-
1
-
-
0032906637
-
Salmonella SirA is a global regulator of genes mediating enteropathogenesis
-
Ahmer, B. M., J. van Reeuwijk, P. R. Watson, T. S. Wallis, and F. Heffron. 1999. Salmonella SirA is a global regulator of genes mediating enteropathogenesis. Mol. Microbiol. 31:971-982.
-
(1999)
Mol. Microbiol.
, vol.31
, pp. 971-982
-
-
Ahmer, B.M.1
Van Reeuwijk, J.2
Watson, P.R.3
Wallis, T.S.4
Heffron, F.5
-
2
-
-
0037244545
-
AraC/XylS family members, HilD and HilC, directly activate virulence gene expression independently of HilA in Salmonella lyphimurium
-
Akbar, S., L. M. Schechter, C. P. Lostroh, and C. A. Lee. 2003. AraC/XylS family members, HilD and HilC, directly activate virulence gene expression independently of HilA in Salmonella lyphimurium. Mol. Microbiol. 47:715-728.
-
(2003)
Mol. Microbiol.
, vol.47
, pp. 715-728
-
-
Akbar, S.1
Schechter, L.M.2
Lostroh, C.P.3
Lee, C.A.4
-
3
-
-
0033972539
-
Characterization of two novel regulatory genes affecting Salmonella invasion gene expression
-
Altier, C., M. Suyemoto, A. I. Ruiz, K. D. Burnham, and R. Maurer. 2000. Characterization of two novel regulatory genes affecting Salmonella invasion gene expression. Mol. Microbiol. 35:635-646.
-
(2000)
Mol. Microbiol.
, vol.35
, pp. 635-646
-
-
Altier, C.1
Suyemoto, M.2
Ruiz, A.I.3
Burnham, K.D.4
Maurer, R.5
-
4
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
5
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., T. L. Madden, A. A. Schaffer, J. H. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.H.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
6
-
-
0037303198
-
Functional determinants of transcription factors in Escherichia coli: Protein families and binding sites
-
Babu, M. M., and S. A. Teichmann. 2003. Functional determinants of transcription factors in Escherichia coli: protein families and binding sites. Trends Genet. 19:75-79.
-
(2003)
Trends Genet.
, vol.19
, pp. 75-79
-
-
Babu, M.M.1
Teichmann, S.A.2
-
7
-
-
0029416946
-
HilA is a novel OmpR/ToxR family member that activates the expression of Salmonella typhimurium invasion genes
-
Bajaj, V., C. Hwang, and C. A. Lee. 1995. HilA is a novel OmpR/ToxR family member that activates the expression of Salmonella typhimurium invasion genes. Mol. Microbiol. 18:715-727.
-
(1995)
Mol. Microbiol.
, vol.18
, pp. 715-727
-
-
Bajaj, V.1
Hwang, C.2
Lee, C.A.3
-
8
-
-
0029828325
-
Co-ordinate regulation of Salmonella typhimurium invasion genes by environmental and regulatory factors is mediated by control of hilA expression
-
Bajaj, V., R. L. Lucas, C. Hwang, and C. A. Lee. 1996. Co-ordinate regulation of Salmonella typhimurium invasion genes by environmental and regulatory factors is mediated by control of hilA expression. Mol. Microbiol. 22:703-714.
-
(1996)
Mol. Microbiol.
, vol.22
, pp. 703-714
-
-
Bajaj, V.1
Lucas, R.L.2
Hwang, C.3
Lee, C.A.4
-
9
-
-
0037371179
-
HilE interacts with HilD and negatively regulates hilA transcription and expression of the Salmonella enterica serovar Typhimurium invasive phenotype
-
Baxter, M. A., T. F. Fahlen, R. L. Wilson, and B. D. Jones. 2003. HilE interacts with HilD and negatively regulates hilA transcription and expression of the Salmonella enterica serovar Typhimurium invasive phenotype. Infect. Immun. 71:1295-1305.
-
(2003)
Infect. Immun.
, vol.71
, pp. 1295-1305
-
-
Baxter, M.A.1
Fahlen, T.F.2
Wilson, R.L.3
Jones, B.D.4
-
10
-
-
0027323056
-
A PhoP-repressed gene promotes Salmonella typhimurium invasion of epithelial cells
-
Behlau, I., and S. I. Miller. 1993. A PhoP-repressed gene promotes Salmonella typhimurium invasion of epithelial cells. J. Bacteriol. 175:4475-4484.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 4475-4484
-
-
Behlau, I.1
Miller, S.I.2
-
11
-
-
0036081345
-
GenBank
-
Benson, D. A., I. Karsch-Mizrachi, D. J. Lipman, J. Ostell, B. A. Rapp, and D. L. Wheeler. 2002. GenBank. Nucleic Acids Res. 30:17-20.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 17-20
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Rapp, B.A.5
Wheeler, D.L.6
-
12
-
-
1842431886
-
Lon protease activity causes down-regulation of Salmonella pathogenicity island 1 invasion gene expression after infection of epithelial cells
-
Boddicker, J. D., and B. D. Jones. 2004. Lon protease activity causes down-regulation of Salmonella pathogenicity island 1 invasion gene expression after infection of epithelial cells. Infect. Immun. 72:2002-2013.
-
(2004)
Infect. Immun.
, vol.72
, pp. 2002-2013
-
-
Boddicker, J.D.1
Jones, B.D.2
-
13
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
14
-
-
0020510718
-
Salmonella typhimurium LT2 strains which are r- M+ for all three chromosomally located systems of DNA restriction and modification
-
Bullas, L. R., and J. I. Ryu. 1983. Salmonella typhimurium LT2 strains which are r- m+ for all three chromosomally located systems of DNA restriction and modification. J. Bacteriol. 156:471-474.
-
(1983)
J. Bacteriol.
, vol.156
, pp. 471-474
-
-
Bullas, L.R.1
Ryu, J.I.2
-
15
-
-
0036229497
-
Examination of Salmonella gene expression in an infected mammalian host using the green fluorescent protein and two-colour flow cytometry
-
Bumann, D. 2002. Examination of Salmonella gene expression in an infected mammalian host using the green fluorescent protein and two-colour flow cytometry. Mol. Microbiol. 43:1269-1283.
-
(2002)
Mol. Microbiol.
