188196
-
Molecular evolution of lytic enzymes of Streptococcus pneumoniae and its bacteriophages
-
E. Garcia, J.L. Garcia, P. Garcia, A. Arraras, J.M. Sanchez-Puelles, and R. Lopez Molecular evolution of lytic enzymes of Streptococcus pneumoniae and its bacteriophages Proc. Natl. Acad. Sci. U. S. A. 85 1988 914 918
-
(1988)
Proc. Natl. Acad. Sci. U. S. A.
, vol.85
, pp. 914-918
-
-
Garcia, E.1
Garcia, J.L.2
Garcia, P.3
Arraras, A.4
Sanchez-Puelles, J.M.5
Lopez, R.6
-
97
-
-
0035077376
-
Characterization of a cell surface protein of Clostridium difficile with adhesive properties
-
A.J. Waligora, C. Hennequin, P. Mullany, P. Bourlioux, A. Collignon, and T. Karjalainen Characterization of a cell surface protein of Clostridium difficile with adhesive properties Infect. Immun. 69 2001 2144 2153
-
(2001)
Infect. Immun.
, vol.69
, pp. 2144-2153
-
-
Waligora, A.J.1
Hennequin, C.2
Mullany, P.3
Bourlioux, P.4
Collignon, A.5
Karjalainen, T.6
-
98
-
-
0024581874
-
Identification of an extracellular protein of Listeria monocytogenes possibly involved in intracellular uptake by mammalian cells
-
M. Kuhn, and W. Goebel Identification of an extracellular protein of Listeria monocytogenes possibly involved in intracellular uptake by mammalian cells Infect. Immun. 57 1989 55 61
-
(1989)
Infect. Immun.
, vol.57
, pp. 55-61
-
-
Kuhn, M.1
Goebel, W.2
-
99
-
-
0027191827
-
The iap gene of Listeria monocytogenes is essential for cell viability, and its gene product, p60, has bacteriolytic activity
-
M.D. Wuenscher, S. Kohler, A. Bubert, U. Gerike, and W. Goebel The iap gene of Listeria monocytogenes is essential for cell viability, and its gene product, p60, has bacteriolytic activity J. Bacteriol. 175 1993 3491 3501
-
(1993)
J. Bacteriol.
, vol.175
, pp. 3491-3501
-
-
Wuenscher, M.D.1
Kohler, S.2
Bubert, A.3
Gerike, U.4
Goebel, W.5
-
100
-
-
0028801963
-
Tracking the evolution of the bacterial choline-binding domain: Molecular characterization of the Clostridium acetobutylicum NCIB 8052 cspA gene
-
A.R. Sanchez-Beato, C. Ronda, and J.L. Garcia Tracking the evolution of the bacterial choline-binding domain: molecular characterization of the Clostridium acetobutylicum NCIB 8052 cspA gene J. Bacteriol. 177 1995 1098 1103
-
(1995)
J. Bacteriol.
, vol.177
, pp. 1098-1103
-
-
Sanchez-Beato, A.R.1
Ronda, C.2
Garcia, J.L.3
-
101
-
-
0141960388
-
Cellulosomes from mesophilic bacteria
-
R.H. Doi, A. Kosugi, K. Murashima, Y. Tamaru, and S.O. Han Cellulosomes from mesophilic bacteria J. Bacteriol. 185 2003 5907 5914
-
(2003)
J. Bacteriol.
, vol.185
, pp. 5907-5914
-
-
Doi, R.H.1
Kosugi, A.2
Murashima, K.3
Tamaru, Y.4
Han, S.O.5
-
102
-
-
0033167973
-
The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides
-
Y. Shoham, R. Lamed, and E.A. Bayer The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides Trends Microbiol. 7 1999 275 281
-
(1999)
Trends Microbiol.
, vol.7
, pp. 275-281
-
-
Shoham, Y.1
Lamed, R.2
Bayer, E.A.3
-
103
-
-
0034194743
-
Cohesin-dockerin recognition in cellulosome assembly: Experiment versus hypothesis
-
A. Mechaly, S. Yaron, R. Lamed, H.P. Fierobe, A. Bélaïch, J.P. Bélaïch, Y. Shoham, and E.A. Bayer Cohesin-dockerin recognition in cellulosome assembly: experiment versus hypothesis Proteins 39 2000 170 177
-
(2000)
Proteins
, vol.39
, pp. 170-177
-
-
Mechaly, A.1
Yaron, S.2
Lamed, R.3
Fierobe, H.P.4
Bélaïch, A.5
Bélaïch, J.P.6
Shoham, Y.7
Bayer, E.A.8
-
104
-
-
0345564859
-
Cellulosome assembly revealed by the crystal structure of the cohesin-dockerin complex
-
A.L. Carvalho, F.M.V. Dias, J.A.M. Prates, T. Nagy, H.J. Gilbert, G.J. Davies, L.M.A. Ferreira, M.J. Romao, and C.M.G.A. Fontes Cellulosome assembly revealed by the crystal structure of the cohesin-dockerin complex Proc. Natl. Acad. Sci. U. S. A. 100 2003 13809 13814
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 13809-13814
-
-
Carvalho, A.L.1
Dias, F.M.V.2
Prates, J.A.M.3
Nagy, T.4
Gilbert, H.J.5
Davies, G.J.6
Ferreira, L.M.A.7
Romao, M.J.8
Fontes, C.M.G.A.9
-
105
-
-
0037137211
-
Characterisation of the cellulolytic complex (cellulosome) of Clostridium acetobutylicum
-
F. Sabathé, A. Bélaïch, and P. Soucaille Characterisation of the cellulolytic complex (cellulosome) of Clostridium acetobutylicum FEMS Microbiol. Lett. 217 2002 15 22
-
(2002)
FEMS Microbiol. Lett.
