The enzymes of oxalate metabolism: Unexpected structures and mechanisms

Archives of Biochemistry and Biophysics

Volumn 433, Issue 1, 2005, Pages 176-192

  Svedružić, Draženka ^a   Jónsson, Stefán ^a   Toyota, Cory G ^a   Reinhardt, Laurie A ^b   Ricagno, Stefano ^c   Lindqvist, Ylva ^b   Richards, Nigel G J ^a  

^a Gainesville FL 32611 7200 USA ^*  (United States)

^b UNIVERSITY OF WISCONSIN MADISON   (United States)

^c KAROLINSKA INSTITUTE   (Sweden)

Author keywords

Enzyme mechanism; Formyl CoA transferase; Hyperoxaluria; Oxalate decarboxylase; Oxalate oxidase; Oxalobacter formigenes; Oxalyl CoA decarboxylase; Protein structure

Indexed keywords

CARBON DIOXIDE; ENZYME; FORMIC ACID; FORMYL COENZYME TRANSFERASE; OXALATE DECARBOXYLASE; OXALATE OXIDASE; OXALIC ACID; OXALYL COENZYME DECARBOXYLASE; PROTEIN; UNCLASSIFIED DRUG;

BACTERIUM; CATALYST; CELL METABOLISM; CHEMICAL BOND; ENZYME ACTIVITY; ENZYME MECHANISM; ENZYME STRUCTURE; FUNGUS; MOLECULAR DYNAMICS; MOLECULAR EVOLUTION; NONHUMAN; PHYTOCHEMISTRY; PRIORITY JOURNAL; PROTEIN STRUCTURE; SHORT SURVEY;

BINDING SITES; CARBOXY-LYASES; CATALYSIS; CRYSTALLOGRAPHY, X-RAY; DIMERIZATION; ELECTRON SPIN RESONANCE SPECTROSCOPY; ENZYMES; HYDROGEN BONDING; KINETICS; MODELS, MOLECULAR; MODELS, STRUCTURAL; MOLECULAR CONFORMATION; OXALATES; OXIDOREDUCTASES; PROTEIN BINDING; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; WATER;

FUNGI; OXALOBACTER FORMIGENES;

EID: 9744241004     PISSN: 00039861     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.abb.2004.08.032     Document Type: Short Survey

References (184)

