-
1
-
-
84867043272
-
Global distribution of microbial abundance and biomass in subseafloor sediment
-
Kallmeyer J, Pockalny R, Adhikari RR, Smith DC, D'Hondt S: Global distribution of microbial abundance and biomass in subseafloor sediment. Proc Natl Acad Sci 2012, 109: 16213-16216.
-
(2012)
Proc Natl Acad Sci
, vol.109
, pp. 16213-16216
-
-
Kallmeyer, J.1
Pockalny, R.2
Adhikari, R.R.3
Smith, D.C.4
D'Hondt, S.5
-
2
-
-
70350261490
-
What is microbial community ecology?
-
Konopka A: What is microbial community ecology? ISME J 2009, 3:1223-1230.
-
(2009)
ISME J
, vol.3
, pp. 1223-1230
-
-
Konopka, A.1
-
3
-
-
85018356716
-
The ecology of acidophilic microorganisms in the corroding concrete sewer environment
-
Li X, Jiang G, Kappler U, Bond P: The ecology of acidophilic microorganisms in the corroding concrete sewer environment. Front Microbiol 2017, 8:683.
-
(2017)
Front Microbiol
, vol.8
, pp. 683
-
-
Li, X.1
Jiang, G.2
Kappler, U.3
Bond, P.4
-
4
-
-
85044555332
-
A human gut microbial gene catalogue established by metagenomic sequencing
-
Qin J, Li R, Raes J, Arumugam M, Burgdorf KS, Manichanh C, Nielsen T, Pons N, Levenez F, Yamada T, et al.: A human gut microbial gene catalogue established by metagenomic sequencing. Inflamm Bowel Dis Monit 2010, 11:28.
-
(2010)
Inflamm Bowel Dis Monit
, vol.11
, pp. 28
-
-
Qin, J.1
Li, R.2
Raes, J.3
Arumugam, M.4
Burgdorf, K.S.5
Manichanh, C.6
Nielsen, T.7
Pons, N.8
Levenez, F.9
Yamada, T.10
-
5
-
-
34547800097
-
Pyrosequencing enumerates and contracts soil microbial diversity
-
Roesch LFW, Fulthorpe RR, Riva A, Casella G, Km A, Kent AD, Daroub SH, Camargo FAO, Farmerie WG, Triplett EW: Pyrosequencing enumerates and contracts soil microbial diversity. ISME J 2007, 1:283-290.
-
(2007)
ISME J
, vol.1
, pp. 283-290
-
-
Roesch, L.F.W.1
Fulthorpe, R.R.2
Riva, A.3
Casella, G.4
Km, A.5
Kent, A.D.6
Daroub, S.H.7
Camargo, F.A.O.8
Farmerie, W.G.9
Triplett, E.W.10
-
6
-
-
85010661883
-
Nitrogen fixing bacterial diversity in a tropical estuarine sediments
-
Thajudeen J, Yousuf J, Veetil VP, Varghese S, Singh A, AbdullaMH: Nitrogen fixing bacterial diversity in a tropical estuarine sediments. World J Microbiol Biotechnol 2017, 33:1-11.
-
(2017)
World J Microbiol Biotechnol
, vol.33
, pp. 1-11
-
-
Thajudeen, J.1
Yousuf, J.2
Veetil, V.P.3
Varghese, S.4
Singh, A.5
Abdulla, M.H.6
-
7
-
-
84966658387
-
Microbial regulation of the soil carbon cycle: evidence from gene -enzyme relationships
-
Trivedi P, Delgado-baquerizo M, Trivedi C, Hu H: Microbial regulation of the soil carbon cycle: evidence from gene -enzyme relationships. ISME J 2016, 10:2593-2604, http:// dx.doi.org/10.1038/ismej.2016.65.
-
(2016)
ISME J
, vol.10
, pp. 2593-2604
-
-
Trivedi, P.1
Delgado-baquerizo, M.2
Trivedi, C.3
Hu, H.4
-
8
-
-
84939818228
-
Experimental insights into the importance of aquatic bacterial community composition to the degradation of dissolved organic matter
-
Logue JB, Stedmon CA, Kellerman AM, Nielsen NJ, Andersson AF, Laudon H, Lindström ES, Kritzberg ES: Experimental insights into the importance of aquatic bacterial community composition to the degradation of dissolved organic matter. ISME J 2016, 10:533-545, http://dx.doi.org/ 10.1038/ismej.2015.131.
