-
2
-
-
0023839755
-
Comparison of simian immunodeficiency virus isolates
-
(1988)
Nature
, vol.331
, pp. 619-622
-
-
Kestler, H.W.D.1
-
4
-
-
0028326110
-
Molecular and biological characterization of simian immunodeficiency virus macaque strain 32H proviral clones containing nef size variants
-
(1994)
J Gen Virol
, vol.75
, pp. 529-543
-
-
Rud, E.W.1
-
5
-
-
0024268309
-
Characterization of infectious molecular clones of simian immunodeficiency virus (SIVmac) and human immunodeficiency virus type 2: Persistent infection of rhesus monkeys with molecularly cloned SlVmac
-
(1988)
J Virol
, vol.62
, pp. 4691-4696
-
-
Naidu, Y.M.1
-
6
-
-
0025334599
-
Induction of AIDS in rhesus monkeys by molecularly cloned simian immunodeficiency virus
-
(1990)
Science
, vol.248
, pp. 1109-1112
-
-
Kestler, H.1
-
7
-
-
0026088713
-
Selection of genetic variants of simian immunodeficiency virus in persistently infected rhesus monkeys
-
(1991)
J Virol
, vol.65
, pp. 1843-1854
-
-
Burns, D.P.1
Desrosiers, R.C.2
-
8
-
-
0031903409
-
Viral genetic evolution in macaques infected with molecularly cloned simian immunodeficiency virus correlates with the extent of persistent viremia
-
(1998)
J Virol
, vol.72
, pp. 6482-6489
-
-
Hirsch, V.M.1
-
12
-
-
0032581992
-
Macaques infected with cloned simian immunodeficiency virus show recurring nef gene alterations
-
(1998)
Virology
, vol.249
, pp. 260-274
-
-
Heidecker, G.1
-
13
-
-
0035078787
-
Route of simian immunodeficiency virus inoculation determines the complexity but not the identity of viral variant populations that infect rhesus macaques
-
(2001)
J Virol
, vol.75
, pp. 3753-3765
-
-
Greenier, J.L.1
-
14
-
-
2042543002
-
-
-
-
-
16
-
-
0035148309
-
Rapid definition of five novel HLA-A*3002-restricted human immunodeficiency virus-specific cytotoxic T-lymphocyte epitopes by Elispot and intracellular cytokine staining assays
-
(2001)
J Virol
, vol.75
, pp. 1339-1347
-
-
Goulder, P.J.1
-
20
-
-
0035123665
-
Macrophage tropism of human immunodeficiency virus type 1 facilitates in vivo escape from cytotoxic T-lymphocyte pressure
-
(2001)
J Virol
, vol.75
, pp. 2706-2709
-
-
Schutten, M.1
-
21
-
-
0032416085
-
Viral immune evasion due to persistence of activated T cells without effector function
-
(1998)
J Exp Med
, vol.188
, pp. 2205-2213
-
-
Zajac, A.J.1
-
26
-
-
0026801258
-
Fidelity of the RNA-dependent DNA synthesis exhibited by the reverse transcriptases of human immunodeficiency virus types 1 and 2 and of murine leukemia virus: Mispair extension frequencies
-
(1992)
Biochemistry
, vol.31
, pp. 9393-9398
-
-
Bakhanashvili, M.1
Hizi, A.2
-
30
-
-
0028952146
-
HIV population dynamics in vivo: Implications for genetic variation, pathogenesis, and therapy
-
(1995)
Science
, vol.267
, pp. 483-489
-
-
Coffin, J.M.1
-
33
-
-
0024991805
-
Persistent infection of rhesus macaques with a molecular clone of human immunodeficiency virus type 2: Evidence of minimal genetic drift and low pathogenetic effects
-
(1990)
J Virol
, vol.64
, pp. 4462-4467
-
-
Franchini, G.1
-
35
-
-
0033559908
-