1. A. Hodgkinson Oxalic Acid in Biology and Medicine 1977 Academic Press London
2. H.E. Williams, and T.R. Wandzilak J. Urol. 141 1989 742 747
3. H. Sidhu, B. Hoppe, A. Hesse, K. Tenbrock, S. Brömme, E. Rietschel, and A.B. Peck Lancet 352 1998 1026 1029
4. M.J. Allison, H.M. Cook, D.B. Milne, S. Gallagher, and R.V. Clayman J. Nutr. 116 1986 455 460
5. M.J. Allison, K.A. Dawson, W.R. Mayberry, and J.G. Foss Arch. Microbiol. 141 1985 1 7
6. K.A. Dawson, M.J. Allison, and P.A. Hartman Appl. Environ. Microbiol. 40 1980 833 839
7. H. Sidhu, M.E. Schmidt, J.G. Cornelius, S. Thamilselyan, S.R. Khan, A. Hesse, and A.B. Peck J. Am. Soc. Nephrol. 14 1999 S334 S340
8. C.S. Stewart, S.H. Duncan, and D.R. Cave FEMS Microbiol. Lett. 230 2004 1 7
9. J.M. Dunwell, S. Khuri, and P.J. Gane Microbiol. Mol. Biol. Rev. 64 2000 153 179
10. L.A. Reinhardt, D. Svedruzic, W.W. Cleland, and N.G.J. Richards J. Am. Chem. Soc. 125 2003 1244 1252
11. V.P. Kotsira, and Y.D. Clonis Arch. Biochem. Biophys. 340 1997 239 249
12. H. Shimazono J. Biochem. (Tokyo) 42 1955 321 340
13. J.R. Quayle Biochem. J. 87 1963 368 373
14. M.M. Whittaker, and J.W. Whittaker J. Biol. Inorg. Chem. 7 2002 136 145
15. G. Kohlbecker, and M. Butz J. Clin. Chem. Clin. Biochem. 19 1981 1103 1106
16. M. Thakur, L. Goyal, and C.S. Pundir J. Biochem. Biophys. Methods 44 2000 77 88
17. C. Thompson, J.M. Dunwell, C.E. Johnstone, V. Lay, J. Ray, M. Schmitt, H. Watson, and G. Nisbet Euphytica 85 1995 169 172
18. J. Chiriboga Arch. Biochem. Biophys. 116 1966 516 523
19. M. Sugiura, H. Yamamura, K. Hirano, M. Sasaki, M. Morikawa, and M. Tsuboi Chem. Pharm. Bull. 27 1979 2003 2007
20. L. Requena, and S. Bornemann Biochem. J 343 1999 185 190
21. L. Goyal, M. Thakur, and C.S. Pundir Plant Sci. 142 1999 21 28
22. P. Varalakshmi, and K.E. Richardson Biochem. Int. 26 1992 153 162
23. A.E. Leek, B. Halliwell, and V.S. Butt Biochim. Biophys. Acta 286 1972 299 311
24. Satyapal, and C.S. Pundir Biochim. Biophys. Acta 1161 1993 1 5
25. C.S. Pundir, N.K. Kuchhal, and Satyapal Indian J. Biochem. Biophys. 30 1993 54 57
26. B.G. Lane Biochem. J. 349 2000 309 321
27. B.G. Lane, A.C. Cuming, J. Fregeau, N.C. Carpita, W.J. Hurkman, F. Bernier, E. Dratewka-Kos, and T.D. Kennedy Eur. J. Biochem. 209 1992 961 969
28. P. Wojtaszek Biochem. J. 322 1997 681 692
29. B. Dumas, G. Freyssinet, and K.E. Pallett Plant Physiol. 107 1995 1091 1096
30. Z. Zhang, D. Collinge, and H. Thordal-Christensen Plant J. 8 1995 139 145
31. W.J. Hurkman, and C.K. Tanaka Plant Physiol. 110 1996 971 977
32. B.G. Lane FASEB J 8 1994 294 301
33. E.W. Thompson, and B.G. Lane J. Biol. Chem. 255 1980 5965 5970
34. A.M. Showalter Plant Cell 5 1993 9 23
35. G.I. Cassab, and J.E. Varner Ann. Rev. Plant Physiol. 39 1988 321 353
36. C. Aguilar, U. Urzua, C. Koenig, and R. Vicuna Arch. Biochem. Biophys. 266 1999 275 282
37. A.S.I. Jaikaran, T.D. Kennedy, E. Dratewkakos, and B.G. Lane J. Biol. Chem. 265 1990 12503 12512
