Cloning, sequencing, and characterization of the gene encoding flagellin, flaC, and the post-translational modification of flagellin, FlaC, from Clostridium acetobutylicum ATCC824

Anaerobe

Volumn 6, Issue 2, 2000, Pages 69-79

  Lyristis, Michael ^a   Boynton, Zhuang L ^a   Petersen, Daniel ^a   Kan, Zehngyan ^a   Bennett, George N ^a   Rudolph, Frederick B ^a  

^a RICE UNIVERSITY   (United States)

Author keywords

Clostridium acetobutylicum; flaC; Flagellin; Glycosylation; Post translation modification

Indexed keywords

FLAGELLIN; SIALIDASE; SOLVENT;

AMINO ACID SEQUENCE; ARTICLE; CLOSTRIDIUM ACETOBUTYLICUM; GENE SEQUENCE; GLYCOSYLATION; IMMUNOBLOTTING; MOLECULAR CLONING; MOLECULAR WEIGHT; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN ANALYSIS; PROTEIN PROCESSING; START CODON; STRUCTURAL GENE;

BACTERIA (MICROORGANISMS); CLOSTRIDIUM ACETOBUTYLICUM; PROKARYOTA;

EID: 0034176517     PISSN: 10759964     EISSN: None     Source Type: Journal    
DOI: 10.1006/anae.1999.0311     Document Type: Article

References (57)

