-
1
-
-
0020489781
-
'Amount and distribution of 5-methylcytosine in human DNA from different types of tissues of cells'
-
Ehrlich, M., Gama-Sosa, M. A., Huang, L.H. et al. (1982), 'Amount and distribution of 5-methylcytosine in human DNA from different types of tissues of cells', Nucleic Acids Res., Vol. 10, pp. 2709-2721.
-
(1982)
Nucleic Acids Res.
, vol.10
, pp. 2709-2721
-
-
Ehrlich, M.1
Gama-Sosa, M.A.2
Huang, L.H.3
-
2
-
-
0021111964
-
'The 5-methylcytosine content of highly repeated sequences in human DNA'
-
Gama-Sosa, M. A., Wang, R. Y., Kuo, K. C. et al. (1983), 'The 5-methylcytosine content of highly repeated sequences in human DNA', Nucleic Acids Res., Vol. 11, pp. 3087-3095.
-
(1983)
Nucleic Acids Res.
, vol.11
, pp. 3087-3095
-
-
Gama-Sosa, M.A.1
Wang, R.Y.2
Kuo, K.C.3
-
3
-
-
0036733675
-
'Chromatin modification and epigenetic reprogramming in mammalian development'
-
Li, E. (2002), 'Chromatin modification and epigenetic reprogramming in mammalian development', Nat. Rev. Genet., Vol. 3, pp. 662-673.
-
(2002)
Nat. Rev. Genet.
, vol.3
, pp. 662-673
-
-
Li, E.1
-
4
-
-
0016439429
-
'DNA modification mechanisms and gene activity during development'
-
Holliday, R. and Pugh, J. E. (1975), 'DNA modification mechanisms and gene activity during development', Science, Vol. 187, pp. 226-232.
-
(1975)
Science
, vol.187
, pp. 226-232
-
-
Holliday, R.1
Pugh, J.E.2
-
5
-
-
0016692220
-
'X inactivation, differentiation, and DNA methylation'
-
Riggs, A. D. (1975), 'X inactivation, differentiation, and DNA methylation', Cytogenet. Cell Genet., Vol. 14, pp. 9-25.
-
(1975)
Cytogenet. Cell Genet.
, vol.14
, pp. 9-25
-
-
Riggs, A.D.1
-
6
-
-
0037068372
-
'DNA methylation and chromatin - Unraveling the tangled web'
-
Robertson, K. D. (2002), 'DNA methylation and chromatin - unraveling the tangled web', Oncogene, Vol. 21, pp. 5361-5379.
-
(2002)
Oncogene
, vol.21
, pp. 5361-5379
-
-
Robertson, K.D.1
-
7
-
-
2642551522
-
'Structure and function of eukaryotic DNA methyltransferases'
-
Chen, T. and Li, E. (2004), 'Structure and function of eukaryotic DNA methyltransferases', Curr. Top. Dev. Biol., Vol. 60, pp. 55-89.
-
(2004)
Curr. Top. Dev. Biol.
, vol.60
, pp. 55-89
-
-
Chen, T.1
Li, E.2
-
8
-
-
0019506454
-
'The somatic replication of DNA methylation'
-
Wigler, M., Levy, D. and Perucho, M. (1981), 'The somatic replication of DNA methylation', Cell, Vol. 24, pp. 33-40.
-
(1981)
Cell
, vol.24
, pp. 33-40
-
-
Wigler, M.1
Levy, D.2
Perucho, M.3
-
9
-
-
3743083805
-
'Clonal inheritance of the pattern of DNA methylation in mouse cells'
-
Stein, R., Gruenbaum, Y., Pollack, Y. et al. (1982), 'Clonal inheritance of the pattern of DNA methylation in mouse cells', Proc. Natl. Acad. Sci. USA, Vol. 79, pp. 61-65.
-
(1982)
Proc. Natl. Acad. Sci. USA
, vol.79
, pp. 61-65
-
-
Stein, R.1
Gruenbaum, Y.2
Pollack, Y.3
-
10
-
-
0036144048
-
'DNA methylation patterns and epigenetic memory'
-
Bird, A. (2002), 'DNA methylation patterns and epigenetic memory', Genes Dev., Vol. 16, pp. 6-21.
-
(2002)
Genes Dev.
, vol.16
, pp. 6-21
-
-
Bird, A.1
-
11
-
-
0037372003
-
'Epigenetic regulation of gene expression: How the genome integrates intrinsic and environmental signals'
-
Jaenisch, R. and Bird, A. (2003), 'Epigenetic regulation of gene expression: How the genome integrates intrinsic and environmental signals', Nat. Genet., Vol. 33 (Suppl.), pp. 245-254.
-
(2003)
Nat. Genet.
, vol.33
, Issue.SUPPL.
, pp. 245-254
-
-
Jaenisch, R.1
Bird, A.2
-
12
-
-
1942471150
-
'Epigenetic regulation of mammalian genomic imprinting'
-
Delaval, K. and Feil, R. (2004), 'Epigenetic regulation of mammalian genomic imprinting', Curr. Opin. Genet. Dev., Vol. 14, pp. 188-195.
-
(2004)
Curr. Opin. Genet. Dev.
, vol.14
, pp. 188-195
-
-
Delaval, K.1
Feil, R.2
-
13
-
-
3042808459
-
'Identification and characterisation of imprinted genes in the mouse'
-
Peters, J. and Beechey, C. (2004), 'Identification and characterisation of imprinted genes in the mouse', Brief. Funct. Genomic. Proteomic., Vol. 2, pp. 320-333.