, vol.217
, pp. 15-22
-
-
Sabathé, F.1
Bélaïch, A.2
Soucaille, P.3
-
106
-
-
0345628619
-
Sequence analysis of scaffolding protein CipC and ORFXp, a new cohesin-containing protein in Clostridium cellulolyticum: Comparison of various cohesin domains and subcellular localization of ORFXp
-
S. Pagès, A. Bélaïch, H.P. Fierobe, C. Tardif, C. Gaudin, and J.P. Bélaïch Sequence analysis of scaffolding protein CipC and ORFXp, a new cohesin-containing protein in Clostridium cellulolyticum: comparison of various cohesin domains and subcellular localization of ORFXp J. Bacteriol. 181 1999 1801 1810
-
(1999)
J. Bacteriol.
, vol.181
, pp. 1801-1810
-
-
Pagès, S.1
Bélaïch, A.2
Fierobe, H.P.3
Tardif, C.4
Gaudin, C.5
Bélaïch, J.P.6
-
107
-
-
0344780195
-
Three surface layer homology domains at the N-terminus of the Clostridium cellulovorans major cellulosomal subunit EngE
-
Y. Tamaru, and R.H. Doi Three surface layer homology domains at the N-terminus of the Clostridium cellulovorans major cellulosomal subunit EngE J. Bacteriol. 181 1999 3270 3276
-
(1999)
J. Bacteriol.
, vol.181
, pp. 3270-3276
-
-
Tamaru, Y.1
Doi, R.H.2
-
108
-
-
0036157410
-
Cell-surface-anchoring role of N-terminal surface layer homology domains of Clostridium cellulovorans EngE
-
A. Kosugi, K. Murashima, Y. Tamaru, and R.H. Doi Cell-surface-anchoring role of N-terminal surface layer homology domains of Clostridium cellulovorans EngE J. Bacteriol. 184 2002 884 888
-
(2002)
J. Bacteriol.
, vol.184
, pp. 884-888
-
-
Kosugi, A.1
Murashima, K.2
Tamaru, Y.3
Doi, R.H.4
-
109
-
-
0032969566
-
Surface proteins of Gram-positive bacteria and mechanisms of their targeting to the cell wall envelope
-
W.W. Navarre, and O. Schneewind Surface proteins of Gram-positive bacteria and mechanisms of their targeting to the cell wall envelope Microbiol. Mol. Biol. Rev. 63 1999 174 229
-
(1999)
Microbiol. Mol. Biol. Rev.
, vol.63
, pp. 174-229
-
-
Navarre, W.W.1
Schneewind, O.2
-
111
-
-
0037033061
-
Characterization of unique glycosylated anchor endopeptidase that cleaves the LPXTG sequence motif of cell surface proteins of Gram-positive bacteria
-
S.G. Lee, V. Pancholi, and V.A. Fischetti Characterization of unique glycosylated anchor endopeptidase that cleaves the LPXTG sequence motif of cell surface proteins of Gram-positive bacteria J. Biol. Chem. 277 2002 46912 46922
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 46912-46922
-
-
Lee, S.G.1
Pancholi, V.2
Fischetti, V.A.3
-
112
-
-
2142808787
-
A comparative genome analysis identifies distinct sorting pathways in Gram-positive bacteria
-
D. Comfort, and R.T. Clubb A comparative genome analysis identifies distinct sorting pathways in Gram-positive bacteria Infect. Immun. 72 2004 2710 2722
-
(2004)
Infect. Immun.
, vol.72
, pp. 2710-2722
-
-
Comfort, D.1
Clubb, R.T.2
-
113
-
-
0242693166
-
How bacteria assemble flagella
-
R.M. Macnab How bacteria assemble flagella Annu. Rev. Microbiol. 57 2003 77 100
-
(2003)
Annu. Rev. Microbiol.
, vol.57
, pp. 77-100
-
-
MacNab, R.M.1
-
114
-
-
8844249277
-
Type III flagellar protein export and flagellar assembly
-
R. Macnab Type III flagellar protein export and flagellar assembly Biochim. Biophys. Acta, Mol. Cell Res. 1694 2004 207 217
-
(2004)
Biochim. Biophys. Acta, Mol. Cell Res.
, vol.1694
, pp. 207-217
-
-
MacNab, R.1
-
115
-
-
0024273804
-
New unified nomenclature for the flagellar genes of Escherichia coli and Salmonella typhimurium
-
T. Iino, Y. Komeda, K. Kutsukake, R.M. Macnab, and P. Matsumura New unified nomenclature for the flagellar genes of Escherichia coli and Salmonella typhimurium Microbiol. Rev. 52 1988 533 535
-
(1988)
Microbiol. Rev.
, vol.52
, pp. 533-535
-
-
Iino, T.1
Komeda, Y.2
Kutsukake, K.3
MacNab, R.M.4
Matsumura, P.5
-
117
-
-
0036283447
-
Yop fusions to tightly folded protein domains and their effects on Yersinia enterocolitica Type III secretion
-
V.T. Lee, and O.J. Schneewind Yop fusions to tightly folded protein domains and their effects on Yersinia enterocolitica Type III secretion J. Bacteriol. 184 2002 3740 3745
-
(2002)
J. Bacteriol.
, vol.184
, pp. 3740-3745
-
-
Lee, V.T.1
Schneewind, O.J.2
-
118
-
-
0035930715
-
Role of the Hrp pilus in Type III protein secretion in Pseudomonas syringae
-
Q. Jin, and S.Y. He Role of the Hrp pilus in Type III protein secretion in Pseudomonas syringae Science 294 2001 2556 2558
-
(2001)
Science
, vol.294
, pp. 2556-2558
-
-
Jin, Q.1
He, S.Y.2
-
119
-
-
0033033304
-
A new pathway for the secretion of virulence factors by bacteria, the flagellar export apparatus functions as a protein-secretion system
-
G.M. Young, D.H. Schmiel, and V.L. Miller A new pathway for the secretion of virulence factors by bacteria, the flagellar export apparatus functions as a protein-secretion system Proc. Natl. Acad. Sci. U. S. A. 96 1999 6456 6461
-
(1999)
Proc. Natl. Acad. Sci. U. S. A.
