-
1
-
-
0031950437
-
Complex structure of knob DNA on maize chromosome 9. Retrotransposon invasion into heterochromatin
-
1. Ananiev EV, Phillips RL, Rines HW. 1998. Complex structure of knob DNA on maize chromosome 9. Retrotransposon invasion into heterochromatin. Genetics 149:2025-37
-
(1998)
Genetics
, vol.149
, pp. 2025-2037
-
-
Ananiev, E.V.1
Phillips, R.L.2
Rines, H.W.3
-
3
-
-
51249171246
-
Nuclear DNA content of some important plant species
-
3. Arumuganathan K, Earle ED. 1991. Nuclear DNA content of some important plant species. Plant Mol. Biol. Rep. 9:208-19
-
(1991)
Plant Mol. Biol. Rep.
, vol.9
, pp. 208-219
-
-
Arumuganathan, K.1
Earle, E.D.2
-
4
-
-
0030482085
-
Gene identification in a complex chromosomal continuum by local genomic cross-referencing
-
4. Avramova Z, Tikhonov A, SanMiguel P, Jin YK, Lui C, et al. 1996. Gene identification in a complex chromosomal continuum by local genomic cross-referencing. Plant J. 10:1163-68
-
(1996)
Plant J.
, vol.10
, pp. 1163-1168
-
-
Avramova, Z.1
Tikhonov, A.2
SanMiguel, P.3
Jin, Y.K.4
Lui, C.5
-
5
-
-
0030246842
-
The contributions of retroelements to plant genome organisation, function and evolution
-
5. Bennetzen JL. 1996. The contributions of retroelements to plant genome organisation, function and evolution. Trends Microbiol. 4:347-53
-
(1996)
Trends Microbiol.
, vol.4
, pp. 347-353
-
-
Bennetzen, J.L.1
-
6
-
-
0032035079
-
The structure and evolution of angiosperm nuclear genomes
-
6. Bennetzen JL. 1998. The structure and evolution of angiosperm nuclear genomes. Curr. Opin. Plant Biol 1:103-8
-
(1998)
Curr. Opin. Plant Biol
, vol.1
, pp. 103-108
-
-
Bennetzen, J.L.1
-
7
-
-
0008882478
-
Transposable element contributions to plant gene and genome evolution
-
In press
-
7. Bennetzen JL. 1999. Transposable element contributions to plant gene and genome evolution. Plant Mol. Biol. In press
-
(1999)
Plant Mol. Biol.
-
-
Bennetzen, J.L.1
-
8
-
-
0000637348
-
Do plants have a one-way ticket to genomic obesity?
-
8. Bennetzen JL, Kellogg EA. 1997. Do plants have a one-way ticket to genomic obesity? Plant Cell 9:1509-14
-
(1997)
Plant Cell
, vol.9
, pp. 1509-1514
-
-
Bennetzen, J.L.1
Kellogg, E.A.2
-
9
-
-
0028485631
-
Active maize genes are unmodified and flanked by diverse classes of modified, highly repetitive DNA
-
9. Bennetzen JL, Schrick K, Springer PS, Brown WE, SanMiguel P. 1994. Active maize genes are unmodified and flanked by diverse classes of modified, highly repetitive DNA. Genome 37:565-76
-
(1994)
Genome
, vol.37
, pp. 565-576
-
-
Bennetzen, J.L.1
Schrick, K.2
Springer, P.S.3
Brown, W.E.4
SanMiguel, P.5
-
11
-
-
0006922663
-
Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana
-
11. Bevan M, Bancroft I, Bent E, Love K, Goodman H, et al. 1998. Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana. Nature 391:485-88
-
(1998)
Nature
, vol.391
, pp. 485-488
-
-
Bevan, M.1
Bancroft, I.2
Bent, E.3
Love, K.4
Goodman, H.5
-
12
-
-
0031149435
-
A copia-ke retrotransposon Tgmr closely linked to the Rps1-k allele that confers race-specific resistance of soybean to Phytophthora sojae
-
12. Bhattacharyya MK, Gonzales RA, Kraft M, Buzzell RI. 1997. A copia-ke retrotransposon Tgmr closely linked to the Rps1-k allele that confers race-specific resistance of soybean to Phytophthorasojae. Plant Mol. Biol. 34:255-64
-
(1997)
Plant Mol. Biol.
, vol.34
, pp. 255-264
-
-
Bhattacharyya, M.K.1
Gonzales, R.A.2
Kraft, M.3
Buzzell, R.I.4
-
13
-
-
0002949584
-
Retrotransposons and FB elements from Drosophila melanogaster
-
ed. by DE Berg, MM Howe, Washington, DC: Am. Soc. Microbiol.
-
13. Bingham PM, Zachar Z. 1989. Retrotransposons and FB elements from Drosophila melanogaster. In Mobile DNA, ed. by DE Berg, MM Howe, pp. 485-502. Washington, DC: Am. Soc. Microbiol.
-
(1989)
Mobile DNA
, pp. 485-502
-
-
Bingham, P.M.1
Zachar, Z.2
-
14
-
-
0029084867
-
Pervasive migration of organellar DNA to the nucleus in plants
-
14. Blanchard JL, Schmidt GW. 1995. Pervasive migration of organellar DNA to the nucleus in plants. J. Mol. Biol. 41:397-406
-
(1995)
J. Mol. Biol.
, vol.41
, pp. 397-406
-
-
Blanchard, J.L.1
Schmidt, G.W.2
-
15
-
-
0031135862
-
LINEs and Alus - The polyA connection
-
15. Boeke JD. 1997. LINEs and Alus - the polyA connection. Nat. Genet. 16:6-7
-
(1997)
Nat. Genet.
, vol.16
, pp. 6-7
-
-
Boeke, J.D.1
-
16
-
-
0024470037
-
Transcription and reverse-transcription of retrotransposons
-
16. Boeke JD, Corces VG. 1989. Transcription and reverse-transcription of retrotransposons. Annu. Rev. Microbiol. 43:403-34
-
(1989)
Annu. Rev. Microbiol.
, vol.43
, pp. 403-434
-
-
Boeke, J.D.1
Corces, V.G.2
-
17
-
-
0031046820
-
Comparative analysis of the chromosomal and genomic organization of Ty1-copia-like retrotransposons in pteridophytes, gymnosperms and angiosperms
-
17. Brandes A, Heslop-Harrison JS, Kamm A, Kubis S, Doudrick RL, Schmidt T. 1997. Comparative analysis of the chromosomal and genomic organization of Ty1-copia-like retrotransposons in pteridophytes, gymnosperms and angiosperms. Plant Mol. Biol. 33:11-21
-
(1997)
Plant Mol. Biol.
, vol.33
, pp. 11-21
-
-
Brandes, A.1
Heslop-Harrison, J.S.2
Kamm, A.3
Kubis, S.4
Doudrick, R.L.5
Schmidt, T.6
-
18
-
-
0028301318
-
Transduction of a cellular genes by a plant retroelement
-
18. Bureau TE, White SE, Wessier SR. 1994. Transduction of a cellular genes by a plant retroelement. Cell 77:479-80
-
(1994)
Cell
, vol.77
, pp. 479-480
-
-
Bureau, T.E.1
White, S.E.2
Wessler, S.R.3
-
19
-
-
0029743043
-
A computer-based systematic survey reveals the predominance of small invertedrepeat elements in wild-type rice genes
-
19. Bureau TE, Ronald PC, Wessler SR. 1996. A computer-based systematic survey reveals the predominance of small invertedrepeat elements in wild-type rice genes. Proc. Natl Acad. Sci. USA 93:8524-29
-
(1996)
Proc. Natl Acad. Sci. USA
, vol.93
, pp. 8524-8529
-
-
Bureau, T.E.1
Ronald, P.C.2
Wessler, S.R.3
-
20
-
-
0025162761
-
Occurrence of a copialike transposable element in one of the introns of the potato starch phosphorylase gene
-
20. Camirand A, St-Pierre B, Morineau C, Brisson N. 1990. Occurrence of a copialike transposable element in one of the introns of the potato starch phosphorylase gene. Mol Gen. Genet. 224:33-39
-
(1990)
Mol Gen. Genet.
, vol.224
, pp. 33-39
-
-
Camirand, A.1
St-Pierre, B.2
Morineau, C.3
Brisson, N.4
-
22
-
-
0027160035
-
Characterisations of LTR sequences involved in the protoplast specific expression of the tobacco Tnt1 retrotransposon
-
22. Casacuberta JM, Grandbastien MA. 1993. Characterisations of LTR sequences involved in the protoplast specific expression of the tobacco Tnt1 retrotransposon. Nucleic Acid Res. 21:2087-93
-
(1993)
Nucleic Acid Res.
, vol.21
, pp. 2087-2093
-
-
Casacuberta, J.M.1
Grandbastien, M.A.2
-
24
-
-
0032080884
-
Structure and evolution of Cyclops: A novel giant retrotransposon of the Ty3/Gypsy family highly amplified in pea and other legume species
-
24. Chavanne F, Zhang DX, Liaud MF, Cerff R. 1998. Structure and evolution of Cyclops: a novel giant retrotransposon of the Ty3/Gypsy family highly amplified in pea and other legume species. Plant Mol. Biol. 37:363-75
-
(1998)
Plant Mol. Biol.
, vol.37
, pp. 363-375
-
-
Chavanne, F.1
Zhang, D.X.2
Liaud, M.F.3
Cerff, R.4
-
25
-
-
0031908204
-
Sequence organization and conservation in sh2/al-homologous regions of sorghum and rice
-
25. Chen M, SanMiguel P, Bennetzen JL. 1998. Sequence organization and conservation in sh2/al-homologous regions of sorghum and rice. Genetics 148:435-43
-
(1998)
Genetics
, vol.148
, pp. 435-443
-
-
Chen, M.1
SanMiguel, P.2
Bennetzen, J.L.3
-
26
-
-
0032559061
-
Targeting of human retrotransposon integration is directed by the specificity of the L1 endonuclease for regions of unusual DNA structure
-
26. Cost GJ, Boeke JD. 1998. Targeting of human retrotransposon integration is directed by the specificity of the L1 endonuclease for regions of unusual DNA structure. Biochemistry 37:18081-93
-
(1998)
Biochemistry
, vol.37
, pp. 18081-18093
-
-
Cost, G.J.1
Boeke, J.D.2
-
27
-
-
0031006969
-
Target site selection in transposition
-
27. Craig NL. 1998. Target site selection in transposition. Annu. Rev. Biochem. 66: 437-74
-
(1998)
Annu. Rev. Biochem.
, vol.66
, pp. 437-474
-
-
Craig, N.L.1
-
28
-
-
0028980488
-
Analysis of Copia sequences variation within and between Drosophila species
-
28. Csink AK, McDonald JF. 1995. Analysis of Copia sequences variation within and between Drosophila species. Mol. Biol. Evol. 12:83-93
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 83-93
-
-
Csink, A.K.1
McDonald, J.F.2
-
29
-
-
0033083144
-
New lines of host defense: Inhibition of Ty1 retrotransposon by Fus3p and NER/TFIIH
-
29. Curcio MJ, Garfinkel DJ. 1999. New lines of host defense: inhibition of Ty1 retrotransposon by Fus3p and NER/TFIIH. Trend Genet. 15:43-45
-
(1999)
Trend Genet.