1. Jones D. T., Woods D. R. Acetone-butanol fermentation revisited. Microbiol Rev. 50:1986;484-524
2. Dürre P., Fischer R. J., Kuhn A., Lorenz K., Schreiber W., Sturzenhofecker B., Ullmann S., Winzer K., Sauer U. Solventogenic enzymes of Clostridium acetobutylicum: catalytic properties, genetic organization, and transcriptional regulation. FEMS Microbiol Rev. 17:1995;251-262
3. Cornillot E., Nair R. V., Papoutsakis E. T., Soucaille P. The genes for butonal and acetone formation in Clostridium acetobutylicum ATCC 824 reside on a large plasmid whose loss leads to degeneration of the strain. J. Bacteriol. 179:1997;5442-5447
4. Hartmanis M. F.N., Gatenbeck S. Intermediary metabolism in Clostridium acetobutylicum: levels of enzymes involved in the formation of acetate and butyrate. Appl Environ Microbiol. 47:1984;1277-1283
5. Andersch W., Bahl H., Gottschalk G. Level of enzymes involved in acetate, butyrate, acetone and butanol formation by Clostridium acetobutylicum. Eur J Appl Microbiol. 18:1983;327-332
6. Girbal L., Soucaille P. Regulation of solvent production in Clostridium acetobutylicum. Trends Biotechnol. 16:1998;11-16
7. Gutierrez N. A., Maddox I. S. Role of chemotaxis in solvent production by Clostridium acetobutylicum. Appl Environ Microbiol. 53:1987;1924-1927
8. Gutierrez N. A., Maddox I. S. The effect of some culture maintenance and inoculum development techniques on solvent production by Clostridium acetobutylicum. Can J Microbiol. 33:1987;82-84
9. Gutierrez N. A., Maddox I. S. Isolation and partial characterization of a non-motile mutant of Clostridium accetobutylicum. Biotechnol Lett. 12:1990;853-856
10. Petersen D. J., Bennett G. N. Enzymatic characterization of a nonmotile, Nosolventogenic Clostridium acetobutylicum ATCC 824 mutant. Curr Microbiol. 23:1991;253-258
11. Petersen D. J., Bennett G. N. Cloning of the Clostridium acetobutylicum flagellin gene (fliC). American Society for Microbiology, National Meeting, Dallas, TX. Abstract:1991;I-83
12. Stim K., Boynton Z. L., Petersen D. J., Bennett G. N. Analysis of the acetyl coenzyme A acetyl transferase (Thiolase; EC 2.3.1.9) and flagellin genes of Clostridium acetobutylicum ATCC 824. 94th General Meeting of American Society for Microbiology, Las Vegas, NV. Abstract:1994;039
13. Messner P. Bacterial glycoproteins. Glyconj J. 14:1997;3-11
14. Moens S., Vanderleyden J. Glycoproteins in prokaryotes. Arch Microbiol. 168:1997;169-175
15. Brimer C. D., Montie T. C. Cloning and comparison of fliC genes and identification of glycosylation in the flagellin of Pseudomonas aeruginosa a-type strains. J. Bacteriol. 180:1998;3209-3217
16. Kelly-Wintenberg K., Anderson T., Montie T. C. Phosphorylated tyrosine in the flagellum filament protein of Pseudomonas aeruginosa. J. Bacteriol. 172:1990;5135-5139
17. Kelly-Wintenberg K., Anderson T., Montie T. C. Tyrosine phosphatase in a- and b-type flagelllins of Pseudomonas aeruginosa. J Bacteriol. 175:1993;2458-2461
18. Doig P., Kinsella N., Guerry P., Trust T. J. Characterization of a post-translational modification of Campylobacter flagellin: identification of a sero-specific glycosyl moiety. Mol Microbiol. 19:1996;379-387
19. Karn J., Brenner S., Barnett L., Cesareni G. Novel bacteriophage lambda cloning vector. Proc Natl Acad Sci USA. 77:1980;5172-5176
20. Bullock W. O., Fernandez J. M., Short J. M. XLl-Blue: a high efficiency plasmid transforming recA Escherichia coli strain with beta-galactosidase selection. Bio Techniques. 5:1987;376-379
21. Yanisch-Perron C., Vieira J., Messing J. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene. 33:1985;103-119
22. Moens S., Michiels K., Vanderleyden J. Glycosylation of the flagellin of the polar flagellum of Azospirillum brasilense, a gram-negative nitrogen-fixing bacterium. Microbiol. 141:1995;2651-2657
23. Arnold F., Bédouet L., Batina P., Robreau G., Talbot F., Lécher P., Malcoste R. Biochemical and immunological analyses of the flagellin of Clostridium tryobutyricum ATCC 25755. Microbiol Immunol. 42:1998;23-31
24. Bédouet L., Arnold F., Robreau G., Batina P., Talbot F., Malcoste R. Partial analysis of the flagellar antigenic determinant recognized by a monoclonal antibody to Clostridium tyrobutyricum. Microbiol Immunol. 42:1998;87-95
25. Wieland F., Heitzer R., Schaefer W. Asparaginylglycose: novel type of carbohydrate linkage. Proc Natl Acad Sci USA. 80:1983;5470-5474
26. Wieland F., Paul G., Sumper M. Halobacterial flagellins are sulfated glycoproteins. J Biol Chem. 260:1985;15180-15185
27. Miller J. H. Experiments in Molecular Genetics. 1972;Cold Spring Harbor Laboratory, Cold Spring Harbor
28. Sambrook J., Fritsch E. F., Maniatis T. Molecular cloning: a laboratory manual. 1989;Cold Spring Harbor Laboratory Press, Cold Spring Harbor
29. McLaughlin J. K., Meyer C. L., Papoutsakis E. T. Gas chromatography and gateway sensors for on-line state estimation of complex fermentations (butanol-acetone fermentation). Biotechnol Bioeng. 37:1985;1246-1257
