The ENCODE (ENCyclopedia of DNA Elements) Project

Science

Volumn 306, Issue 5696, 2004, Pages 636-640

  Feingold, E A ^a   Good, P J ^a   Guyer, M S ^a   Kamholz, S ^a   Liefer, L ^a   Wetterstrand, K ^a   Collins, F S ^a   Gingeras, T R ^b   Kampa, D ^b   Sekinger, E A ^b   Cheng, J ^b   Hirsch, H ^b   Ghosh, S ^b   Zhu, Z ^b   Patel, S ^b   Piccolboni, A ^b   Yang, A ^b   Tammana, H ^b   Bekiranov, S ^b   Kapranov, P ^b   Harrison, R ^b   Church, G ^b   Struhl, K ^b   Ren, B ^c   Kim, T H ^c   Barrera, L O ^c   Qu, C ^c   van Calcar, S ^c   Luna, R ^c   Glass, C K ^c   Rosenfeld, M G ^c   Guigo, R ^d   Antonarakis, S E ^d   Birney, E ^d   Brent, M ^d   Pachter, L ^d   Reymond, A ^d   Dermitzakis, E T ^d   Dewey, C ^d   Keefe, D ^d   Denoeud, F ^d   Lagarde, J ^d   Ashurst, J ^d   Hubbard, T ^d   Wesselink, J J ^d   Castelo, R ^d   Eyras, E ^d   Myers, R M ^e   Sidow, A ^e   Batzoglou, S ^e   Trinklein, N D ^e   Hartman, S J ^e   Aldred, S F ^e   Anton, E ^e   Schroeder, D I ^e   Marticke, S S ^e   Nguyen, L ^e   Schmutz, J ^e   Grimwood, J ^e   Dickson, M ^e   Cooper, G M ^e   Stone, E A ^e   Asimenos, G ^e   Brudno, M ^e   Dutta, A ^f   Karnani, N ^f   Taylor, C M ^f   Kim, H K ^f   Robins, G ^f   Stamatoyannopoulos, G ^g   Stamatoyannopoulos, J A ^g   Dorschner, M ^g   Sabo, P ^g   Hawrylycz, M ^g   Humbert, R ^g   Wallace, J ^g   Yu, M ^g   Navas, P A ^g   McArthur, M ^g   Noble, W S ^g   Dunham, I ^h   Koch, C M ^h   Andrews, R M ^h   Clelland, G K ^h   Wilcox, S ^h   Fowler, J C ^h   James, K D ^h   Groth, P ^h   Dovey, O M ^h   Ellis, P D ^h   Wraight, V L ^h   Mungall, A J ^h   Dhami, P ^h   Fiegler, H ^h   Langford, C F ^h   Carter, N P ^h   Vetrie, D ^h   Snyder, M ⁱ   Euskirchen, G ⁱ   Urban, A E ⁱ   Nagalakshmi, U ⁱ   Rinn, J ⁱ   Popescu, G ⁱ   Bertone, P ⁱ   Hartman, S ⁱ   Rozowsky, J ⁱ   Emanuelsson, O ⁱ   Royce, T ⁱ   Chung, S ⁱ   Gerstein, M ⁱ   Lian, Z ⁱ   Lian, J ⁱ   Nakayama, Y ⁱ   Weissman, S ⁱ   Stolc, V ⁱ   Tongprasit, W ⁱ   Sethi, H ⁱ   Jones, S ^j   Marra, M ^j   Shin, H ^j   Schein, J ^j   Clamp, M ^k   Lindblad Toh, K ^k   Chang, J ^k   Jaffe, D B ^k   Kamal, M ^k   Lander, E S ^k   Mikkelsen, T S ^k   Vinson, J ^k   Zody, M C ^k   de Jong, P J ^l   Osoegawa, K ^l   Nefedov, M ^l   Zhu, B ^l   Baxevanis, A D ^a   Wolfsberg, T G ^a   Crawford, G E ^a   Whittle, J ^a   Holt, I E ^a   Vasicek, T J ^a   Zhou, D ^a   Luo, S ^a   Green, E D ^a   Bouffard, G G ^a   Margulies, E H ^a   Portnoy, M E ^a   Hansen, N F ^a   Thomas, P J ^a   McDowell, J C ^a   Maskeri, B ^a   Young, A C ^a   Idol, J R ^a   Blakesley, R W ^a   Schuler, G ^m   Miller, W ⁿ   Hardison, R ⁿ   Elnitski, L ⁿ   Shah, P ⁿ   Salzberg, S L ^o   Pertea, M ^o   Majoros, W H ^o   Haussler, D ^p   Thomas, D ^p   Rosenbloom, K R ^p   Clawson, H ^p   Siepel, A ^p   Kent, W J ^p   Weng, Z ^q   Jin, S ^q   Halees, A ^q   Burden, H ^q   Karaoz, U ^q   Fu, Y ^q   Yu, Y ^q   Ding, C ^q   Cantor, C R ^q   Kingston, R E ^r   Dennis, J ^r   Green, R D ^s   Singer, M A ^s   Richmond, T A ^s   Norton, J E ^s   Farnham, P J ^s   Oberley, M J ^s   Inman, D R ^s   McCormick, M R ^s   Kim, H ^s   Middle, C L ^s   Pirrung, M C ^s   Fu, X D ^t   Kwon, Y S ^t   Ye, Z ^t   Dekker, J ^u   Tabuchi, T M ^u   Gheldof, N ^u   Dostie, J ^u   Harvey, S C ^u   more..