38. B.G. Lane, J.M. Dunwell, J.A. Ray, M.R. Schmitt, and A.C. Cuming J. Biol. Chem. 268 1993 12239 12242
39. W.C. McCubbin, C.M. Kay, T.D. Kennedy, and B.G. Lane Biochem. Cell Biol. 65 1987 1039 1048
40. Z.F. Grzelczak, and B.G. Lane Can. J. Biochem. Cell Biol. 61 1983 1233 1243
41. E.J. Woo, J.M. Dunwell, P.W. Goodenough, and R.W. Pickersgill FEBS Lett. 437 1998 87 90
42. F. Hamel, C. Breton, and M. Houde Planta 205 1998 531 538
43. F. Zhou, Z. Zhang, P.L. Gregersen, J.D. Mikkelsen, E. de Neergaard, D.B. Collinge, and H. Thordal-Christensen Plant Physiol. 117 1998 33 41
44. M. Vuletic, and V. Sukalovic Plant Sci. 157 2000 257 263
45. E. Le Deunff, C. Davoine, C. Le Dantec, J.P. Billard, and C. Hualt Plant J. 38 2004 421 431
46. S.F. Altschul, T.L. Madden, A.A. Schäffer, J. Zhang, Z. Zhang, W. Miller, and D.J. Lipman Nucleic Acids Res. 25 1997 3389 3402
47. J.M. Dunwell, A. Purvis, and S. Khuri Phytochemistry 65 2004 7 17
48. J.M. Dunwell, and P.J. Gane J. Mol. Evol. 46 1998 147 154
49. J.M. Dunwell, A. Culham, C.E. Carter, C.R. Sosa-Aguirre, and P.W. Goodenough Trends Biochem. Sci. 26 2001 740 745
50. S. Khuri, F.T. Bakker, and J.M. Dunwell Mol. Biol. Evol. 18 2001 593 605
51. J.M. Dunwell Biotechnol. Genet. Eng. Rev. 15 1998 1 32
52. P.J. Gane, J.M. Dunwell, and J. Warwicker J. Mol. Evol. 46 1998 488 493
53. R. Sanchez, and A. Sǎli Curr. Opin. Struct. Biol. 7 1997 206 214
54. A. Sǎli, and T.L. Blundell J. Mol. Biol. 234 1993 779 815
55. T.-P. Ko, J.D. Ng, and A. McPherson Plant Physiol. 101 1993 729 744
56. M.C. Lawrence, T. Izard, M. Beuchat, R.J. Blagrove, and P.M. Colman J. Mol. Biol. 238 1994 748 776
57. M.C. Lawrence, E. Suzuki, J.N. Varghese, P.C. Davis, A. Van Donkelaar, P.A. Tulloch, and P.M. Colman EMBO J. 9 1990 9 15
58. L. Regan Trends Biochem. Sci. 20 1995 280 285
59. P.K. Datta, and B.J.D. Meeuse Biochim. Biophys. Acta 17 1955 602 603
60. E.J. Woo, J.M. Dunwell, P.W. Goodenough, A.C. Marvier, and R.W. Pickersgill Nat. Struct. Biol. 7 2000 1036 1040
61. H.C. Dawkes, and S.E.V. Phillips Curr. Opin. Struct. Biol. 11 2001 666 673
62. J.P. Klinman, and D. Mu Annu. Rev. Biochem. 63 1994 299 344
63. J.W. Whittaker Chem. Rev. 103 2003 2347 2363
64. A. Berna, and F. Bernier Plant Mol. Biol. 33 1997 417 429
65. G.E. Kalbus, V.T. Lieu, and L.H. Kalbus J. Chem. Educ. 81 2004 100 102
66. J.S.B Park, P.M. Wood, M.J. Davies, B.C. Gilbert, and A.C. Whitwood Free Rad. Res. 27 1997 447 458
67. C.K. Vance, and A.-F. Miller J. Am. Chem. Soc. 120 1998 461 467
68. J.W. Whittaker, and M.M. Whittaker J. Am. Chem. Soc. 113 1991 528 5540
69. M.W. Vetting, L.P. Wackett, L. Que Jr., J.D. Lipscomb, and D.H. Ohlendorf J. Bacteriol. 186 2004 1945 1958
70. M.F. Reynolds, M. Costas, M. Ito, D.H. Jo, A.A. Tipton, A.K. Whiting, and L. Que Jr. J. Biol. Inorg. Chem. 8 2003 263 272
71. H. Shimazono, and O. Hayaishi J. Biol. Chem. 227 1957 151 159
72. P. Magro, P. Marciano, and P. Di Lenna FEMS Microbiol. Lett. 49 1988 49 52