, vol.43
, pp. 1269-1283
-
-
Bumann, D.1
-
16
-
-
0016064933
-
The route of enteric infection in normal mice
-
Carter, P. B., and F. M. Collins. 1974. The route of enteric infection in normal mice. J. Exp. Med. 139:1189-1203.
-
(1974)
J. Exp. Med.
, vol.139
, pp. 1189-1203
-
-
Carter, P.B.1
Collins, F.M.2
-
17
-
-
0037224655
-
Genomic comparison of Salmonella enterica serovars and Salmonella bongori by use of an S. enterica serovar Typhimurium DNA microarray
-
Chan, K., S. Baker, C. C. Kim, C. S. Detweiler, G. Dougan, and S. Falkow. 2003. Genomic comparison of Salmonella enterica serovars and Salmonella bongori by use of an S. enterica serovar Typhimurium DNA microarray. J. Bacteriol. 185:553-563.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 553-563
-
-
Chan, K.1
Baker, S.2
Kim, C.C.3
Detweiler, C.S.4
Dougan, G.5
Falkow, S.6
-
18
-
-
17044444528
-
Antibacterial effect of the adhering human Lactobacillus acidophilus strain LB
-
Coconnier, M. H., V. Lievin, M. F. Bernet-Camard, S. Hudault, and A. L. Servin. 1997. Antibacterial effect of the adhering human Lactobacillus acidophilus strain LB. Antimicrob. Agents Chemother. 41:1046-1052.
-
(1997)
Antimicrob. Agents Chemother.
, vol.41
, pp. 1046-1052
-
-
Coconnier, M.H.1
Lievin, V.2
Bernet-Camard, M.F.3
Hudault, S.4
Servin, A.L.5
-
19
-
-
0042622369
-
INCLUSive: A web portal and service registry for microarray and regulatory sequence analysis
-
Coessens, B., G. Thijs, S. Aerts, K. Marchal, F. De Smet, K. Engelen, P. Glenisson, Y. Moreau, J. Mathys, and B. De Moor. 2003. INCLUSive: A web portal and service registry for microarray and regulatory sequence analysis. Nucleic Acids Res. 31:3468-3470.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3468-3470
-
-
Coessens, B.1
Thijs, G.2
Aerts, S.3
Marchal, K.4
De Smet, F.5
Engelen, K.6
Glenisson, P.7
Moreau, Y.8
Mathys, J.9
De Moor, B.10
-
20
-
-
0026003072
-
Control site location and transcriptional regulation in Escherichia coli
-
Collado-Vides, J., B. Magasanik, and J. D. Gralla. 1991. Control site location and transcriptional regulation in Escherichia coli. Microbiol. Rev. 55: 371-394.
-
(1991)
Microbiol. Rev.
, vol.55
, pp. 371-394
-
-
Collado-Vides, J.1
Magasanik, B.2
Gralla, J.D.3
-
21
-
-
0027236904
-
Regulation of the Salmonella typhimurium metF gene by the MetR protein
-
Cowan, J. M., M. L. Urbanowski, M. Talmi, and G. V. Stauffer. 1993. Regulation of the Salmonella typhimurium metF gene by the MetR protein. J. Bacteriol. 175:5862-5866.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 5862-5866
-
-
Cowan, J.M.1
Urbanowski, M.L.2
Talmi, M.3
Stauffer, G.V.4
-
22
-
-
0032875042
-
InvF is required for expression of genes encoding proteins secreted by the SPI1 type III secretion apparatus in Salmonella typhimurium
-
Darwin, K. H., and V. L. Miller. 1999. InvF is required for expression of genes encoding proteins secreted by the SPI1 type III secretion apparatus in Salmonella typhimurium. J. Bacteriol. 181:4949-4954.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 4949-4954
-
-
Darwin, K.H.1
Miller, V.L.2
-
23
-
-
0032802267
-
Molecular basis of the interaction of Salmonella with the intestinal mucosa
-
Darwin, K. H., and V. L. Miller. 1999. Molecular basis of the interaction of Salmonella with the intestinal mucosa. Clin. Microbiol. Rev. 12:405-428.
-
(1999)
Clin. Microbiol. Rev.
, vol.12
, pp. 405-428
-
-
Darwin, K.H.1
Miller, V.L.2
-
24
-
-
0033954608
-
The putative invasion protein chaperone SicA acts together with InvF to activate the expression of Salmonella typhimurium virulence genes
-
Darwin, K. H., and V. L. Miller. 2000. The putative invasion protein chaperone SicA acts together with InvF to activate the expression of Salmonella typhimurium virulence genes. Mol. Microbiol. 35:949-959.
-
(2000)
Mol. Microbiol.
, vol.35
, pp. 949-959
-
-
Darwin, K.H.1
Miller, V.L.2
-
25
-
-
0035901560
-
Type III secretion chaperone-dependent regulation: Activation of virulence genes by SicA and InvF in Salmonella typhimurium
-
Darwin, K. H., and V. L. Miller. 2001. Type III secretion chaperone-dependent regulation: activation of virulence genes by SicA and InvF in Salmonella typhimurium. EMBO J. 20:1850-1862.
-
(2001)
EMBO J.
, vol.20
, pp. 1850-1862
-
-
Darwin, K.H.1
Miller, V.L.2
-
26
-
-
0242349603
-
Secretion of the orgC gene product by Salmonella enterica serovar Typhimurium
-
Day, J. B., and C. A. Lee. 2003. Secretion of the orgC gene product by Salmonella enterica serovar Typhimurium. Infect. Immun. 71:6680-6685.
-
(2003)
Infect. Immun.
, vol.71
, pp. 6680-6685
-
-
Day, J.B.1
Lee, C.A.2
-
28
-
-
0036080361
-
Adaptive quality-based clustering of gene expression profiles
-
De Smet, F., J. Mathys, K. Marchal, G. Thijs, B. De Moor, and Y. Moreau. 2002. Adaptive quality-based clustering of gene expression profiles. Bioinformatics 18:735-746.
-
(2002)
Bioinformatics
, vol.18
, pp. 735-746
-
-
De Smet, F.1
Mathys, J.2
Marchal, K.3
Thijs, G.4
De Moor, B.5
Moreau, Y.6
-
29
-
-
0038687632
-
virK, somA and rcsC are important for systemic Salmonella enterica serovar Typhimurium infection and cationic peptide resistance
-
Detweiler, C. S., D. M. Monack, I. E. Brodsky, H. Mathew, and S. Falkow. 2003. virK, somA and rcsC are important for systemic Salmonella enterica serovar Typhimurium infection and cationic peptide resistance. Mol. Microbiol. 48:385-400.