^a NATIONAL HUMAN GENOME RESEARCH INSTITUTE   (United States)

^b Thermo Fisher Scientific   (United States)

^c LUDWIG INSTITUTE FOR CANCER RESEARCH   (Australia)

^d INST MUNIC D INVESTIGACIO MEDICA   (Spain)

^e STANFORD UNIVERSITY   (United States)

^f UNIVERSITY OF VIRGINIA   (United States)

^g UNIVERSITY OF WASHINGTON   (United States)

^h WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

ⁱ YALE UNIVERSITY   (United States)

^j BRITISH COLUMBIA CANCER AGENCY   (Canada)

^k BROAD INSTITUTE OF MIT AND HARVARD   (United States)

^l CHILDREN S HOSPITAL OAKLAND RESEARCH INSTITUTE   (United States)

^m NATIONAL INSTITUTES OF HEALTH   (United States)

ⁿ PENNSYLVANIA STATE UNIVERSITY   (United States)

^o J CRAIG VENTER INSTITUTE   (United States)

^p UNIVERSITY OF CALIFORNIA   (United States)

^q BOSTON UNIVERSITY   (United States)

^r MASSACHUSETTS GENERAL HOSPITAL   (United States)

^s Roche NimbleGen Inc   (United States)

^t UNIVERSITY OF CALIFORNIA   (United States)

^u UNIVERSITY OF MASSACHUSETTS MEDICAL SCHOOL   (United States)

more..

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL FUNCTIONS; ENCYCLOPEDIA OF DNA ELEMENTS (ENCODE); GENOME SEQUENCES;

GENES; PERSONNEL; PROJECT MANAGEMENT;

DNA;

COMPLEMENTARY DNA; RIBOSOME RNA; TRANSFER RNA;

DNA;

CHROMOSOME STRUCTURE; GENE SEQUENCE; GENETIC TRANSCRIPTION; HUMAN GENOME; INFORMATION PROCESSING; PRIORITY JOURNAL; PROMOTER REGION; REVIEW;

ACCESS TO INFORMATION; ANIMALS; COMPUTATIONAL BIOLOGY; CONSERVED SEQUENCE; DATABASES, NUCLEIC ACID; EVOLUTION, MOLECULAR; GENOME, HUMAN; GENOMICS; HUMANS; INFORMATION DISSEMINATION; INTERNET; NATIONAL INSTITUTES OF HEALTH (U.S.); PILOT PROJECTS; PROTEINS; PUBLISHING; REGULATORY SEQUENCES, NUCLEIC ACID; SEQUENCE ANALYSIS, DNA; UNITED STATES;

EID: 7444260846     PISSN: 00368075     EISSN: None     Source Type: Journal    
DOI: 10.1126/science.1105136     Document Type: Review

References (29)

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29. The Consortium thanks the ENCODE Scientific Advisory Panel for their helpful advice on the project: G. Weinstock, G. Churchill, M. Eisen, S. Elgin, S. Elledge, J. Rine, and M. Vidal. We thank D. Leja, and M. Cichnowski for their work in creating figures for this paper. Supported by the National Human Genome Research Institute, the National Library of Medicine, the Wellcome Trust, and the Howard Hughes Medical Institute.