Interfacial inhibitors of protein-nucleic acid interactions

Current Medicinal Chemistry - Anti-Cancer Agents

Volumn 5, Issue 4, 2005, Pages 421-429

  Pommier, Yves ^a   Marchand, Christophe ^a  

^a NATIONAL CANCER INSTITUTE   (United States)

Author keywords

Allosteric inhibitors; Amanitin; Antibiotics; Camptothecin; Pharmacology; Ribosome; RNA polymerase; Topoisomerases

Indexed keywords

ALPHA AMANITIN; ANTHRACYCLINE; ANTIBIOTIC AGENT; ANTIINFECTIVE AGENT; ANTINEOPLASTIC AGENT; CAMPTOTHECIN; CAMPTOTHECIN DERIVATIVE; CIPROFLOXACIN; CYCLOHEXIMIDE; DACTINOMYCIN; DNA TOPOISOMERASE (ATP HYDROLYSING); DNA TOPOISOMERASE INHIBITOR; DOXORUBICIN; ELLIPTICINE DERIVATIVE; EPIPODOPHYLLOTOXIN; ETOPOSIDE; FUSIDIC ACID; GYRASE INHIBITOR; HYGROMYCIN B; IMATINIB; IRINOTECAN; MOCIMYCIN; NORFLOXACIN; NUCLEIC ACID; PACLITAXEL; PACTAMYCIN; QUINOLINE DERIVED ANTIINFECTIVE AGENT; RNA POLYMERASE; STREPTOMYCIN; TAMOXIFEN CITRATE; TENIPOSIDE; TETRACYCLINE; THIOSTREPTON; TOPOTECAN; TRASTUZUMAB;

ARTICLE; BACTERIAL GENETICS; COLORECTAL CARCINOMA; DRUG APPROVAL; DRUG BINDING; DRUG BINDING SITE; DRUG CONFORMATION; DRUG ISOLATION; DRUG MECHANISM; DRUG SELECTIVITY; DRUG STRUCTURE; DRUG SYNTHESIS; DRUG TARGETING; ENZYME INHIBITION; HUMAN; INHIBITION KINETICS; LUNG SMALL CELL CANCER; NONHUMAN; OVARY CARCINOMA; PROTEIN NUCLEIC ACID INTERACTION;

ANIMALS; DNA TOPOISOMERASES, TYPE II; DNA-BINDING PROTEINS; HUMANS; NUCLEIC ACIDS; RIBOSOMES; RNA POLYMERASE II;

EID: 22144486601     PISSN: 15680118     EISSN: None     Source Type: Journal    
DOI: 10.2174/1568011054222337     Document Type: Article

References (65)