-
(2003)
Mol. Microbiol.
, vol.48
, pp. 385-400
-
-
Detweiler, C.S.1
Monack, D.M.2
Brodsky, I.E.3
Mathew, H.4
Falkow, S.5
-
30
-
-
0033855169
-
Expression of the hilA Salmonella typhimurium gene in a poultry Salmonella enteritidis isolate in response to lactate and nutrients
-
Durant, J. A., D. E. Corrier, L. H. Stanker, and S. C. Ricke. 2000. Expression of the hilA Salmonella typhimurium gene in a poultry Salmonella enteritidis isolate in response to lactate and nutrients. J. Appl. Microbiol. 89:63-69.
-
(2000)
J. Appl. Microbiol.
, vol.89
, pp. 63-69
-
-
Durant, J.A.1
Corrier, D.E.2
Stanker, L.H.3
Ricke, S.C.4
-
31
-
-
0033839161
-
Salmonella enteritidis hilA gene fusion response after incubation in spent media from either S. enteritidis or a poultry Lactobacillus strain
-
Durant, J. A., D. E. Corrier, L. H. Stanker, and S. C. Ricke. 2000. Salmonella enteritidis hilA gene fusion response after incubation in spent media from either S. enteritidis or a poultry Lactobacillus strain. J. Environ. Sci. Health B. 35:599-610.
-
(2000)
J. Environ. Sci. Health B
, vol.35
, pp. 599-610
-
-
Durant, J.A.1
Corrier, D.E.2
Stanker, L.H.3
Ricke, S.C.4
-
32
-
-
0032765129
-
Differential regulation of Salmonella typhimurium type III secreted proteins by pathogenicity island 1 (SPI-1)-encoded transcriptional activators InvF and HilA
-
Eichelberg, K., and J. E. Galan. 1999. Differential regulation of Salmonella typhimurium type III secreted proteins by pathogenicity island 1 (SPI-1)-encoded transcriptional activators InvF and HilA. Infect. Immun. 67:4099-4105.
-
(1999)
Infect. Immun.
, vol.67
, pp. 4099-4105
-
-
Eichelberg, K.1
Galan, J.E.2
-
33
-
-
0033047687
-
Characterization of SprA, an AraC-like transcriptional regulator encoded within the Salmonella typhimurium pathogenicity island 1
-
Eichelberg, K., W. D. Hardt, and J. E. Galan. 1999. Characterization of SprA, an AraC-like transcriptional regulator encoded within the Salmonella typhimurium pathogenicity island 1. Mol. Microbiol. 33:139-152.
-
(1999)
Mol. Microbiol.
, vol.33
, pp. 139-152
-
-
Eichelberg, K.1
Hardt, W.D.2
Galan, J.E.3
-
34
-
-
0033031437
-
DNA arrays for analysis of gene expression
-
Eisen, M. B., and P. O. Brown. 1999. DNA arrays for analysis of gene expression. Methods Enzymol. 303:179-205.
-
(1999)
Methods Enzymol.
, vol.303
, pp. 179-205
-
-
Eisen, M.B.1
Brown, P.O.2
-
35
-
-
0041888342
-
RtsA and RtsB coordinately regulate expression of the invasion and flagellar genes in Salmonella enterica serovar Typhimurium
-
Ellermeier, C. D., and J. M. Slauch. 2003. RtsA and RtsB coordinately regulate expression of the invasion and flagellar genes in Salmonella enterica serovar Typhimurium. J. Bacteriol. 185:5096-5108.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 5096-5108
-
-
Ellermeier, C.D.1
Slauch, J.M.2
-
36
-
-
0038613020
-
MARAN: Normalizing micro-array data
-
Engelen, K., B. Coessens, K. Marchal, and B. De Moor. 2003. MARAN: normalizing micro-array data. Bioinformatics 19:893-894.
-
(2003)
Bioinformatics
, vol.19
, pp. 893-894
-
-
Engelen, K.1
Coessens, B.2
Marchal, K.3
De Moor, B.4
-
37
-
-
85048645444
-
Identification and characterization of mutants with increased expression of hilA, the invasion gene transcriptional activator of Salmonella typhimurium
-
Fahlen, T. F., N. Mathur, and B. D. Jones. 2000. Identification and characterization of mutants with increased expression of hilA, the invasion gene transcriptional activator of Salmonella typhimurium. FEMS Immunol. Med. Microbiol. 28:25-35.
-
(2000)
FEMS Immunol. Med. Microbiol.
, vol.28
, pp. 25-35
-
-
Fahlen, T.F.1
Mathur, N.2
Jones, B.D.3
-
38
-
-
0034751820
-
Hha is a negative modulator of transcription of hilA, the Salmonella enterica serovar Typhimurium invasion gene transcriptional activator
-
Fahlen, T. F., R. L. Wilson, J. D. Boddicker, and B. D. Jones. 2001. Hha is a negative modulator of transcription of hilA, the Salmonella enterica serovar Typhimurium invasion gene transcriptional activator. J. Bacteriol. 183: 6620-6629.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 6620-6629
-
-
Fahlen, T.F.1
Wilson, R.L.2
Boddicker, J.D.3
Jones, B.D.4
-
40
-
-
84985161098
-
Probiotics in man and animals
-
Fuller, R. 1989. Probiotics in man and animals. J. Appl. Bacteriol. 66:365-378.
-
(1989)
J. Appl. Bacteriol.
, vol.66
, pp. 365-378
-
-
Fuller, R.1
-
41
-
-
0029879556
-
Molecular genetic bases of Salmonella entry into host cells
-
Galan, J. E. 1996. Molecular genetic bases of Salmonella entry into host cells. Mol. Microbiol. 20:263-271.
-
(1996)
Mol. Microbiol.
, vol.20
, pp. 263-271
-
-
Galan, J.E.1
-
42
-
-
0029671310
-
2+ as an extracellular signal: Environmental regulation of Salmonella virulence
-
2+ as an extracellular signal: environmental regulation of Salmonella virulence. Cell 84:165-174.