Molecular and functional analysis of a conserved CTL epitope in HIV-1 p24 recognized from a long-term nonprogressor: Constraints on immune escape associated with targeting a sequence essential for viral replication
-
(1999)
J Immunol
, vol.162
, pp. 3727-3734
-
-
Wagner, R.1
-
38
-
-
0022507362
-
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
-
(1986)
Mol Biol Evol
, vol.3
, pp. 418-426
-
-
Nei, M.1
Gojobori, T.2
-
39
-
-
0030054305
-
Estimating synonymous and nonsynonymous substitution rates
-
(1996)
Mol Biol Evol
, vol.13
, pp. 105-114
-
-
Muse, S.V.1
-
42
-
-
0025827529
-
Human immunodeficiency virus genetic variation that can escape cytotoxic T cell recognition
-
(1991)
Nature
, vol.354
, pp. 453-459
-
-
Phillips, R.E.1
-
43
-
-
0026507953
-
Identification of overlapping HLA class I-restricted cytotoxic T cell epitopes in a conserved region of the human immunodeficiency virus type 1 envelope glycoprotein: Definition of minimum epitopes and analysis of the effects of sequence variation
-
(1992)
J Exp Med
, vol.175
, pp. 961-971
-
-
Johnson, R.P.1
Trocha, A.2
Buchanan, T.M.3
Walker, B.D.4
-
44
-
-
0028261060
-
Cytotoxic T-cell activity antagonized by naturally occurring HIV-I Gag variants
-
(1994)
Nature
, vol.369
, pp. 403-407
-
-
Klenerman, P.1
-
46
-
-
0029046706
-
Immunogenic HIV variant peptides that bind to HLA-B8 can fail to stimulate cytotoxic T lymphocyte responses
-
(1995)
J Immunol
, vol.155
, pp. 2729-2736
-
-
McAdam, S.1
-
47
-
-
0028846194
-
Cytotoxic T lymphocyte lysis inhibited by viable HIV mutants
-
(1995)
Science
, vol.270
, pp. 1360-1362
-
-
Meier, U.C.1
-
48
-
-
0031048597
-
Positive selection of HIV-1 cytotoxic T lymphocyte escape variants during primary infection
-
(1997)
Proc Nad Acad Sci USA
, vol.94
, pp. 1890-1895
-
-
Price, D.A.1
-
49
-
-
16944366524
-
Late escape from an immunodominant cytotoxic T-lymphocyte response associated with progression to AIDS
-
(1997)
Nat Med
, vol.3
, pp. 212-217
-
-
Goulder, P.J.1
-
50
-
-
16944365445
-
Antiviral pressure exerted by HIV-1-specific cytotoxic T lymphocytes (CTLs) during primary infection demonstrated by rapid selection of CTL escape virus
-
(1997)
Nat Med
, vol.3
, pp. 205-211
-
-
Borrow, P.1
-
51
-
-
0028911399
-
Sequence constraints and recognition by CTL of an HLA-B27-restricted HIV-1 gag epitope
-
(1995)
J Immunol
, vol.154
, pp. 2189-2197
-
-
Nietfield, W.1
-
52
-
-
0029880783
-
Cytotoxic T lymphocytes in asymptomatic long-term nonprogressing HIV-1 infection. Breadth and specificity of the response and relation to in vivo viral quasispecies in a person with prolonged infection and low viral load
-
(1996)
J Immunol
, vol.156
, pp. 2616-2623
-
-
Harrer, T.1
-
53
-
-
9444240940
-
Fine-specificity of cytotoxic T lymphocytes which recognize conserved epitopes of the Gag protein of human immunodeficiency virus type 1
-
(1996)
J Gen Virol
, vol.77
, pp. 1659-1665
-
-
Van Baalen, C.A.1
-
54
-
-
0030293534
-
Dynamics of viral variants in HIV-1 Nef and specific cytotoxic T lymphocytes in vivo
-
(1996)
J Immunol
, vol.157
, pp. 4212-4221
-
-
Haas, G.1
-
55
-
-
0032102284
-
Lack of strong immune selection pressure by the immunodominant, HLA-A*0201-restricted cytotoxic T lymphocyte response in chronic human immunodeficiency virus-1 infection