, vol.96
, pp. 6456-6461
-
-
Young, G.M.1
Schmiel, D.H.2
Miller, V.L.3
-
120
-
-
2442705402
-
Secretion of virulence proteins from Campylobacter jejuni is dependent on a functional flagellar export apparatus
-
M.E. Konkel, J.D. Klena, V. Rivera-Amill, M.R. Monteville, D. Biswas, B. Raphael, and J. Mickelson Secretion of virulence proteins from Campylobacter jejuni is dependent on a functional flagellar export apparatus J. Bacteriol. 186 2004 3296 3303
-
(2004)
J. Bacteriol.
, vol.186
, pp. 3296-3303
-
-
Konkel, M.E.1
Klena, J.D.2
Rivera-Amill, V.3
Monteville, M.R.4
Biswas, D.5
Raphael, B.6
Mickelson, J.7
-
121
-
-
0028928392
-
Requirement for FlhA in flagella assembly and swarm-cell differentiation by Proteus mirabilis
-
D. Gygi, M.J. Bailey, C. Allison, and C. Hughes Requirement for FlhA in flagella assembly and swarm-cell differentiation by Proteus mirabilis Mol. Microbiol. 15 1995 761 769
-
(1995)
Mol. Microbiol.
, vol.15
, pp. 761-769
-
-
Gygi, D.1
Bailey, M.J.2
Allison, C.3
Hughes, C.4
-
122
-
-
0036889293
-
Requirement of flhA for swarming differentiation, flagellin export, and secretion of virulence-associated proteins in Bacillus thuringiensis
-
E. Ghelardi, F. Celandroni, S. Salvetti, D.J. Beecher, M. Gominet, D. Lereclus, A.C. Wong, and S. Senesi Requirement of flhA for swarming differentiation, flagellin export, and secretion of virulence-associated proteins in Bacillus thuringiensis J. Bacteriol. 184 2002 6424 6433
-
(2002)
J. Bacteriol.
, vol.184
, pp. 6424-6433
-
-
Ghelardi, E.1
Celandroni, F.2
Salvetti, S.3
Beecher, D.J.4
Gominet, M.5
Lereclus, D.6
Wong, A.C.7
Senesi, S.8
-
123
-
-
0013654574
-
Role of chemotaxis in solvent production by Clostridium acetobutylicum
-
N.A. Gutierrez, and I.S. Maddox Role of chemotaxis in solvent production by Clostridium acetobutylicum Appl. Environ. Microbiol. 53 1987 1924 1927
-
(1987)
Appl. Environ. Microbiol.
, vol.53
, pp. 1924-1927
-
-
Gutierrez, N.A.1
Maddox, I.S.2
-
124
-
-
0003151374
-
The acetone/butanol/ethanol fermentation
-
M.J. Spivey The acetone/butanol/ethanol fermentation Proc. Biochem. 13 1978 2 5
-
(1978)
Proc. Biochem.
, vol.13
, pp. 2-5
-
-
Spivey, M.J.1
-
125
-
-
0041527249
-
Overexpression of groESL in Clostridium acetobutylicum results in increased solvent production and tolerance, prolonged metabolism, and changes in the cell's transcriptional program
-
C.A. Tomas, N.E. Welker, and E.T. Papoutsakis Overexpression of groESL in Clostridium acetobutylicum results in increased solvent production and tolerance, prolonged metabolism, and changes in the cell's transcriptional program Appl. Environ. Microbiol. 69 2003 4951 4965
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 4951-4965
-
-
Tomas, C.A.1
Welker, N.E.2
Papoutsakis, E.T.3
-
126
-
-
0038782128
-
DNA array-based transcriptional analysis of asporogenous, nonsolventogenic Clostridium acetobutylicum strains SKO1 and M5
-
C.A. Tomas, K.V. Alsaker, H.P. Bonarius, W.T. Hendriksen, H. Yang, J.A. Beamish, C.J. Paredes, and E.T. Papoutsakis DNA array-based transcriptional analysis of asporogenous, nonsolventogenic Clostridium acetobutylicum strains SKO1 and M5 J. Bacteriol. 185 2003 4539 4547
-
(2003)
J. Bacteriol.
, vol.185
, pp. 4539-4547
-
-
Tomas, C.A.1
Alsaker, K.V.2
Bonarius, H.P.3
Hendriksen, W.T.4
Yang, H.5
Beamish, J.A.6
Paredes, C.J.7
Papoutsakis, E.T.8
-
127
-
-
0035928718
-
Bacterial flagella and Type III secretion systems
-
S.I. Aizawa Bacterial flagella and Type III secretion systems FEMS Microbiol. Lett. 202 2001 157 164
-
(2001)
FEMS Microbiol. Lett.
, vol.202
, pp. 157-164
-
-
Aizawa, S.I.1
-
128
-
-
0032697140
-
DNA uptake in bacteria
-
D. Dubnau DNA uptake in bacteria Annu. Rev. Microbiol. 53 1999 217 244
-
(1999)
Annu. Rev. Microbiol.