-
(1996)
Cell
, vol.84
, pp. 165-174
-
-
Garcia-Vescovi, E.1
Soncini, F.C.2
Groisman, E.A.3
-
43
-
-
0035105303
-
The pleiotropic two-component regulatory system PhoP-PhoQ
-
Groisman, E. A. 2001. The pleiotropic two-component regulatory system PhoP-PhoQ. J. Bacteriol. 183:1835-1842.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 1835-1842
-
-
Groisman, E.A.1
-
45
-
-
0019407618
-
Aromatic-dependent Salmonella typhimurium are non-virulent and effective as live vaccines
-
Hoiseth, S. K., and B. A. Stocker. 1981. Aromatic-dependent Salmonella typhimurium are non-virulent and effective as live vaccines. Nature 291:238-239.
-
(1981)
Nature
, vol.291
, pp. 238-239
-
-
Hoiseth, S.K.1
Stocker, B.A.2
-
46
-
-
0032054355
-
Host-microbial symbiosis in the mammalian intestine: Exploring an internal ecosystem
-
Hooper, L. V., L. Bry, P. G. Falk, and J. I. Gordon. 1998. Host-microbial symbiosis in the mammalian intestine: exploring an internal ecosystem. Bioessays 20:336-343.
-
(1998)
Bioessays
, vol.20
, pp. 336-343
-
-
Hooper, L.V.1
Bry, L.2
Falk, P.G.3
Gordon, J.I.4
-
47
-
-
0343376470
-
Antagonistic activity exerted in vitro and in vivo by Lactobacillus casei (strain GG) against Salmonella typkimuritim C5 infection
-
Hudault, S., V. Lievin, M. F. Bernet-Camard, and A. L. Servin. 1997. Antagonistic activity exerted in vitro and in vivo by Lactobacillus casei (strain GG) against Salmonella typkimuritim C5 infection. Appl. Environ. Microbiol. 63:513-518.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 513-518
-
-
Hudault, S.1
Lievin, V.2
Bernet-Camard, M.F.3
Servin, A.L.4
-
48
-
-
0034968684
-
A flagellar gene fliZ regulates the expression of invasion genes and virulence phenotype in Salmonella enterica serovar Typhimurium
-
Iyoda, S., T. Kamidoi, K. Hirose, K. Kutsukake, and H. Watanabe. 2001. A flagellar gene fliZ regulates the expression of invasion genes and virulence phenotype in Salmonella enterica serovar Typhimurium. Microb. Pathog. 30:81-90.
-
(2001)
Microb. Pathog.
, vol.30
, pp. 81-90
-
-
Iyoda, S.1
Kamidoi, T.2
Hirose, K.3
Kutsukake, K.4
Watanabe, H.5
-
49
-
-
0029828326
-
Transcriptional activation of Salmonella typhimurium invasion genes by a member of the phosphorylated response-regulator superfamily
-
Johnston, C., D. A. Pegues, C. J. Hueck, A. Lee, and S. I. Miller. 1996. Transcriptional activation of Salmonella typhimurium invasion genes by a member of the phosphorylated response-regulator superfamily. Mol. Microbiol. 22:715-727.
-
(1996)
Mol. Microbiol.
, vol.22
, pp. 715-727
-
-
Johnston, C.1
Pegues, D.A.2
Hueck, C.J.3
Lee, A.4
Miller, S.I.5
-
50
-
-
0028214086
-
Salmonella typhimurium initiates murine infection by penetrating and destroying the specialized epithelial M cells of the Peyer's patches
-
Jones, B. D., N. Ghori, and S. Falkow. 1994. Salmonella typhimurium initiates murine infection by penetrating and destroying the specialized epithelial M cells of the Peyer's patches. J. Exp. Med. 180:15-23.
-
(1994)
J. Exp. Med.
, vol.180
, pp. 15-23
-
-
Jones, B.D.1
Ghori, N.2
Falkow, S.3
-
51
-
-
0029059332
-
Homologs of the Shigella IpaB and IpaC invasins are required for Salmonella typhimurium entry into cultured epithelial cells
-
Kaniga, K., S. Tucker, D. Trollinger, and J. E. Galan. 1995. Homologs of the Shigella IpaB and IpaC invasins are required for Salmonella typhimurium entry into cultured epithelial cells. J. Bacteriol. 177:3965-3971.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 3965-3971
-
-
Kaniga, K.1
Tucker, S.2
Trollinger, D.3
Galan, J.E.4
-
52
-
-
0035979259
-
Bootstrapping cluster analysis: Assessing the reliability of conclusions from microarray experiments
-
Kerr, M. K., and G. A. Churchill. 2001. Bootstrapping cluster analysis: assessing the reliability of conclusions from microarray experiments. Proc. Natl. Acad. Sci. USA 98:8961-8965.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 8961-8965
-
-
Kerr, M.K.1
Churchill, G.A.2
-
53
-
-
0035032570
-
Statistical design and the analysis of gene expression microarray data
-
Kerr, M. K., and G. A. Churchill. 2001. Statistical design and the analysis of gene expression microarray data. Genet. Res. 77:123-128.
-
(2001)
Genet. Res.
, vol.77
, pp. 123-128
-
-
Kerr, M.K.1
Churchill, G.A.2
-
54
-
-
0034927555
-
Analysis of variance for gene expression microarray data
-
Kerr, M. K., M. Martin, and G. A. Churchill. 2000. Analysis of variance for gene expression microarray data. J. Comput. Biol. 7:819-837.
-
(2000)
J. Comput. Biol.
, vol.7
, pp. 819-837
-
-
Kerr, M.K.1
Martin, M.2
Churchill, G.A.3
-
55
-
-
0027912333
-
Detecting subtle sequence signals: A Gibbs sampling strategy for multiple alignment
-
Lawrence, C. E., S. F. Altschul, M. S. Boguski, J. S. Liu, A. F. Neuwald, and J. C. Wootton. 1993. Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment. Science 262:208-214.
-
(1993)
Science
, vol.262
, pp. 208-214
-
-
Lawrence, C.E.1
Altschul, S.F.2
Boguski, M.S.3
Liu, J.S.4
Neuwald, A.F.5
Wootton, J.C.6
-
56
-
-
0025334009
-
The ability of Salmonella to enter mammalian cells is affected by bacterial growth state
-
Lee, C. A., and S. Falkow. 1990. The ability of Salmonella to enter mammalian cells is affected by bacterial growth state. Proc. Natl. Acad. Sci. USA 87:4304-4308.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 4304-4308
-
-
Lee, C.A.1
Falkow, S.2
-
57
-
-
0030811659
-
Inhibition of Salmonella typhimurium adhesion to Caco-2 cell cultures by Lactobacillus strain GG spent culture supernate: Only a pH effect?