-
(2004)
Brief. Funct. Genomic. Proteomic.
, vol.2
, pp. 320-333
-
-
Peters, J.1
Beechey, C.2
-
14
-
-
0842287648
-
'Controlling X-inactivation in mammals: What does the centre hold?'
-
Rougeulle, C. and Avner, P. (2003), 'Controlling X-inactivation in mammals: What does the centre hold?', Semin. Cell Dev. Biol., Vol. 14, pp. 331-340.
-
(2003)
Semin. Cell Dev. Biol.
, vol.14
, pp. 331-340
-
-
Rougeulle, C.1
Avner, P.2
-
15
-
-
1942541225
-
'X inactivation: Pre- or post-fertilisation turn-off?'
-
Ferguson-Smith, A. C. (2004), 'X inactivation: pre- or post-fertilisation turn-off?', Curr. Biol., Vol. 14, pp. R323-R325.
-
(2004)
Curr. Biol.
, vol.14
-
-
Ferguson-Smith, A.C.1
-
16
-
-
2442479896
-
'DNA and histone methylation in plants'
-
Tariq, M. and Paszkowski, J. (2004), 'DNA and histone methylation in plants', Trends Genet., Vol. 20, pp. 244-251.
-
(2004)
Trends Genet.
, vol.20
, pp. 244-251
-
-
Tariq, M.1
Paszkowski, J.2
-
17
-
-
0037406067
-
'The methyl-CpG binding domain and the evolving role of DNA methylation in animals'
-
Hendrich, B. and Tweedie, S. (2003), 'The methyl-CpG binding domain and the evolving role of DNA methylation in animals', Trends Genet., Vol. 19, pp. 269-277.
-
(2003)
Trends Genet.
, vol.19
, pp. 269-277
-
-
Hendrich, B.1
Tweedie, S.2
-
18
-
-
0024554174
-
'The great GATC: DNA methylation in E. coli'
-
Barras, F. and Marinus, M. G. (1989), 'The great GATC: DNA methylation in E. coli', Trends Genet., Vol. 5, pp. 139-143.
-
(1989)
Trends Genet.
, vol.5
, pp. 139-143
-
-
Barras, F.1
Marinus, M.G.2
-
19
-
-
0025716294
-
'DNA methylation: Evolution of a bacterial immune function into a regulator of gene expression and genome structure in higher eukaryotes'
-
Bestor, T. H. (1990), 'DNA methylation: Evolution of a bacterial immune function into a regulator of gene expression and genome structure in higher eukaryotes', Philos. Trans. R. Soc. Lond. B Biol. Sci., Vol. 326, pp. 179-187.
-
(1990)
Philos. Trans. R. Soc. Lond. B Biol. Sci.
, vol.326
, pp. 179-187
-
-
Bestor, T.H.1
-
20
-
-
0032901199
-
'Cytosine methylation and mammalian development'
-
Walsh, C. P. and Bestor, T. H. (1999), 'Cytosine methylation and mammalian development', Genes Dev., Vol. 13, pp. 26-34.
-
(1999)
Genes Dev.
, vol.13
, pp. 26-34
-
-
Walsh, C.P.1
Bestor, T.H.2
-
21
-
-
0029060923
-
'Dinucleotide relative abundance extremes: A genomic signature'
-
Karlin, S. and Burge, C. (1995), 'Dinucleotide relative abundance extremes: A genomic signature', Trends Genet., Vol. 11, pp. 283-290.
-
(1995)
Trends Genet.
, vol.11
, pp. 283-290
-
-
Karlin, S.1
Burge, C.2
-
22
-
-
0022540321
-
'CpG-rich islands and the function of DNA methylation'
-
Bird, A. P. (1986), 'CpG-rich islands and the function of DNA methylation', Nature, Vol. 321, pp. 209-213.
-
(1986)
Nature
, vol.321
, pp. 209-213
-
-
Bird, A.P.1
-
23
-
-
0023216891
-
'CpG islands in vertebrate genomes'
-
Gardiner-Garden, M. and Frommer, M. (1987), 'CpG islands in vertebrate genomes', J. Mol. Biol., Vol. 196, pp. 261-282.
-
(1987)
J. Mol. Biol.
, vol.196
, pp. 261-282
-
-
Gardiner-Garden, M.1
Frommer, M.2
-
24
-
-
0027141519
-
'Number of CpG islands and genes in human and mouse'
-
Antequera, F. and Bird, A. (1993), 'Number of CpG islands and genes in human and mouse', Proc. Natl. Acad. Sci. USA, Vol. 90, pp. 11995-11999.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 11995-11999
-
-
Antequera, F.1
Bird, A.2
-
25
-
-
4644221440
-
'Preference of DNA methyltransferases for CpG islands in mouse embryonic stem cells'
-
Hattori, N., Abe, T., Hattori, N. et al. (2004), 'Preference of DNA methyltransferases for CpG islands in mouse embryonic stem cells', Genome Res., Vol. 14, pp. 1733-1740.
-
(2004)
Genome Res.
, vol.14
, pp. 1733-1740
-
-
Hattori, N.1
Abe, T.2
Hattori, N.3
-
26
-
-
0026546877
-
'A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands'
-
Frommer, M., McDonald, L. E., Millar, D. S. et al. (1992), 'A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands', Proc. Natl. Acad. Sci. USA, Vol. 89, pp. 1827-1831.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 1827-1831
-
-
Frommer, M.1
McDonald, L.E.2
Millar, D.S.3
-
27
-
-
0020699979
-
'Hypomethylation distinguishes genes of some human cancers from their normal counterparts'
-
Feinberg, A. P. and Vogelstein, B. (1983), 'Hypomethylation distinguishes genes of some human cancers from their normal counterparts', Nature, Vol. 301, pp. 89-92.