30. Roos J. W., McLaughlin K., Papoutaskis E. T. The effect of pH on nitrogen supply, cell lysis, and solvent production in fermentations of Clostridium acetobutylicum. Biotechnol Bioeng. 27:1985;681-694
31. Oultram J. D., Peck H., Brehm J. K., Thompson D. E., Swinfield T. J., Minton N. P. Introduction of genes for leucine biosynthesis from Clostridium pasteurianum into C. acetobutylicum by cointegrate conjugal transfer. Mol Gen Genet. 214:1988;177-179
32. Chung C.T., Miller R.H. A rapid and convenient method for the preparation and storage of competent bacterial cells. Nucleic Acids Res. 16:1988;3580
33. Raleigh L. A. RbCl transformation procedure for improved efficiency. N Engl Biolabs Transcript. 6:1984;7
34. Birnboim H. C., Doly J. A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res. 7:1979;1513-1523
35. Cary J. W., Petersen D. J., Papoutsakis E. T., Bennett G. N. Cloning and expression of Clostridium acetobutylicum phosphotransbutyralse and butyrate kinase genes inEscherichia coli. J Bacteriol. 170:1988;4613-4618
36. Bartlett D. H., Frantz B. B., Matsumura P. Flagellar transcriptional activators FlbB and FlaI: gene sequences and 5′ consensus sequences of operons under FibB and FlaI control. J Bacteriol. 170:1998;1575-1581
37. Totten P. A., Lory S. Characterization of the type of flagellin gene from Pseudomonas aeruginosa PAK. J Bacteriol. 172:1990;7188-7199
38. Ohnishi K., Kutsukake K., Suzuki H., Iino T. Gene fliA encodes an alternative sigma factor specific for flagellar operons in Salmonella typhimurium. Mol Gen Genet. 221:1990;139-147
39. Sanger F., Nicklen S., Coulson A. R. DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA. 74:1977;5463-5467
40. Walter K. A., Bennett G. N., Papoutsakis E. T. Molecular characterization of two Clostridium acetobutylicum ATCC 824 butanol dehydrogenase isoenzyme genes. J Bacteriol. 174:1992;7149-7158
41. Laemmli U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 227:1970;680-685
42. Towbin H., Staehelin T., Gordon J. Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: Procedure and some applications. Proc Natl Acad Sci USA. 76:1979;4350-4354
43. Kniep B., Mühlradt P. F. Immunochemical detection of glycosphingolipids on thin-layer chromatograms. Anal Biochem. 188:1990;5-8
44. O'Shannessy D. J., Voorstad P. J., Quarles R. H. Quantitation of glycoproteins on electroblots using the biotin-streptavidin complex. Anal Biochem. 163:1987;204-209
45. Sakamoto Y., Sutherland K. J., Tamaoka J., Kobayashi T., Kudo T., Horikoshi K. Analysis of the flagellin (hag) gene of alkalophilic Bacillus sp. C-125. J Gen Microbiol. 138:1992;2159-2166
46. Martin J. H., Savage D. C. Cloning, nucleotide sequence, and taxonomic implications of the flagellin gene of Roseburia cecicola. J Bacteriol. 170:1988;2612-2617
47. LaVallie E. R., Stahl M. L. Cloning of the flagellin gene from Bacillus subtilis and complementation studies of an in vitro-derived deletion mutation. J Bacteriol. 171:1989;3085-3094
48. Norris S. J., Charon N. W., Cook R. G., Fuentes M. D., Limberger R. J. Antigenic relatedness and N-terminal sequence homology define two classes of periplasmic flagellar proteins ofTreponema pallidum subsp. pallidum and Treponema phagedenis. J Bacteriol. 170:1988;4072-4082
49. Pallesen L., Hindersson P. Cloning and sequencing of a Treponema pallidum gene encoding a 31.3-kilodalton endoflagellar subunit (FlaB2). Infect Immun. 57:1989;2166-2172
50. Guerry P., Alm R. A., Power M. E., Logan S. M., Trust T. J. Role of two flagellin genes in Campylobacter motility. J Bacteriol. 173:1991;4757-4764
51. Moens S., Michiels K., Keijers V., Van Leuven F., Vanderleyden J. Cloning, sequencing, and phenotypic analysis of laf l, encoding the flagellin of the lateral flagella ofAzospirillum brasilense Sp7. J Bacteriol. 177:1995;5419-5426
52. Gerl L., Sumper M. Halobacterial flagellins are encoded by a multigene family. Characterization of five flagellin genes. J Biol Chem. 263:1988;13246-13251
53. Helmann J. D., Chamberlain M. J. DNA sequence analysis suggests that expression of flagellar and chemotaxis genes in Escherichia coli andSalmonella typhimurium is controlled by and alternative σ factor. Proc Natl Acad Sci USA. 84:1984;6422-6424
54. Helmann J. D. Alternative sigma factors and the regulation of flagellar gene expression. Mol Microbiol. 5:1991;2875-2882
55. Marshall R. D. Glycoproteins. Annu Rev Biochem. 41:1972;673-702
56. Virji M., Saunders J. R., Sims G., Makepeace K., Maskell D., Ferguson D. J.P. Pilus-facilitated adherence of Neisseria meningitidis to human epithelial and endothelial cells: modulation of adherence phenotype occurs concurrently with changes in primary amino acid sequence and the glycosylation status of pilin. Mol Microbiol. 41:1993;371-374
57. Power M. E., Guerry P., McCubbin W. D., Kay C. M., Trust T. J. Structural and antigenic characteristics of Campylobacter coli FlaA flagellin. J Bacteriol. 176:1994;3303-3313