-
Lehto, E. M., and S. J. Salminen. 1997. Inhibition of Salmonella typhimurium adhesion to Caco-2 cell cultures by Lactobacillus strain GG spent culture supernate: only a pH effect? FEMS Immunol. Med. Microbiol. 18:125-132.
-
(1997)
FEMS Immunol. Med. Microbiol.
, vol.18
, pp. 125-132
-
-
Lehto, E.M.1
Salminen, S.J.2
-
58
-
-
0027120805
-
Broad host range plasmids carrying the Escherichia coli lactose and galactose operons
-
Lodge, J., J. Fear, S. Busby, P. Gunasekaran, and N. R. Kamini. 1992. Broad host range plasmids carrying the Escherichia coli lactose and galactose operons. FEMS Microbiol. Lett. 74:271-276.
-
(1992)
FEMS Microbiol. Lett.
, vol.74
, pp. 271-276
-
-
Lodge, J.1
Fear, J.2
Busby, S.3
Gunasekaran, P.4
Kamini, N.R.5
-
59
-
-
0033929352
-
The cis requirements for transcriptional activation by HilA, a virulence determinant encoded on SPI-1
-
Lostroh, C. P., V. Bajaj, and C. A. Lee. 2000. The cis requirements for transcriptional activation by HilA, a virulence determinant encoded on SPI-1. Mol. Microbiol. 37:300-315.
-
(2000)
Mol. Microbiol.
, vol.37
, pp. 300-315
-
-
Lostroh, C.P.1
Bajaj, V.2
Lee, C.A.3
-
60
-
-
0034900919
-
The HilA box and sequences outside it determine the magnitude of HilA-dependent activation of P-prgH from Salmonella pathogenicity island 1
-
Lostroh, C. P., and C. A. Lee. 2001. The HilA box and sequences outside it determine the magnitude of HilA-dependent activation of P-prgH from Salmonella pathogenicity island 1. J. Bacteriol. 183:4876-4885.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 4876-4885
-
-
Lostroh, C.P.1
Lee, C.A.2
-
61
-
-
0035675991
-
The Salmonella pathogenicity island-l type III secretion system
-
Lostroh, C. P., and C. A. Lee. 2001. The Salmonella pathogenicity island-l type III secretion system. Microbes. Infect. 3:1281-1291.
-
(2001)
Microbes. Infect.
, vol.3
, pp. 1281-1291
-
-
Lostroh, C.P.1
Lee, C.A.2
-
62
-
-
0034994144
-
Pathologic and physiologic interactions of bacteria with the gastrointestinal epithelium
-
Lu, L., and W. A. 2001. Walker. Pathologic and physiologic interactions of bacteria with the gastrointestinal epithelium. Am. J. Clin. Nutr. 73:1124S-1130S.
-
(2001)
Am. J. Clin. Nutr.
, vol.73
-
-
Lu, L.1
Walker, W.A.2
-
63
-
-
0034034613
-
Unravelling the mysteries of virulence gene regulation in Salmonella typhimurium
-
Lucas, R. L., and C. A. Lee. 2000. Unravelling the mysteries of virulence gene regulation in Salmonella typhimurium. Mol. Microbiol. 36:1024-1033.
-
(2000)
Mol. Microbiol.
, vol.36
, pp. 1024-1033
-
-
Lucas, R.L.1
Lee, C.A.2
-
64
-
-
0035048857
-
Roles of hilC and MID in regulation of HilA expression in Salmonella enterica serovar Typhimurium
-
Lucas, R. L., and C. A. Lee. 2001. Roles of hilC and MID in regulation of HilA expression in Salmonella enterica serovar Typhimurium. J. Bacteriol. 183:2733-2745.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 2733-2745
-
-
Lucas, R.L.1
Lee, C.A.2
-
65
-
-
0034106676
-
Multiple factors independently regulate hilA and invasion gene expression in Salmonella enterica serovar Typhimurium
-
Lucas, R. L., C. P. Lostroh, C. C. DiRusso, M. P. Spector, B. L. Wanner, and C. A. Lee. 2000. Multiple factors independently regulate hilA and invasion gene expression in Salmonella enterica serovar Typhimurium. J. Bacteriol. 182:1872-1882.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 1872-1882
-
-
Lucas, R.L.1
Lostroh, C.P.2
Dirusso, C.C.3
Spector, M.P.4
Wanner, B.L.5
Lee, C.A.6
-
66
-
-
0030861452
-
Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/ I1-I2 regulatory elements
-
Lutz, R., and H. Bujard. 1997. Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/ I1-I2 regulatory elements. Nucleic Acids Res. 25:1203-1210.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 1203-1210
-
-
Lutz, R.1
Bujard, H.2
-
67
-
-
0037323120
-
Genome-specific higher-order background models to improve motif detection
-
Marchal, K., G. Thijs, S. De Keersmaecker, P. Monsieurs, B. De Moor, and J. Vanderleyden. 2003. Genome-specific higher-order background models to improve motif detection. Trends Microbiol. 11:61-66.
-
(2003)
Trends Microbiol.
, vol.11
, pp. 61-66
-
-
Marchal, K.1
Thijs, G.2
De Keersmaecker, S.3
Monsieurs, P.4
De Moor, B.5
Vanderleyden, J.6
-
68
-
-
0031029852
-
Stochastic mechanisms in gene expression
-
McAdams, H. H., and A. Arkin. 1997. Stochastic mechanisms in gene expression. Proc. Natl. Acad. Sci. USA 94:814-819.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 814-819
-
-
McAdams, H.H.1
Arkin, A.2
-
69
-
-
0035950182
-
Complete genome sequence of Salmonella enterica serovar Typhimurium LT2
-
McClelland, M., K. E. Sanderson, J. Spieth, S. W. Clifton, P. Latreille, L. Courtney, S. Porwollik, J. Ali, M. Dante, F. Y. Du, S. F. Hou, D. Layman, S. Leonard, C. Nguyen, K. Scott, A. Holmes, N. Grewal, E. Mulvaney, E. Ryan, H. Sun, L. Florea, W. Miller, T. Stoneking, M. Nhan, R. Waterston, and R. K. Wilson. 2001. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. Nature 413:852-856.