-
(1983)
Nature
, vol.301
, pp. 89-92
-
-
Feinberg, A.P.1
Vogelstein, B.2
-
28
-
-
0036274359
-
'The fundamental role of epigenetic events in cancer'
-
Jones, P. A. and Baylin, S. B. (2002), 'The fundamental role of epigenetic events in cancer', Nat. Rev. Genet., Vol. 3, pp. 415-428.
-
(2002)
Nat. Rev. Genet.
, vol.3
, pp. 415-428
-
-
Jones, P.A.1
Baylin, S.B.2
-
29
-
-
5444255150
-
'The epigenetics of cancer etiology'
-
Feinberg, A. P. (2004), 'The epigenetics of cancer etiology', Semin. Cancer Biol., Vol. 14, pp. 427-432.
-
(2004)
Semin. Cancer Biol.
, vol.14
, pp. 427-432
-
-
Feinberg, A.P.1
-
30
-
-
0026708177
-
'Targeted mutation of the DNA methyltransferase gene results in embryonic lethality'
-
Li, E., Bestor, T. H. and Jaenisch, R. (1992), 'Targeted mutation of the DNA methyltransferase gene results in embryonic lethality', Cell, Vol. 69, pp. 915-926.
-
(1992)
Cell
, vol.69
, pp. 915-926
-
-
Li, E.1
Bestor, T.H.2
Jaenisch, R.3
-
31
-
-
0343485074
-
'Transient depletion of xDnmt1 leads to premature gene activation in Xenopus embryos'
-
Stancheva, I. and Meehan, R. R. (2000), 'Transient depletion of xDnmt1 leads to premature gene activation in Xenopus embryos', Genes Dev., Vol. 14, pp. 313-327.
-
(2000)
Genes Dev.
, vol.14
, pp. 313-327
-
-
Stancheva, I.1
Meehan, R.R.2
-
32
-
-
0033615717
-
'DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development'
-
Okano, M., Bell, D. W., Haber, D. A. and Li, E. (1999), 'DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development', Cell, Vol. 99, pp. 247-257.
-
(1999)
Cell
, vol.99
, pp. 247-257
-
-
Okano, M.1
Bell, D.W.2
Haber, D.A.3
Li, E.4
-
33
-
-
0035451090
-
'CTCF is a uniquely versatile transcription regulator linked to epigenetics and disease'
-
Ohlsson, R., Renkawitz, R. and Lobanenkov, V. (2001), 'CTCF is a uniquely versatile transcription regulator linked to epigenetics and disease', Trends Genet., Vol. 17, pp. 520-527.
-
(2001)
Trends Genet.
, vol.17
, pp. 520-527
-
-
Ohlsson, R.1
Renkawitz, R.2
Lobanenkov, V.3
-
34
-
-
0034769764
-
'CpG binding protein is crucial for early embryonic development'
-
Carlone, D. L. and Skalnik, D. G. (2001), 'CpG binding protein is crucial for early embryonic development', Mol. Cell Biol. Vol. 21, pp. 7601-7606.
-
(2001)
Mol. Cell Biol.
, vol.21
, pp. 7601-7606
-
-
Carlone, D.L.1
Skalnik, D.G.2
-
35
-
-
0037642249
-
'Methylation of adjacent CpG sites affects Sp1/Sp3 binding and activity in the p21 (Cip1) promoter'
-
Zhu, W.G., Srinivasan, K., Dai, Z. et al. (2003), 'Methylation of adjacent CpG sites affects Sp1/Sp3 binding and activity in the p21 (Cip1) promoter', Mol. Cell. Biol., Vol. 23, pp. 4056-4065.
-
(2003)
Mol. Cell Biol.
, vol.23
, pp. 4056-4065
-
-
Zhu, W.G.1
Srinivasan, K.2
Dai, Z.3
-
36
-
-
0028104109
-
'Sp1 elements protect a CpG island from de novo methylation'
-
Brandeis, M., Frank, D., Keshet, I. et al. (1994), 'Sp1 elements protect a CpG island from de novo methylation', Nature Vol. 371, pp. 435-438.
-
(1994)
Nature
, vol.371
, pp. 435-438
-
-
Brandeis, M.1
Frank, D.2
Keshet, I.3
-
37
-
-
0027960055
-
'Sp1 sites in the mouse aprt gene promoter are required to prevent methylation of the CpG island'
-
Macleod, D., Charlton, J., Mullins, J. and Bird, A. P. (1994), 'Sp1 sites in the mouse aprt gene promoter are required to prevent methylation of the CpG island', Genes Dev., Vol. 8, pp. 2282-2292.
-
(1994)
Genes Dev.
, vol.8
, pp. 2282-2292
-
-
Macleod, D.1
Charlton, J.2
Mullins, J.3
Bird, A.P.4
-
38
-
-
0024342686
-
'Identification of a mammalian protein that binds specifically to DNA containing methylated CpGs'
-
Meehan, R. R., Lewis, J. D., McKay, S. et al. (1989), 'Identification of a mammalian protein that binds specifically to DNA containing methylated CpGs', Cell, Vol. 58, pp. 499-507.
