메뉴 건너뛰기




Volumn 9, Issue 1, 2018, Pages

Efficient generation of mouse models of human diseases via ABE- and BE-mediated base editing

Author keywords

[No Author keywords available]

Indexed keywords

AR PROTEIN; CELL PROTEIN; GENOMIC DNA; GUIDE RNA; HOXD13 PROTEIN; MESSENGER RNA; SINGLE GUIDE RNA; UNCLASSIFIED DRUG; ADENINE; ANDROGEN RECEPTOR; AR PROTEIN, MOUSE; GREEN FLUORESCENT PROTEIN; HOMEODOMAIN PROTEIN; HOXD13 PROTEIN, MOUSE; TRANSCRIPTION FACTOR;

EID: 85048705226     PISSN: None     EISSN: 20411723     Source Type: Journal    
DOI: 10.1038/s41467-018-04768-7     Document Type: Article
Times cited : (112)

References (24)
  • 1
    • 85018618268 scopus 로고    scopus 로고
    • Precise base editing in rice, wheat and maize with a Cas9-cytidine deaminase fusion
    • Zong, Y. et al. Precise base editing in rice, wheat and maize with a Cas9-cytidine deaminase fusion. Nat. Biotechnol. 35, 438-440 (2017).
    • (2017) Nat. Biotechnol. , vol.35 , pp. 438-440
    • Zong, Y.1
  • 2
    • 84971006562 scopus 로고    scopus 로고
    • Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage
    • Komor, A. C., Kim, Y. B., Packer, M. S., Zuris, J. A. & Liu, D. R. Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage. Nature 533, 420-424 (2016).
    • (2016) Nature , vol.533 , pp. 420-424
    • Komor, A.C.1    Kim, Y.B.2    Packer, M.S.3    Zuris, J.A.4    Liu, D.R.5
  • 3
    • 85018918215 scopus 로고    scopus 로고
    • Highly efficient RNA-guided base editing in mouse embryos
    • Kim, K. et al. Highly efficient RNA-guided base editing in mouse embryos. Nat. Biotechnol. 35, 435-437 (2017).
    • (2017) Nat. Biotechnol. , vol.35 , pp. 435-437
    • Kim, K.1
  • 4
    • 85018935232 scopus 로고    scopus 로고
    • Genome-wide target specificities of CRISPR RNA-guided programmable deaminases
    • Kim, D. et al. Genome-wide target specificities of CRISPR RNA-guided programmable deaminases. Nat. Biotechnol. 35, 475-480 (2017).
    • (2017) Nat. Biotechnol. , vol.35 , pp. 475-480
    • Kim, D.1
  • 5
    • 84976904305 scopus 로고    scopus 로고
    • ClinVar: Public archive of interpretations of clinically relevant variants
    • Landrum, M. J. et al. ClinVar: public archive of interpretations of clinically relevant variants. Nucleic Acids Res. 44, D862-D868 (2016).
    • (2016) Nucleic Acids Res. , vol.44 , pp. D862-D868
    • Landrum, M.J.1
  • 6
    • 85034861903 scopus 로고    scopus 로고
    • Programmable base editing of AT to GC in genomic DNA without DNA cleavage
    • Gaudelli, N. M. et al. Programmable base editing of AT to GC in genomic DNA without DNA cleavage. Nature 551, 464-471 (2017).
    • (2017) Nature , vol.551 , pp. 464-471
    • Gaudelli, N.M.1
  • 7
    • 84900320600 scopus 로고    scopus 로고
    • Mutations in the homeodomain of HOXD13 cause syndactyly type 1-c in two Chinese families
    • Dai, L. et al. Mutations in the homeodomain of HOXD13 cause syndactyly type 1-c in two Chinese families. PLoS ONE 9, e96192 (2014).
    • (2014) PLoS ONE , vol.9
    • Dai, L.1
  • 8
    • 0030864804 scopus 로고    scopus 로고
    • Androgen receptor point mutations as the underlying molecular defect in 2 patients with androgen insensitivity syndrome
    • Radmayr, C. et al. Androgen receptor point mutations as the underlying molecular defect in 2 patients with androgen insensitivity syndrome. J. Urol. 158, 1553-1556 (1997).
    • (1997) J. Urol. , vol.158 , pp. 1553-1556
    • Radmayr, C.1
  • 9
    • 84920394601 scopus 로고    scopus 로고
    • T Androgen receptor: Structure, role in prostate cancer and drug discovery
    • Tan, M. H. E., Li, J., Xu, H. E., Melcher, K. & Yong, E. T Androgen receptor: structure, role in prostate cancer and drug discovery. Acta Pharmacol. Sin. 36, 3 (2014).
    • (2014) Acta Pharmacol. Sin. , vol.36 , pp. 3
    • Tan, M.H.E.1    Li, J.2    Xu, H.E.3    Melcher, K.4    Yong, E.5
  • 10
    • 0037108766 scopus 로고    scopus 로고
    • Generation and characterization of androgen receptor knockout (ARKO) mice: An in vivo model for the study of androgen functions in selective tissues
    • Yeh, S. Y. et al. Generation and characterization of androgen receptor knockout (ARKO) mice: An in vivo model for the study of androgen functions in selective tissues. Proc. Natl. Acad. Sci. USA 99, 15245-15245 (2002).
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 15245
    • Yeh, S.Y.1
  • 11
    • 12844274300 scopus 로고    scopus 로고
    • Mutation of the androgen receptor causes oncogenic transformation of the prostate
    • Han, G. Z. et al. Mutation of the androgen receptor causes oncogenic transformation of the prostate. Proc. Natl. Acad. Sci. USA 102, 1151-1156 (2005).
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 1151-1156
    • Han, G.Z.1
  • 12
    • 33846641577 scopus 로고    scopus 로고
    • Mutations in HOXD13 underlie syndactyly type v and a novel brachydactyly-syndactyly syndrome