-
(2016)
ISME J
, vol.10
, pp. 533-545
-
-
Logue, J.B.1
Stedmon, C.A.2
Kellerman, A.M.3
Nielsen, N.J.4
Andersson, A.F.5
Laudon, H.6
Lindström, E.S.7
Kritzberg, E.S.8
-
9
-
-
84989325797
-
Current state of knowledge in microbial degradation of polycyclic aromatic hydrocarbons (PAHs): a review
-
Ghosal D, Ghosh S, Dutta TK, Ahn Y: Current state of knowledge in microbial degradation of polycyclic aromatic hydrocarbons (PAHs): a review. Front Microbiol 2016, 7.
-
(2016)
Front Microbiol
, vol.7
-
-
Ghosal, D.1
Ghosh, S.2
Dutta, T.K.3
Ahn, Y.4
-
10
-
-
84950291119
-
Functional overlap of the Arabidopsis leaf and root microbiota
-
Bai Y, Müller DB, Srinivas G, Garrido-Oter R, Potthoff E, Rott M, Dombrowski N, Münch PC, Spaepen S, Remus-Emsermann M, et al.: Functional overlap of the Arabidopsis leaf and root microbiota. Nature 2015, 528:364-369.
-
(2015)
Nature
, vol.528
, pp. 364-369
-
-
Bai, Y.1
Müller, D.B.2
Srinivas, G.3
Garrido-Oter, R.4
Potthoff, E.5
Rott, M.6
Dombrowski, N.7
Münch, P.C.8
Spaepen, S.9
Remus-Emsermann, M.10
-
11
-
-
84940093005
-
Metabolic footprint of epiphytic bacteria on Arabidopsis thaliana leaves
-
Ryffel F, Helfrich EJ, Kiefer P, Peyriga L, Portais J, Piel J, Vorholt JA: Metabolic footprint of epiphytic bacteria on Arabidopsis thaliana leaves. ISME J 2015, http://dx.doi.org/ 10.1038/ismej.2015.141.
-
(2015)
ISME J
-
-
Ryffel, F.1
Helfrich, E.J.2
Kiefer, P.3
Peyriga, L.4
Portais, J.5
Piel, J.6
Vorholt, J.A.7
-
12
-
-
85010931720
-
High-fiber diet and acetate supplementation development of hypertension and heart failure in hypertensive mice
-
Marques FZ, Nelson E, Chu P-Y, Horlock D, Fiedler A, Ziemann M, Tan TK, Kuruppu S, Rajapak NW, El-Osta A, et al.: High-fiber diet and acetate supplementation development of hypertension and heart failure in hypertensive mice. Circulation 2017, 135:964-977, http://dx.doi.org/10.1161/ CIRCULATIONAHA.116.024545.
-
(2017)
Circulation
, vol.135
, pp. 964-977
-
-
Marques, F.Z.1
Nelson, E.2
Chu, P-Y.3
Horlock, D.4
Fiedler, A.5
Ziemann, M.6
Tan, T.K.7
Kuruppu, S.8
Rajapak, N.W.9
El-Osta, A.10
-
13
-
-
84934987107
-
Evidence that asthma is a developmental origin disease influenced by maternal diet and bacterial metabolites
-
Thorburn AN, Mckenzie CI, Shen S, Stanley D, Macia L, Mason LJ, Roberts LK, Wong CHY, Shim R, Robert R, et al.: Evidence that asthma is a developmental origin disease influenced by maternal diet and bacterial metabolites. Nat Commun 2015, 6:7320, http://dx.doi.org/10.1038/ ncomms8320.
-
(2015)
Nat Commun
, vol.6
, pp. 7320
-
-
Thorburn, A.N.1
Mckenzie, C.I.2
Shen, S.3
Stanley, D.4
Macia, L.5
Mason, L.J.6
Roberts, L.K.7
Wong, C.H.Y.8
Shim, R.9
Robert, R.10
-
14
-
-
84942337509
-
Exometabolite niche partitioning among sympatric soil bacteria
-
Baran R, Brodie EL, Mayberry-Lewis J, Hummel E, Da Rocha UN, Chakraborty R, Bowen BP, Karaoz U, Cadillo-Quiroz H, Garcia-Pichel F, et al.: Exometabolite niche partitioning among sympatric soil bacteria. Nat Commun 2015, 6:8289.
