메뉴 건너뛰기




Volumn 41, Issue 3, 1998, Pages 357-367

Characterisation and physical localisation of Ty1-copia-like retrotransposons in four Alstroemeria species

Author keywords

Alstroemeria; Genome organisation; In situ hybridisation; Retrotransposable elements; Ty1 copia

Indexed keywords

ALSTROEMERIA AUREA; ALSTROEMERIA PELEGRINA; AMINO ACID SEQUENCE; BRAZIL; CHILE; CHROMOSOMAL LOCALIZATION; CLUSTER ANALYSIS; GENETIC CHARACTERISTICS; GENETIC DIVERSITY; GENOMIC DNA; HETEROCHROMATIN; HETEROGENEITY; HYBRIDIZATION; PHYLOGENY; PLANT GENETICS; PLANT GENOME; POLYMERASE CHAIN REACTION; RETROPOSON; REVERSE TRANSCRIPTION; RIBOSOMAL DNA;

EID: 0032096363     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/g98-048     Document Type: Article
Times cited : (17)

References (36)
  • 1
    • 0001804977 scopus 로고
    • The phytogeography of the genus Alstroemeria
    • (La Jolla, Calif.), International Journal of the American Plant Life Society
    • Aker, S., and Healy, W. 1990. The phytogeography of the genus Alstroemeria. Herbertia (La Jolla, Calif.), Vol. 46. International Journal of the American Plant Life Society. pp. 76-87.
    • (1990) Herbertia , vol.46 , pp. 76-87
    • Aker, S.1    Healy, W.2
  • 3
    • 0000637348 scopus 로고    scopus 로고
    • Do plants have a one-way ticket to genomic obesity?
    • Bennetzen, J.L., and Kellogg, E.A. 1997. Do plants have a one-way ticket to genomic obesity? Plant Cell, 9: 1509-1524.
    • (1997) Plant Cell , vol.9 , pp. 1509-1524
    • Bennetzen, J.L.1    Kellogg, E.A.2
  • 4
    • 0002765558 scopus 로고
    • Transposable elements in Saccharomyces cerevisiae
    • Edited by D.E. Berg and M.M. Howe. American Society for Microbiology, Washington, D.C.
    • Boeke, J. 1989. Transposable elements in Saccharomyces cerevisiae. In Mobile DNA. Edited by D.E. Berg and M.M. Howe. American Society for Microbiology, Washington, D.C. pp. 335-374.
    • (1989) Mobile DNA , pp. 335-374
    • Boeke, J.1
  • 5
    • 0031046820 scopus 로고    scopus 로고
    • Comparative analysis of the chromosomal and genomic organization of Ty1-copia like retrotransposons in pteridophytes, gymnosperms and angiosperms
    • Brandes, A., Heslop-Harrison, J.S., Kamm, A., Kubis, S., Doudrick, R.L., and Schmidt, T. 1997. Comparative analysis of the chromosomal and genomic organization of Ty1-copia like retrotransposons in pteridophytes, gymnosperms and angiosperms. Plant Mol. Biol. 33: 11-21.
    • (1997) Plant Mol. Biol. , vol.33 , pp. 11-21
    • Brandes, A.1    Heslop-Harrison, J.S.2    Kamm, A.3    Kubis, S.4    Doudrick, R.L.5    Schmidt, T.6
  • 6
    • 0029835488 scopus 로고    scopus 로고
    • Giemsa C-banded karyotypes of Alstroemeria L. and some of their hybrids
    • London
    • Buitendijk, J.H., and Ramanna, M.S. 1996. Giemsa C-banded karyotypes of Alstroemeria L. and some of their hybrids. Ann. Bot. (London), 78: 449-457.
    • (1996) Ann. Bot. , vol.78 , pp. 449-457
    • Buitendijk, J.H.1    Ramanna, M.S.2
  • 7
    • 0030908676 scopus 로고    scopus 로고
    • Nuclear DNA content in twelve species of Alstroemeria L. and some of their hybrids
    • London
    • Buitendijk, J.H., Boon, E.J., and Ramanna, M.S. 1997. Nuclear DNA content in twelve species of Alstroemeria L. and some of their hybrids. Ann. Bot. (London), 79: 343-353.
    • (1997) Ann. Bot. , vol.79 , pp. 343-353
    • Buitendijk, J.H.1    Boon, E.J.2    Ramanna, M.S.3
  • 8
    • 0021956741 scopus 로고
    • Nucleotide sequence of a yeast Ty element: Evidence for an unusual mechanism of gene expression