-
(1998)
J Clin Invest
, vol.101
, pp. 2559-2566
-
-
Brander, C.1
-
56
-
-
0033030988
-
Lack of viral escape and defective in vivo activation of human immunodeficiency virus type 1-specific cytotoxic T lymphocytes in rapidly progressive infection
-
(1999)
J Virol
, vol.73
, pp. 5509-5519
-
-
Hay, C.M.1
-
57
-
-
0026091971
-
In vivo persistence of a HIV-1-encoded HLA-B27-restricted cytotoxic T lymphocyte epitope despite specific in vitro reactivity
-
(1991)
Eur J Immunol
, vol.21
, pp. 2637-2640
-
-
Meyerhans, A.1
-
60
-
-
0030896539
-
Structural constraints of HIV-1 Nef may curtail escape from HLA-B7-restricted CTL recognition
-
(1997)
Immunol Lett
, vol.55
, pp. 119-122
-
-
Bauer, M.1
-
62
-
-
15444357765
-
Characterization of the peptide binding motif of a rhesus MHC class I molecule (Mamu-A*01) that binds an immunodominant CTL epitope from simian immunodeficiency virus
-
(1998)
J Immunol
, vol.160
, pp. 6062-6071
-
-
Allen, T.M.1
-
63
-
-
0034660504
-
Simian immunodeficiency virus evades a dominant epitope-specific cytotoxic T lymphocyte response through a mutation resulting in the accelerated dissociation of viral peptide and MHC class I
-
(2000)
J Immunol
, vol.164
, pp. 6474-6479
-
-
Chen, Z.W.1
-
65
-
-
0034534404
-
Temporal loss of Nefepitope CTL recognition following macaque lipopeptide immunization and SIV challenge
-
(2000)
Virology
, vol.278
, pp. 551-561
-
-
Mortara, L.1
-
66
-
-
0033852432
-
Definition of five new simian immunodeficiency virus cytotoxic T-lymphocyte epitopes and their restricting major histocompatibility complex class I molecules: Evidence for an influence on disease progression
-
(2000)
J Virol
, vol.74
, pp. 7400-7410
-
-
Evans, D.T.1
-
67
-
-
0032697315
-
Virus-specific cytotoxic T-lymphocyte responses select for amino-acid variation in simian immunodeficiency virus Env and Nef
-
(1999)
Nat Med
, vol.5
, pp. 1270-1276
-
-
Evans, D.T.1
-
68
-
-
0033548497
-
HLA and HIV-1: Heterozygote advantage and B*35-Cw*04 disadvantage
-
(1999)
Science
, vol.283
, pp. 1748-1752
-
-
Carrington, M.1
-
69
-
-
0033152036
-
New class I and II HLA alleles strongly associated with opposite patterns of progression to AIDS
-
(1999)
J Immunol
, vol.162
, pp. 6942-6946
-
-
Hendel, H.1
-
70
-
-
0034646143
-
HLA B*5701 is highly associated with restriction of virus replication in a subgroup of HIV-infected long term nonprogressors
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 2709-2714
-
-
Migueles, S.A.1
-
71
-
-
0029614377
-
Major histocompatibility complex class II DR alleles DRB1*1501 and those encoding HLA-DR13 are preferentially associated with a diminution in maternally transmitted human immunodeficiency virus 1 infection in different ethnic groups: Determination by an automated sequence-based typing method
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 12374-12378
-
-
Winchester, R.1
Chen, Y.2
Rose, S.3
Selby, J.4
Borkowsky, W.5
-
73
-
-
0032102284
-
Lack of strong immune selection pressure by the immunodominant, HLA-A*0201-restricted cytotoxic T lymphocyte response in chronic human immunodeficiency virus-1 infection