1. Pommier, Y. and Cherfils, J. Trends. Pharmacol. Sci., 2005, 28, 136.
2. Monod, J., Changeux, J.P. and Jacob, F. J. Mol. Biol., 1963, 6, 306.
3. Christopoulos, A. Nat. Rev. Drug Discov., 2002, 1, 198.
4. Wall, M.E. and Wani, M.C. Cancer Res., 1995, 55, 753.
5. Hsiang, Y.H., Hertzberg, R., Hecht, S. and Liu, L.F. J. Biol. Chem., 1985, 260, 14873.
6. Bjornsti, M.-A., Benedetti, P., Viglianti, G.A. and Wang, J.C. Cancer Res., 1989, 49, 6318.
7. Jaxel, C., Kohn, K.W., Wani, M.C., Wall, M.E. and Pommier, Y. Cancer Res., 1989, 49, 1465.
8. Jaxel, C., Capranico, G., Kerrigan, D., Kohn, K.W. and Pommier, Y. J. Biol. Chem., 1991, 266, 20418.
9. Covey, J.M., Jaxel, C., Kohn, K.W. and Pommier, Y. Cancer Res., 1989, 49, 5016.
10. Tanizawa, A., Kohn, K.W., Kohlhagen, G., Leteurtre, F. and Pommier, Y. Biochemistry, 1995, 34, 7200.
11. Wang, J.C. Nat. Rev. Mol. Cell. Biol., 2002, 3, 430.
12. Champoux, J.J. Annu. Rev. Biochem, 2001, 70, 369.
13. Pommier, Y., Kohlhagen, G., Kohn, F., Leteurtre, F., Wani, M.C. and Wall, M.E. Proc. Natl. Acad. Sci. U.S.A., 1995, 92, 8861.
14. Pommier, Y., Pourquier, P., Urasaki, Y., Wu, J. and Laco, G. Drug Resistance Update, 1999, 2, 307.
15. Chrencik, J.E., Staker, B.L., Burgin, A.B., Pourquier, P., Pommier, Y., Stewart, L. and Redinbo, M.R. J. Mol. Biol., 2004, 339, 773.
16. Staker, B.L., Hjerrild, K., Feese, M.D., Behnke, C.A., Burgin, A.B., Jr. and Stewart, L. Proc. Natl. Acad. Sci. U. S. A., 2002, 99, 15387.
17. Staker, B.L., Feese, M.D., Cushman, M., Pommier, Y., Zembower, D., Stewart, L. and Burgin, A.B. Submitted, 2004.
18. Ross, W.E., Glaubiger, D. and Kohn, K.W. Biochim. Biophys. Acta, 1979, 562, 41.
19. Pommier, Y., Schwartz, R.E., Kohn, K.W. and Zwelling, L.A. Biochemistry, 1984, 23, 3194.
20. Kohn, K.W. Cancer Res., 1996, 56, 5533.
21. Tewey, K.M., Chen, G.L., Nelson, E.M. and Liu, L.F. J. Biol. Chem., 1984, 259, 9182.
22. Chen, G.L., Yang, L., Rowe, T.C., Halligan, B.D., Tewey, K.M. and Liu, L.F. J. Biol. Chem., 1984, 259, 13560.
23. Minford, J., Pommier, Y., Filipski, J., Kohn, K.W., Kerrigan, D., Mattern, M., Michaels, S., Schwartz, R. and Zwelling, L.A. Biochemistry, 1986, 25, 9.
24. Capranico, G., Kohn, K.W. and Pommier, Y. Nucleic Acids Res., 1990, 18, 6611.
25. Pommier, Y., Capranico, G., Orr, A. and Kohn, K.W. Nucleic Acids Res., 1991, 19, 5973.
26. Pommier, Y., Fesen, M.R. and Goldwasser, F. Topoisomerase II inhibitors: the epipodophyllotoxins, m-AMSA, and the ellipticine derivatives. In: B. A. Chabner and D. L. Longo (eds.), Cancer chemotherapy and biotherapy: principles and practice, 2nd edition, Philadelphia: Lippincott - Raven, 1996, pp. 435.
27. Capranico, G. and Binaschi, M. Biochim. Biophys. Acta, 1998, 1400, 185.
28. Heddle, J. and Maxwell, A. Antimicrob. Agents Chemother., 2002, 46, 1805.
29. Classen, S., Olland, S. and Berger, J.M. Proc. Natl. Acad. Sci. U. S. A., 2003, 100, 10629.
30. Wieland, T. and Faulstich, H. Experientia, 1991, 47, 1186.
31. Gong, X.Q., Nedialkov, Y.A. and Burton, Z.F. J. Biol. Chem., 2004, 279, 27422.
32. Bushnell, D.A., Cramer, P. and Kornberg, R.D. Proc. Natl. Acad. Sci. U. S. A., 2002, 99, 1218.
33. Gnatt, A.L., Cramer, P., Fu, J., Bushnell, D.A. and Kornberg, R.D. Science, 2001, 292, 1876.
34. Chafin, D.R., Guo, H. and Price, D.H. J. Biol. Chem., 1995, 270, 19114.