-
(2001)
Nature
, vol.413
, pp. 852-856
-
-
McClelland, M.1
Sanderson, K.E.2
Spieth, J.3
Clifton, S.W.4
Latreille, P.5
Courtney, L.6
Porwollik, S.7
Ali, J.8
Dante, M.9
Du, F.Y.10
Hou, S.F.11
Layman, D.12
Leonard, S.13
Nguyen, C.14
Scott, K.15
Holmes, A.16
Grewal, N.17
Mulvaney, E.18
Ryan, E.19
Sun, H.20
Florea, L.21
Miller, W.22
Stoneking, T.23
Nhan, M.24
Waterston, R.25
Wilson, R.K.26
more..
-
70
-
-
0034810591
-
SdiA of Salmonella enterica is a LuxR homolog that detects mixed microbial communities
-
Michael, B., J. N. Smith, S. Swift, F. Heffron, and B. M. M. Ahmer. 2001. SdiA of Salmonella enterica is a LuxR homolog that detects mixed microbial communities. J. Bacteriol. 183:5733-5742.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 5733-5742
-
-
Michael, B.1
Smith, J.N.2
Swift, S.3
Heffron, F.4
Ahmer, B.M.M.5
-
71
-
-
0003785155
-
-
Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
Miller, J. H. 1972. Experiments in molecular genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
(1972)
Experiments in Molecular Genetics
-
-
Miller, J.H.1
-
72
-
-
0001885217
-
Salmonella species, including Salmonella typhi
-
G. L. Mandell, J. E. Bennett, and R. Dolin (ed.). Churchill Livingstone, Philadelphia, Pa
-
Miller, S. I., and D. A. Pegues. 2000. Salmonella species, including Salmonella typhi, p. 2344-2363. In G. L. Mandell, J. E. Bennett, and R. Dolin (ed.), Principles and practice in infectious diseases. Churchill Livingstone, Philadelphia, Pa.
-
(2000)
Principles and Practice in Infectious Diseases
, pp. 2344-2363
-
-
Miller, S.I.1
Pegues, D.A.2
-
73
-
-
0013224530
-
Functional bioinformatics of microarray data: From expression to regulation
-
Moreau, Y., F. De Smet, G. Thijs, K. Marchal, and B. De Moor. 2002. Functional bioinformatics of microarray data: from expression to regulation. Proc. IEEE 90:1722-1743.
-
(2002)
Proc. IEEE
, vol.90
, pp. 1722-1743
-
-
Moreau, Y.1
De Smet, F.2
Thijs, G.3
Marchal, K.4
De Moor, B.5
-
74
-
-
8544223541
-
Identification of host-specific colonization factors of Salmonella enterica serovar Typhimurium
-
Morgan, E., J. D. Campbell, S. C. Rowe, J. Bispham, M. P. Stevens, A. J. Bowen, P. A. Barrow, D. J. Maskell, and T. S. Wallis. 2004. Identification of host-specific colonization factors of Salmonella enterica serovar Typhimurium. Mol. Microbiol. 54:994-1010.
-
(2004)
Mol. Microbiol.
, vol.54
, pp. 994-1010
-
-
Morgan, E.1
Campbell, J.D.2
Rowe, S.C.3
Bispham, J.4
Stevens, M.P.5
Bowen, A.J.6
Barrow, P.A.7
Maskell, D.J.8
Wallis, T.S.9
-
75
-
-
0142074778
-
Activation of hilA expression at low pH requires the signal sensor CpxA, but not the cognate response regulator CpxR, in Salmonella enterica serovar Typhimurium
-
Nakayama, S., A. Kushiro, T. Asahara, R. Tanaka, L. Hu, D. J. Kopecko, and H. Watanabe. 2003. Activation of hilA expression at low pH requires the signal sensor CpxA, but not the cognate response regulator CpxR, in Salmonella enterica serovar Typhimurium. Microbiology 149:2809-2817.
-
(2003)
Microbiology
, vol.149
, pp. 2809-2817
-
-
Nakayama, S.1
Kushiro, A.2
Asahara, T.3
Tanaka, R.4
Hu, L.5
Kopecko, D.J.6
Watanabe, H.7
-
77
-
-
0021402226
-
Construction of an E. coli strain overproducing the Tn10-encoded TET represser and its use for large scale purification
-
Oehmichen, R., G. Klock, L. Altschmied, and W. Hillen. 1984. Construction of an E. coli strain overproducing the Tn10-encoded TET represser and its use for large scale purification. EMBO J. 3:539-543.
-
(1984)
EMBO J.
, vol.3
, pp. 539-543
-
-
Oehmichen, R.1
Klock, G.2
Altschmied, L.3
Hillen, W.4
-
78
-
-
0036064691
-
DNA-binding activities of the HilC and HilD virulence regulatory proteins of Salmonella enterica serovar Typhimurium
-
Olekhnovich, I. N., and R. J. Kadner. 2002. DNA-binding activities of the HilC and HilD virulence regulatory proteins of Salmonella enterica serovar Typhimurium. J. Bacteriol. 184:4148-4160.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 4148-4160
-
-
Olekhnovich, I.N.1
Kadner, R.J.2
-
79
-
-
2342603963
-
Contribution of the RpoA C-terminal domain to stimulation of the Salmonella enterica hilA promoter by HilC and HilD
-
Olekhnovich, I. N., and R. J. Kadner. 2004. Contribution of the RpoA C-terminal domain to stimulation of the Salmonella enterica hilA promoter by HilC and HilD. J. Bacteriol. 186:3249-3253.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 3249-3253
-
-
Olekhnovich, I.N.1
Kadner, R.J.2
-
80
-
-
0025753361
-
Negative autoregulation of cysB in Salmonella typhimurium: In vitro interactions of CysB protein with the cysB promoter
-
Ostrowski, J., and N. M. Kredich. 1991. Negative autoregulation of cysB in Salmonella typhimurium: in vitro interactions of CysB protein with the cysB promoter. J. Bacteriol. 173:2212-2218.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 2212-2218
-
-
Ostrowski, J.1
Kredich, N.M.2
-
81
-
-
0029095837
-
PhoP/PhoQ transcriptional repression of Salmonella typhimurium invasion genes: Evidence for a role in protein secretion
-
Pegues, D. A., M. J. Hantman, I. Behlau, and S. I. Miller. 1995. PhoP/PhoQ transcriptional repression of Salmonella typhimurium invasion genes: evidence for a role in protein secretion. Mol. Microbiol. 17:169-181.