, vol.53
, pp. 217-244
-
-
Dubnau, D.1
-
129
-
-
0345306190
-
Type II protein secretion and its relationship to bacterial Type 4 pili and archaeal flagella
-
C.R. Peabody, Y.J. Chung, M.R. Yen, D. Vidal-Ingigliardi, A.P. Pugsley, and M.H. Saier Jr. Type II protein secretion and its relationship to bacterial Type 4 pili and archaeal flagella Microbiology 149 2003 3051 3072
-
(2003)
Microbiology
, vol.149
, pp. 3051-3072
-
-
Peabody, C.R.1
Chung, Y.J.2
Yen, M.R.3
Vidal-Ingigliardi, D.4
Pugsley, A.P.5
Saier Jr., M.H.6
-
131
-
-
0031950535
-
Cell surface localization and processing of the ComG proteins, required for DNA binding during transformation of Bacillus subtilis
-
Y.S. Chung, F. Breidt, and D. Dubnau Cell surface localization and processing of the ComG proteins, required for DNA binding during transformation of Bacillus subtilis Mol. Microbiol. 29 1998 905 913
-
(1998)
Mol. Microbiol.
, vol.29
, pp. 905-913
-
-
Chung, Y.S.1
Breidt, F.2
Dubnau, D.3
-
132
-
-
0035029580
-
Biology of Type II secretion
-
M. Sandkvist Biology of Type II secretion Mol. Microbiol. 40 2001 271 283
-
(2001)
Mol. Microbiol.
, vol.40
, pp. 271-283
-
-
Sandkvist, M.1
-
133
-
-
0033758854
-
Nonspecific adherence by Actinobacillus actinomycetemcomitans requires genes widespread in Bacteria and Archaea
-
S.C. Kachlany, P.J. Planet, M.K. Bhattacharjee, E. Kollia, R. DeSalle, D.H. Fine, and D.H. Figurski Nonspecific adherence by Actinobacillus actinomycetemcomitans requires genes widespread in Bacteria and Archaea J. Bacteriol. 182 2000 6169 6176
-
(2000)
J. Bacteriol.
, vol.182
, pp. 6169-6176
-
-
Kachlany, S.C.1
Planet, P.J.2
Bhattacharjee, M.K.3
Kollia, E.4
Desalle, R.5
Fine, D.H.6
Figurski, D.H.7
-
134
-
-
0038132217
-
Tight-adherence genes of Actinobacillus actinomycetemcomitans are required for virulence in a rat model
-
H.C. Schreiner, K. Sinatra, J.B. Kaplan, D. Furgang, S.C. Kachlany, P.J. Planet, B.A. Perez, D.H. Figurski, and D.H. Fine Tight-adherence genes of Actinobacillus actinomycetemcomitans are required for virulence in a rat model Proc. Natl. Acad. Sci. U. S. A. 100 2003 7295 7300
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 7295-7300
-
-
Schreiner, H.C.1
Sinatra, K.2
Kaplan, J.B.3
Furgang, D.4
Kachlany, S.C.5
Planet, P.J.6
Perez, B.A.7
Figurski, D.H.8
Fine, D.H.9
-
135
-
-
0038617707
-
The widespread colonization island of Actinobacillus actinomycetemcomitans
-
P.J. Planet, S.C. Kachlany, D.H. Fine, R. DeSalle, and D.H. Figurski The widespread colonization island of Actinobacillus actinomycetemcomitans Nat. Genet. 34 2003 193 198
-
(2003)
Nat. Genet.
, vol.34
, pp. 193-198
-
-
Planet, P.J.1
Kachlany, S.C.2
Fine, D.H.3
Desalle, R.4
Figurski, D.H.5
-
136
-
-
0034816350
-
Nonspecific adherence and fibril biogenesis by Actinobacillus actinomycetemcomitans
-
M.K. Bhattacharjee, S.C. Kachlany, D.H. Fine, and D.H. Figurski Nonspecific adherence and fibril biogenesis by Actinobacillus actinomycetemcomitans J. Bacteriol. 183 2001 5927 5936
-
(2001)
J. Bacteriol.
, vol.183
, pp. 5927-5936
-
-
Bhattacharjee, M.K.1
Kachlany, S.C.2
Fine, D.H.3
Figurski, D.H.4
-
137
-
-
0034600835
-
Identification and cell cycle control of a novel system in Caulobacter cresentus
-
J.M. Skerker, and L. Shapiro Identification and cell cycle control of a novel system in Caulobacter cresentus EMBO J. 19 2000 3223 3234
-
(2000)
EMBO J.
, vol.19
, pp. 3223-3234
-
-
Skerker, J.M.1
Shapiro, L.2
-
138
-
-
0034999675
-
Flp-1, the first representative of a new pilin gene subfamily, is required for non-specific adherence of Actinobacillus actinomycetemcomitans
-
S.C. Kachlany, P.J. Planet, R. Desalle, D.H. Fine, D.H. Figurski, and J.B. Kaplan flp-1, the first representative of a new pilin gene subfamily, is required for non-specific adherence of Actinobacillus actinomycetemcomitans Mol. Microbiol. 40 2001 542 554
-
(2001)
Mol. Microbiol.
, vol.40
, pp. 542-554
-
-
Kachlany, S.C.1
Planet, P.J.2
Desalle, R.3
Fine, D.H.4
Figurski, D.H.5
Kaplan, J.B.6
-
139
-
-
0035449036
-
Genes for tight adherence of Actinobacillus actinomycetemcomitans: From plaque to plague to pond scum
-
S.C. Kachlany, P.J. Planet, R. DeSalle, D.H. Fine, and D.H. Figurski Genes for tight adherence of Actinobacillus actinomycetemcomitans: from plaque to plague to pond scum Trends Microbiol. 9 2001 429 437
-
(2001)
Trends Microbiol.