-
(2015)
Nat Commun
, vol.6
, pp. 8289
-
-
Baran, R.1
Brodie, E.L.2
Mayberry-Lewis, J.3
Hummel, E.4
Da Rocha, U.N.5
Chakraborty, R.6
Bowen, B.P.7
Karaoz, U.8
Cadillo-Quiroz, H.9
Garcia-Pichel, F.10
-
15
-
-
84929440325
-
Metabolic dependencies drive species cooccurrence in diverse microbial communities
-
Zelezniak A, Andrejev S, Ponomarova O, Mende DR, Bork P, Patil KR: Metabolic dependencies drive species cooccurrence in diverse microbial communities. Proc Natl Acad Sci 2015, 112:201421834.
-
(2015)
Proc Natl Acad Sci
, vol.112
, pp. 201421834
-
-
Zelezniak, A.1
Andrejev, S.2
Ponomarova, O.3
Mende, D.R.4
Bork, P.5
Patil, K.R.6
-
16
-
-
84903741051
-
Niche engineering demonstrates a latent capacity for fungal-algal mutualism
-
Hom EFY, Murray AW: Niche engineering demonstrates a latent capacity for fungal-algal mutualism. Science 2014, 345:94-98.
-
(2014)
Science
, vol.345
, pp. 94-98
-
-
Hom, E.F.Y.1
Murray, A.W.2
-
17
-
-
84455174807
-
Competitive and cooperative metabolic interactions in bacterial communities
-
Freilich S, Zarecki R, Eilam O, Segal ES, Henry CS, Kupiec M, Gophna U, Sharan R, Ruppin E, Sharan R, et al.: Competitive and cooperative metabolic interactions in bacterial communities. Nat Commun 2011, 2:589.
-
(2011)
Nat Commun
, vol.2
, pp. 589
-
-
Freilich, S.1
Zarecki, R.2
Eilam, O.3
Segal, E.S.4
Henry, C.S.5
Kupiec, M.6
Gophna, U.7
Sharan, R.8
Ruppin, E.9
Sharan, R.10
-
18
-
-
85030158230
-
Yeast creates a niche for symbiotic lactic acid bacteria through nitrogen overflow
-
Ponomarova O, Gabrielli N, Sévin DC, Mülleder M, Zirngibl K, Bulyha K, Andrejev S, Kafkia E, Typas A, Sauer U: Yeast creates a niche for symbiotic lactic acid bacteria through nitrogen overflow. Cell Systems 2017, http://dx.doi.org/10.1016/ j.cels.2017.09.002.
-
(2017)
Cell Systems
-
-
Ponomarova, O.1
Gabrielli, N.2
Sévin, D.C.3
Mülleder, M.4
Zirngibl, K.5
Bulyha, K.6
Andrejev, S.7
Kafkia, E.8
Typas, A.9
Sauer, U.10
-
19
-
-
84867746452
-
Metabolic specialization and the assembly of microbial communities
-
Johnson DR, Goldschmidt F, Lilja EE, Ackermann M: Metabolic specialization and the assembly of microbial communities. ISME J 2012, 6:1985-1991.
-
(2012)
ISME J
, vol.6
, pp. 1985-1991
-
-
Johnson, D.R.1
Goldschmidt, F.2
Lilja, E.E.3
Ackermann, M.4
-
20
-
-
84861212982
-
Working together for the common good: cell-cell communication in bacteria
-
Stevens AM, Schuster M, Rumbaugh KP: Working together for the common good: cell-cell communication in bacteria. J Bacteriol 2012, 194:2131-2141.
-
(2012)
J Bacteriol
, vol.194
, pp. 2131-2141
-
-
Stevens, A.M.1
Schuster, M.2
Rumbaugh, K.P.3
-
21
-
-
84939233322
-
Metabolic interactions in microbial communities: untangling the Gordian knot
-
Ponomarova O, Patil KR: Metabolic interactions in microbial communities: untangling the Gordian knot. Curr Opin Microbiol 2015, 27:37-44.
-
(2015)
Curr Opin Microbiol
, vol.27
, pp. 37-44
-
-
Ponomarova, O.1
Patil, K.R.2
-
22
-
-
27944442272
-
Quorum sensing: cell-to-cell communication in bacteria
-
Waters CM, Bassler BL: Quorum sensing: cell-to-cell communication in bacteria. Annu Rev Cell Dev Biol 2005, 21: 319-346.