, vol.15
, pp. 43-45
-
-
Curcio, M.J.1
Garfinkel, D.J.2
-
30
-
-
0030999937
-
Promoting in tandem: The promoter for telomere transposon HeT-A and implications for the evolution of retroviral LTRs
-
30. Danilevskaya ON, Arkhipova JR, Traverse KL, Pardue ML. 1997. Promoting in tandem: the promoter for telomere transposon HeT-A and implications for the evolution of retroviral LTRs. Cell 88:647-55
-
(1997)
Cell
, vol.88
, pp. 647-655
-
-
Danilevskaya, O.N.1
Arkhipova, J.R.2
Traverse, K.L.3
Pardue, M.L.4
-
32
-
-
0027934527
-
An analysis of retroposition in plants based on a family of SINEs from Brassica napus
-
32. Deragon JM, Landry BS, Pelissier T, Tutois S, Tourmente S, Picard G. 1994. An analysis of retroposition in plants based on a family of SINEs from Brassica napus. J. Mol. Evol. 39:378-86
-
(1994)
J. Mol. Evol.
, vol.39
, pp. 378-386
-
-
Deragon, J.M.1
Landry, B.S.2
Pelissier, T.3
Tutois, S.4
Tourmente, S.5
Picard, G.6
-
33
-
-
0028618784
-
Spatially regulated expression of retroviruses-like transposons during Drosophila melanogaster embryogenesis
-
33. Ding D, Lipshitz H. 1994. Spatially regulated expression of retroviruses-like transposons during Drosophila melanogaster embryogenesis. Genet. Res. 64:167-81
-
(1994)
Genet. Res.
, vol.64
, pp. 167-181
-
-
Ding, D.1
Lipshitz, H.2
-
34
-
-
0018894384
-
Selfish genes, the phenotype paradigm and genome evolution
-
34. Doolittle WF, Sapienza C. 1980. Selfish genes, the phenotype paradigm and genome evolution. Nature 284:601-3
-
(1980)
Nature
, vol.284
, pp. 601-603
-
-
Doolittle, W.F.1
Sapienza, C.2
-
35
-
-
0000244509
-
Transposition pattern of the maize element Ac from the bz-m2 (Ac) allele
-
35. Dooner HK, Belachew A. 1989. Transposition pattern of the maize element Ac from the bz-m2 (Ac) allele. Genetics 122:447-57
-
(1989)
Genetics
, vol.122
, pp. 447-457
-
-
Dooner, H.K.1
Belachew, A.2
-
36
-
-
0028286165
-
Expansions of transgene repeats cause heterochromatin formation and gene silencing in Drosophila
-
36. Dorer D, Henikoff S. 1994. Expansions of transgene repeats cause heterochromatin formation and gene silencing in Drosophila. Cell 77:993-1002
-
(1994)
Cell
, vol.77
, pp. 993-1002
-
-
Dorer, D.1
Henikoff, S.2
-
37
-
-
0023197108
-
A plant processed pseudogene
-
37. Drouin G, Dover GA. 1987. A plant processed pseudogene. Nature 328:557-58
-
(1987)
Nature
, vol.328
, pp. 557-558
-
-
Drouin, G.1
Dover, G.A.2
-
38
-
-
0029976290
-
Characterization of four dispersed repetitive DNA sequences in Zea mays and their use in constructing contiguous DNA fragments using YAC clones
-
38. Edwards KJ, Veuskens J, Rawles H, Daly A, Bennetzen JL. 1996. Characterization of four dispersed repetitive DNA sequences in Zea mays and their use in constructing contiguous DNA fragments using YAC clones. Genome 39:811-17
-
(1996)
Genome
, vol.39
, pp. 811-817
-
-
Edwards, K.J.1
Veuskens, J.2
Rawles, H.3
Daly, A.4
Bennetzen, J.L.5
-
39
-
-
0026862794
-
Transposing without end: The non-LTR retrotransposable elements
-
39. Eickbush TH. 1992. Transposing without end: the non-LTR retrotransposable elements. New Biol. 4:430-40
-
(1992)
New Biol.
, vol.4
, pp. 430-440
-
-
Eickbush, T.H.1
-
40
-
-
0030848018
-
Telomerase and retrotransposons: Which came first?
-
40. Eickbush TH. 1997. Telomerase and retrotransposons: Which came first? Science 277:911-12
-
(1997)
Science
, vol.277
, pp. 911-912
-
-
Eickbush, T.H.1
-
41
-
-
0031782964
-
Polymorphism of insertion sites of Ty1-copia class retrotransposons and its use for linkage and diversity analysis in pea
-
41. Ellis THN, Poyser SJ, Knox MR, Vershinin AV, Ambrose MJ. 1998. Polymorphism of insertion sites of Ty1-copia class retrotransposons and its use for linkage and diversity analysis in pea. Mol. Gen. Genet. 260:9-19
-
(1998)
Mol. Gen. Genet.
, vol.260
, pp. 9-19
-
-
Ellis, T.H.N.1
Poyser, S.J.2
Knox, M.R.3
Vershinin, A.V.4
Ambrose, M.J.5
-
42
-
-
0025240887
-
Functional heterogeneity of a large family of human LTR-like promoters and enhancers
-
42. Feuchter A, Mager D. 1990. Functional heterogeneity of a large family of human LTR-like promoters and enhancers. Nucleic Acids Res. 18:1261-70
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 1261-1270
-
-
Feuchter, A.1
Mager, D.2
-
43
-
-
0030903408
-
Retrovirus-like end processing of the tobacco Tnt1 retrotransposon linear intermediates of replication
-
43. Feuerbach F, Drouaud J, Lucas H. 1997. Retrovirus-like end processing of the tobacco Tnt1 retrotransposon linear intermediates of replication. J. Virol. 71:4005-15
-
(1997)
J. Virol.
, vol.71
, pp. 4005-4015
-
-
Feuerbach, F.1
Drouaud, J.2
Lucas, H.3
-
44
-
-
0016351896
-
Genome size and proportion of repeated nucleotide sequence DNA in plants
-
44. Flavell RB, Bennet MD, Smith JB, Smith DB. 1974. Genome size and proportion of repeated nucleotide sequence DNA in plants. Biochim. Genet. 12:257-69
-
(1974)
Biochim. Genet.
, vol.12
, pp. 257-269
-
-
Flavell, R.B.1
Bennet, M.D.2
Smith, J.B.3
Smith, D.B.4
-
45
-
-
0026516955
-
Extreme heterogeneity of Ty1-copia group retrotransposons in plants
-
45. Flavell AJ, Smith DB, Kumar A. 1992. Extreme heterogeneity of Ty1-copia group retrotransposons in plants. Mol. Gen. Genet. 231:233-42
-
(1992)
Mol. Gen. Genet.
, vol.231
, pp. 233-242
-
-
Flavell, A.J.1
Smith, D.B.2
Kumar, A.3
-
46
-
-
0026741959
-
Ty1-copia group retrotransposons are ubiquitous and heterogeneous in higher plants
-
46. Flavell AJ, Dunbar E, Anderson R, Pearce SR, Hartley R, Kumar A. 1992. Ty1-copia group retrotransposons are ubiquitous and heterogeneous in higher plants. Nucleic Acids Res. 20:3639-44
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 3639-3644
-
-
Flavell, A.J.1
Dunbar, E.2
Anderson, R.3
Pearce, S.R.4
Hartley, R.5
Kumar, A.6
-
47
-
-
0032409406
-
Retrotransposon-based insertion polymorphisms (RBIP) for high throughput marker analysis
-
47. Flavell AJ, Knox MR, Pearce SR, Ellis THN. 1998. Retrotransposon-based insertion polymorphisms (RBIP) for high throughput marker analysis. Plant J. 16: 643-50
-
(1998)
Plant J.
, vol.16
, pp. 643-650
-
-
Flavell, A.J.1
Knox, M.R.2
Pearce, S.R.3
Ellis, T.H.N.4
-
50
-
-
0032086911
-
A single amino acid change in the yeast retrotransposon Ty5 abolishes targeting to silent chromatin
-
50. Gai X, Voytas DF. 1998. A single amino acid change in the yeast retrotransposon Ty5 abolishes targeting to silent chromatin. Mol. Cell 1:1051-55
-
(1998)
Mol. Cell
, vol.1
, pp. 1051-1055
-
-
Gai, X.1
Voytas, D.F.2
-
51
-
-
0033103333
-
The Tpv2 family of retrotransposons of Phaseolus vulgaris: Structure, integration characteristics, and use for genotype classification
-
51. Garber K, Bilic I, Pusch O, Tohme J, Bachmair A, et al. 1999. The Tpv2 family of retrotransposons of Phaseolus vulgaris: structure, integration characteristics, and use for genotype classification. Plant Mol. Biol. 39:797-807
-
(1999)
Plant Mol. Biol.
, vol.39
, pp. 797-807
-
-
Garber, K.1
Bilic, I.2
Pusch, O.3
Tohme, J.4
Bachmair, A.5
-
53
-
-
0033000234
-
S1 SINE retroposons are methylated at symmetrical and non-symmetrical positions in Brassica napus: Identification of preferred target site for asymmetrical methylation
-
53. Goubely C, Arnaud P, Tatout C, Heslop-Harrison JS, Deragon J-M. 1999. S1 SINE retroposons are methylated at symmetrical and non-symmetrical positions in Brassica napus: identification of preferred target site for asymmetrical methylation. J. Mol. Biol. 39:243-55
-
(1999)
J. Mol. Biol.
, vol.39
, pp. 243-255
-
-
Goubely, C.1
Arnaud, P.2
Tatout, C.3
Heslop-Harrison, J.S.4
Deragon, J.-M.5
-
54
-
-
0026544795
-
Retroelements in higher-plants
-
54. Grandbastien M-A. 1992. Retroelements in higher-plants. Trends Genet. 8:103-8
-
(1992)
Trends Genet.
, vol.8
, pp. 103-108
-
-
Grandbastien, M.-A.1
-
55
-
-
0032080772
-
Activation of plant retrotransposons under stress conditions
-
55. Grandbastien M-A. 1998. Activation of plant retrotransposons under stress conditions. Trends Plant Sci. 3:181-87
-
(1998)
Trends Plant Sci.
, vol.3
, pp. 181-187
-
-
Grandbastien, M.-A.1
-
56
-
-
0024978849
-
Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics
-
56. Grandbastien M-A, Spielmann A, Caboche M. 1989. Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics. Nature 337:376-80
-
(1989)
Nature
, vol.337
, pp. 376-380
-
-
Grandbastien, M.-A.1
Spielmann, A.2
Caboche, M.3
-
57
-
-
0032766092
-
Phylogeny and transpositional activity of Ty1-copia group retrotransposons in cereal genomes
-
57. Gribbon BM, Pearce SR, Kalendar R, Schulman A, Paulin L, et al. 1999. Phylogeny and transpositional activity of Ty1 -copia group retrotransposons in cereal genomes. Mol. Gen. Genet. 261:883-91
-
(1999)
Mol. Gen. Genet.
, vol.261
, pp. 883-891
-
-
Gribbon, B.M.1
Pearce, S.R.2
Kalendar, R.3
Schulman, A.4
Paulin, L.5
-
58
-
-
0032076121
-
Yeast heterochromatin: Regulation of its assembly and inheritance by histones
-
58. Grunstein M. 1998. Yeast heterochromatin: regulation of its assembly and inheritance by histones. Cell 93:325-28
-
(1998)
Cell
, vol.93
, pp. 325-328
-
-
Grunstein, M.1
-
59
-
-
0018896704
-
The genome of Zea mays, its organization and homology to related grasses
-
59. Hake S, Walbot V. 1980. The genome of Zea mays, its organization and homology to related grasses. Chromosoma 79:251-70
-
(1980)
Chromosoma
, vol.79
, pp. 251-270
-
-
Hake, S.1
Walbot, V.2
-
60
-
-
0032076639
-
Trans-sensing effects
-
60. Henikoff S, Comai L. 1998. Trans-sensing effects. Cell 93:329-32
-
(1998)
Cell
, vol.93
, pp. 329-332
-
-
Henikoff, S.1
Comai, L.2
-
61
-
-
6844258847
-
The Chromosomal distributions of Ty1-copia group retrotransposable elements in higher plants and their implications for genome evolution
-
61. Heslop-Harrison JS, Brandes A, Taketa S, Schmidt T, Vershinin AV, et al. 1997. The Chromosomal distributions of Ty1-copia group retrotransposable elements in higher plants and their implications for genome evolution. Genetica 100:197-204
-
(1997)
Genetica
, vol.100
, pp. 197-204
-
-
Heslop-Harrison, J.S.1
Brandes, A.2
Taketa, S.3
Schmidt, T.4
Vershinin, A.V.5
-
62
-
-
0031010332
-
Zepp, a LINE-like retrotransposon accumulated in the Chlorella telomeric region
-
62. Higashiyama T, Noutoshi Y, Fujie M, Yamada T. 1995. Zepp, a LINE-like retrotransposon accumulated in the Chlorella telomeric region. EMBO J. 16:3715-23
-
(1995)
EMBO J.