-
(1989)
Cell
, vol.58
, pp. 499-507
-
-
Meehan, R.R.1
Lewis, J.D.2
McKay, S.3
-
39
-
-
0026747761
-
'Purification, sequence, and cellular localization of a novel chromosomal protein that binds to methylated DNA'
-
Lewis, J. D., Meehan, R. R., Henzel, W. J. et al. (1992), 'Purification, sequence, and cellular localization of a novel chromosomal protein that binds to methylated DNA', Cell, Vol. 69, pp. 905-914.
-
(1992)
Cell
, vol.69
, pp. 905-914
-
-
Lewis, J.D.1
Meehan, R.R.2
Henzel, W.J.3
-
40
-
-
0037327282
-
'DNA methylation in animal development'
-
Meehan, R. R. (2003), 'DNA methylation in animal development', Semin. Cell Dev. Biol., Vol. 14, pp. 53-65.
-
(2003)
Semin. Cell Dev. Biol.
, vol.14
, pp. 53-65
-
-
Meehan, R.R.1
-
41
-
-
0035394961
-
'The p120 catenin partner Kaiso is a DNA methylation-dependent transcriptional repressor'
-
Prokhortchouk, A., Hendrich, B., Jorgensen, H. et al. (2001), 'The p120 catenin partner Kaiso is a DNA methylation-dependent transcriptional repressor', Genes Dev., Vol. 15, pp. 1613-1618.
-
(2001)
Genes Dev.
, vol.15
, pp. 1613-1618
-
-
Prokhortchouk, A.1
Hendrich, B.2
Jorgensen, H.3
-
42
-
-
12344301501
-
'Kaiso is a genome, wide repressor of transcription that is essential for amphibian development'
-
Ruzov, A., Dunican, D.S, Prokhortchouk, A. et al. (2004), 'Kaiso is a genome, wide repressor of transcription that is essential for amphibian development', Development, Vol. 131, pp. 6185-6194.
-
(2004)
Development
, vol.131
, pp. 6185-6194
-
-
Ruzov, A.1
Dunican, D.S.2
Prokhortchouk, A.3
-
43
-
-
0037154972
-
'Epigenetic codes for heterochromatin formation and silencing: Rounding up the usual suspects'
-
Richards, E. J. and Elgin, S. C. (2002), 'Epigenetic codes for heterochromatin formation and silencing: rounding up the usual suspects', Cell, Vol. 108, pp. 489-500.
-
(2002)
Cell
, vol.108
, pp. 489-500
-
-
Richards, E.J.1
Elgin, S.C.2
-
44
-
-
0021029105
-
'5-methylcytosine is localized in nucleosomes that contain histone H1'
-
Ball, D. J., Gross, D. S. and Garrard, W. T. (1983), '5-methylcytosine is localized in nucleosomes that contain histone H1', Proc. Natl. Acad. Sci. USA, Vol. 80, pp. 5490-5494.
-
(1983)
Proc. Natl. Acad. Sci. USA
, vol.80
, pp. 5490-5494
-
-
Ball, D.J.1
Gross, D.S.2
Garrard, W.T.3
-
45
-
-
0003903126
-
'Chromatin'
-
Springer Verlag, New York, NY
-
Van Holde, K. E. (1989), 'Chromatin', Springer Verlag, New York, NY.
-
(1989)
-
-
Van Holde, K.E.1
-
46
-
-
0842324785
-
'The nucleosome: From genomic organization to genomic regulation'
-
Khorasanizadeh, S. (2004), 'The nucleosome: From genomic organization to genomic regulation', Cell, Vol. 116, pp. 259-272.
-
(2004)
Cell
, vol.116
, pp. 259-272
-
-
Khorasanizadeh, S.1
-
47
-
-
18744421874
-
'Chromatin higher order structure: Opening up chromatin for transcription'
-
Németh, A. and Längst, G. (2004), 'Chromatin higher order structure: Opening up chromatin for transcription', Brief. Funct. Genomic. Proteomic., Vol. 2, pp. 334-343.
-
(2004)
Brief. Funct. Genomic. Proteomic.
, vol.2
, pp. 334-343
-
-
Németh, A.1
Längst, G.2
-
48
-
-
0028176808
-
'Nucleosome positioning and modification: Chromatin structures that potentiate transcription'
-
Wolffe, A. P. (1994), 'Nucleosome positioning and modification: Chromatin structures that potentiate transcription', Trends Biochem. Sci., Vol. 19, pp. 240-244.
-
(1994)
Trends Biochem. Sci.
, vol.19
, pp. 240-244
-
-
Wolffe, A.P.1
-
49
-
-
0019878241
-
'The helical periodicity of DNA on the nucleosome'
-
Klug, A. and Lutter, L. C. (1981), 'The helical periodicity of DNA on the nucleosome', Nucleic Acids Res., Vol. 9, pp. 4267-4283.
-
(1981)
Nucleic Acids Res.
, vol.9
, pp. 4267-4283
-
-
Klug, A.1
Lutter, L.C.2
-
50
-
-
0019157001
-
'The structure of histone H1 and its location in chromatin'
-
Allan, J., Hartman, P. G., Crane-Robinson, C. and Aviles, F. X. (1980), 'The structure of histone H1 and its location in chromatin', Nature, Vol. 288, pp. 675-679.
-
(1980)
Nature
, vol.288
, pp. 675-679
-
-
Allan, J.1
Hartman, P.G.2
Crane-Robinson, C.3
Aviles, F.X.4
-
51
-
-
0037992395
-
'The structure of DNA in the nucleosome core'
-
Richmond, T. J. and Davey, C. A. (2003), 'The structure of DNA in the nucleosome core', Nature, Vol. 423, pp. 145-150.