    • Clare, J., and Farabaugh, P. 1985. Nucleotide sequence of a yeast Ty element: evidence for an unusual mechanism of gene expression. Proc. Natl. Acad. Sci. U.S.A. 82: 2829-2833.
    • (1985) Proc. Natl. Acad. Sci. U.S.A. , vol.82 , pp. 2829-2833
    • Clare, J.1    Farabaugh, P.2
  • 10
    • 0030789923 scopus 로고    scopus 로고
    • Characterization and localization of repetitive DNA sequences in the ornamental Alstroemeria aurea Graham
    • de Jeu, M.J., Lasschuit, J., Kuipers, A.G.J., Kamstra, S.A., and Visser, R.G.F. 1997. Characterization and localization of repetitive DNA sequences in the ornamental Alstroemeria aurea Graham. Theor. Appl. Genet. 94: 982-990.
    • (1997) Theor. Appl. Genet. , vol.94 , pp. 982-990
    • De Jeu, M.J.1    Lasschuit, J.2    Kuipers, A.G.J.3    Kamstra, S.A.4    Visser, R.G.F.5
  • 11
    • 0026516955 scopus 로고
    • Extreme heterogeneity of Ty1-copia group retrotransposons in plants
    • Flavell, A.J., Smith, D.B., and Kumar, A. 1992a. Extreme heterogeneity of Ty1-copia group retrotransposons in plants. Mol. Gen. Genet. 231: 233-242.
    • (1992) Mol. Gen. Genet. , vol.231 , pp. 233-242
    • Flavell, A.J.1    Smith, D.B.2    Kumar, A.3
  • 12
  • 14
    • 0018614061 scopus 로고
    • Cloning and characterization of ribosomal RNA genes from wheat and barley
    • Gerlach, W.L., and Bedbrook, J.R. 1979. Cloning and characterization of ribosomal RNA genes from wheat and barley. Nucleic Acids Res. 7: 1869-1885.
    • (1979) Nucleic Acids Res. , vol.7 , pp. 1869-1885
    • Gerlach, W.L.1    Bedbrook, J.R.2
  • 15
    • 0024978849 scopus 로고
    • Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics
    • Grandbastien, M.A., Spielmann, A., and Caboche, M. 1989. Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics. Nature (London), 337: 376-380.
    • (1989) Nature (London) , vol.337 , pp. 376-380
    • Grandbastien, M.A.1    Spielmann, A.2    Caboche, M.3
  • 17
    • 0029920981 scopus 로고    scopus 로고
    • The genomic and physical organization of Ty1-copia-like sequences as a complement of large genomes in Pinus elliottii var. elliottii and other gymnosperms
    • Kamm, A., Doudrick, R.L., Heslop-Harrison, J.S., and Schmidt, T. 1996. The genomic and physical organization of Ty1-copia-like sequences as a complement of large genomes in Pinus elliottii var. elliottii and other gymnosperms. Proc. Natl. Acad. Sci. U.S.A. 93: 2708-2713.
    • (1996) Proc. Natl. Acad. Sci. U.S.A. , vol.93 , pp. 2708-2713
    • Kamm, A.1    Doudrick, R.L.2    Heslop-Harrison, J.S.3    Schmidt, T.4
  • 18
    • 0031251878 scopus 로고    scopus 로고
    • Physical localisation of repetitive DNA sequences in Alstroemeria: Karyotyping of two species with species-specific and ribosomal DNA
    • Kamstra, S.A., Kuipers, A.G.J., De Jeu, M.J., Ramanna, M.S., and Jacobsen, E. 1997. Physical localisation of repetitive DNA sequences in Alstroemeria: karyotyping of two species with species-specific and ribosomal DNA. Genome, 40: 652-658.
    • (1997) Genome , vol.40 , pp. 652-658
    • Kamstra, S.A.1    Kuipers, A.G.J.2    De Jeu, M.J.3    Ramanna, M.S.4    Jacobsen, E.5
  • 19
    • 0030113185 scopus 로고
    • Chromosomal and genomic organization of Ty1-copia-like retrotransposon sequences in the genus Avena
    • Katsiotis, A., Schmidt, T., and Heslop-Harrison, J.S. 1995. Chromosomal and genomic organization of Ty1-copia-like retrotransposon sequences in the genus Avena. Genome, 39: 410-417.