-
(1995)
Mol. Microbiol.
, vol.17
, pp. 169-181
-
-
Pegues, D.A.1
Hantman, M.J.2
Behlau, I.3
Miller, S.I.4
-
82
-
-
0002979653
-
Gene transfer in Gram-negative bacteria
-
P. Gerhardt, R. G. E. Murray, W. A. Wood, and N. R. Krieg (ed.). American Society for Microbiology, Washington, D.C.
-
Provence, D. L., and R. Curtiss. 1994. Gene transfer in Gram-negative bacteria, p. 317-347. In P. Gerhardt, R. G. E. Murray, W. A. Wood, and N. R. Krieg (ed.), Methods for general and molecular bacteriology. American Society for Microbiology, Washington, D.C.
-
(1994)
Methods for General and Molecular Bacteriology
, pp. 317-347
-
-
Provence, D.L.1
Curtiss, R.2
-
83
-
-
0032962415
-
A HilA-independent pathway to Salmonella typhimurium invasion gene transcription
-
Rakeman, J. L., H. R. Bonifleld, and S. I. Miller. 1999. A HilA-independent pathway to Salmonella typhimurium invasion gene transcription. J. Bacteriol. 181:3096-3104.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 3096-3104
-
-
Rakeman, J.L.1
Bonifleld, H.R.2
Miller, S.I.3
-
84
-
-
1842585421
-
Detection and characterization of the S. typhimurium HilA protein
-
Rodriguez, C. R., L. M. Schechter, and C. A. Lee. 2002. Detection and characterization of the S. typhimurium HilA protein. BMC Microbiol. 2:31.
-
(2002)
BMC Microbiol.
, vol.2
, pp. 31
-
-
Rodriguez, C.R.1
Schechter, L.M.2
Lee, C.A.3
-
85
-
-
0036428761
-
Negative autoregulation speeds the response times of transcription networks
-
Rosenfeld, N., M. B. Elowitz, and U. Alon. 2002. Negative autoregulation speeds the response times of transcription networks. J. Mol. Biol. 323:785-793.
-
(2002)
J. Mol. Biol.
, vol.323
, pp. 785-793
-
-
Rosenfeld, N.1
Elowitz, M.B.2
Alon, U.3
-
86
-
-
0034687702
-
A whole-genome microarray reveals genetic diversity among Helicobacter pylori strains
-
Salama, N., K. Guillemin, T. K. McDaniel, G. Sherlock, L. Tompkins, and S. Falkow. 2000. A whole-genome microarray reveals genetic diversity among Helicobacter pylori strains. Proc. Natl. Acad. Sci. USA 97:14668-14673.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 14668-14673
-
-
Salama, N.1
Guillemin, K.2
McDaniel, T.K.3
Sherlock, G.4
Tompkins, L.5
Falkow, S.6
-
87
-
-
0004136246
-
-
Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning, a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
(1989)
Molecular Cloning, a Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
89
-
-
0037280460
-
Pathogenesis of Salmonella-induced enteritis
-
Santos, R. L., R. M. Tsolis, A. J. Baumler, and L. G. Adams. 2003. Pathogenesis of Salmonella-induced enteritis. Braz. J. Med. Biol. Res. 36:3-12.
-
(2003)
Braz. J. Med. Biol. Res.
, vol.36
, pp. 3-12
-
-
Santos, R.L.1
Tsolis, R.M.2
Baumler, A.J.3
Adams, L.G.4
-
90
-
-
0032903582
-
Two AraC/XylS family members can independently counteract the effect of repressing sequences upstream of the hilA promoter
-
Schechter, L. M., S. M. Damrauer, and C. A. Lee. 1999. Two AraC/XylS family members can independently counteract the effect of repressing sequences upstream of the hilA promoter. Mol. Microbiol. 32:629-642.
-
(1999)
Mol. Microbiol.
, vol.32
, pp. 629-642
-
-
Schechter, L.M.1
Damrauer, S.M.2
Lee, C.A.3
-
91
-
-
0041322572
-
The small nucleoid-binding proteins H-NS, HU, and Fis affect hilA expression in Salmonella enterica serovar Typhimurium
-
Schechter, L. M., S. Jain, S. Akbar, and C. A. Lee. 2003. The small nucleoid-binding proteins H-NS, HU, and Fis affect hilA expression in Salmonella enterica serovar Typhimurium. Infect. Immun. 71:5432-5435.
-
(2003)
Infect. Immun.
, vol.71
, pp. 5432-5435
-
-
Schechter, L.M.1
Jain, S.2
Akbar, S.3
Lee, C.A.4
-
92
-
-
0034933621
-
AraC/XylS family members, HilC and HilD. Directly bind and derepress the Salmonella typhimurium hilA promoter
-
Schechter, L. M., and C. A. Lee. 2001. AraC/XylS family members, HilC and HilD. directly bind and derepress the Salmonella typhimurium hilA promoter. Mol. Microbiol. 40:1289-1299.
-
(2001)
Mol. Microbiol.
, vol.40
, pp. 1289-1299
-
-
Schechter, L.M.1
Lee, C.A.2
-
93
-
-
0036578795
-
Network motifs in the transcriptional regulation network of Escherichia coli
-
Shen-Orr, S. S., R. Milo, S. Mangan, and U. Alon. 2002. Network motifs in the transcriptional regulation network of Escherichia coli. Nat. Genet. 31: 64-68.
-
(2002)
Nat. Genet.
, vol.31
, pp. 64-68
-
-
Shen-Orr, S.S.1
Milo, R.2
Mangan, S.3
Alon, U.4
-
94
-
-
0001964638
-
The discovery of Lactobacillus GG
-
Sherwood, L., and M. D. Gorbach. 1996. The discovery of Lactobacillus GG. Nutr. Today 31:2S-4S.
-
(1996)
Nutr. Today
, vol.31
-
-
Sherwood, L.1
Gorbach, M.D.2
-
95
-
-
0023628787
-
Antimicrobial substance from a human Lactobacillus strain
-
Silva, M., N. V. Jacobus, C. Deneke, and S. L. Gorbach. 1987. Antimicrobial substance from a human Lactobacillus strain. Antimicrob. Agents Chemother. 31:1231-1233.
-
(1987)
Antimicrob. Agents Chemother.