35. Gu, W., Powell, W., Mote, J., Jr. and Reines, D. J. Biol. Chem., 1993, 268, 25604.
36. Rudd, M.D. and Luse, D.S. J. Biol. Chem., 1996, 271, 21549.
37. Zanotti, G., Mohringer, C. and Wieland, T. Int. J. Pept. Protein Res., 1987, 30, 450.
38. Liu, X., Chen, H. and Patel, D.J. J. Biomol. NMR, 1991, 1, 323.
39. Seither, P., Zatsepina, O., Hoffmann, M. and Grummt, I. Chromosoma, 1997, 106, 216.
40. Ogle, J.M., Carter, A.P. and Ramakrishnan, V. Trends. Biochem. Sci., 2003, 28, 259.
41. Brodersen, D.E., Clemons, W.M. Jr., Carter, A.P., Morgan-Warren, R.J., Wimberly, B.T. and Ramakrishnan, V. Cell, 2000, 103, 1143.
42. Agrawal, R.K. and Frank, J. Curr. Opin. Struct. Biol., 1999, 9, 215.
43. Laurberg, M., Kristensen, O., Martemyanov, K., Gudkov, A.T., Nagaev, I., Hughes, D. and Liljas, A. J. Mol. Biol., 2000, 303, 593.
44. Bowen, W.S., Van Dyke, N., Murgola, E.J., Lodmell, J.S. and Hill, W.E. J. Biol. Chem., 2004.
45. Pommier, Y. and Marchand, C. Curr. Med. Chem., 2005, In. press.
46. Roca, J., Ishida, R., Berger, J.M., Andoh, T. and Wang, J.C. Proc. Natl. Acad. Sci. U.S.A., 1994, 91, 1781.
47. Heddle, J.G., Barnard, F.M., Wentzell, L.M. and Maxwell, A. Nucleosides. Nucleotides. Nucleic Acids, 2000, 19, 1249.
48. Strumberg, D., Nitiss, J.L., Dong, J., Walker, J., Nicklaus, M.C., Kohn, K.W., Heddle, J.G., Maxwell, A., Seeber, S. and Pommier, Y. Antimicrob. Agents Chemother., 2002, 46, 2735.
49. Takebayashi, Y., Pourquier, P., Zimonjic, D.B., Nakayama, K., Emmert, S., Ueda, T., Urasaki, Y., Kanzaki, A., Akiyama, S.I., Popescu, N., Kraemer, K.H. and Pommier, Y. Nat. Med., 2001, 7, 961.
50. Huberman, J.A. Cell, 1981, 23, 647.
51. Hazuda, D.J., Felock, P., Witmer, M., Wolfe, A., Stillmock, K., Grobler, J.A., Espesath, A., Gabryelski, L., Schlelf, W., Blau, C. and Miller, M.D. Science, 2000, 287, 646.
52. Marchand, C., Johnson, A.A., Karki, R.G., Pais, G.C., Zhang, X., Cowansage, K., Patel, T.A., Nicklaus, M.C., Burke, T.R. Jr. and Pommier, Y. Mol. Pharmacol., 2003, 64, 600.
53. Renault, L., Guibert, B. and Cherfils, J. Nature, 2003, 426, 525.
54. Mossessova, E., Corpina, R.A. and Goldberg, J. Mol. Cell, 2003, 12, 1403.
55. Jin, L. and Harrison, S.C. Proc. Natl. Acad. Sci. U S. A., 2002, 99, 13522.
56. Huai, Q., Kim, H.Y., Liu, Y., Zhao, Y., Mondragon, A., Liu, J.O. and Ke, H. Proc. Natl. Acad. Sci. U. S. A., 2002, 99, 12037.
57. Kissinger, C.R., Parge, H.E., Knighton, D.R., Lewis, C.T., Pelletier, L.A., Tempczyk, A., Kalish, V.J., Tucker, K.D., Showalter, R.E., Moomaw, E.W. and et al. Nature, 1995, 378, 641.
58. Griffith, J.P., Kim, J.L., Kim, E.E., Sintchak, M.D., Thomson, J.A., Fitzgibbon, M.J., Fleming, M.A., Caron, P.R., Hsiao, K. and Navia, M.A. Cell, 1995, 82, 507.
59. Tesmer, J.J., Sunahara, R.K., Gilman, A.G. and Sprang, S.R. Science, 1997, 278, 1907.
60. Wurtele, M., Jelich-Ottmann, C., Wittinghofer, A. and Oecking, C. EMBO J., 2003, 22, 987.
61. Choi, J., Chen, J., Schreiber, S.L. and Clardy, J. Science, 1996, 273, 239.
62. Ravelli, R.B., Gigant, B., Curmi, P.A., Jourdain, I., Lachkar, S., Sobel, A. and Knossow, M. Nature, 2004, 428, 198.
63. Snyder, J.P., Nettles, J.H., Cornett, B., Downing, K.H. and Nogales, E. Proc. Natl. Acad Sci. U. S. A., 2001, 98, 5312.
64. Nettles, J.H., Li, H., Cornett, B., Krahn, J.M., Snyder, J.P. and Downing, K.H. Science, 2004, 305, 866.
65. Berger, J.M. Biochim. Biophys. Acta, 1998, 1400, 3.