    • (1995) Genome , vol.39 , pp. 410-417
    • Katsiotis, A.1    Schmidt, T.2    Heslop-Harrison, J.S.3
  • 20
    • 0030889533 scopus 로고    scopus 로고
    • Molecular cytogenetics of Alstroemeria: Identification of parental genomes in interspecific hybrids and characterization of repetitive DNA families in constitutive heterochromatin
    • Kuipers, A.G.J., van Os, D.P.M., de Jong, J.H., and Ramanna, M.S. 1997. Molecular cytogenetics of Alstroemeria: identification of parental genomes in interspecific hybrids and characterization of repetitive DNA families in constitutive heterochromatin. Chromosome Res. 5: 31-39.
    • (1997) Chromosome Res. , vol.5 , pp. 31-39
    • Kuipers, A.G.J.1    Van Os, D.P.M.2    De Jong, J.H.3    Ramanna, M.S.4
  • 21
    • 0029670608 scopus 로고    scopus 로고
    • The adventures of the Ty1-copia group of retrotransposons in plants
    • Kumar, A. 1996, the adventures of the Ty1-copia group of retrotransposons in plants. Trends Genet. 12: 41-43.
    • (1996) Trends Genet. , vol.12 , pp. 41-43
    • Kumar, A.1
  • 22
    • 0027500625 scopus 로고
    • An abundant LINE-like element amplified in the genome of Lilium speciosum
    • Leeton, P.R.J., and Smyth, D.R. 1993. An abundant LINE-like element amplified in the genome of Lilium speciosum. Mol. Gen. Genet. 237: 97-104.
    • (1993) Mol. Gen. Genet. , vol.237 , pp. 97-104
    • Leeton, P.R.J.1    Smyth, D.R.2
  • 23
    • 0027651273 scopus 로고
    • BARE-1, a copia-like retroelement in barley (Hordeum vulgare L.)
    • Manninen, I., and Schulman, A.H. 1993. BARE-1, a copia-like retroelement in barley (Hordeum vulgare L.). Plant Mol. Biol. 22: 829-846.
    • (1993) Plant Mol. Biol. , vol.22 , pp. 829-846
    • Manninen, I.1    Schulman, A.H.2
  • 24
    • 0026072613 scopus 로고
    • BIS 1, a major component of the cereal genome and a tool for studying genomic organization
    • Moore, G., Cheung, W., Schwarzacher, T., and Flavell, R. 1991. BIS 1, a major component of the cereal genome and a tool for studying genomic organization. Genomics, 10: 469-476.
    • (1991) Genomics , vol.10 , pp. 469-476
    • Moore, G.1    Cheung, W.2    Schwarzacher, T.3    Flavell, R.4
  • 25
    • 0021879662 scopus 로고
    • Complete nucleotide sequence of the Drosophila transposable element copia: Homology between copia and retroviral proteins
    • Mount, S.M., and Rubin, G.M. 1985. Complete nucleotide sequence of the Drosophila transposable element copia: homology between copia and retroviral proteins. Mol. Cell. Biol. 5: 1630-1638.
    • (1985) Mol. Cell. Biol. , vol.5 , pp. 1630-1638
    • Mount, S.M.1    Rubin, G.M.2
  • 26
    • 0029986858 scopus 로고    scopus 로고
    • The Ty1-copia group retrotransposons in Vicia species: Copy number, sequence heterogeneity and chromosomal localisation
    • Pearce, S.R., Harrison, G., Li, D., Heslop-Harrison, J.S., Kumar, A., and Flavell, A.J. 1996a. The Ty1-copia group retrotransposons in Vicia species: copy number, sequence heterogeneity and chromosomal localisation. Mol. Gen. Genet. 250: 305-315.
    • (1996) Mol. Gen. Genet. , vol.250 , pp. 305-315
    • Pearce, S.R.1    Harrison, G.2    Li, D.3    Heslop-Harrison, J.S.4    Kumar, A.5    Flavell, A.J.6
  • 27
    • 0029742464 scopus 로고    scopus 로고
    • The Ty1-copia group retrotransposons of Allium cepa are distributed throughout the chromosomes but are enriched in the terminal heterochromatin