, vol.16
, pp. 3715-3723
-
-
Higashiyama, T.1
Noutoshi, Y.2
Fujie, M.3
Yamada, T.4
-
63
-
-
0027976554
-
Retrotransposition of a plant SINE into the wx locus during evolution of rice
-
63. Hirano HY, Mochizuki K, Umeda M, Ohtsubo H, Ohtsubo E, Sano Y 1994. Retrotransposition of a plant SINE into the wx locus during evolution of rice. J. Mol. Evol. 38:132-37
-
(1994)
J. Mol. Evol.
, vol.38
, pp. 132-137
-
-
Hirano, H.Y.1
Mochizuki, K.2
Umeda, M.3
Ohtsubo, H.4
Ohtsubo, E.5
Sano, Y.6
-
64
-
-
0027168422
-
Activation of tobacco retrotransposons during tissue-culture
-
64. Hirochika H. 1993. Activation of tobacco retrotransposons during tissue-culture. EMBOJ. 12:2521-28
-
(1993)
EMBOJ.
, vol.12
, pp. 2521-2528
-
-
Hirochika, H.1
-
65
-
-
0031238581
-
Retrotransposons of rice: Their regulation and use for genome analysis
-
65. Hirochika H. 1997. Retrotransposons of rice: their regulation and use for genome analysis. Plant Mol Biol. 35:231-40
-
(1997)
Plant Mol Biol.
, vol.35
, pp. 231-240
-
-
Hirochika, H.1
-
67
-
-
0008955723
-
Silencing of the tobacco retrotransposon Tto1 in Arabidopsis and reactivation by DNA hypomethylation mutation
-
In press
-
67. Hirochika H, Kakutani T, Okamoto H. 1999. Silencing of the tobacco retrotransposon Tto1 in Arabidopsis and reactivation by DNA hypomethylation mutation. Plant Cell. In press
-
(1999)
Plant Cell
-
-
Hirochika, H.1
Kakutani, T.2
Okamoto, H.3
-
68
-
-
0028809948
-
Extra chromosomal circular forms of the tobacco retrotransposon Tto1
-
68. Hirochika H, Otsuki H. 1995. Extra chromosomal circular forms of the tobacco retrotransposon Tto1. Gene 165:229-32
-
(1995)
Gene
, vol.165
, pp. 229-232
-
-
Hirochika, H.1
Otsuki, H.2
-
69
-
-
0030119207
-
Autonomous transposition of the tobacco retrotransposon Tto1 in rice
-
69. Hirochika H, Otsuki H, Yoshikawa M, Otsuki Y, Sugimoto K, Takeda S. 1996. Autonomous transposition of the tobacco retrotransposon Tto1 in rice. Plant Cell 8:725-34
-
(1996)
Plant Cell
, vol.8
, pp. 725-734
-
-
Hirochika, H.1
Otsuki, H.2
Yoshikawa, M.3
Otsuki, Y.4
Sugimoto, K.5
Takeda, S.6
-
70
-
-
0029824259
-
Retrotransposons of rice involved in mutations induced by tissue culture
-
70. Hirochika H, Sugimoto K, Otsuki Y, Tsugawa H, Kanda M. 1996. Retrotransposons of rice involved in mutations induced by tissue culture. Proc. Natl. Acad. Sci. USA 93:7783-88
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 7783-7788
-
-
Hirochika, H.1
Sugimoto, K.2
Otsuki, Y.3
Tsugawa, H.4
Kanda, M.5
-
72
-
-
0029084336
-
Zeon-1, a member of a new maize retrotransposon family
-
72. Hu W, Das OP, Messing J. 1995. Zeon-1, a member of a new maize retrotransposon family. Mol. Gen. Genet. 248:471-80
-
(1995)
Mol. Gen. Genet.
, vol.248
, pp. 471-480
-
-
Hu, W.1
Das, O.P.2
Messing, J.3
-
73
-
-
0025352557
-
Genetic mapping and characterization of sorghum and related crops by means of maize DNA probes
-
73. Hulbert SH, Richter TE, Axtell JD, Bennetzen JL. 1990. Genetic mapping and characterization of sorghum and related crops by means of maize DNA probes. Proc. Natl. Acad. Sci. USA 87:4251-55
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 4251-4255
-
-
Hulbert, S.H.1
Richter, T.E.2
Axtell, J.D.3
Bennetzen, J.L.4
-
74
-
-
0033059511
-
p-SINE1-like intron of the CatA catalase homologs and phylogenetic relationships among AA-genome Oryza and related species
-
74. Iwamoto M, Nagashima H, Nagamine T, Higo H, Higo K. 1999. p-SINE1 - like intron of the CatA catalase homologs and phylogenetic relationships among AA-genome Oryza and related species. Theor. Appl. Genet. 98:853-61
-
(1999)
Theor. Appl. Genet.
, vol.98
, pp. 853-861
-
-
Iwamoto, M.1
Nagashima, H.2
Nagamine, T.3
Higo, H.4
Higo, K.5
-
75
-
-
0032954098
-
Taming of retrotransposable elements by homology-dependent gene silencing
-
75. Jensen S,Gassama MP, Heidmann T. 1999. Taming of retrotransposable elements by homology-dependent gene silencing. Nat. Genet. 21:209-12
-
(1999)
Nat. Genet.
, vol.21
, pp. 209-212
-
-
Jensen, S.1
Gassama, M.P.2
Heidmann, T.3
-
76
-
-
0024712976
-
Structure and coding properties of Bs1, a maize retrovirus-like transposon
-
76. Jin Y-K, Bennetzen JL. 1989. Structure and coding properties of Bs1, a maize retrovirus-like transposon. Proc. Natl. Acad. Sci. USA 86:6235-39
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 6235-6239
-
-
Jin, Y.-K.1
Bennetzen, J.L.2
-
77
-
-
0028485954
-
Integration and non-random mutation of a plasma membrane proton ATPase gene fragment within the Bs1 retroelement of maize
-
77. Jin Y-K, Bennetzen JL. 1994. Integration and non-random mutation of a plasma membrane proton ATPase gene fragment within the Bs1 retroelement of maize. Plant Cell 6:1177-86
-
(1994)
Plant Cell
, vol.6
, pp. 1177-1186
-
-
Jin, Y.-K.1
Bennetzen, J.L.2
-
78
-
-
0022066036
-
A low copy number, copia-like transposon in maize
-
78. Johns MA, Mottinger J, Freeling M. 1985. A low copy number, copia-like transposon in maize. EMBO J. 4:1093-102
-
(1985)
EMBO J.
, vol.4
, pp. 1093-1102
-
-
Johns, M.A.1
Mottinger, J.2
Freeling, M.3
-
79
-
-
0031749010
-
Evidence for the role of recombination in regulatory evolution of Saccharomyces cerevisiae Ty elements
-
79. Jordan IK, McDonald JF. 1998. Evidence for the role of recombination in regulatory evolution of Saccharomyces cerevisiae Ty elements. J. Mol Evol 47:14-20
-
(1998)
J. Mol Evol
, vol.47
, pp. 14-20
-
-
Jordan, I.K.1
McDonald, J.F.2
-
80
-
-
0032926608
-
Tempo and mode of Ty element evolution in Saccharomyces cerevisiae
-
80. Jordan IK, McDonald JF. 1999. Tempo and mode of Ty element evolution in Saccharomyces cerevisiae. Genetics 151:1341-51
-
(1999)
Genetics
, vol.151
, pp. 1341-1351
-
-
Jordan, I.K.1
McDonald, J.F.2
-
82
-
-
0032943978
-
IRAP and REMAP: Two new retrotransposon-based DNA fingerprinting techniques
-
81. Kalendar R, Grob T, Regina M, Suoniemi A, Schulman A. 1999. IRAP and REMAP: Two new retrotransposon-based DNA fingerprinting techniques. Theor. Appl. Genet. 98:704-11
-
(1999)
Theor. Appl. Genet.
, vol.98
, pp. 704-711
-
-
Kalendar, R.1
Grob, T.2
Regina, M.3
Suoniemi, A.4
Schulman, A.5
-
83
-
-
0029920981
-
The genomic and physical organisation of Ty1-copia-like sequences as a component of large genomes in Pinus elliottii var. Elliottii and other gymnosperms
-
82. Kamm A, Doudrick RL, Heslop-Harrison JS, Schmidt T. 1996. The genomic and physical organisation of Ty1-copia-like sequences as a component of large genomes in Pinus elliottii var. elliottii and other gymnosperms. Proc. Natl. Acad. Sci. USA 93:2708-13
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 2708-2713
-
-
Kamm, A.1
Doudrick, R.L.2
Heslop-Harrison, J.S.3
Schmidt, T.4
-
84
-
-
0030113185
-
Chromosomal and genomic organisation of Ty1-copia-like retrotransposon sequences in the genus Avena
-
83. Katsiotis A, Schmidt T, Heslop-Harrison JS. 1996. Chromosomal and genomic organisation of Ty1-copia-like retrotransposon sequences in the genus Avena. Genome 39:410-17
-
(1996)
Genome
, vol.39
, pp. 410-417
-
-
Katsiotis, A.1
Schmidt, T.2
Heslop-Harrison, J.S.3
-
85
-
-
0345646461
-
Transposons in filamentous fungi-facts and perspectives
-
84. Kempken F, Kuck U. 1998. Transposons in filamentous fungi-facts and perspectives. BioEssays 20:652-59
-
(1998)
BioEssays
, vol.20
, pp. 652-659
-
-
Kempken, F.1
Kuck, U.2
-
86
-
-
0032934835
-
Isolation and characterisation of Tnd-1, a retrotransposon marker linked to black root resistance in tobacco
-
85. Kenward KD, Bai D, Ban MR, Brandle JE. 1999. Isolation and characterisation of Tnd-1, a retrotransposon marker linked to black root resistance in tobacco. Theor. Appl. Genet. 98:387-95
-
(1999)
Theor. Appl. Genet.
, vol.98
, pp. 387-395
-
-
Kenward, K.D.1
Bai, D.2
Ban, M.R.3
Brandle, J.E.4
-
87
-
-
0030860770
-
Transposable elements as sources of variation in animals and plants
-
86. Kidwell MG, Lisch D. 1997. Transposable elements as sources of variation in animals and plants. Proc. Natl. Acad. Sci. USA 94:7704-11
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 7704-7711
-
-
Kidwell, M.G.1
Lisch, D.2
-
88
-
-
0031832807
-
Transposable elements and genome organisation: A comparative survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence
-
87. Kirn JM, Vanguri S, Boeke JD, Gabriel A, Voytas DF. 1998. Transposable elements and genome organisation: A comparative survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence. Genome Res. 8:464-78
-
(1998)
Genome Res.