    • Zhao, X. et al. Mutations in HOXD13 underlie syndactyly type V and a novel brachydactyly-syndactyly syndrome. Am. J. Hum. Genet. 80, 361-371 (2007).
    • (2007) Am. J. Hum. Genet. , vol.80 , pp. 361-371
    • Zhao, X.1
  • 13
    • 84890486930 scopus 로고    scopus 로고
    • Distinct global shifts in genomic binding profiles of limb malformation-associated HOXD13 mutations
    • Ibrahim, D. M. et al. Distinct global shifts in genomic binding profiles of limb malformation-associated HOXD13 mutations. Genome Res. 23, 2091-2102 (2013).
    • (2013) Genome Res. , vol.23 , pp. 2091-2102
    • Ibrahim, D.M.1
  • 14
    • 59749094454 scopus 로고    scopus 로고
    • Update ofmutations in the genes encoding the pancreatic beta-cell K(ATP) channel subunits Kir6. 2 (KCNJ11) and sulfonylurea receptor 1 (ABCC8) in diabetes mellitus and hyperinsulinism
    • Flanagan, S. E. et al. Update ofmutations in the genes encoding the pancreatic beta-cell K(ATP) channel subunits Kir6. 2 (KCNJ11) and sulfonylurea receptor 1 (ABCC8) in diabetes mellitus and hyperinsulinism. Hum. Mutat. 30, 170-180 (2009).
    • (2009) Hum. Mutat. , vol.30 , pp. 170-180
    • Flanagan, S.E.1
  • 15
    • 0030069658 scopus 로고    scopus 로고
    • A mutation in the gene encoding the a2 chain of the fibril-associated collagen IX, COL9A2, causes multiple epiphyseal dysplasia (EDM2)
    • Muragaki, Y. et al. A mutation in the gene encoding the a2 chain of the fibril-associated collagen IX, COL9A2, causes multiple epiphyseal dysplasia (EDM2). Nat. Genet. 12, 103 (1996).
    • (1996) Nat. Genet. , vol.12 , pp. 103
    • Muragaki, Y.1
  • 16
    • 85017397628 scopus 로고    scopus 로고
    • Increasing the genome-targeting scope and precision of base editing with engineered Cas9-cytidine deaminase fusions
    • Kim, Y. B. et al. Increasing the genome-targeting scope and precision of base editing with engineered Cas9-cytidine deaminase fusions. Nat. Biotechnol. 35, 371-376 (2017).
    • (2017) Nat. Biotechnol. , vol.35 , pp. 371-376
    • Kim, Y.B.1
  • 17
    • 84949791988 scopus 로고    scopus 로고
    • Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition
    • Kleinstiver, B. P. et al. Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition. Nat. Biotechnol. 33, 1293-1298 (2015).
    • (2015) Nat. Biotechnol. , vol.33 , pp. 1293-1298
    • Kleinstiver, B.P.1
  • 18
    • 84905732049 scopus 로고    scopus 로고
    • Somatic mosaicism and allele complexity induced by CRISPR/ Cas9 RNA injections in mouse zygotes
    • Yen, S. T. et al. Somatic mosaicism and allele complexity induced by CRISPR/ Cas9 RNA injections in mouse zygotes. Dev. Biol. 393, 3-9 (2014).
    • (2014) Dev. Biol. , vol.393 , pp. 3-9
    • Yen, S.T.1
  • 19
    • 85021819967 scopus 로고    scopus 로고
    • One-step generation of complete gene knockout mice and monkeys by CRISPR/Cas9-mediated gene editing with multiple sgRNAs
    • Zuo, E. et al. One-step generation of complete gene knockout mice and monkeys by CRISPR/Cas9-mediated gene editing with multiple sgRNAs. Cell Res. 27, 933-945 (2017).
    • (2017) Cell Res. , vol.27 , pp. 933-945
    • Zuo, E.1
  • 20
    • 84896308706 scopus 로고    scopus 로고
    • Cas-OFFinder: A fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases
    • Bae, S., Park, J. & Kim, J. S. Cas-OFFinder: a fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases. Bioinformatics 30, 1473-1475 (2014).
    • (2014) Bioinformatics , vol.30 , pp. 1473-1475
    • Bae, S.1    Park, J.2    Kim, J.S.3
  • 21
    • 84875634162 scopus 로고    scopus 로고
    • Integrative Genomics Viewer (IGV): High-performance genomics data visualization and exploration
    • Thorvaldsdottir, H., Robinson, J. T. & Mesirov, J. P. Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration. Brief Bioinformatics 14, 178-192 (2013).
    • (2013) Brief Bioinformatics , vol.14 , pp. 178-192
    • Thorvaldsdottir, H.1    Robinson, J.T.2    Mesirov, J.P.3
  • 22
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li, H. & Durbin, R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25, 1754-1760 (2009).
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 23
    • 80054915847 scopus 로고    scopus 로고
    • A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
    • Li, H. A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data. Bioinformatics 27, 2987-2993 (2011).
    • (2011) Bioinformatics , vol.27 , pp. 2987-2993
    • Li, H.1
  • 24
    • 84976448371 scopus 로고    scopus 로고
    • VarDict: A novel and versatile variant caller for next-generation sequencing in cancer research
    • Lai, Z. et al. VarDict: a novel and versatile variant caller for next-generation sequencing in cancer research. Nucleic Acids Res. 44, e108 (2016).
    • (2016) Nucleic Acids Res. , vol.44 , pp. e108
    • Lai, Z.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.