, vol.9
, pp. 429-437
-
-
Kachlany, S.C.1
Planet, P.J.2
Desalle, R.3
Fine, D.H.4
Figurski, D.H.5
-
140
-
-
0033768655
-
Holins: The protein clocks of bacteriophage infections
-
I.N. Wang, D.L. Smith, and R. Young Holins: the protein clocks of bacteriophage infections Annu. Rev. Microbiol. 54 2000 799 825
-
(2000)
Annu. Rev. Microbiol.
, vol.54
, pp. 799-825
-
-
Wang, I.N.1
Smith, D.L.2
Young, R.3
-
141
-
-
0142043804
-
Are the molecular strategies that control apoptosis conserved in bacteria?
-
K.W. Bayles Are the molecular strategies that control apoptosis conserved in bacteria? Trends Microbiol. 11 2003 306 311
-
(2003)
Trends Microbiol.
, vol.11
, pp. 306-311
-
-
Bayles, K.W.1
-
142
-
-
0034065895
-
The Staphylococcus aureus lrgAB operon modulates murein hydrolase activity and penicillin tolerance
-
K.H. Groicher, B.A. Firek, D.F. Fujimoto, and K.W. Bayles The Staphylococcus aureus lrgAB operon modulates murein hydrolase activity and penicillin tolerance J. Bacteriol. 182 2000 1794 1801
-
(2000)
J. Bacteriol.
, vol.182
, pp. 1794-1801
-
-
Groicher, K.H.1
Firek, B.A.2
Fujimoto, D.F.3
Bayles, K.W.4
-
143
-
-
0037386391
-
The Staphylococcus aureus cidAB operon: Evaluation of its role in regulation of murein hydrolase activity and penicillin tolerance
-
K.C. Rice, B.A. Firek, J.B. Nelson, S.J. Yang, T.G. Patton, and K.W. Bayles The Staphylococcus aureus cidAB operon: evaluation of its role in regulation of murein hydrolase activity and penicillin tolerance J. Bacteriol. 185 2003 2635 2643
-
(2003)
J. Bacteriol.
, vol.185
, pp. 2635-2643
-
-
Rice, K.C.1
Firek, B.A.2
Nelson, J.B.3
Yang, S.J.4
Patton, T.G.5
Bayles, K.W.6
-
145
-
-
0034960958
-
Evidence for holin function of tcdE gene in the pathogenicity of Clostridium difficile
-
K.S. Tan, B.Y. Wee, and K.P. Song Evidence for holin function of tcdE gene in the pathogenicity of Clostridium difficile J. Med. Microbiol. 50 2001 613 619
-
(2001)
J. Med. Microbiol.
, vol.50
, pp. 613-619
-
-
Tan, K.S.1
Wee, B.Y.2
Song, K.P.3
-
146
-
-
0035231423
-
The ESAT-6 gene cluster of Mycobacterium tuberculosis and other high G+C Gram-positive bacteria
-
N.C. Gey Van Pittius, J. Gamieldien, W. Hide, G.D. Brown, R.J. Siezen, and A.D. Beyers The ESAT-6 gene cluster of Mycobacterium tuberculosis and other high G+C Gram-positive bacteria Genome Biol. 2 2001 0044.1 0044.18
-
(2001)
Genome Biol.
, vol.2
, pp. 00441-004418
-
-
Gey Van Pittius, N.C.1
Gamieldien, J.2
Hide, W.3
Brown, G.D.4
Siezen, R.J.5
Beyers, A.D.6
-
147
-
-
0028966384
-
Purification and characterization of a low-molecular-mass t-cell antigen secreted by Mycobacterium tuberculosis
-
A.L. Sørensen, S. Nagai, G. Houen, P. Andersen, and A.B. Andersen Purification and characterization of a low-molecular-mass t-cell antigen secreted by Mycobacterium tuberculosis Infect. Immun. 63 1995 1710 1717
-
(1995)
Infect. Immun.
, vol.63
, pp. 1710-1717
-
-
Sørensen, A.L.1
Nagai, S.2
Houen, G.3
Andersen, P.4
Andersen, A.B.5
-
148
-
-
0142059794
-
The primary mechanism of attenuation of bacillus Calmette-Guerin is a loss of secreted lytic function required for invasion of lung interstitial tissue
-
T. Hsu, S.M. Hingley-Wilson, B. Chen, M. Chen, A.Z. Dai, P.M. Morin, C.B. Marks, J. Padiyar, C. Goulding, M. Gingery, D. Eisenberg, R.G. Russell, S.C. Derrick, F.M. Collins, S.L. Morris, C.H. King, and W.R. Jacobs Jr. The primary mechanism of attenuation of bacillus Calmette-Guerin is a loss of secreted lytic function required for invasion of lung interstitial tissue Proc. Natl. Acad. Sci. U. S. A. 100 2003 12420 12425
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 12420-12425
-
-
Hsu, T.1
Hingley-Wilson, S.M.2
Chen, B.3
Chen, M.4
Dai, A.Z.5
Morin, P.M.6
Marks, C.B.7
Padiyar, J.8
Goulding, C.9
Gingery, M.10
Eisenberg, D.11
Russell, R.G.12
Derrick, S.C.13
Collins, F.M.14
Morris, S.L.15
King, C.H.16
Jacobs Jr., W.R.17
-
150
-
-
0037321678
-
Bacterial signal transduction: A FHAscinating glimpse at the origins of phospho-dependent signal transduction
-
D. Durocher Bacterial signal transduction: a FHAscinating glimpse at the origins of phospho-dependent signal transduction Trends Microbiol. 11 2003 67 68
-
(2003)
Trends Microbiol.