-
(2003)
Nature
, vol.423
, pp. 145-150
-
-
Richmond, T.J.1
Davey, C.A.2
-
52
-
-
3242882127
-
'Origin of the intrinsic rigidity of DNA'
-
Mills, J. B. and Hagerman, P. J. (2004), 'Origin of the intrinsic rigidity of DNA', Nucleic Acids Res., Vol. 32, pp. 4055-4059.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 4055-4059
-
-
Mills, J.B.1
Hagerman, P.J.2
-
53
-
-
0345097650
-
'Is a small number of charge neutralizations sufficient to bend nucleosome core DNA onto its superhelical ramp?'
-
Manning, G. S. (2003), 'Is a small number of charge neutralizations sufficient to bend nucleosome core DNA onto its superhelical ramp?', J. Am. Chem. Soc., Vol. 125, pp. 15087-15092.
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 15087-15092
-
-
Manning, G.S.1
-
54
-
-
1842411320
-
'Crystal structure of the nucleosome core particle at 2.8 Å resolution'
-
Luger, K., Maeder, A. W., Richmond, R. K. et al. (1997), 'Crystal structure of the nucleosome core particle at 2.8 Å resolution', Nature, Vol. 389, pp. 251-260.
-
(1997)
Nature
, vol.389
, pp. 251-260
-
-
Luger, K.1
Maeder, A.W.2
Richmond, R.K.3
-
55
-
-
0036307707
-
'Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution'
-
Davey, C. A., Sargent, D. F., Luger, K. et al. (2002), 'Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution', J. Mol. Biol., Vol. 319, pp. 1097-1113.
-
(2002)
J. Mol. Biol.
, vol.319
, pp. 1097-1113
-
-
Davey, C.A.1
Sargent, D.F.2
Luger, K.3
-
56
-
-
0031221393
-
'DNA recognition and nucleosome organisation'
-
Travers, A. and Drew, H. (1998), 'DNA recognition and nucleosome organisation', Biopolymers, Vol. 44, pp. 423-433.
-
(1998)
Biopolymers
, vol.44
, pp. 423-433
-
-
Travers, A.1
Drew, H.2
-
57
-
-
0035704707
-
'Role of DNA sequence in nucleosome stability and dynamics'
-
Widom, J. (2001), 'Role of DNA sequence in nucleosome stability and dynamics', Q. Rev. Biophys., Vol. 34, pp. 269-324.
-
(2001)
Q. Rev. Biophys.
, vol.34
, pp. 269-324
-
-
Widom, J.1
-
58
-
-
0023001414
-
'Sequence periodicities in chicken nucleosome core DNA'
-
Satchwell, S. C., Drew, H. R. and Travers, A. A. (1986), 'Sequence periodicities in chicken nucleosome core DNA', J. Mol. Biol. Vol. 191, pp. 659-675
-
(1986)
J. Mol. Biol.
, vol.191
, pp. 659-675
-
-
Satchwell, S.C.1
Drew, H.R.2
Travers, A.A.3
-
59
-
-
0023224796
-
'Evidence for DNA kinks in DNA folding in the nucleosome'
-
Hogan, M. E., Rooney, T. F. and Austin, R. H. (1987), 'Evidence for DNA kinks in DNA folding in the nucleosome', Nature, Vol. 328, pp. 554-557.
-
(1987)
Nature
, vol.328
, pp. 554-557
-
-
Hogan, M.E.1
Rooney, T.F.2
Austin, R.H.3
-
60
-
-
0001079085
-
'Artificial nucleosome positioning sequences'
-
Shrader, T. E. and Crothers, D. M. (1989), 'Artificial nucleosome positioning sequences', Proc. Natl. Acad. Sci. USA, Vol. 86, pp. 7418-7422.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 7418-7422
-
-
Shrader, T.E.1
Crothers, D.M.2
-
61
-
-
0028841366
-
'Periodicity of strong nucleosome positioning sites around the chicken adult beta-globin gene may encode regularly spaced chromatin'
-
Davey, C., Pennings, S., Meersseman, G. et al. (1995), 'Periodicity of strong nucleosome positioning sites around the chicken adult beta-globin gene may encode regularly spaced chromatin', Proc. Natl. Acad. Sci. USA, Vol. 92, pp. 11210-11214.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 11210-11214
-
-
Davey, C.1
Pennings, S.2
Meersseman, G.3
-
62
-
-
0037474533
-
'Nucleosome positioning signals in the DNA sequence of the human and mouse H19 imprinting control regions'
-
Davey, C., Fraser, R., Smolle, M. et al. (2003), 'Nucleosome positioning signals in the DNA sequence of the human and mouse H19 imprinting control regions', J. Mol. Biol., Vol. 325, pp. 873-887.
-
(2003)
J. Mol. Biol.
, vol.325
, pp. 873-887
-
-
Davey, C.1
Fraser, R.2
Smolle, M.3
-
63
-
-
0035860797
-
'DNA sequence plays a major role in determining nucleosome positions in yeast CUP1 chromatin'
-
Shen, C.-H. and Clark, D. J. (2001), 'DNA sequence plays a major role in determining nucleosome positions in yeast CUP1 chromatin', J. Biol. Chem., Vol. 276, pp. 35209-35216.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 35209-35216
-
-
Shen, C.-H.1
Clark, D.J.2
-
64
-
-
0025916330
-
'Chromatosome positioning on assembled long chromatin. Linker histones affect nucleosome placement on 5 S rDNA
-
Meersseman, G., Pennings, S. and Bradbury, E. M. (1991), 'Chromatosome positioning on assembled long chromatin. Linker histones affect nucleosome placement on 5 S rDNA. J. Mol. Biol., Vol. 220, pp. 89-100.