-
(1998)
J Clin Invest
, vol.101
, pp. 2559-2566
-
-
Brander, C.1
-
74
-
-
0032757187
-
Efficient processing of the immunodominant, HLA-A*0201-restricted human immunodeficiency virus type 1 cytotoxic T-lymphocyte epitope despite multiple variations in the epitope flanking sequences
-
(1999)
J Virol
, vol.73
, pp. 10191-10198
-
-
Brander, C.1
-
75
-
-
0032543212
-
Subity does not correlate with the hierarchy of virus-specific cytotoxic T cell responses to naturally processed peptides
-
(1998)
J Exp Med
, vol.187
, pp. 1647-1657
-
-
Goulder, P.J.1
-
76
-
-
0035078787
-
Route of simian immunodeficiency virus inoculation determines the complexity but not the identity of viral variant populations that infect rhesus macaques
-
(2001)
J Virol
, vol.75
, pp. 3753-3765
-
-
Greenier, J.L.1
-
77
-
-
0028922694
-
A maximum-likelihood approach to analyzing nonoverlapping and overlapping reading frames
-
(1995)
J Mol Evol
, vol.40
, pp. 181-189
-
-
Hein, J.1
Stovlbaek, J.2
-
82
-
-
0034877976
-
Simultaneous positive and purifying selection on overlapping reading frames of the Tat and vpr genes of simian immunodeficiency virus
-
(2001)
J Virol
, vol.75
, pp. 7966-7972
-
-
Hughes, A.1
-
85
-
-
0030589236
-
Analysis of cytotoxic T cell responses to dominant and subdominant epitopes during acute and chronic lymphocytic choriomeningitis virus infection
-
(1996)
J Immunol
, vol.157
, pp. 5543-5554
-
-
Van der Most, R.G.1
-
89
-
-
0031846317
-
Resistance-associated loss of viral fitness in human immunodeficiency virus type 1: Phenotypic analysis of protease and gag coevolution in protease inhibitor-treated patients
-
(1998)
J Virol
, vol.72
, pp. 7632-7637
-
-
Mammano, F.1
Petit, C.2
Clavel, F.3
-
91
-
-
0035158709
-
Establishment of new transmissible and drug-sensitive human immunodeficiency virus type 1 wild types due to transmission of nucleoside analogue-resistant virus
-
(2001)
J Virol
, vol.75
, pp. 595-602
-
-
De Ronde, A.1
-
92
-
-
0031948662
-
Altered drug sensitivity, fitness, and evolution of human immunodeficiency virus type 1 with pol gene mutations conferring multidideoxynucleoside resistance
-
(1998)
J Infect Dis
, vol.177
, pp. 1207-1213
-
-
Maeda, Y.1
Venzon, D.J.2
Mitsuya, H.3
-
94
-
-
0032581588
-
Sexual transmission of an HIV-1 variant resistant to multiple reverse-transcriptase and protease inhibitors
-
(1998)
N Engl J Med
, vol.339
, pp. 307-311
-
-
Hecht, F.M.1
-
97
-
-
0035808775
-
Clustered mutations in HIV-1 gag are consistently required for escape from HLA-B27-restricted cytotoxic T lymphocyte responses
-
(2001)
J Exp Med
, vol.193
, pp. 375-386
-
-
Kelleher, A.D.1
-
98
-
-
0034660504
-
Simian immunodeficiency virus evades a dominant epitope-specific cytotoxic T lymphocyte response through a mutation resulting in the accelerated dissociation of viral peptide and MHC class I
-
(2000)
J Immunol
, vol.164
, pp. 6474-6479
-
-
Chen, Z.W.1
-
99
-
-
0034699512
-
Tat-specific cytotoxic T lymphocytes select for SIV escape variants during resolution of primary viraemia
-
(2000)
Nature
, vol.407
, pp. 386-390
-
-
Allen, T.M.1
|