-
(2005)
Annu Rev Cell Dev Biol
, vol.21
, pp. 319-346
-
-
Waters, C.M.1
Bassler, B.L.2
-
23
-
-
0035158661
-
Shigella flexneri LuxS quorum-sensing system modulates virB expression but is not essential for virulence
-
Day WAJ, Maurelli AT: Shigella flexneri LuxS quorum-sensing system modulates virB expression but is not essential for virulence. Infect Immun 2001, 69:15-23.
-
(2001)
Infect Immun
, vol.69
, pp. 15-23
-
-
Day, W.A.J.1
Maurelli, A.T.2
-
24
-
-
84979583990
-
Spatial structure, cooperation and competition in biofilms
-
Nadell CD, Drescher K, Foster KR: Spatial structure, cooperation and competition in biofilms. Nat Publ Gr 2016, 14: 589-600.
-
(2016)
Nat Publ Gr
, vol.14
, pp. 589-600
-
-
Nadell, C.D.1
Drescher, K.2
Foster, K.R.3
-
25
-
-
84923340856
-
Metabolic cross-feeding via intercellular nanotubes among bacteria
-
Pande S, Shitut S, Freund L, Westermann M, Bertels F, Colesie C, Bischofs IB, Kost C: Metabolic cross-feeding via intercellular nanotubes among bacteria. Nat Commun 2015, 6: 6238.
-
(2015)
Nat Commun
, vol.6
, pp. 6238
-
-
Pande, S.1
Shitut, S.2
Freund, L.3
Westermann, M.4
Bertels, F.5
Colesie, C.6
Bischofs, I.B.7
Kost, C.8
-
26
-
-
84862639570
-
The interconnection between biofilm formation and horizontal gene transfer
-
Madsen JS, Burmølle M, Hansen LH, Sørensen SJ: The interconnection between biofilm formation and horizontal gene transfer. FEMS Immunol Med Microbiol 2012, 65:183-195.
-
(2012)
FEMS Immunol Med Microbiol
, vol.65
, pp. 183-195
-
-
Madsen, J.S.1
Burmølle, M.2
Hansen, L.H.3
Sørensen, S.J.4
-
27
-
-
85028139411
-
Synthetic microbial ecosystems: an exciting tool to understand and apply microbial communities
-
De Roy K, Marzorati M, Van den Abbeele P, Van de Wiele T, Boon N: Synthetic microbial ecosystems: an exciting tool to understand and apply microbial communities. Environ Microbiol 2014, 16:1472-1481.
-
(2014)
Environ Microbiol
, vol.16
, pp. 1472-1481
-
-
De Roy, K.1
Marzorati, M.2
Van den Abbeele, P.3
Van de Wiele, T.4
Boon, N.5
-
28
-
-
85010430868
-
All together now: experimental multispecies biofilm model systems
-
Tan CH, Lee KWK, Burmølle M, Kjelleberg S, Rice SA: All together now: experimental multispecies biofilm model systems. Environ Microbiol 2017, 19:42-53.
-
(2017)
Environ Microbiol
, vol.19
, pp. 42-53
-
-
Tan, C.H.1
Lee, K.W.K.2
Burmølle, M.3
Kjelleberg, S.4
Rice, S.A.5
-
29
-
-
84926433439
-
Fermented foods as experimentally tractable microbial ecosystems
-
Wolfe BE, Dutton RJ: Fermented foods as experimentally tractable microbial ecosystems. Cell 2015, 161:49-55.
-
(2015)
Cell
, vol.161
, pp. 49-55
-
-
Wolfe, B.E.1
Dutton, R.J.2
-
30
-
-
78650601515
-
Multiple syntrophic interactions in a terephthalatedegrading methanogenic consortium
-
Lykidis A, Chen C-L, Tringe SG, McHardy AC, Copeland A, Kyrpides NC, Hugenholtz P, Macarie H, Olmos A, Monroy O, et al.: Multiple syntrophic interactions in a terephthalatedegrading methanogenic consortium. ISME J 2011, 5: 122-130.
-
(2011)
ISME J
, vol.5
, pp. 122-130
-
-
Lykidis, A.1
Chen, C-L.2
Tringe, S.G.3
McHardy, A.C.4
Copeland, A.5
Kyrpides, N.C.6
Hugenholtz, P.7
Macarie, H.8
Olmos, A.9
Monroy, O.10
-
31
-
-
84899413958
-
Single-cell genome and metatranscriptome sequencing reveal metabolic interactions of an alkane-degrading methanogenic community
-
Embree M, Nagarajan H, Movahedi N, Chitsaz H, Zengler K: Single-cell genome and metatranscriptome sequencing reveal metabolic interactions of an alkane-degrading methanogenic community. ISME J 2014, 8:757-767.