-
(1991)
J. Mol. Biol.
, vol.220
, pp. 89-100
-
-
Meersseman, G.1
Pennings, S.2
Bradbury, E.M.3
-
65
-
-
0025887821
-
'Mobility of positioned nucleosomes on 5 S rDNA'
-
Pennings, S., Meersseman, G. and Bradbury, E. M. (1991), 'Mobility of positioned nucleosomes on 5 S rDNA', J. Mol. Biol., Vol. 220, pp. 101-110.
-
(1991)
J. Mol. Biol.
, vol.220
, pp. 101-110
-
-
Pennings, S.1
Meersseman, G.2
Bradbury, E.M.3
-
66
-
-
0026642219
-
'Mobile nucleosomes - A general behaviour'
-
Meersseman, G., Pennings, S. and Bradbury, E. M. (1992), 'Mobile nucleosomes - a general behaviour', EMBO J., Vol. 11, pp. 2951-2959.
-
(1992)
EMBO J.
, vol.11
, pp. 2951-2959
-
-
Meersseman, G.1
Pennings, S.2
Bradbury, E.M.3
-
67
-
-
0033584369
-
'Nucleosome mobilization catalysed by the yeast SWI/SNF complex'
-
Whitehouse, I., Flaus, A., Cairns, B. R. et al. (1999), 'Nucleosome mobilization catalysed by the yeast SWI/SNF complex', Nature, Vol. 400, pp. 784-787.
-
(1999)
Nature
, vol.400
, pp. 784-787
-
-
Whitehouse, I.1
Flaus, A.2
Cairns, B.R.3
-
68
-
-
0142184470
-
'Pathways for remodelling chromatin'
-
Owen-Hughes, T. (2003), 'Pathways for remodelling chromatin', Biochem. Soc. Trans., Vol. 31, pp. 893-905.
-
(2003)
Biochem. Soc. Trans.
, vol.31
, pp. 893-905
-
-
Owen-Hughes, T.1
-
69
-
-
0031588962
-
'CpG methylation remodels chromatin structure in vitro'
-
Davey, C., Pennings, S. and Allan, J. (1997), 'CpG methylation remodels chromatin structure in vitro', J. Mol. Biol., Vol. 267, pp. 276-288.
-
(1997)
J. Mol. Biol.
, vol.267
, pp. 276-288
-
-
Davey, C.1
Pennings, S.2
Allan, J.3
-
70
-
-
0028233376
-
'Nucleosome positioning on chicken and human globin gene promoters in vitro'
-
Yenidunya, A., Davey, C., Clark, D. et al. (1994), 'Nucleosome positioning on chicken and human globin gene promoters in vitro', J. Mol. Biol., Vol. 237, pp. 401-414.
-
(1994)
J. Mol. Biol.
, vol.237
, pp. 401-414
-
-
Yenidunya, A.1
Davey, C.2
Clark, D.3
-
71
-
-
4043172850
-
'A determining influence for CpG dinucleotides on nucleosome positioning in vitro'
-
Davey, C. S., Pennings, S., Reilly, C. et al. (2004), 'A determining influence for CpG dinucleotides on nucleosome positioning in vitro', Nucleic Acids Res., Vol. 32, pp. 4322-4331.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 4322-4331
-
-
Davey, C.S.1
Pennings, S.2
Reilly, C.3
-
72
-
-
0032555263
-
'The exocyclic groups of DNA modulate the affinity and positioning of the histone octamer'
-
Buttinelli, M., Minnock, A., Panetta, G. et al. (1998), 'The exocyclic groups of DNA modulate the affinity and positioning of the histone octamer', Proc. Natl. Acad. Sci. USA, Vol. 95, pp. 8544-8549.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 8544-8549
-
-
Buttinelli, M.1
Minnock, A.2
Panetta, G.3
-
73
-
-
0034614487
-
'Sequence-dependent DNA structure: Tetranucleotide conformational maps'
-
Packer, M. J., Dauncey, M. P. and Hunter, C. A. (2000), 'Sequence-dependent DNA structure: Tetranucleotide conformational maps', J. Mol. Biol., Vol. 295, pp. 85-103.
-
(2000)
J. Mol. Biol.
, vol.295
, pp. 85-103
-
-
Packer, M.J.1
Dauncey, M.P.2
Hunter, C.A.3
-
74
-
-
0042386600
-
'Sequence-dependent DNA structure: A database of octamer structural parameters'
-
Gardiner, E. J., Hunter, C. A., Packer, M. J. et al. (2003), 'Sequence-dependent DNA structure: A database of octamer structural parameters', J. Mol. Biol., Vol. 332, pp. 1025-1035.
-
(2003)
J. Mol. Biol.
, vol.332
, pp. 1025-1035
-
-
Gardiner, E.J.1
Hunter, C.A.2
Packer, M.J.3
-
75
-
-
0019544304
-
'Effects of methylation on a synthetic polynucleotide: The B-Z transition in poly(dG-m5dC).poly(dG-m5dC)'
-
Behe, M. and Felsenfeld, G. (1981), 'Effects of methylation on a synthetic polynucleotide: The B-Z transition in poly(dG-m5dC).poly(dG-m5dC)', Proc. Natl Acad. Sci. USA, Vol. 78, pp. 1619-1623.