, vol.8
, pp. 464-478
-
-
Kim, J.M.1
Vanguri, S.2
Boeke, J.D.3
Gabriel, A.4
Voytas, D.F.5
-
89
-
-
0028936732
-
Requirement of RNA-polymerase-III transcription factors for in vitro position-specific integration of a retrovirus-like element
-
88. Kirchner J, Connolly CM, Sandmeyer SB 1995. Requirement of RNA-polymerase-III transcription factors for in vitro position-specific integration of a retrovirus-like element. Science 267:1488-91
-
(1995)
Science
, vol.267
, pp. 1488-1491
-
-
Kirchner, J.1
Connolly, C.M.2
Sandmeyer, S.B.3
-
91
-
-
0033082662
-
IFG, a gypsy-like retrotransposon in Pinus (Pinaceae), has an extensive history in pines
-
90. Kossack DS, Kinlaw CS. 1999. IFG, a gypsy-like retrotransposon in Pinus (Pinaceae), has an extensive history in pines. Plant Mol Biol 39:417-26
-
(1999)
Plant Mol Biol
, vol.39
, pp. 417-426
-
-
Kossack, D.S.1
Kinlaw, C.S.2
-
92
-
-
0032055154
-
The genomic organisation of non-LTR retrotransposons (LINEs) from three Beta species and five other angiosperms
-
91. Kubis SE, Heslop-Harrison JS, Desel C, Schmidt T. 1998. The genomic organisation of non-LTR retrotransposons (LINEs) from three Beta species and five other angiosperms. Plant Mol. Biol. 36:821-31
-
(1998)
Plant Mol. Biol.
, vol.36
, pp. 821-831
-
-
Kubis, S.E.1
Heslop-Harrison, J.S.2
Desel, C.3
Schmidt, T.4
-
93
-
-
0032096363
-
Characterisation and physical localisation of Ty1-copia-like retrotransposons in four Alstroemeria species
-
92. Kuipers AGJ, Heslop-Harrison JS, Jacobsen E. 1998. Characterisation and physical localisation of Ty1-copia-like retrotransposons in four Alstroemeria species. Genome 41:357-67
-
(1998)
Genome
, vol.41
, pp. 357-367
-
-
Kuipers, A.G.J.1
Heslop-Harrison, J.S.2
Jacobsen, E.3
-
94
-
-
0029670608
-
The adventures of the Ty1-copia group of retrotransposons in plants
-
93. Kumar A. 1996. The adventures of the Ty1 -copia group of retrotransposons in plants. Trends Genet. 12:41-43
-
(1996)
Trends Genet.
, vol.12
, pp. 41-43
-
-
Kumar, A.1
-
95
-
-
0031658283
-
The evolution of plant retroviruses: Moving to green pasture
-
94. Kumar A. 1998. The evolution of plant retroviruses: moving to green pasture. Trends Plant Sci. 3:371-74
-
(1998)
Trends Plant Sci.
, vol.3
, pp. 371-374
-
-
Kumar, A.1
-
96
-
-
0031453312
-
The Ty1-copia group of retrotransposons in plants: Genomic organisation, evolution, and use as molecular markers
-
95. Kumar A, Pearce SR, McLean K, Harrison G, Heslop-Harrison JS, et al. 1997. The Ty1-copia group of retrotransposons in plants: genomic organisation, evolution, and use as molecular markers. Genetica 100:205-17
-
(1997)
Genetica
, vol.100
, pp. 205-217
-
-
Kumar, A.1
Pearce, S.R.2
McLean, K.3
Harrison, G.4
Heslop-Harrison, J.S.5
-
97
-
-
0032956461
-
Identification and characterisation of novel retrotransposons of the gypsy type in rice
-
96. Kumekawa N, Ohtsubo H, Horiuchi T, Ohtsubo E. 1999. Identification and characterisation of novel retrotransposons of the gypsy type in rice. Mol. Gen. Genet. 260: 593-602
-
(1999)
Mol. Gen. Genet.
, vol.260
, pp. 593-602
-
-
Kumekawa, N.1
Ohtsubo, H.2
Horiuchi, T.3
Ohtsubo, E.4
-
99
-
-
0029134032
-
RNA polymerase III dependence of the human L1 promoter and possible participation of the RNA polymerase II factor YY1 in the RNA polymerase III transcription system
-
98. Kurose K, Hata K, Hattori M, Sakaki Y. 1995. RNA polymerase III dependence of the human L1 promoter and possible participation of the RNA polymerase II factor YY1 in the RNA polymerase III transcription system. Nucleic Acids Res. 23:3704-9
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 3704-3709
-
-
Kurose, K.1
Hata, K.2
Hattori, M.3
Sakaki, Y.4
-
100
-
-
0031467680
-
Transposable element-host interactions: Regulation of insertion and excision
-
99. Labrador M, Corces VG. 1997. Transposable element-host interactions: regulation of insertion and excision. Annu. Rev. Genet. 31:381-404
-
(1997)
Annu. Rev. Genet.
, vol.31
, pp. 381-404
-
-
Labrador, M.1
Corces, V.G.2
-
101
-
-
0032499714
-
SIRE-1, a copia/Ty1-like retroelement from soybean, encodes a retroviral envelope-like protein
-
100. Laten HM, Majumdar A, Gaucher EA. 1998. SIRE-1, a copia/Ty1-like retroelement from soybean, encodes a retroviral envelope-like protein. Proc. Natl. Acad. Sci. USA 95:6897-902
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 6897-6902
-
-
Laten, H.M.1
Majumdar, A.2
Gaucher, E.A.3
-
102
-
-
0027500625
-
An abundant LINE-like element amplified in the genome of Lilium speciosum
-
101. Leeton PR, Smyth DR. 1993. An abundant LINE-like element amplified in the genome of Lilium speciosum. Mol. Gen. Genet. 237:97-104
-
(1993)
Mol. Gen. Genet.
, vol.237
, pp. 97-104
-
-
Leeton, P.R.1
Smyth, D.R.2
-
104
-
-
0030856565
-
Evolution of SINE S1 retroposons in Cruciferae plant species
-
103. Lenoir A, Cournoyer B, Warwick S, Picard G, Deragon JM. 1994. Evolution of SINE S1 retroposons in Cruciferae plant species. Mol. Biol. Evol. 14:934-41
-
(1994)
Mol. Biol. Evol.
, vol.14
, pp. 934-941
-
-
Lenoir, A.1
Cournoyer, B.2
Warwick, S.3
Picard, G.4
Deragon, J.M.5
-
105
-
-
0028410524
-
Gross chromosome rearrangements mediated by transposable elements in Drosophila melanogaster
-
104. Lim JK, Simmons JM. 1994. Gross chromosome rearrangements mediated by transposable elements in Drosophila melanogaster. BioEssays 16:269-73
-
(1994)
BioEssays
, vol.16
, pp. 269-273
-
-
Lim, J.K.1
Simmons, J.M.2
-
106
-
-
0032126220
-
Amplicons of maize zein genes are conserved within genic but expanded and constricted in intergenic regions
-
105. Llaca V, Messing J. 1998. Amplicons of maize zein genes are conserved within genic but expanded and constricted in intergenic regions. Plant J. 15:211-20
-
(1998)
Plant J.
, vol.15
, pp. 211-220
-
-
Llaca, V.1
Messing, J.2
-
107
-
-
0031754848
-
Structural analysis of a hmg-coA reductase pseudogene: Insights into evolutionary processes affecting the hmgr gene family in allotetraploid cotton (Gossypium hirsutum L)
-
106. Loguercio LL, Wilkins TA. 1998. Structural analysis of a hmg-coA reductase pseudogene: insights into evolutionary processes affecting the hmgr gene family in allotetraploid cotton (Gossypium hirsutum L). Curr. Genet. 34:241-49
-
(1998)
Curr. Genet.
, vol.34
, pp. 241-249
-
-
Loguercio, L.L.1
Wilkins, T.A.2
-
108
-
-
0027450385
-
Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: A mechanism for non-LTRretrotransposition
-
107. Luan DD, Korman MH, Jakubczak JL, Eickbush TH. 1993. Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTRretrotransposition. Cell 72:595-605
-
(1993)
Cell
, vol.72
, pp. 595-605
-
-
Luan, D.D.1
Korman, M.H.2
Jakubczak, J.L.3
Eickbush, T.H.4
-
109
-
-
0029001089
-
RNA-mediated transposition of the tobacco retrotransposon Tnt1 in Arabidopsis thaliana
-
108. Lucas H, Feuerbach F, Kunert K, Grandbastien M-A, Caboche M. 1995. RNA-mediated transposition of the tobacco retrotransposon Tnt1 in Arabidopsis thaliana. EMBO J. 14:2364-73
-
(1995)
EMBO J.
, vol.14
, pp. 2364-2373
-
-
Lucas, H.1
Feuerbach, F.2
Kunert, K.3
Grandbastien, M.-A.4
Caboche, M.5
-
110
-
-
0029160870
-
Complete sequence of the maize chloroplast genome, gene content, hotspots of divergence and fine tuning of genetic information by transcript editing
-
109. Maier RM, Neckermann K, Igloi GL, Kossel H. 1995. Complete sequence of the maize chloroplast genome, gene content, hotspots of divergence and fine tuning of genetic information by transcript editing. J. Mol. Evol. 25:614-28
-
(1995)
J. Mol. Evol.
, vol.25
, pp. 614-628
-
-
Maier, R.M.1
Neckermann, K.2
Igloi, G.L.3
Kossel, H.4
-
111
-
-
0031154028
-
Retrotransposon insertion into the maize waxy gene results in tissue-specific RNA processing
-
110. Marillonnet S, Wessler SR. 1997. Retrotransposon insertion into the maize waxy gene results in tissue-specific RNA processing. Plant Cell 9:967-78
-
(1997)
Plant Cell
, vol.9
, pp. 967-978
-
-
Marillonnet, S.1
Wessler, S.R.2
-
112
-
-
0031793897
-
Extreme structural heterogeneity among the members of amaize retrotransposon family
-
111. Marillonnet S, Wessler SR. 1998. Extreme structural heterogeneity among the members of amaize retrotransposon family. Genetics 150:1245-56
-
(1998)
Genetics
, vol.150
, pp. 1245-1256
-
-
Marillonnet, S.1
Wessler, S.R.2
-
113
-
-
0030198502
-
Epigenetic phenomena: Paramutation and gene silencing in plants
-
112. Martienssen RA. 1996. Epigenetic phenomena: paramutation and gene silencing in plants. Curr. Biol. 6:810-13
-
(1996)
Curr. Biol.
, vol.6
, pp. 810-813
-
-
Martienssen, R.A.1
-
115
-
-
0033026625
-
Evolutionary dynamics of Ty1-copia group retrotransposons in grass shown by reverse transcriptase domain analysis
-
114. Matsuoka Y, Tsunewaki K. 1999. Evolutionary dynamics of Ty1-copia group retrotransposons in grass shown by reverse transcriptase domain analysis. Mol. Biol. Evol. 16:208-17
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 208-217
-
-
Matsuoka, Y.1
Tsunewaki, K.2
-
116
-
-
0032035334
-
Position effects and epigenetic silencing of plant transgenes
-
115. Matzke AJM, Matzke MA. 1998. Position effects and epigenetic silencing of plant transgenes. Curr. Opin. Plant Biol. 1:142-8
-
(1998)
Curr. Opin. Plant Biol.