, vol.31
, pp. 1231-1233
-
-
Silva, M.1
Jacobus, N.V.2
Deneke, C.3
Gorbach, S.L.4
-
96
-
-
0036135495
-
The ATP-dependent Lon protease of Salmonella enterica serovar Typhimurium regulates invasion and expression of genes carried on Salmonella pathogenicity island 1
-
Takaya, A., T. Tomoyasu, A. Tokumitsu, M. Morioka, and T. Yamamoto. 2002. The ATP-dependent Lon protease of Salmonella enterica serovar Typhimurium regulates invasion and expression of genes carried on Salmonella pathogenicity island 1. J. Bacteriol. 184:224-232.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 224-232
-
-
Takaya, A.1
Tomoyasu, T.2
Tokumitsu, A.3
Morioka, M.4
Yamamoto, T.5
-
97
-
-
0345529061
-
Pathways leading from BarA/SirA to motility and virulence gene expression in Salmonella
-
Teplitski, M., R. I. Goodier, and B. M. Ahmer. 2003. Pathways leading from BarA/SirA to motility and virulence gene expression in Salmonella. J. Bacteriol. 185:7257-7265.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 7257-7265
-
-
Teplitski, M.1
Goodier, R.I.2
Ahmer, B.M.3
-
98
-
-
0036137323
-
A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling
-
Thijs, G., M. Lescot, K. Marchal, S. Rombauts, B. De Moor, P. Rouze, and Y. Moreau. 2001. A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling. Bioinformatics 17: 1113-1122.
-
(2001)
Bioinformatics
, vol.17
, pp. 1113-1122
-
-
Thijs, G.1
Lescot, M.2
Marchal, K.3
Rombauts, S.4
De Moor, B.5
Rouze, P.6
Moreau, Y.7
-
99
-
-
0036108622
-
A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes
-
Thijs, G., K. Marchal, M. Lescot, S. Rombauts, B. De Moor, P. Rouze, and Y. Moreau. 2002. A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes. J. Comput. Biol. 9:447-464.
-
(2002)
J. Comput. Biol.
, vol.9
, pp. 447-464
-
-
Thijs, G.1
Marchal, K.2
Lescot, M.3
Rombauts, S.4
De Moor, B.5
Rouze, P.6
Moreau, Y.7
-
100
-
-
0036191009
-
INCLUSive: INtegrated clustering, upstream of sequence retrieval and motif sampling
-
Thijs, G., Y. Moreau, F. De Smet, J. Mathys, M. Lescot, S. Rombauts, P. Rouze, B. De Moor, and K. Marchal. 2002. INCLUSive: INtegrated clustering, upstream of sequence retrieval and motif sampling. Bioinformatics. 18:331-332.
-
(2002)
Bioinformatics
, vol.18
, pp. 331-332
-
-
Thijs, G.1
Moreau, Y.2
De Smet, F.3
Mathys, J.4
Lescot, M.5
Rombauts, S.6
Rouze, P.7
De Moor, B.8
Marchal, K.9
-
101
-
-
0034076811
-
Molecular basis of Salmonella-induced enteritis
-
Wallis, T. S., and E. E. Galyov. 2000. Molecular basis of Salmonella-induced enteritis. Mol. Microbiol. 36:997-1005.
-
(2000)
Mol. Microbiol.
, vol.36
, pp. 997-1005
-
-
Wallis, T.S.1
Galyov, E.E.2
-
102
-
-
0035181320
-
Fis, a DNA nucleoid-associated protein, is involved in Salmonella typhimurium SPI-1 invasion gene expression
-
Wilson, R. L., S. J. Libby, A. M. Freet, J. D. Boddicker, T. F. Fahlen, and B. D. Jones. 2001. Fis, a DNA nucleoid-associated protein, is involved in Salmonella typhimurium SPI-1 invasion gene expression. Mol. Microbiol. 39:79-88.
-
(2001)
Mol. Microbiol.
, vol.39
, pp. 79-88
-
-
Wilson, R.L.1
Libby, S.J.2
Freet, A.M.3
Boddicker, J.D.4
Fahlen, T.F.5
Jones, B.D.6
-
103
-
-
0031867250
-
Identification and sequence analysis of a 27-kilobase chromosomal fragment containing a Salmonella pathogenicity island located at 92 minutes on the chromosome map of Salmonella enterica serovar Typhimurium LT2
-
Wong, K. K., M. McClelland, L. C. Stillwell, E. C. Sisk, S. J. Thurston, and J. D. Saffer. 1998. Identification and sequence analysis of a 27-kilobase chromosomal fragment containing a Salmonella pathogenicity island located at 92 minutes on the chromosome map of Salmonella enterica serovar Typhimurium LT2. Infect. Immun. 66:3365-3371.
-
(1998)
Infect. Immun.
, vol.66
, pp. 3365-3371
-
-
Wong, K.K.1
McClelland, M.2
Stillwell, L.C.3
Sisk, E.C.4
Thurston, S.J.5
Saffer, J.D.6
-
104
-
-
0021943518
-
Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors
-
Yanisch-Perron, C., J. Vieira, and J. Messing. 1985. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103-119.
-
(1985)
Gene
, vol.33
, pp. 103-119
-
-
Yanisch-Perron, C.1
Vieira, J.2
Messing, J.3
-
105
-
-
0037219881
-
Molecular pathogenesis of Salmonella enterica serotype Typhimurium-induced diarrhea
-
Zhang, S., R. A. Kingsley, R. L. Santos, H. Andrews-Polymenis, M. Raffatellu, J. Figueiredo, J. Nunes, R. M. Tsolis, L. G. Adams, and A. J. Baumler. 2003. Molecular pathogenesis of Salmonella enterica serotype Typhimurium-induced diarrhea. Infect. Immun. 71:1-12.
-
(2003)
Infect. Immun.
, vol.71
, pp. 1-12
-
-
Zhang, S.1
Kingsley, R.A.2
Santos, R.L.3
Andrews-Polymenis, H.4
Raffatellu, M.5
Figueiredo, J.6
Nunes, J.7
Tsolis, R.M.8
Adams, L.G.9
Baumler, A.J.10
-
106
-
-
0035675043
-
Salmonella entry into host cells: The work in concert of type III secreted effector proteins
-
Zhou, D. G., and J. Galan. 2001. Salmonella entry into host cells: the work in concert of type III secreted effector proteins. Microbes Infect. 3:1293-1298.
-
(2001)
Microbes Infect.
, vol.3
, pp. 1293-1298
-
-
Zhou, D.G.1
Galan, J.2
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