-
(1981)
Proc. Natl. Acad. Sci. USA
, vol.78
, pp. 1619-1623
-
-
Behe, M.1
Felsenfeld, G.2
-
76
-
-
0037803571
-
'Timeline: Z-DNA: The long road to biological function'
-
Rich, A and Zhang, S. (2003), 'Timeline: Z-DNA: The long road to biological function', Nat. Rev. Genet., Vol. 4, pp. 566-572.
-
(2003)
Nat. Rev. Genet.
, vol.4
, pp. 566-572
-
-
Rich, A.1
Zhang, S.2
-
77
-
-
0030754556
-
'Methylation of the Z-DNA decamer d(GC)5 potentiates the formation of A-DNA: Crystal structure of (Gm5CGm5CGCGCGC)'
-
Tippin, D. B., Ramakrishnan, B. and Sundaralingam, M. (1997), 'Methylation of the Z-DNA decamer d(GC)5 potentiates the formation of A-DNA: Crystal structure of (Gm5CGm5CGCGCGC)', J. Mol. Biol. Vol. 270, pp. 247-258.
-
(1997)
J. Mol. Biol.
, vol.270
, pp. 247-258
-
-
Tippin, D.B.1
Ramakrishnan, B.2
Sundaralingam, M.3
-
79
-
-
0023645233
-
'Effect of Z-DNA on nucleosome placement'
-
Garner, M. M. and Felsenfeld, G. (1987), 'Effect of Z-DNA on nucleosome placement', J. Mol. Biol., Vol. 196, pp. 581-590.
-
(1987)
J. Mol. Biol.
, vol.196
, pp. 581-590
-
-
Garner, M.M.1
Felsenfeld, G.2
-
80
-
-
0023056961
-
'Conformational DNA transition in the in vitro torsionally strained chicken beta-globin 5′ region'
-
Runkel, L. and Nordheim, A. (1986), 'Conformational DNA transition in the in vitro torsionally strained chicken beta-globin 5′ region', Nucl. Acids Res., Vol. 14, pp. 7143-7158.
-
(1986)
Nucl. Acids Res.
, vol.14
, pp. 7143-7158
-
-
Runkel, L.1
Nordheim, A.2
-
81
-
-
0032530555
-
'DNA sequence-dependent deformability deduced from protein-DNA crystal complexes'
-
Olson, W. K., Gorin, A. A., Lux, X.-J. et al. (1998), 'DNA sequence-dependent deformability deduced from protein-DNA crystal complexes', Proc. Natl. Acad. Sci. USA, Vol. 95, pp. 11163-11168.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 11163-11168
-
-
Olson, W.K.1
Gorin, A.A.2
Lux, X.-J.3
-
82
-
-
0035369057
-
'Impact of CpG methylation on structure, dynamics and solvation of cAMP DNA responsive element'
-
Derreumaux, S., Chaoui, M., Tevanian, G. and Fermandjian, S. (2001), 'Impact of CpG methylation on structure, dynamics and solvation of cAMP DNA responsive element', Nucleic Acids Res., Vol. 29, 2314-2326.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 2314-2326
-
-
Derreumaux, S.1
Chaoui, M.2
Tevanian, G.3
Fermandjian, S.4
-
83
-
-
0035899997
-
'Dynamic impact of methylation at the M. HhaI target site: A solid-state deuterium NMR study'
-
Meints, G. A. and Drobny, G. P. (2001), 'Dynamic impact of methylation at the M. HhaI target site: A solid-state deuterium NMR study', Biochemistry, Vol. 40, pp. 12436-12443.
-
(2001)
Biochemistry
, vol.40
, pp. 12436-12443
-
-
Meints, G.A.1
Drobny, G.P.2
-
84
-
-
0036922909
-
'Structural effects of cytosine methylation on DNA sugar pucker studied by FTIR'
-
Banyay, M. and Graslund, A. (2002), 'Structural effects of cytosine methylation on DNA sugar pucker studied by FTIR', J. Mol. Biol., Vol. 324, pp. 667-676.
-
(2002)
J. Mol. Biol.
, vol.324
, pp. 667-676
-
-
Banyay, M.1
Graslund, A.2
-
85
-
-
0036306349
-
'Bending and flexibility of methylated and unmethylated EcoRI DNA'
-
Nathan, D. and Crothers, D. M. (2002), 'Bending and flexibility of methylated and unmethylated EcoRI DNA', J. Mol. Biol. Vol. 316, pp. 7-17.
-
(2002)
J. Mol. Biol.
, vol.316
, pp. 7-17
-
-
Nathan, D.1
Crothers, D.M.2
-
86
-
-
4444221204
-
'The influence of DNA stiffness upon nucleosome formation'
-
Virstedt, J., Berge, T., Henderson, R. M. et al. (2004), 'The influence of DNA stiffness upon nucleosome formation', J. Struct. Biol., Vol. 148, pp. 66-85.
-
(2004)