, vol.1
, pp. 142-148
-
-
Matzke, A.J.M.1
Matzke, M.A.2
-
117
-
-
0021715393
-
The significance of responses of the genome to challenge
-
116. McClintock B. 1984. The significance of responses of the genome to challenge. Science 226:792-801
-
(1984)
Science
, vol.226
, pp. 792-801
-
-
McClintock, B.1
-
118
-
-
0031441380
-
LTR retrotransposons and evolution of eukaryotic enhancers
-
117. McDonald JF, Matyunina LV, Wilson S, Jordan IK, Brown NJ, Miller WJ. 1997. LTR retrotransposons and evolution of eukaryotic enhancers. Genetica 100:3-13
-
(1997)
Genetica
, vol.100
, pp. 3-13
-
-
McDonald, J.F.1
Matyunina, L.V.2
Wilson, S.3
Jordan, I.K.4
Brown, N.J.5
Miller, W.J.6
-
119
-
-
0032206007
-
The major resistance gene cluster in lettuce is highly duplicated and spans several megabases
-
118. Meyers BC, Chin DB, Shen KA, Sivaramakrishnan S, Lavelle DO, et al. 1998. The major resistance gene cluster in lettuce is highly duplicated and spans several megabases. Plant Cell 10:1817-32
-
(1998)
Plant Cell
, vol.10
, pp. 1817-1832
-
-
Meyers, B.C.1
Chin, D.B.2
Shen, K.A.3
Sivaramakrishnan, S.4
Lavelle, D.O.5
-
120
-
-
0032968775
-
Activation of the promoter of the Tnt1 retrotransposon in tomato after inoculation with the fungal pathogen Cladosporium fulvum
-
119. Mhiri C, De Wit PJGM, Grandbastien M-A. 1999. Activation of the promoter of the Tnt1 retrotransposon in tomato after inoculation with the fungal pathogen Cladosporium fulvum. Mol. Plant-Microbe Interact. 12:592-603
-
(1999)
Mol. Plant-Microbe Interact.
, vol.12
, pp. 592-603
-
-
Mhiri, C.1
De Wit, P.J.G.M.2
Grandbastien, M.-A.3
-
121
-
-
0030939422
-
The promoter of the tobacco Tnt1 retrotransposon is induced by wounding and by abiotic stress
-
120. Mhiri C, Morel JB, Vernhettes S, Casacuberta JM, Lucas H, Grandbastien MA. 1997. The promoter of the tobacco Tnt1 retrotransposon is induced by wounding and by abiotic stress. Plant Mol. Biol. 33: 257-66
-
(1997)
Plant Mol. Biol.
, vol.33
, pp. 257-266
-
-
Mhiri, C.1
Morel, J.B.2
Vernhettes, S.3
Casacuberta, J.M.4
Lucas, H.5
Grandbastien, M.A.6
-
122
-
-
0031732044
-
Retrotransposon-related DNA sequences in the centromeres of grass chromosomes
-
121. Miller JT, Dong F, Jackson SA, Song J, Jiang J. 1998. Retrotransposon-related DNA sequences in the centromeres of grass chromosomes. Genetics 150:1615-23
-
(1998)
Genetics
, vol.150
, pp. 1615-1623
-
-
Miller, J.T.1
Dong, F.2
Jackson, S.A.3
Song, J.4
Jiang, J.5
-
123
-
-
0029334974
-
Grasses, line up and form a circle
-
122. Moore G, Devos KM, Wang Z, Gale MD. 1995. Grasses, line up and form a circle. Curr. Biol. 5:737-39
-
(1995)
Curr. Biol.
, vol.5
, pp. 737-739
-
-
Moore, G.1
Devos, K.M.2
Wang, Z.3
Gale, M.D.4
-
124
-
-
0029970701
-
Capture of retrotransposon DNA at the sites of chromosomal double-strand DNA breaks
-
123. Moore JK, Haber JE. 1996. Capture of retrotransposon DNA at the sites of chromosomal double-strand DNA breaks. Nature 383:644-45
-
(1996)
Nature
, vol.383
, pp. 644-645
-
-
Moore, J.K.1
Haber, J.E.2
-
125
-
-
0026076470
-
A family of retrotransposons and associated genomic variation in wheat
-
124. Moore G, Lucas H, Batty N, Flavell R. 1991. A family of retrotransposons and associated genomic variation in wheat. Genomics 10:461-68
-
(1991)
Genomics
, vol.10
, pp. 461-468
-
-
Moore, G.1
Lucas, H.2
Batty, N.3
Flavell, R.4
-
126
-
-
0030060551
-
Regulation of expression of the tobacco Tnt1 retrotransposon in heterologous species following pathogen-related stresses
-
125. Moreau-Mhiri C, Morel JB, Audeon C, Ferault M, Grandbastien MA, Lucas H. 1996. Regulation of expression of the tobacco Tnt1 retrotransposon in heterologous species following pathogen-related stresses. Plant J. 9:409-19
-
(1996)
Plant J.
, vol.9
, pp. 409-419
-
-
Moreau-Mhiri, C.1
Morel, J.B.2
Audeon, C.3
Ferault, M.4
Grandbastien, M.A.5
Lucas, H.6
-
128
-
-
0021879662
-
Complete nucleotide sequence of the Drosophila transposable element copia: Homology between copia and retroviral proteins
-
127. Mount SM, Rubin GM. 1985. Complete nucleotide sequence of the Drosophila transposable element copia: homology between copia and retroviral proteins. Mol Cell Biol 5:1630-38
-
(1985)
Mol Cell Biol
, vol.5
, pp. 1630-1638
-
-
Mount, S.M.1
Rubin, G.M.2
-
129
-
-
0030771475
-
RIRE1, a retrotransposon from wild rice (Oryza australiensis)
-
128. Noma K, Nakajinia R, Ohtsubo H, Ohtsubo E. 1997. RIRE1, a retrotransposon from wild rice (Oryza australiensis). Genes Genet. Syst. 72:131-40
-
(1997)
Genes Genet. Syst.
, vol.72
, pp. 131-140
-
-
Noma, K.1
Nakajinia, R.2
Ohtsubo, H.3
Ohtsubo, E.4
-
130
-
-
0032982180
-
Non-LTR retrotransposon LINEs are ubiquitous components of plant genomes
-
129. Noma K, Ohtsubo E, Ohtsubo H. 1999. Non-LTR retrotransposon LINEs are ubiquitous components of plant genomes. Mol. Gen. Genet. 261:71-79
-
(1999)
Mol. Gen. Genet.
, vol.261
, pp. 71-79
-
-
Noma, K.1
Ohtsubo, E.2
Ohtsubo, H.3
-
131
-
-
0032169318
-
Molecular anatomy of a small chromosome in the green alga Chlorella vulgaris
-
130. Noutoshi Y, Ito Y, Kanetani S, Fuji M, Usami S, Yamada T. 1998. Molecular anatomy of a small chromosome in the green alga Chlorella vulgaris. Nucleic Acids Res. 26:3900-7
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 3900-3907
-
-
Noutoshi, Y.1
Ito, Y.2
Kanetani, S.3
Fuji, M.4
Usami, S.5
Yamada, T.6
-
132
-
-
0039415336
-
A full length Ty3/gypsy-type retrotransposon in the fern Adiantum
-
131. Nozue K, Kanegae T, Wada M. 1997. A full length Ty3/gypsy-type retrotransposon in the fern Adiantum. J. Plant Res. 110:495-99
-
(1997)
J. Plant Res.
, vol.110
, pp. 495-499
-
-
Nozue, K.1
Kanegae, T.2
Wada, M.3
-
133
-
-
0009673698
-
Undermethylation associated with retroelements activation and chromosomes remodelling in an interspecific mammalian hybrid
-
132. O'Neill RJW, O'Neill MJ, Graves MA. 1998. Undermethylation associated with retroelements activation and chromosomes remodelling in an interspecific mammalian hybrid. Nature 393:68-72
-
(1998)
Nature
, vol.393
, pp. 68-72
-
-
O'Neill, R.J.W.1
O'Neill, M.J.2
Graves, M.A.3
-
134
-
-
0031593205
-
SINEs and LINEs share common 3′ sequences: A review
-
133. Okada N, Hamada M, Ogiwara I, Ohshima K. 1997. SINEs and LINEs share common 3′ sequences: a review. Gene 205:229-43
-
(1997)
Gene
, vol.205
, pp. 229-243
-
-
Okada, N.1
Hamada, M.2
Ogiwara, I.3
Ohshima, K.4
-
135
-
-
0018857680
-
Selfish DNA: The ultimate parasite
-
134. Orgel LE, Crick FHC.1980. Selfish DNA: the ultimate parasite. Nature 284:604-7
-
(1980)
Nature
, vol.284
, pp. 604-607
-
-
Orgel, L.E.1
Crick, F.H.C.2
-
136
-
-
0030835456
-
Cosuppression in Drosophila: Gene silencing of alcohol dehydrogenase by white-adh transgenes ispolycomb dependent
-
135. Pal-Bhadra M, Bhadra U, Birchler JA. 1997. Cosuppression in Drosophila: gene silencing of alcohol dehydrogenase by white-adh transgenes ispolycomb dependent. Cell 90:479-90
-
(1997)
Cell
, vol.90
, pp. 479-490
-
-
Pal-Bhadra, M.1
Bhadra, U.2
Birchler, J.A.3
-
137
-
-
2642665514
-
A contiguous 60 kb genomic stretch from barley reveals molecular evidence for gene islands in a monocot genome
-
136. Panstruga R, Buschges R, Piffanelli P, Schulze-Lefert P. 1998. A contiguous 60 kb genomic stretch from barley reveals molecular evidence for gene islands in a monocot genome. Nucleic Acids Res. 26:1056-62
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 1056-1062
-
-
Panstruga, R.1
Buschges, R.2
Piffanelli, P.3
Schulze-Lefert, P.4
-
139
-
-
0031277688
-
A functional S locus anther gene is not required for the self-incompatibility response in Brassica oleracea
-
138. Pastugilia M, Ruffio-Chable V, Delorme V, Gaude T, Dumas C, Cock JM. 1997. A functional S locus anther gene is not required for the self-incompatibility response in Brassica oleracea. Plant Cell 9:2065-76
-
(1997)
Plant Cell
, vol.9
, pp. 2065-2076
-
-
Pastugilia, M.1
Ruffio-Chable, V.2
Delorme, V.3
Gaude, T.4
Dumas, C.5
Cock, J.M.6
-
140
-
-
0028518535
-
Expression of the tobacco Tnt1 retrotransposon promoter in heterologous species
-
139. Paul PK, Kunert E, Hunter E, Grandbastien M-A. 1994. Expression of the tobacco Tnt1 retrotransposon promoter in heterologous species. Plant Mol. Biol. 26: 393-402
-
(1994)
Plant Mol. Biol.
, vol.26
, pp. 393-402
-
-
Paul, P.K.1
Kunert, E.2
Hunter, E.3
Grandbastien, M.-A.4
-
141
-
-
0031252093
-
Characterisation and genomic organisation of Ty1-copia group retrotransposons in rye (Secale cereale)
-
140. Pearce SR, Harrison G, Heslop-Harrison JS, Flavell AJ, Kumar A. 1997. Characterisation and genomic organisation of Ty1-copia group retrotransposons in rye (Secale cereale). Genome 40:617-25
-
(1997)
Genome
, vol.40
, pp. 617-625
-
-
Pearce, S.R.1
Harrison, G.2
Heslop-Harrison, J.S.3
Flavell, A.J.4
Kumar, A.5
-
142
-
-
0029986858
-
The Ty1-copia group retrotransposons in Vicia species: Copy number, sequence heterogeneity and chromosomal localisation
-
141. Pearce SR, Harrison G, Li D, Heslop-Harrison JS, Kumar A, Flavell AJ. 1996. The Ty1-copia group retrotransposons in Vicia species: copy number, sequence heterogeneity and chromosomal localisation. Mol Gen. Genet. 250:305-15
-
(1996)
Mol Gen. Genet.