, vol.11
, pp. 67-68
-
-
Durocher, D.1
-
151
-
-
0036966368
-
Bacterial FHA domains: Neglected players in the phospho-threonine signalling game?
-
M. Pallen, R. Chaudhuri, and A. Khan Bacterial FHA domains: neglected players in the phospho-threonine signalling game? Trends Microbiol. 11 2002 556 563
-
(2002)
Trends Microbiol.
, vol.11
, pp. 556-563
-
-
Pallen, M.1
Chaudhuri, R.2
Khan, A.3
-
152
-
-
0032817742
-
How many potentially secreted proteins are contained in a bacterial genome?
-
G. Schneider How many potentially secreted proteins are contained in a bacterial genome? Gene 237 1999 113 121
-
(1999)
Gene
, vol.237
, pp. 113-121
-
-
Schneider, G.1
-
153
-
-
0034821694
-
A proteomic view on genome-based signal peptide predictions
-
H. Antelmann, H. Tjalsma, B. Voigt, S. Ohlmeier, S. Bron, J.M. van Dijl, and M. Hecker A proteomic view on genome-based signal peptide predictions Genome Res. 11 2001 1484 1502
-
(2001)
Genome Res.
, vol.11
, pp. 1484-1502
-
-
Antelmann, H.1
Tjalsma, H.2
Voigt, B.3
Ohlmeier, S.4
Bron, S.5
Van Dijl, J.M.6
Hecker, M.7
-
155
-
-
0036061994
-
Proteins released during high toxin production in Clostridium difficile
-
K. Mukherjee, S. Karlsson, L.G. Burman, and T. Akerlund Proteins released during high toxin production in Clostridium difficile Microbiology 148 2002 2245 2253
-
(2002)
Microbiology
, vol.148
, pp. 2245-2253
-
-
Mukherjee, K.1
Karlsson, S.2
Burman, L.G.3
Akerlund, T.4
-
156
-
-
0036239635
-
Proteome and transciptome analysis of the virulence genes regulated by the VirR/VirS system in Clostridium perfringens
-
T. Shimizu, K. Shima, K.I. Yoshino, K. Yonezawa, T. Shimizu, and H. Hayashi Proteome and transciptome analysis of the virulence genes regulated by the VirR/VirS system in Clostridium perfringens J. Bacteriol. 184 2002 2587 2594
-
(2002)
J. Bacteriol.
, vol.184
, pp. 2587-2594
-
-
Shimizu, T.1
Shima, K.2
Yoshino, K.I.3
Yonezawa, K.4
Shimizu, T.5
Hayashi, H.6
-
157
-
-
0037224083
-
Genomics and bacterial metabolism
-
D.M. Downs Genomics and bacterial metabolism Curr. Issues Mol. Biol. 5 2003 17 25
-
(2003)
Curr. Issues Mol. Biol.
, vol.5
, pp. 17-25
-
-
Downs, D.M.1
-
158
-
-
2642540881
-
A microdomain for protein secretion in Gram-positive bacteria
-
J. Rosch, and M. Caparon A microdomain for protein secretion in Gram-positive bacteria Science 304 2004 1513 1515
-
(2004)
Science
, vol.304
, pp. 1513-1515
-
-
Rosch, J.1
Caparon, M.2
-
159
-
-
0036439069
-
The presence of a helix breaker in the hydrophobic core of signal sequences of secretory proteins prevents recognition by the signal-recognition particle in Escherichia coli
-
H. Adams, P.A. Scotti, H. De Cock, J. Luirink, and J. Tommassen The presence of a helix breaker in the hydrophobic core of signal sequences of secretory proteins prevents recognition by the signal-recognition particle in Escherichia coli Eur. J. Biochem. 269 2002 5564 5571
-
(2002)
Eur. J. Biochem.
, vol.269
, pp. 5564-5571
-
-
Adams, H.1
Scotti, P.A.2
De Cock, H.3
Luirink, J.4
Tommassen, J.5
-
160
-
-
22044442406
-
The cellulosome of Clostridium cellulolyticum
-
10.1016/j.enzmictec.2004.04.025
-
M. Desvaux The cellulosome of Clostridium cellulolyticum Enzyme Microb. Technol. 2005 10.1016/j.enzmictec.2004.04.025
-
(2005)
Enzyme Microb. Technol.
-
-
Desvaux, M.1
-
161
-
-
23744447992
-
Clostridium cellulolyticum: Model organism of mesophilic cellulolytic clostridia
-
10.1016/j.femsre.2004.11.003
-
M. Desvaux Clostridium cellulolyticum: model organism of mesophilic cellulolytic clostridia FEMS Microbiol. Rev. 2005 10.1016/j.femsre.2004.11.003
-
(2005)
FEMS Microbiol. Rev.
-
-
Desvaux, M.1
-
162
-
-
0034840478
-
The cellulosome and cellulose degradation by anaerobic bacteria
-
W.H. Schwarz The cellulosome and cellulose degradation by anaerobic bacteria Appl. Microbiol. Biotechnol. 56 2001 634 649
-
(2001)
Appl. Microbiol. Biotechnol.
, vol.56
, pp. 634-649
-
-
Schwarz, W.H.1
-
163
-
-
0842281609
-
The biology of Gram-positive sortase enzymes
-
G.K. Paterson, and T.J. Mitchell The biology of Gram-positive sortase enzymes Trends Microbiol. 12 2004 89 95
-
(2004)
Trends Microbiol.