    • Pearce, S.R., Pich, U., Harrison, G., Flavell, A.J., Heslop-Harrison, J.S., Schubert, I., and Kumar, A. 1996b. The Ty1-copia group retrotransposons of Allium cepa are distributed throughout the chromosomes but are enriched in the terminal heterochromatin. Chromosome Res. 4: 357-364.
    • (1996) Chromosome Res. , vol.4 , pp. 357-364
    • Pearce, S.R.1    Pich, U.2    Harrison, G.3    Flavell, A.J.4    Heslop-Harrison, J.S.5    Schubert, I.6    Kumar, A.7
  • 28
    • 0000847389 scopus 로고    scopus 로고
    • Slow but steady: Reduction of genome size through biased mutation
    • Petrov, D. 1997. Slow but steady: reduction of genome size through biased mutation. Plant Cell, 9: 1900-1901.
    • (1997) Plant Cell , vol.9 , pp. 1900-1901
    • Petrov, D.1
  • 29
    • 0026696624 scopus 로고
    • Nucleosomes, DNA-binding proteins, and DNA sequence modulate retroviral integration target site selection
    • Pryciak, P.M., and Varmus, H.E. 1992. Nucleosomes, DNA-binding proteins, and DNA sequence modulate retroviral integration target site selection. Cell, 69: 769-780.
    • (1992) Cell , vol.69 , pp. 769-780
    • Pryciak, P.M.1    Varmus, H.E.2
  • 30
    • 0001810352 scopus 로고
    • Extraction of DNA from plant tissues
    • Edited by S.B. Gelvin and R.A. Schilperoort. Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Rogers, S.O., and Bendich, A.J., 1988. Extraction of DNA from plant tissues. In Plant molecular biology manual. Edited by S.B. Gelvin and R.A. Schilperoort. Kluwer Academic Publishers, Dordrecht, The Netherlands. pp. A6/1-11.
    • (1988) Plant Molecular Biology Manual
    • Rogers, S.O.1    Bendich, A.J.2
  • 32
    • 0029058136 scopus 로고
    • Analysis and chromosomal localization of retrotransposons in sugar beet (Beta vulgaris L.): LINEs and Ty1-copia-like elements as major components of the genome
    • Schmidt, T., Kubis, S., and Heslop-Harrison, J.S. 1995. Analysis and chromosomal localization of retrotransposons in sugar beet (Beta vulgaris L.): LINEs and Ty1-copia-like elements as major components of the genome. Chromosome Res. 3: 335-345.
    • (1995) Chromosome Res. , vol.3 , pp. 335-345
    • Schmidt, T.1    Kubis, S.2    Heslop-Harrison, J.S.3
  • 33
    • 0024570452 scopus 로고
    • An element with long terminal repeats and its variant arrangements in the genome of Lilium henryi
    • Sentry, J.W., and Smyth, D.R. 1989. An element with long terminal repeats and its variant arrangements in the genome of Lilium henryi. Mol. Gen. Genet. 215: 349-354.
    • (1989) Mol. Gen. Genet. , vol.215 , pp. 349-354
    • Sentry, J.W.1    Smyth, D.R.2
  • 34
    • 0024290711 scopus 로고
    • A copia-like transposable element family in Arabidopsis thaliana
    • Voytas, D.F., and Ausubel, F.M. 1988. A copia-like transposable element family in Arabidopsis thaliana. Nature (London), 336: 242-244.
    • (1988) Nature (London) , vol.336 , pp. 242-244
    • Voytas, D.F.1    Ausubel, F.M.2
  • 36
    • 0028053733 scopus 로고
    • Retrotransposons in the flanking regions of normal plant genes: A role for copia-like elements in the evolution of gene structure and expression
    • White, S.E., Habera, L.F., and Wessler, S.R. 1994. Retrotransposons in the flanking regions of normal plant genes: a role for copia-like elements in the evolution of gene structure and expression. Proc. Natl. Acad. Sci. U.S.A. 91: 11 792-11 796.
    • (1994) Proc. Natl. Acad. Sci. U.S.A. , vol.91 , pp. 11792-11796
    • White, S.E.1    Habera, L.F.2    Wessler, S.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.