73. M.V. Dutton, M. Kathiara, I.M. Gallagher, and C.S. Evans FEMS Microbiol. Lett. 116 1994 321 326
74. E.B. Lillehoj, and F.G. Smith Arch. Biochem. Biophys. 109 1965 216 220
75. E. Emiliani, and P. Bekes Arch. Biochem. Biophys. 105 1964 488 493
76. E. Emiliani, and B. Riera Biochim. Biophys. Acta 167 1968 414 421
77. M. Kathiara, D.A. Wood, and C.S. Evans Mycol. Res. 104 2000 345 350
78. J.A. Micales Int. J. Biodeter. Biodegr. 39 1997 125 132
79. M. Mäkelä, S. Galkin, A. Hatakka, and T. Lundell Enzyme Microb. Technol. 30 2002 542 549
80. A. Mehta, and A. Datta J. Biol. Chem. 266 1991 23548 23553
81. M. Azam, M. Kesarwani, S. Chakraborty, K. Natarajan, and A. Datta Biochem. J. 367 2002 67 75
82. M. Azam, M. Kesarwani, K. Natarajan, and A. Datta Biochem. Biophys. Res. Commun. 289 2001 807 812
83. M. Kesarwani, M. Azam, K. Natarajan, A. Mehta, and A. Datta J. Biol. Chem. 275 2000 7230 7238
84. C.J. Scelonge, D.L. Bidney, Gene encoding oxalate decarboxylase from Aspergillus phoenices. 16 October 1998, US Patent 6,303,846 B1
85. A. Tanner, and S. Bornemann J. Bacteriol. 182 2000 5271 5273
86. P.D. Cotter, and C. Hill Microbiol. Mol. Biol. Rev. 67 2003 429 453
87. F. Kunst, N. Ogasawara, I. Moszer, A.M. Albertini, G. Alloni, V. Azevedo, M.G. Bertero, P. Bessières, A. Bolotin, S. Borchert, R. Borriss, L. Boursier, A. Brans, M. Braun, S.C. Brignell, S. Bron, S. Brouillet, C.V. Bruschi, B. Caldwell, V. Capuano, N.M. Carter, S.-K. Choi, J.-J. Codani, I.F. Connerton, N.J. Cummings, R.A. Daniel, F. Denizot, K.M. Devine, A. Düsterhöpf, S.D. Ehrlich, P.T. Emmerson, K.D. Entian, J. Errington, C. Fabret, E. Ferrari, D. Foulger, C. Fritz, M. Fujita, Y. Fujita, S. Fuma, A. Galizzi, N. Galleron, S.-Y. Ghim, P. Glaser, A. Goffeau, E.J. Golightly, G. Grandi, G. Guiseppi, B.J. Guy, K. Haga, J. Haiech, C.R. Harwood, A. Hénaut, H. Hilbert, S. Holsappel, S. Hosono, M.-F. Hullo, M. Itaya, L. Jones, B. Joris, D. Karamata, Y. Kasahara, M. Klaerr-Blanchard, C. Klein, Y. Kobayashi, P. Koetter, G. Koningstein, S. Krogh, M. Kumano, K. Kurita, A. Lapidus, S. Lardinois, J. Lauber, V. Lazarevic, S.-M. Lee, A. Levine, H. Liu, S. Masuda, C. Mauël, C. Médigue, N. Medina, R.P. Mellado, M. Mizuno, D. Moestl, S. Nakai, M. Noback, D. Noone, M. O'Reilly, K. Ogawa, A. Ogiwara, B. Oudega, S.-H. Park, V. Parro, T.M. Pohl, D. Portetelle, S. Porwollik, A.M. Prescott, E. Presecan, P. Pujic, B. Purnelle, G. Rapoport, M. Rey, S. Reynolds, M. Rieger, C. Rivolta, E. Rocha, B. Roche, M. Rose, Y. Sadaie, T. Sato, E. Scanlan, S. Schleich, R. Schroeter, F. Scoffone, J. Sekiguchi, A. Sekowska, S.J. Seror, P. Serror, B.-S. Shin, B. Soldo, A. Sorokin, E. Tacconi, T. Takagi, H. Takahashi, K. Takemaru, M. Takeuchi, A. Tamakoshi, T. Tanaka, P. Terpstra, A. Tognoni, V. Tasato, S. Uchiyama, M. Vandenbol, F. Vannier, A. Vassarotti, A. Viari, R. Wambutt, E. Wedler, H. Wedler, T. Weitzenegger, P. Winters, A. Wipat, H. Yamamoto, K. Yamane, K. Yasumoto, K. Yata, K. Yoshida, H.-F. Yoshikawa, E. Zumstein, H. Yoshikawa, and A. Danchin Nature 390 1997 249 256