, vol.12
, pp. 89-95
-
-
Paterson, G.K.1
Mitchell, T.J.2
-
164
-
-
0036845352
-
GW domains of the Listeria monocytogenes invasion protein InlB are SH3-like and mediate binding to host ligands
-
M. Marino, M. Banerjee, R. Jonquieres, P. Cossart, and P. Ghosh GW domains of the Listeria monocytogenes invasion protein InlB are SH3-like and mediate binding to host ligands EMBO J. 21 2002 5623 5634
-
(2002)
EMBO J.
, vol.21
, pp. 5623-5634
-
-
Marino, M.1
Banerjee, M.2
Jonquieres, R.3
Cossart, P.4
Ghosh, P.5
-
165
-
-
0035578330
-
The role of bacterial pili in protein and DNA translocation
-
R. Koebnik The role of bacterial pili in protein and DNA translocation Trends Microbiol. 9 2001 586 590
-
(2001)
Trends Microbiol.
, vol.9
, pp. 586-590
-
-
Koebnik, R.1
-
166
-
-
2042470134
-
Assembly of pili in Gram-positive bacteria
-
H. Ton-That, and O. Schneewind Assembly of pili in Gram-positive bacteria Trends Microbiol. 12 2004 228 234
-
(2004)
Trends Microbiol.
, vol.12
, pp. 228-234
-
-
Ton-That, H.1
Schneewind, O.2
-
167
-
-
0242360953
-
DNA transport during transformation
-
I. Chen, and D. Dubnau DNA transport during transformation Front. Biosci. 8 2003 s544 s556
-
(2003)
Front. Biosci.
, vol.8
-
-
Chen, I.1
Dubnau, D.2
-
168
-
-
3042596928
-
DNA uptake during bacterial transformation
-
I. Chen, and D. Dubnau DNA uptake during bacterial transformation Nat. Rev., Microbiol. 2 2004 241 249
-
(2004)
Nat. Rev., Microbiol.
, vol.2
, pp. 241-249
-
-
Chen, I.1
Dubnau, D.2
-
169
-
-
0036405357
-
Type 4 pili and twitching motility
-
J.S. Mattick Type 4 pili and twitching motility Annu. Rev. Microbiol. 56 2002 289 314
-
(2002)
Annu. Rev. Microbiol.
, vol.56
, pp. 289-314
-
-
Mattick, J.S.1
-
170
-
-
0031987114
-
Competence for natural transformation in Neisseria gonorrhoeae: A model system for studies of horizontal gene transfer
-
M. Koomey Competence for natural transformation in Neisseria gonorrhoeae: a model system for studies of horizontal gene transfer APMIS 84 1998 56 61
-
(1998)
APMIS
, vol.84
, pp. 56-61
-
-
Koomey, M.1
-
171
-
-
0032065412
-
Pathogenesis of Clostridium difficile infection
-
S.P. Borriello Pathogenesis of Clostridium difficile infection J. Antimicrob. Chemother. 41 1998 13 19
-
(1998)
J. Antimicrob. Chemother.
, vol.41
, pp. 13-19
-
-
Borriello, S.P.1
-
172
-
-
0034176517
-
Cloning, sequencing, and characterization of the gene encoding flagellin, flaC, and the post-translational modification of flagellin, FlaC, from Clostridium acetobutylicum ATCC824
-
M. Lyristis, Z.L. Boynton, D. Petersen, Z. Kan, G.N. Bennett, and F.B. Rudolph Cloning, sequencing, and characterization of the gene encoding flagellin, flaC, and the post-translational modification of flagellin, FlaC, from Clostridium acetobutylicum ATCC824 Anaerobe 6 2000 69 79
-
(2000)
Anaerobe
, vol.6
, pp. 69-79
-
-
Lyristis, M.1
Boynton, Z.L.2
Petersen, D.3
Kan, Z.4
Bennett, G.N.5
Rudolph, F.B.6
-
173
-
-
8544256328
-
Pathogenomics of non-pathogens
-
M. Holden, L. Crossman, A. Cerdeno-Taraga, and J. Parkhill Pathogenomics of non-pathogens Nat. Rev., Microbiol. 2 2004 91
-
(2004)
Nat. Rev., Microbiol.
, vol.2
, pp. 91
-
-
Holden, M.1
Crossman, L.2
Cerdeno-Taraga, A.3
Parkhill, J.4
-
174
-
-
10044239624
-
A novel genomics approach for the identification of drug targets in pathogens, with special reference to Pseudomonas aeruginosa
-
K.R. Sakharkar, M.K. Sakharkar, and V.T. Chow A novel genomics approach for the identification of drug targets in pathogens, with special reference to Pseudomonas aeruginosa In Silico Biol. 4 2004 0028
-
(2004)
In Silico Biol.
, vol.4
, pp. 0028
-
-
Sakharkar, K.R.1
Sakharkar, M.K.2
Chow, V.T.3
-
175
-
-
3142757398
-
Cellulosomes: Plant-cell-wall-degrading enzymes complexes
-
R.H. Doi, and A. Kosugi Cellulosomes: plant-cell-wall-degrading enzymes complexes Nat. Rev., Microbiol. 2 2004 541 551
-
(2004)
Nat. Rev., Microbiol.
, vol.2
, pp. 541-551
-
-
Doi, R.H.1
Kosugi, A.2
-
176
-
-
0344393521
-
Lytic transglycosylases in macromolecular transport systems of Gram-negative bacteria
-
G. Koraimann Lytic transglycosylases in macromolecular transport systems
-
(2003)
Cell. Mol. Life Sci.