, vol.250
, pp. 305-315
-
-
Pearce, S.R.1
Harrison, G.2
Li, D.3
Heslop-Harrison, J.S.4
Kumar, A.5
Flavell, A.J.6
-
143
-
-
0029742464
-
The Ty1-copia group retrotransposons of Allium cepa are distributed throughout the chromosomes but are enriched in the terminal heterochromatin
-
142. Pearce SR, Pich U, Harrison G, Flavell AJ, Heslop-Harrison JS, et al. 1996. The Ty1-copia group retrotransposons of Allium cepa are distributed throughout the chromosomes but are enriched in the terminal heterochromatin. Chromosome Res. 4:357-64
-
(1996)
Chromosome Res.
, vol.4
, pp. 357-364
-
-
Pearce, S.R.1
Pich, U.2
Harrison, G.3
Flavell, A.J.4
Heslop-Harrison, J.S.5
-
144
-
-
0033197649
-
Rapid isolation of plant Ty1-copia group retrotransposon LTR sequences for molecular marker studies
-
143. Pearce SR, Stuart-Rogers CM, Kumar A, Ellis THN, Flavell AJ. 1999. Rapid isolation of plant Ty1-copia group retrotransposon LTR sequences for molecular marker studies. Plant J. 19:711-17
-
(1999)
Plant J.
, vol.19
, pp. 711-717
-
-
Pearce, S.R.1
Stuart-Rogers, C.M.2
Kumar, A.3
Ellis, T.H.N.4
Flavell, A.J.5
-
145
-
-
0030111477
-
DNA regions flanking the major Arabidopsis thaliana satellite are principally enriched in Athila retroelement sequences
-
144. Pelissier T, Tutois S, Tourmente S, Deragon JM, Picard G. 1996. DNA regions flanking the major Arabidopsis thaliana satellite are principally enriched in Athila retroelement sequences. Genetica 97:141-51
-
(1996)
Genetica
, vol.97
, pp. 141-151
-
-
Pelissier, T.1
Tutois, S.2
Tourmente, S.3
Deragon, J.M.4
Picard, G.5
-
146
-
-
0000847389
-
Slow but steady: Reduction of genome size through biased mutation
-
145. Petrov D. 1977. Slow but steady: Reduction of genome size through biased mutation. Plant Cell 11:1900-1
-
(1977)
Plant Cell
, vol.11
, pp. 1900-1901
-
-
Petrov, D.1
-
147
-
-
0029002509
-
Transposable elements are stable components of Drosophila melanogaster heterochromatin
-
146. Pimpinelli S, Berloco M, Fanti L, Demitri P, Bonaccorsi E, et al. 1995. Transposable elements are stable components of Drosophila melanogaster heterochromatin. Proc. Natl. Acad. Sci. USA 92:3804-8
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 3804-3808
-
-
Pimpinelli, S.1
Berloco, M.2
Fanti, L.3
Demitri, P.4
Bonaccorsi, E.5
-
148
-
-
0028038451
-
Microbial elicitors of plant defense response activate transcription of a retrotransposon
-
147. Pouteau S, Grandbastien MA, Boccara M. 1994. Microbial elicitors of plant defense response activate transcription of a retrotransposon. Plant J. 5:535-42
-
(1994)
Plant J.
, vol.5
, pp. 535-542
-
-
Pouteau, S.1
Grandbastien, M.A.2
Boccara, M.3
-
149
-
-
0025847497
-
Specific expression of the tobacco Tnt1 retrotransposon in protoplasts
-
148. Pouteau S, Huttner E, Grandbastien MA, Caboche M. 1991. Specific expression of the tobacco Tnt1 retrotransposon in protoplasts. EMBO J. 10:1911-18
-
(1991)
EMBO J.
, vol.10
, pp. 1911-1918
-
-
Pouteau, S.1
Huttner, E.2
Grandbastien, M.A.3
Caboche, M.4
-
150
-
-
0032479378
-
Identification of a short interspersed repetitive element in partially spliced transcripts of the bell pepper (Capsicum annuum) PAP gene: New evolutionary and regulatory aspects on plant tRNA-related SINEs
-
149. Pozueta-Romero J, Houlne G, Schantz R. 1998. Identification of a short interspersed repetitive element in partially spliced transcripts of the bell pepper (Capsicum annuum) PAP gene: new evolutionary and regulatory aspects on plant tRNA-related SINEs. Gene 214:51-58
-
(1998)
Gene
, vol.214
, pp. 51-58
-
-
Pozueta-Romero, J.1
Houlne, G.2
Schantz, R.3
-
151
-
-
0032419941
-
A TY3/GYPSY retrotransposon-like sequence localises to the centromeric regions of cereal chromosomes
-
150. Presting GG, Malysheva L, Fuchs J, Schubert I. 1998. A TY3/GYPSY retrotransposon-like sequence localises to the centromeric regions of cereal chromosomes. Plant J. 16:721-28
-
(1998)
Plant J.
, vol.16
, pp. 721-728
-
-
Presting, G.G.1
Malysheva, L.2
Fuchs, J.3
Schubert, I.4
-
152
-
-
0028172055
-
Molecular evolution of Magellan, a maize Ty3/gypsy-like retrotransposon
-
151. Purugganan MD, Wessler SR. 1994. Molecular evolution of Magellan, a maize Ty3/gypsy-like retrotransposon. Proc. Natl. Acad. Sci. USA 91:11674-78
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 11674-11678
-
-
Purugganan, M.D.1
Wessler, S.R.2
-
153
-
-
0029278746
-
Transposon signatures-species-specific molecular markers that utilise a class of multiple-copy nuclear-DNA
-
152. Purugganan MD, Wessler SR. 1995. Transposon signatures-species-specific molecular markers that utilise a class of multiple-copy nuclear-DNA. Mol. Ecol. 4:265-69
-
(1995)
Mol. Ecol.
, vol.4
, pp. 265-269
-
-
Purugganan, M.D.1
Wessler, S.R.2
-
154
-
-
0033084050
-
Intimate association of microsatellite repeats with retrotransposons and other dispersed repetitive elements in barley
-
153. Ramsay L, Macaulay M, Cardie L, Morgante M,Degli-Ivanissevich S,etal. 1999. Intimate association of microsatellite repeats with retrotransposons and other dispersed repetitive elements in barley. Plant J. 17:415-23
-
(1999)
Plant J.
, vol.17
, pp. 415-423
-
-
Ramsay, L.1
Macaulay, M.2
Cardie, L.3
Morgante, M.4
Degli-Ivanissevich, S.5
-
155
-
-
0032168678
-
CpG methylation, chromatin structure and gene silencing - A three way connection
-
154. Razin A. 1998. CpG methylation, chromatin structure and gene silencing - a three way connection. EMBO J. 17:4905-8
-
(1998)
EMBO J.
, vol.17
, pp. 4905-4908
-
-
Razin, A.1
-
156
-
-
0030052139
-
A retrotransposon-like sequence linked to the S-locus of Nicotiana alata is expressed in styles in response to touch
-
155. Royo J, Nass N, Matton DP, Okamoto S, Clarke AE, Newbigin E. 1996. A retrotransposon-like sequence linked to the S-locus of Nicotiana alata is expressed in styles in response to touch. Mol. Gen. Genet. 250:180-88
-
(1996)
Mol. Gen. Genet.
, vol.250
, pp. 180-188
-
-
Royo, J.1
Nass, N.2
Matton, D.P.3
Okamoto, S.4
Clarke, A.E.5
Newbigin, E.6
-
157
-
-
0032413101
-
Evidence that a recent increase in maize genome size was caused by the massive amplification of intergene retrotransposons
-
156. SanMiguel P, Bennetzen JL. 1998. Evidence that a recent increase in maize genome size was caused by the massive amplification of intergene retrotransposons. Ann. Bot. 81:37-44
-
(1998)
Ann. Bot.
, vol.81
, pp. 37-44
-
-
SanMiguel, P.1
Bennetzen, J.L.2
-
158
-
-
0031707062
-
The palaeontology of intergene retrotransposons of maize
-
157. SanMiguel P, Gaut BS, Tikhonov A, Nakajima Y, Bennetzen JL. 1998. The palaeontology of intergene retrotransposons of maize. Nat. Genet. 20:43-45
-
(1998)
Nat. Genet.
, vol.20
, pp. 43-45
-
-
SanMiguel, P.1
Gaut, B.S.2
Tikhonov, A.3
Nakajima, Y.4
Bennetzen, J.L.5
-
159
-
-
0013630297
-
Nested retrotransposons in the intergenic regions of the maize genome
-
158. SanMiguel P, Tikhonov A, Jin YK, Motchoulskaia N, Zakharov D, et al. 1996. Nested retrotransposons in the intergenic regions of the maize genome. Science 274:765-68
-
(1996)
Science
, vol.274
, pp. 765-768
-
-
SanMiguel, P.1
Tikhonov, A.2
Jin, Y.K.3
Motchoulskaia, N.4
Zakharov, D.5
-
160
-
-
0033558369
-
Loss-of-function mutations in the rice homeobox gene OSH15 affect the architecture of internodes resulting in dwarf plants
-
159. Sato Y, Sentoku N, Miura Y, Hirochika H, Kitano H, Matsuoka M. 1999. Loss-of-function mutations in the rice homeobox gene OSH15 affect the architecture of internodes resulting in dwarf plants. EMBO J. 18:992-1002
-
(1999)
EMBO J.
, vol.18
, pp. 992-1002
-
-
Sato, Y.1
Sentoku, N.2
Miura, Y.3
Hirochika, H.4
Kitano, H.5
Matsuoka, M.6
-
161
-
-
0032531815
-
Does SINE evolution preclude Alu function?
-
160. Schmid CW. 1998. Does SINE evolution preclude Alu function? Nucleic Acids Res. 26:4541-50
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 4541-4550
-
-
Schmid, C.W.1
-
162
-
-
0029058136
-
Analysis and chromosomal localisation of retrotransposons in sugar beet (Beta vulgaris) LINES and Ty1-copia-like elements as major components of the genome
-
161. Schmidt T, Kubis S, Heslop-Harrison JS. 1995. Analysis and chromosomal localisation of retrotransposons in sugar beet (Beta vulgaris) LINES and Ty1-copia-like elements as major components of the genome. Chromosome Res. 3:335-45
-
(1995)
Chromosome Res.
, vol.3
, pp. 335-345
-
-
Schmidt, T.1
Kubis, S.2
Heslop-Harrison, J.S.3
-
163
-
-
4243327288
-
Plastid, nuclear and reverse transcriptase sequences in the mitochondrial genome of Oenothera: Is genetic information transferred between organelles via RNA?
-
162. Schuster W, Brennicke A. 1987. Plastid, nuclear and reverse transcriptase sequences in the mitochondrial genome of Oenothera: is genetic information transferred between organelles via RNA? EMBO J. 45:61-78
-
(1987)
EMBO J.
, vol.45
, pp. 61-78
-
-
Schuster, W.1
Brennicke, A.2
-
164
-
-
0000554795
-
Cin4, an insert altering the structure of the A1 gene of Zea mays, exhibits properties of nonviral retrotransposons
-
163. Schwarz-Sommer Z, Leclercq L, Göbel E, Saedler H. 1987. Cin4, an insert altering the structure of the A1 gene of Zea mays, exhibits properties of nonviral retrotransposons. EMBO J. 6:3873-80
-
(1987)
EMBO J.
, vol.6
, pp. 3873-3880
-
-
Schwarz-Sommer, Z.1
Leclercq, L.2
Göbel, E.3
Saedler, H.4
-
165
-
-
0024570452
-
An element with long terminal repeats and its variant arrangements in the genome of Lilium henryi
-
164. Sentry JW, Smyth DR. 1989. An element with long terminal repeats and its variant arrangements in the genome of Lilium henryi. Mol. Gen. Genet. 215:349-54
-
(1989)
Mol. Gen. Genet.