88. A. Tanner, L. Bowater, S.A. Fairhurst, and S. Bornemann J. Biol. Chem. 276 2001 43627 43634
89. T. Costa, L. Steil, L.O. Martins, U. Völker, and A.O. Henriques J. Bacteriol. 186 2004 1462 1474
90. L. Bowater, S.A. Fairhurst, V.J. Just, and S. Bornemann FEBS Lett. 557 2004 45 48
91. B.M. Barney, M.R. Schaab, R. LoBrutto, and W.A. Francisco Prot. Expr. Purif. 35 2004 131 141
92. R. Schwarzenbacher, F. von Delft, L. Jaroszewski, P. Abdubek, E. Ambing, T. Biorac, L.S. Brinen, J.M. Canaves, J. Cambell, H.J. Chiu, X. Dai, A.M. Deacon, M. Didonato, M.A. Elsliger, S. Eshagi, R. Floyd, A. Godzik, C. Grittini, S.K. Grzechnik, E. Hampton, C. Karlak, H.E. Klock, E. Koesma, J.S. Kovarik, A. Kreusch, P. Kuhn, S.A. Lesley, I. Levin, D. McMullan, T.M. McPhillips, M.D. Miller, A. Morse, K. Moy, J. Ouyang, R. Page, K. Quijano, A. Robb, G. Spraggon, R.C. Stevens, H. van der Bedem, J. Velasquez, J. Vincent, X. Wang, B. West, G. Wolf, Q. Xu, K.O. Hodgson, J. Wooley, and I.A. Wilson Proteins: Struct. Funct. Genet. 56 2004 392 395
93. S. Chakraborty, N. Chakraborty, D. Jain, M.D. Salunke, and A. Datta Prot. Sci. 11 2002 2138 2147
94. K. Mizuno, M.M. Whittaker, H.P. Bachinger, and J.W. Whittaker J. Biol. Chem. 279 2004 27339 27344
95. R. Anand, P.C. Dorrestein, C. Kinsland, T.P. Begley, and S.E. Ealick Biochemistry 41 2002 7659 7669
96. V.J. Just, C.E.M. Stevenson, L. Bowater, A. Tanner, D.M. Lawson, and S. Bornemann J. Biol. Chem. 279 2004 19867 19874
97. D.A. Kraut, K.S. Carroll, and D. Herschlag Annu. Rev. Biochem. 72 2003 517 571
98. J.A. Gerlt, and P.C. Babbitt Annu. Rev. Biochem. 70 2001 209 246
99. C.P. Ponting, and R.R. Russell Annu. Rev. Biophys. Biomol. Struct. 31 2002 45 71
100. P.J. O'Brien, and D. Herschlag Chem. Biol. 6 1999 R91 R105
101. J.A. Gerlt, and P.C. Babbitt Curr. Opin. Chem Biol. 2 1998 607 612
102. S. Fisher, L. Buxbaum, K. Toth, E. Eisenstadt, and S. Silver J. Bacteriol. 113 1973 1363 1372
103. W.W. Cleland Methods Enzymol. 249 1995 341 373
104. W.W. Cleland J. Biol. Chem. 278 2003 51975 51984
105. W.W. Cleland CRC Crit. Rev. Biochem. 13 1982 345 428
106. J.P. Klinman J. Biol. Inorg. Chem. 6 2001 1 13
107. Q.J. Su, and J.P. Klinman Biochemistry 37 1998 12513 12525
108. P.E.M. Siegbahn, and M.R.A. Blomberg Chem. Rev. 100 2000 421 437
109. T. Lovell, F. Himo, W.-G. Han, and L. Noodleman Coord. Chem. Rev. 238-239 2003 211 232
110. A.J. Boone, C.H. Chang, S.N. Greene, T. Herz, and N.G.J. Richards Coord. Chem. Rev. 238-239 2003 291 314
111. M. Jonsson, D.D.M. Wayner, and J. Lusztyk J. Phys. Chem. 100 1996 17539 17543
112. R.D. Britt, J.M. Peloquin, and K.A. Campbell Annu. Rev. Biophys. Biomol. Struct. 29 2000 463 495
113. N. Sahin Res. Microbiol. 154 2003 399 407
114. J.R. Quayle Biochem. J. 89 1963 492 503