, vol.60
, pp. 2371-2388
-
-
Koraimann, G.1
-
177
-
-
0034862658
-
Clostridial hydrolytic enzymes degrading extracellular components
-
O. Matsushita, and A. Okabe Clostridial hydrolytic enzymes degrading extracellular components Toxicon 39 2001 1769 1780
-
(2001)
Toxicon
, vol.39
, pp. 1769-1780
-
-
Matsushita, O.1
Okabe, A.2
-
178
-
-
0032748657
-
Clostridial toxins as therapeutic agents: Benefits of nature's most toxic proteins
-
E.A. Johnson Clostridial toxins as therapeutic agents: benefits of nature's most toxic proteins Annu. Rev. Microbiol. 53 1999 551 575
-
(1999)
Annu. Rev. Microbiol.
, vol.53
, pp. 551-575
-
-
Johnson, E.A.1
-
179
-
-
0030923446
-
Botulinum toxin: From poison to remedy
-
K.R. Kessler, and R. Benecke Botulinum toxin: from poison to remedy Neurotoxicology 18 1997 761 770
-
(1997)
Neurotoxicology
, vol.18
, pp. 761-770
-
-
Kessler, K.R.1
Benecke, R.2
-
180
-
-
0028844617
-
Chemotherapeutic tumor targeting using clostridial spores
-
N.P. Minton, M.L. Mauchline, M.J. Lemmon, J.K. Brehm, M. Fox, N.P. Michael, A. Giaccia, and J.M. Brown Chemotherapeutic tumor targeting using clostridial spores FEMS Microbiol. Rev. 17 1995 357 364
-
(1995)
FEMS Microbiol. Rev.
, vol.17
, pp. 357-364
-
-
Minton, N.P.1
Mauchline, M.L.2
Lemmon, M.J.3
Brehm, J.K.4
Fox, M.5
Michael, N.P.6
Giaccia, A.7
Brown, J.M.8
-
181
-
-
1842613536
-
Clostridia in cancer therapy
-
N.P. Minton Clostridia in cancer therapy Nat. Rev., Microbiol. 1 2003 237 242
-
(2003)
Nat. Rev., Microbiol.
, vol.1
, pp. 237-242
-
-
Minton, N.P.1
-
182
-
-
0032144380
-
Colonisation of Clostridium in the body is restricted to hypoxic and necrotic areas of tumours
-
P. Lambina, J. Theysb, W. Landuyta, P. Rijkenc, A. Van der Kogelc, E. Van der Schuerena, R. Hodgkissd, J. Fowlera, S. Nuytsb, E. De Bruijna, L. Van Mellaertb, and J. Anné Colonisation of Clostridium in the body is restricted to hypoxic and necrotic areas of tumours Anaerobe 4 1998 183 188
-
(1998)
Anaerobe
, vol.4
, pp. 183-188
-
-
Lambina, P.1
Theysb, J.2
Landuyta, W.3
Rijkenc, P.4
Van Der Kogelc, A.5
Van Der Schuerena, E.6
Hodgkissd, R.7
Fowlera, J.8
Nuytsb, S.9
De Bruijna, E.10
Van Mellaertb, L.11
Anné, J.12
-
183
-
-
0035909908
-
Combination bacteriolytic therapy for the treatment of experimental tumors
-
L.H. Dang, C. Bettegowda, D.L. Huso, K.W. Kinzler, and B. Vogelstein Combination bacteriolytic therapy for the treatment of experimental tumors Proc. Natl. Acad. Sci. U. S. A. 98 2001 15155 15160
-
(2001)
Proc. Natl. Acad. Sci. U. S. A.
, vol.98
, pp. 15155-15160
-
-
Dang, L.H.1
Bettegowda, C.2
Huso, D.L.3
Kinzler, K.W.4
Vogelstein, B.5
-
184
-
-
0035552380
-
Clostridium as a tumor-specific delivery system of therapeutic proteins
-
J. Theys, A.W. Landuyt, S. Nuyts, L. Van Mellaert, P. Lambin, J. Anne, and W. Landuyt Clostridium as a tumor-specific delivery system of therapeutic proteins Cancer Detect. Prev. 25 2001 548 557
-
(2001)
Cancer Detect. Prev.
, vol.25
, pp. 548-557
-
-
Theys, J.1
Landuyt, A.W.2
Nuyts, S.3
Van Mellaert, L.4
Lambin, P.5
Anne, J.6
Landuyt, W.7
-
185
-
-
0036185916
-
Clostridium spores for tumor-specific drug delivery
-
S. Nuyts, L. Van Mellaert, J. Theys, W. Landuyt, P. Lambin, and J. Anne Clostridium spores for tumor-specific drug delivery Anticancer Drugs 13 2002 115 125
-
(2002)
Anticancer Drugs
, vol.13
, pp. 115-125
-
-
Nuyts, S.1
Van Mellaert, L.2
Theys, J.3
Landuyt, W.4
Lambin, P.5
Anne, J.6
-
186
-
-
0032830180
-
Stable Escherichia coli-Clostridium acetobutylicum shuttle vector for secretion of murine tumor necrosis factor alpha
-
J. Theys, S. Nuyts, W. Landuyt, L. Van Mellaert, C. Dillen, M. Bohringer, P. Durre, P. Lambin, and J. Anne Stable Escherichia coli-Clostridium acetobutylicum shuttle vector for secretion of murine tumor necrosis factor alpha Appl. Environ. Microbiol. 65 1999 4295 4300
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 4295-4300
-
-
Theys, J.1
Nuyts, S.2
Landuyt, W.3
Van Mellaert, L.4
Dillen, C.5
Bohringer, M.6
Durre, P.7
Lambin, P.8
Anne, J.9
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