, vol.215
, pp. 349-354
-
-
Sentry, J.W.1
Smyth, D.R.2
-
166
-
-
0021269379
-
Similarity of the Cin1 repetitive family of Zea mays to eukaryotic transposable elements
-
165. Shepherd NS, Schwarz-Sommer Z, Blumberg vel Spalve J, Gupta M, Wienand U, Saedler H. 1984. Similarity of the Cin1 repetitive family of Zea mays to eukaryotic transposable elements. Nature 307:185-87
-
(1984)
Nature
, vol.307
, pp. 185-187
-
-
Shepherd, N.S.1
Schwarz-Sommer, Z.2
Blumberg Vel Spalve, J.3
Gupta, M.4
Wienand, U.5
Saedler, H.6
-
167
-
-
0008883010
-
Nonmethylated transposable elements and methylated genes in chordate genome
-
166. Simmen MW, Leitgeb S, Charlton J, Jones SJ, Harris BR, et al. 1999. Nonmethylated transposable elements and methylated genes in chordate genome. Science 11:64-67
-
(1999)
Science
, vol.11
, pp. 64-67
-
-
Simmen, M.W.1
Leitgeb, S.2
Charlton, J.3
Jones, S.J.4
Harris, B.R.5
-
168
-
-
0030479536
-
The origin of interspersed repeats in the human genome
-
167. Smit AFA. 1996. The origin of interspersed repeats in the human genome. Curr. Opin. Genet. Dev. 6:743-48
-
(1996)
Curr. Opin. Genet. Dev.
, vol.6
, pp. 743-748
-
-
Smit, A.F.A.1
-
169
-
-
0024706325
-
Plant retrotransposon from Lilium henryi is related to Ty3 of yeast and the gypsy group of Drosophila
-
168. Smyth DR, Kalitsis P, Joseph JL, Sentry JW. 1989. Plant retrotransposon from Lilium henryi is related to Ty3 of yeast and the gypsy group of Drosophila. Proc. Natl. Acad. Sci. USA 86:5015-19
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 5015-5019
-
-
Smyth, D.R.1
Kalitsis, P.2
Joseph, J.L.3
Sentry, J.W.4
-
170
-
-
0003144354
-
Plant retrotransposons
-
ed. DPS Verma, London: CRC Press
-
169. Smyth DR. 1993. Plant retrotransposons. In Control of Gene Expression, ed. DPS Verma, pp. 1-15. London: CRC Press
-
(1993)
Control of Gene Expression
, pp. 1-15
-
-
Smyth, D.R.1
-
171
-
-
0027992609
-
An Env-like protein encoded by Drosophila retroelement: Evidence that gypsy is an infectious retrovirus
-
170. Song SU, Gerasirnova T, Kurkulos M, Boeke JD, Corces VG. 1994. An Env-like protein encoded by Drosophila retroelement: evidence that gypsy is an infectious retrovirus. Genes Dev. 8:2026-57
-
(1994)
Genes Dev.
, vol.8
, pp. 2026-2057
-
-
Song, S.U.1
Gerasirnova, T.2
Kurkulos, M.3
Boeke, J.D.4
Corces, V.G.5
-
172
-
-
0031200915
-
Evolution of the rice Xa21 disease resistance gene family
-
171. Song W-Y, Pi L-Y, Wang G-L, Gardner J, Holsten T, Ronald PC. 1997. Evolution of the rice Xa21 disease resistance gene family. Plant Cell 9:1279-87
-
(1997)
Plant Cell
, vol.9
, pp. 1279-1287
-
-
Song, W.-Y.1
Pi, L.-Y.2
Wang, G.-L.3
Gardner, J.4
Holsten, T.5
Ronald, P.C.6
-
173
-
-
0030106262
-
Retrotransposon BARE-1 is a major, dispersed component of the barley (Hordeum vulgare L.) genome
-
172. Suoniemi A, Anamthawat-Jonsson K, ArnaT, Schulman AH. 1996. Retrotransposon BARE-1 is a major, dispersed component of the barley (Hordeum vulgare L.) genome. Plant Mol. Biol. 30:1321-29
-
(1996)
Plant Mol. Biol.
, vol.30
, pp. 1321-1329
-
-
Suoniemi, A.1
Anamthawat-Jonsson, K.2
Arna, T.3
Schulman, A.H.4
-
174
-
-
0030152180
-
The BARE-1 retrotransposon is transcribed in barley from an LTR promoter active in transient assays
-
173. Suoniemi A, Narvanto A, Schulman AH. 1996. The BARE-1 retrotransposon is transcribed in barley from an LTR promoter active in transient assays. Plant Mol. Biol. 31:295-306
-
(1996)
Plant Mol. Biol.
, vol.31
, pp. 295-306
-
-
Suoniemi, A.1
Narvanto, A.2
Schulman, A.H.3
-
175
-
-
0031438187
-
BARE-1 insertion site preferences and evolutionary conservation of RNA and cDNA processing sites
-
174. Suoneimi A, Schmidt D, Schulman AH. 1997. BARE-1 insertion site preferences and evolutionary conservation of RNA and cDNA processing sites. Genetica 100:219-30
-
(1997)
Genetica
, vol.100
, pp. 219-230
-
-
Suoneimi, A.1
Schmidt, D.2
Schulman, A.H.3
-
176
-
-
0031874963
-
The core domain of retrotransposon integrase in Hordeum: Predicted structure and evolution
-
175. Suoniemi A, Tanskanen J, Pentikainen O, Johnson MS, Schulman AH. 1998. The core domain of retrotransposon integrase in Hordeum: predicted structure and evolution. Mol. Biol. Evol. 15:1135-44
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 1135-1144
-
-
Suoniemi, A.1
Tanskanen, J.2
Pentikainen, O.3
Johnson, M.S.4
Schulman, A.H.5
-
177
-
-
0032033103
-
Gypsy-like retrotransposons are widespread in the plant kingdom
-
176. Suoniemi A, Tanskanen J, Schulman AH. 1998. Gypsy-like retrotransposons are widespread in the plant kingdom. Plant J. 13:699-705
-
(1998)
Plant J.
, vol.13
, pp. 699-705
-
-
Suoniemi, A.1
Tanskanen, J.2
Schulman, A.H.3
-
178
-
-
0032006618
-
Transcriptional activation of the tobacco retrotransposon Tto1 by wounding and methyl jasmonate
-
177. Takeda S, Sugimoto K, Otsuki H, Hirochika H. 1998. Transcriptional activation of the tobacco retrotransposon Tto1 by wounding and methyl jasmonate. Plant Mol. Biol. 36:365-76
-
(1998)
Plant Mol. Biol.
, vol.36
, pp. 365-376
-
-
Takeda, S.1
Sugimoto, K.2
Otsuki, H.3
Hirochika, H.4
-
179
-
-
0033136093
-
13-bp cis-regulatory element in the LTR promoter of tobacco retrotransposon Tto1 is involved in responsiveness to tissue culture, wounding, methyl jasmonate and fungal elicitors
-
178. Takeda S, Sugimoto K, Otsuki H, Hirochika H. 1999. 13-bp cis-regulatory element in the LTR promoter of tobacco retrotransposon Tto1 is involved in responsiveness to tissue culture, wounding, methyl jasmonate and fungal elicitors. Plant J. 18:1-11
-
(1999)
Plant J.
, vol.18
, pp. 1-11
-
-
Takeda, S.1
Sugimoto, K.2
Otsuki, H.3
Hirochika, H.4
-
180
-
-
0031697371
-
Similar target site selection occurs in integration of plant and mammalian retroposons
-
179. Tatout C, Lavie L, Deragon JM. 1998. Similar target site selection occurs in integration of plant and mammalian retroposons. J. Mol. Evol. 47:463-70
-
(1998)
J. Mol. Evol.
, vol.47
, pp. 463-470
-
-
Tatout, C.1
Lavie, L.2
Deragon, J.M.3
-
181
-
-
0018974585
-
Origin of retroviruses from cellular moveable genetic elements
-
180. Temin HM. 1980. Origin of retroviruses from cellular moveable genetic elements. Cell 21:599-600
-
(1980)
Cell
, vol.21
, pp. 599-600
-
-
Temin, H.M.1
-
182
-
-
0032189092
-
Retrotransposon-like sequences integrated into the genome of pineapple, Ananas comosus
-
181. Thomson KG, Thomas JE, Dietzgen RG. 1998. Retrotransposon-like sequences integrated into the genome of pineapple, Ananas comosus. Plant Mol. Biol. 38: 461-65
-
(1998)
Plant Mol. Biol.
, vol.38
, pp. 461-465
-
-
Thomson, K.G.1
Thomas, J.E.2
Dietzgen, R.G.3
-
183
-
-
0033594895
-
Colinearity and its exceptions in orthologous adh regions of maize and sorghum
-
182. Tikhonov AP, SanMiguel PJ, Nakajima Y, Gorenstein ND, Bennetzen JL, Avramova Z. 1999. Colinearity and its exceptions in orthologous adh regions of maize and sorghum. Proc. Natl. Acad. Sci. USA 96: 7409-14
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 7409-7414
-
-
Tikhonov, A.P.1
SanMiguel, P.J.2
Nakajima, Y.3
Gorenstein, N.D.4
Bennetzen, J.L.5
Avramova, Z.6
-
184
-
-
0028925748
-
Tightly regulated, developmentally specific expression of the first open reading frame LINE-1 during mouse embryogenesis
-
183. Trelogan S, Martin SL. 1995. Tightly regulated, developmentally specific expression of the first open reading frame LINE-1 during mouse embryogenesis. Proc. Natl. Acad. Sci. USA 92:1520-24
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 1520-1524
-
-
Trelogan, S.1
Martin, S.L.2
-
185
-
-
0029808394
-
PREM-2, a copia-type retroelement in maize is expressed preferentially in early microspores
-
184. Turcich MP, Bokharririza A, Hamilton DA, He CP, Messier W, et al. 1996. PREM-2, a copia-type retroelement in maize is expressed preferentially in early microspores. Sexual Plant Reprod. 9:65-74
-
(1996)
Sexual Plant Reprod.
, vol.9
, pp. 65-74
-
-
Turcich, M.P.1
Bokharririza, A.2
Hamilton, D.A.3
He, C.P.4
Messier, W.5
-
186
-
-
0031021278
-
The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides
-
185. Unseld M, Marienfeld JR, Brandt P, Brennicke A. 1997. The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides. Nat. Genet. 15:57-61
-
(1997)
Nat. Genet.
, vol.15
, pp. 57-61
-
-
Unseld, M.1
Marienfeld, J.R.2
Brandt, P.3
Brennicke, A.4
-
187
-
-
0027190705
-
Copia-like retrotransposable element evolution in diploid and polyploid cotton (Gossypium L.)
-
186. VanderWiel PL, Voytas DF, Wendel JF. 1993. Copia-like retrotransposable element evolution in diploid and polyploid cotton (Gossypium L.). J. Mol. Evol. 36: 429-47
-
(1993)
J. Mol. Evol.
, vol.36
, pp. 429-447
-
-
VanderWiel, P.L.1
Voytas, D.F.2
Wendel, J.F.3
-
188
-
-
0026885574
-
Alternative splicing induced by insertion of retrotransposons into the maize waxy gene
-
187. Varagona MJ, Purugganan M, Wessler SR. 1992. Alternative splicing induced by insertion of retrotransposons into the maize waxy gene. Plant Cell 4:811-20
-
(1992)
Plant Cell
, vol.4
, pp. 811-820
-
-
Varagona, M.J.1
Purugganan, M.2
Wessler, S.R.3
-
189
-
-
0025475313
-
The nucleotide sequence of a nodule-specific gene Nms-25 of Medicago saliva: Its primary evolution via exon-shuffling and retrotransposon-mediated DNA rearrangements
-
188. Végh Z, Vincze E, Kadirov R, Toth G, Kiss GB. 1990. The nucleotide sequence of a nodule-specific gene Nms-25 of Medicago saliva: its primary evolution via exon-shuffling and retrotransposon-mediated DNA rearrangements. Plant Mol. Biol. 15:295-306
-
(1990)
Plant Mol. Biol.