115. G.M. Zaitsev, N.I. Govorukhina, O.V. Laskovneva, and Y.A. Trotsenko Microbiol. 62 1993 378 382
116. A.L. Baetz, and M.J. Allison J. Bacteriol. 171 1989 2605 2608
117. W.B. Jakoby, E. Ohmura, and O. Hayaishi J. Biol. Chem. 222 1956 435 446
118. W.B. Jakoby, and J.V. Bhat Bacteriol. Rev. 22 1958 75 80
119. J. Giovanelli, and N.F. Tobin Plant Physiol. 39 1964 139 144
120. J.R. Quayle, and D.B. Keech Biochem. J. 75 1960 515 523
121. V. Anatharam, M.J. Allison, and P.C. Maloney J. Biol. Chem. 264 1989 7244 72450
122. A.L. Baetz, and M.J. Allison Syst. Appl. Microbiol. 15 1992 167 171
123. R. Kluger Chem. Rev. 87 1987 863 876
124. F. Jordan Nat. Prod. Rep. 20 2003 184 201
125. W.P. Jencks Catalysis in Chemistry and Enzymology 1987 Dover New York
126. P. Arjunan, N. Nemeria, A. Brunskill, K. Chandrasekhar, M. Sax, Y. Yan, F. Jordan, J.R. Guest, and W. Furey Biochemistry 41 2002 5213 5221
127. R.N. Perham Biochemistry 30 1991 8501 8512
128. H.-Y. Lung, A.L. Baetz, and A.B. Peck J. Bacteriol. 176 1994 2468 2472
129. P. Arjunan, T. Umland, S. Dyda, S. Swaminathan, W. Furey, M. Sax, G.B. Farrenkopf, Y. Gao, D. Zhang, and F. Jordan J. Mol. Biol. 256 1996 590 600
130. D. Chipman, Z.A. Barak, and J.V. Schloss Biochim. Biophys. Acta 1385 1998 401 419
131. S.S. Pang, R.G. Duggleby, R.L. Schowen, and L.W. Guddat J. Biol. Chem. 279 2004 2242 2253
132. C.E. Bobst, and F.R. Tabita Arch. Biochem. Biophys. 426 2004 43 54
133. Y.Y. Chang, and J.E. Cronan Jr. J. Bacteriol. 170 1988 3937 3945
134. Y.Y. Chang, and J.E. Cronan Jr. J. Biol. Chem. 268 1993 3911 3919
135. N.K. Gupta, and B. Vennesland Arch. Biochem. Biophys. 113 1966 255 264
136. R.A. LaRossa, and J.V. Schloss J. Biol. Chem. 259 1984 8753 8757
137. K.H. Ott, J.G. Kwagh, G.W. Stockton, V. Sidorov, and G. Kakefuda J. Mol. Biol. 263 1996 359 368
138. J.V. Schloss, L.M. Ciskanik, and D.E. Van Dyck Nature (London) 331 1988 360 362
139. N.A. Cornick, and M.J. Allison Can. J. Microbiol. 42 1996 1219 1224
140. N.A. Cornick, and M.J. Allison Can. J. Microbiol. 42 1996 1081 1086
141. N.A. Cornick, and M.J. Allison Appl. Environ. Microbiol. 62 1996 3011 3013
142. F.R. Blattner, G. Plunkett III, C.A. Bolch, N.T. Perna, V. Burland, M. Riley, J. Collado-Vides, J.D. Glasner, C.K. Rode, G.F. Mayhew, J. Gregor, N.W. Davis, H.A. Kirkpatrick, M.A. Goeden, D.J. Rose, B. Mau, and Y. Shao Science 277 1997 1453 1462
143. A.L. Baetz, and M.J. Allison J. Bacteriol. 172 1990 3537 3540
144. H. Sidhu, S.D. Ogden, H.-Y. Kung, B.G. Luttge, A.L. Baetz, and A.B. Peck J. Bacteriol. 179 1997 3378 3381
145. J.R. Quayle, D.B. Keech, and G.A. Taylor Biochem. J. 78 1961 225 236
146. J.R. Quayle, and D.B. Keech Biochem. J. 72 1959 631 637
147. J.R. Postgate Arch. Mikrobiol. 46 1963 287 295
148. M. Jormakka, S. Tornroth, B. Byrne, and S. Iwata Science 295 2002 1863 1868
149. J.C. Boyington, V.N. Gladyshev, S.V. Khangulov, T.C. Stadtman, and P.D. Sun Science 275 1997 1305 1308