J. Struct. Biol.
, vol.148
, pp. 66-85
-
-
Virstedt, J.1
Berge, T.2
Henderson, R.M.3
-
87
-
-
0029790784
-
'Methylation of expanded CCG triplet repeat DNA from fragile X syndrome patients enhances nucleosome exclusion'
-
Wang, Y. H. and Griffith, J. (1996), 'Methylation of expanded CCG triplet repeat DNA from fragile X syndrome patients enhances nucleosome exclusion', J. Biol. Chem., Vol. 271, pp. 22937-22940.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 22937-22940
-
-
Wang, Y.H.1
Griffith, J.2
-
88
-
-
0029744342
-
'Nucleosome assembly on methylated CGG triplet repeats in the fragile X mental retardation gene 1 promoter'
-
Godde, J. S., Kass, S. U., Hirst, M. C. and Wolffe, A. P. (1996), 'Nucleosome assembly on methylated CGG triplet repeats in the fragile X mental retardation gene 1 promoter', J. Biol. Chem., Vol. 271, pp. 24325-24328.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 24325-24328
-
-
Godde, J.S.1
Kass, S.U.2
Hirst, M.C.3
Wolffe, A.P.4
-
89
-
-
0028954144
-
'Methylation at CpG sequences does not influence histone H1 binding to a nucleosome including a Xenopus borealis 5 S rRNA gene'
-
Nightingale, K. and Wolffe, A. P. (1995), 'Methylation at CpG sequences does not influence histone H1 binding to a nucleosome including a Xenopus borealis 5 S rRNA gene', J. Biol. Chem., Vol. 270, pp. 4197-4200.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 4197-4200
-
-
Nightingale, K.1
Wolffe, A.P.2
-
90
-
-
0027304429
-
'Nucleosome interactions with a human Alu element'
-
Englander, E. W., Wolffe, A. P. and Howard, B. H. (1993), 'Nucleosome interactions with a human Alu element', J. Biol. Chem., Vol. 268, pp. 19565-19573.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 19565-19573
-
-
Englander, E.W.1
Wolffe, A.P.2
Howard, B.H.3
-
91
-
-
0023645582
-
'Structural analysis of a reconstituted DNA containing three histone octamers and histone H5'
-
Drew, H. R. and McCall, M. J. (1987), 'Structural analysis of a reconstituted DNA containing three histone octamers and histone H5', J. Mol. Biol., Vol. 197, pp. 485-511.
-
(1987)
J. Mol. Biol.
, vol.197
, pp. 485-511
-
-
Drew, H.R.1
McCall, M.J.2
-
92
-
-
0344255820
-
'Nucleosome positioning signals and potential H-DNA within the DNA sequence of the imprinting control region of the mouse Igf2r gene'
-
Davey, C. and Allan, J. (2003), 'Nucleosome positioning signals and potential H-DNA within the DNA sequence of the imprinting control region of the mouse Igf2r gene', Biochim. Biophys. Acta Vol. 1630, pp. 103-116.
-
(2003)
Biochim. Biophys. Acta
, vol.1630
, pp. 103-116
-
-
Davey, C.1
Allan, J.2
-
93
-
-
3042809986
-
'Chromatin remodelling and the interaction between enhancers and promoters in the beta-globin locus'
-
Dean, A. (2004), 'Chromatin remodelling and the interaction between enhancers and promoters in the beta-globin locus', Brief. Funct. Genomic. Proteomic., Vol. 2, pp. 344-354.
-
(2004)
Brief. Funct. Genomic. Proteomic.
, vol.2
, pp. 344-354
-
-
Dean, A.1
-
94
-
-
0036240062
-
'Multiple nucleosome positioning sites regulate the CTCF-mediated insulator function of the H19 imprinting control region'
-
Kanduri, M., Kanduri, C., Mariano, P. et al. (2002), 'Multiple nucleosome positioning sites regulate the CTCF-mediated insulator function of the H19 imprinting control region', Mol. Cell. Biol., Vol. 22, pp. 3339-3344.
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 3339-3344
-
-
Kanduri, M.1
Kanduri, C.2
Mariano, P.3
-
95
-
-
0035085098
-
'Long-range nucleosome ordering is associated with gene silencing in Drosophila melanogaster pericentric heterochromatin'
-
Sun, F. L., Cuaycong, M. H. and Elgin, S. C. (2001), 'Long-range nucleosome ordering is associated with gene silencing in Drosophila melanogaster pericentric heterochromatin', Mol. Cell. Biol., Vol. 21, pp. 2867-2879.
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 2867-2879
-
-
Sun, F.L.1
Cuaycong, M.H.2
Elgin, S.C.3
-
96
-
-
0031564633
-
'Isolation and characterisation of genomic nucleosome-positioning sequences'
-
Widlund, H. R., Cao, H., Simonsson, S. et al. (1997), 'Isolation and characterisation of genomic nucleosome-positioning sequences', J. Mol. Biol., Vol. 267, pp. 807-817.
-
(1997)
J. Mol. Biol.
, vol.267
, pp. 807-817
-
-
Widlund, H.R.1
Cao, H.2
Simonsson, S.3
-
97
-
-
0032512794
-
'New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning'
-
Lowary, P. T. and Widom, J. (1998), 'New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning', J. Mol. Biol., Vol. 276, pp. 19-42.
-
(1998)
J. Mol. Biol.
, vol.276
, pp. 19-42
-
-
Lowary, P.T.1
Widom, J.2
-
98
-
-
1942489758
-
'Nucleosomal locations of dominant DNA sequence motifs for histone-DNA interactions and nucleosome positioning'
-
Thåström, A., Bingham, L. M. and Widom, J. (2004), 'Nucleosomal locations of dominant DNA sequence motifs for histone-DNA interactions and nucleosome positioning', J. Mol. Biol., Vol. 338, pp. 695-709.
-
(2004)
J. Mol. Biol.
, vol.338
, pp. 695-709
-
-
Thåström, A.1
Bingham, L.M.2
Widom, J.3
-
99
-
-
7444260846
-
'The ENCODE (ENCyclopedia Of DNA Elements) Project'
-
ENCODE Project Consortium
-
ENCODE Project Consortium (2004), 'The ENCODE (ENCyclopedia Of DNA Elements) Project', Science, Vol. 306, pp. 636-640.
-
(2004)
Science
, vol.306
, pp. 636-640
-
-
|