, vol.15
, pp. 295-306
-
-
Végh, Z.1
Vincze, E.2
Kadirov, R.3
Toth, G.4
Kiss, G.B.5
-
190
-
-
0031282540
-
In vivo characterisation of transcriptional regulatory sequences involved in the defence-associated expression of the tobacco retrotransposon Tnt1
-
189. Vernhettes S, Grandbastien MA, Casacuberta JM. 1997. In vivo characterisation of transcriptional regulatory sequences involved in the defence-associated expression of the tobacco retrotransposon Tnt1. Plant Mol. Biol. 35:673-79
-
(1997)
Plant Mol. Biol.
, vol.35
, pp. 673-679
-
-
Vernhettes, S.1
Grandbastien, M.A.2
Casacuberta, J.M.3
-
191
-
-
0031824280
-
The evolutionary analysis of the Tnt1 retrotransposon in Nicotiana species reveals the high variability of its regulatory sequences
-
190. Vernhettes S, Grandbastien MA, Casacuberta JM. 1998. The evolutionary analysis of the Tnt1 retrotransposon in Nicotiana species reveals the high variability of its regulatory sequences. Mol. Biol. Evol. 15:827-36
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 827-836
-
-
Vernhettes, S.1
Grandbastien, M.A.2
Casacuberta, J.M.3
-
192
-
-
0032718558
-
Retrotransposon BARE-1 and its role in genome evolution in the genus Hordeum
-
191. Vicient CM, Suoniemi A, Anamthawat-Jonsson K, Tanskanen J, et al. 1999. Retrotransposon BARE-1 and its role in genome evolution in the genus Hordeum. Plant Cell. 11:1769-84
-
(1999)
Plant Cell.
, vol.11
, pp. 1769-1784
-
-
Vicient, C.M.1
Suoniemi, A.2
Anamthawat-Jonsson, K.3
Tanskanen, J.4
-
193
-
-
0029278933
-
The brown midrib3 (bm3) mutation in maize occurs in the gene encoding caffeic acid O-methyltransferase
-
192. Vignols F, Rigau J, Torres MA, Capellades M, Puigdomenech P. 1995. The brown midrib3 (bm3) mutation in maize occurs in the gene encoding caffeic acid O-methyltransferase. Plant Cell 7:407-16
-
(1995)
Plant Cell
, vol.7
, pp. 407-416
-
-
Vignols, F.1
Rigau, J.2
Torres, M.A.3
Capellades, M.4
Puigdomenech, P.5
-
194
-
-
0024290711
-
A copia-like transposable element family in Arabidopsis thaliana
-
193. Voytas DF, Ausubel FM. 1988. A copia-like transposable element family in Arabidopsis thaliana. Nature 336:242-44
-
(1988)
Nature
, vol.336
, pp. 242-244
-
-
Voytas, D.F.1
Ausubel, F.M.2
-
195
-
-
0026660056
-
Copia-like retrotransposons are ubiquitous among plants
-
194. Voytas DF, Cummings MP, Konieczny A, Ausubel FM, Rodermel SR. 1992. Copia-like retrotransposons are ubiquitous among plants. Proc. Natl. Acad. Sci. USA 89:7124-28
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 7124-7128
-
-
Voytas, D.F.1
Cummings, M.P.2
Konieczny, A.3
Ausubel, F.M.4
Rodermel, S.R.5
-
196
-
-
0025052373
-
The structure, distribution and evolution of the Ta1 retrotransposable element family of Arabidop sis thaliana
-
195. Voytas DF, Konieczny A, Cummings MP, Ausubel FM. 1990. The structure, distribution and evolution of the Ta1 retrotransposable element family of Arabidop sis thaliana. Genetics 126:713-21
-
(1990)
Genetics
, vol.126
, pp. 713-721
-
-
Voytas, D.F.1
Konieczny, A.2
Cummings, M.P.3
Ausubel, F.M.4
-
197
-
-
0032076461
-
Beyond the nucleosome: Epigenetic aspects of position-effect variegation in Drosophila
-
196. Wakimoto B. 1998. Beyond the nucleosome: epigenetic aspects of position-effect variegation in Drosophila. Cell 93: 321-24
-
(1998)
Cell
, vol.93
, pp. 321-324
-
-
Wakimoto, B.1
-
198
-
-
0032076826
-
Xa21D encodes a receptor-like molecule with a leucinerich repeat domain that determines race-specific recognition and is subject to adaptive evolution
-
197. Wang G-L, Ruan DL, Song W-Y, Sideris S, Chen L, et al. 1998. Xa21D encodes a receptor-like molecule with a leucinerich repeat domain that determines race-specific recognition and is subject to adaptive evolution. Plant Cell 10:765-79
-
(1998)
Plant Cell
, vol.10
, pp. 765-779
-
-
Wang, G.-L.1
Ruan, D.L.2
Song, W.-Y.3
Sideris, S.4
Chen, L.5
-
199
-
-
0031127313
-
Copia-like retrotrans posons in rice: Sequence heterogeneity, species distribution and chromosomal locations
-
198. Wang S, Zhang Q, Maughan PJ, Saghai-Maroof MA. 1997. Copia-like retrotrans posons in rice: Sequence heterogeneity, species distribution and chromosomal locations. Plant Mol. Biol. 33:1051-58
-
(1997)
Plant Mol. Biol.
, vol.33
, pp. 1051-1058
-
-
Wang, S.1
Zhang, Q.2
Maughan, P.J.3
Saghai-Maroof, M.A.4
-
200
-
-
0033535963
-
The distribution and copy number of copia-ke retrotransposons in rice (Oryza sativa) and their implications in the organization and evolution of the rice genome
-
199. Wang SP, Liu N, Peng KM, Zhang QF. 1999. The distribution and copy number of copia-ke retrotransposons in rice (Oryza sativa) and their implications in the organization and evolution of the rice genome. Proc. Natl. Acad. Sci. USA 96:6824-28
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 6824-6828
-
-
Wang, S.P.1
Liu, N.2
Peng, K.M.3
Zhang, Q.F.4
-
201
-
-
0027551362
-
Isolation of an asparagus intracellular PR gene (AoPR) wound-responsive promoter by the inverse polymerase chain reaction and its characterisation in transgenic tobacco
-
200. Warner SA, Scott RJ, Draper J. 1993. Isolation of an asparagus intracellular PR gene (AoPR) wound-responsive promoter by the inverse polymerase chain reaction and its characterisation in transgenic tobacco. Plant J. 3:191-201
-
(1993)
Plant J.
, vol.3
, pp. 191-201
-
-
Warner, S.A.1
Scott, R.J.2
Draper, J.3
-
202
-
-
0030991387
-
Genetic distribution of BARE-1-like retrotransposable elements in the barley genome revealed by sequence-specific amplification polymorphisms (S-SAP)
-
201. Waugh R, McLean K, Flavell AJ, Pearce SR, Kumar A, etal. 1997. Genetic distribution of BARE-1-like retrotransposable elements in the barley genome revealed by sequence-specific amplification polymorphisms (S-SAP). Mol. Gen. Genet. 253:687-94
-
(1997)
Mol. Gen. Genet.
, vol.253
, pp. 687-694
-
-
Waugh, R.1
McLean, K.2
Flavell, A.J.3
Pearce, S.R.4
Kumar, A.5
-
203
-
-
0029583698
-
LTR-retrotransposons and MITES, important players in the evolution of plant genomes
-
202. Wessler SR, Bureau TE, White SE. 1995. LTR-retrotransposons and MITES, important players in the evolution of plant genomes. Curr. Opin. Genet. Dev. 5:814-21
-
(1995)
Curr. Opin. Genet. Dev.
, vol.5
, pp. 814-821
-
-
Wessler, S.R.1
Bureau, T.E.2
White, S.E.3
-
204
-
-
0028053733
-
Retrotransposons in the flanking regions of normal plant genes-a role for copia-like elements in the evolution of gene structure and expression
-
203. White SE, Habera LF, Wessler SR. 1994. Retrotransposons in the flanking regions of normal plant genes-a role for copia-like elements in the evolution of gene structure and expression. Proc. Natl. Acad. Sci. USA 91:11792-96
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 11792-11796
-
-
White, S.E.1
Habera, L.F.2
Wessler, S.R.3
-
205
-
-
0021007105
-
Transposable elements in yeast
-
204. Williamson VM. 1983. Transposable elements in yeast. Int. Rev. Cytol. 83:1-25
-
(1983)
Int. Rev. Cytol.
, vol.83
, pp. 1-25
-
-
Williamson, V.M.1
-
206
-
-
0030065451
-
Multiple non-LTR retrotransposons in the genome of Arabidopsis thaliana
-
205. Wright DA, Ke N, Smalle J, Hauge BM, Goodman HM, Voytas DF. 1996. Multiple non-LTR retrotransposons in the genome of Arabidopsis thaliana. Genetics 142:569-78
-
(1996)
Genetics
, vol.142
, pp. 569-578
-
-
Wright, D.A.1
Ke, N.2
Smalle, J.3
Hauge, B.M.4
Goodman, H.M.5
Voytas, D.F.6
-
207
-
-
0031747556
-
Potential retroviruses in plants: Tat1 is related to a group of Arabidopsis thaliana Ty3/gypsy retrotransposons that encode envelopelike proteins
-
206. Wright DA, Voytas DF. 1998. Potential retroviruses in plants: Tat1 is related to a group of Arabidopsis thaliana Ty3/gypsy retrotransposons that encode envelopelike proteins. Genetics 149:703-15
-
(1998)
Genetics
, vol.149
, pp. 703-715
-
-
Wright, D.A.1
Voytas, D.F.2
-
208
-
-
0025006614
-
Origin and evolution of retroelements based upon their reverse transcriptase sequences
-
207. Xiong Y, Eickbush TH. 1990. Origin and evolution of retroelements based upon their reverse transcriptase sequences. EMBO J. 9:3353-62
-
(1990)
EMBO J.
, vol.9
, pp. 3353-3362
-
-
Xiong, Y.1
Eickbush, T.H.2
-
209
-
-
0030840954
-
Cytosine methylation and the ecology of intragenomic parasites
-
208. Yoder JA, Walsh CP, Bestor TH. 1997. Cytosine methylation and the ecology of intragenomic parasites. Trends Genet. 13: 335-40
-
(1997)
Trends Genet.
, vol.13
, pp. 335-340
-
-
Yoder, J.A.1
Walsh, C.P.2
Bestor, T.H.3
-
211
-
-
0027260466
-
Molecular characterization of a short interspersed repetitive element from tobacco that exhibits sequence homology to specific tRNAs
-
210. Yoshioka Y, Matsumoto S, Kjima S, Ohshima K, Okada N, Machida Y 1993. Molecular characterization of a short interspersed repetitive element from tobacco that exhibits sequence homology to specific tRNAs. Proc. Nail. Acad. Sci. USA 90:6562-66
-
(1993)
Proc. Nail. Acad. Sci. USA
, vol.90
, pp. 6562-6566
-
-
Yoshioka, Y.1
Matsumoto, S.2
Kjima, S.3
Ohshima, K.4
Okada, N.5
Machida, Y.6
-
212
-
-
0030786347
-
Silent chromatin determines target preference of the Saccharomyces retrotransposon Ty5
-
211. Zou S, Voytas DF. 1997. Silent chromatin determines target preference of the Saccharomyces retrotransposon Ty5. Proc. Natl. Acad. Sci. USA 94:7412-16
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 7412-7416
-
-
Zou, S.1
Voytas, D.F.2
|