150. V.S. Lamzin, Z. Dauter, V.O. Popov, E.H. Harutyunyan, and K.S. Wilson J. Mol. Biol. 236 1992 759 785
151. P.C. Maloney, V. Anantharam, and M.J. Allison J. Biol. Chem. 267 1992 10531 10536
152. Z.-S. Ruan, V. Anantharam, I.T. Crawford, S.V. Ambudkar, S.Y. Rhee, M.J. Allison, and P.C. Maloney J. Biol. Chem. 267 1992 10537 10543
153. K. Abe, Z.-S. Ruan, and P.C. Maloney J. Biol. Chem. 271 1996 6789 6793
154. C.A. Kuhner, P.A. Hartmann, and M.J. Allison Appl. Environ. Microbiol. 62 1996 2494 2500
155. P.C. Maloney Bioessays 14 1992 757 762
156. L. Ye, and P.C. Maloney J. Biol. Chem. 277 2002 20372 20378
157. K. Young-Mog, L. Ye, and P.C. Maloney J. Biol. Chem. 276 2001 36681 36686
158. T. Hirai, J.A.W. Heymann, D. Shi, R. Sarker, P.C. Maloney, and S. Subramaniam Nat. Struct. Biol. 9 2002 597 600
159. I.T. Paulsen, L. Nguyen, M.K. Sliwinski, R. Rabus, and M.H. Saier Jr. J. Mol. Biol. 301 2000 75 100
160. P.J. Henderson, and M.C. Maiden Philos. Trans. R. Soc. Lond. B 326 1990 391 410
161. J. Heider FEBS Lett. 509 2001 345 349
162. C. Leutwein, and J. Heider J. Bacteriol 183 2001 4288 4295
163. T. Eissner, C. Engemann, K. Baumgart, and H.-P. Kleber Biochemistry 40 2001 11140 11148
164. T. Selmer, and W. Buckel J. Biol. Chem. 274 1999 20772 20778
165. P. Dimroth, and H. Eggerer Proc. Natl. Acad. Sci. USA 72 1975 3458 3462
166. P. Dimroth, and H. Eggerer Eur. J. Biochem. 80 1977 479 488
167. S. Jonsson, S. Ricagno, Y. Lindqvist, and N.G.J. Richards J. Biol. Chem. 279 2004 36003 36012
168. W.W. Cleland Adv. Enzymol. Relat. Areas Mol. Biol. 75 1977 273 387
169. S. Doublié Methods Enzymol. 276 1997 523 530
170. S. Ricagno, S. Jonsson, N. Richards, and Y. Lindqvist EMBO J. 22 2003 3210 3219
171. S. Ricagno, S. Jonsson, N. Richards, and Y. Lindqvist Acta Crystallogr. D 59 2003 1276 1277
172. G. Lu J. Appl. Crystallogr. 33 2000 176 183
173. P.A. Buckley, J. Baz Jackson, T. Schneider, S.A. White, D.W. Rice, and P.J. Baker Struct. Fold Des. 8 2000 809 815
174. E. Johansson, J.J. Steffens, Y. Lindqvist, and G. Schneider Struct. Fold Des. 8 2000 1037 1047
175. M.E. Fraser, M.N.G. James, W.A. Bridger, and W.T. Wolodko J. Mol. Biol. 285 1999 1633 1653
176. U. Jacob, M. Mack, T. Clausen, R. Huber, W. Buckel, and A. Messerschmidt Structure 5 1997 415 426
177. R. Vincentelli, C. Bignon, A. Gruez, S. Canaan, G. Sulzenbacher, M. Tegoni, V. Campanacci, and C. Cambillau Acc. Chem. Res. 36 2003 165 172
178. A. Gruez, V. Roig-Zamboni, C. Valencia, V.R. Campanacci, and C. Cambillau J. Biol. Chem. 278 2003 34582 34586
179. A. Gogos, J. Gorman, and L. Shapiro Acta. Crystallogr. D 60 2004 507 511
180. H. White, and W.P. Jencks J. Biol. Chem. 251 1976 1688 1699
181. S.J. Sramek, F.E. Frerman, D.J. McCormick, and G.R. Duncombe Arch. Biochem. Biophys. 181 1977 525 533
182. A.J. Lloyd, and P.M. Shoolingin-Jordan Biochemistry 40 2001 2455 2467
183. J. Stubbe, and W. van der Donk Chem. Rev. 98 1998 705 782
184. S.J. Wodak, and J. Janin Adv. Prot. Chem. 61 2003 9 73