-
(2014)
ISME J
, vol.8
, pp. 757-767
-
-
Embree, M.1
Nagarajan, H.2
Movahedi, N.3
Chitsaz, H.4
Zengler, K.5
-
32
-
-
84969504890
-
Human microbiota-associated mice: a model with challenges
-
Arrieta MC, Walter J, Finlay BB: Human microbiota-associated mice: a model with challenges. Cell Host Microbe 2016, 19: 575-578.
-
(2016)
Cell Host Microbe
, vol.19
, pp. 575-578
-
-
Arrieta, M.C.1
Walter, J.2
Finlay, B.B.3
-
33
-
-
84956661593
-
Incorporating the gut microbiota into models of human and non-human primate ecology and evolution
-
Amato KR: Incorporating the gut microbiota into models of human and non-human primate ecology and evolution. Am J Phys Anthropol 2016, 159:S196-S215.
-
(2016)
Am J Phys Anthropol
, vol.159
, pp. S196-S215
-
-
Amato, K.R.1
-
34
-
-
0018820263
-
Microbial secondary metabolism
-
Malik VS: Microbial secondary metabolism. Trends Biochem Sci 1980, 5:68-72.
-
(1980)
Trends Biochem Sci
, vol.5
, pp. 68-72
-
-
Malik, V.S.1
-
35
-
-
84962491989
-
Studying bacterial multispecies biofilms: where to start?
-
Røder HL, Sørensen SJ, Burmølle M: Studying bacterial multispecies biofilms: where to start? Trends Microbiol 2016, 24:503-513.
-
(2016)
Trends Microbiol
, vol.24
, pp. 503-513
-
-
Røder, H.L.1
Sørensen, S.J.2
Burmølle, M.3
-
37
-
-
84986005229
-
Cell-to-cell heterogeneity emerges as consequence of metabolic cooperation in a synthetic yeast community
-
Campbell K, Vowinckel J, Ralser M: Cell-to-cell heterogeneity emerges as consequence of metabolic cooperation in a synthetic yeast community. Biotechnol J. 2016, 11:1169-1178, http://dx.doi.org/10.1002/biot.201500301.
-
(2016)
Biotechnol J.
, vol.11
, pp. 1169-1178
-
-
Campbell, K.1
Vowinckel, J.2
Ralser, M.3
-
38
-
-
84907741816
-
Adaptive evolution of synthetic cooperating communities improves growth performance
-
Zhang X, Reed JL: Adaptive evolution of synthetic cooperating communities improves growth performance. PLoS One 2014:9.
-
(2014)
PLoS One
, vol.9
-
-
Zhang, X.1
Reed, J.L.2
-
39
-
-
84901049717
-
Syntrophic exchange in synthetic microbial communities
-
Mee MT, Collins JJ, Church GM, Wang HH: Syntrophic exchange in synthetic microbial communities. Proc Natl Acad Sci U S A 2014, 111:E2149-E2156.
-
(2014)
Proc Natl Acad Sci U S A
, vol.111
, pp. E2149-E2156
-
-
Mee, M.T.1
Collins, J.J.2
Church, G.M.3
Wang, H.H.4
-
40
-
-
79951705599
-
Intercellular nanotubes mediate bacterial communication
-
Dubey GP, Ben-Yehuda S: Intercellular nanotubes mediate bacterial communication. Cell 2011, 144:590-600.
-
(2011)
Cell
, vol.144
, pp. 590-600
-
-
Dubey, G.P.1
Ben-Yehuda, S.2
-
41
-
-
0036254810
-
Metabolic commensalism and competition in a two-species microbial consortium
-
Christensen BB, Haagensen JAJ, Heydorn A, Molin S: Metabolic commensalism and competition in a two-species microbial consortium. Appl Environ Microbiol 2002, 68:2495-2502.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 2495-2502
-
-
Christensen, B.B.1
Haagensen, J.A.J.2
Heydorn, A.3
Molin, S.4
-
42
-
-
84932157892
-
Coculture of Staphylococcus aureus with Pseudomonas aeruginosa drives S
-
Filkins LM, Graber JA, Olson DG, Dolben EL, Lynd LR, Bhuju S, O'Toole GA: Coculture of Staphylococcus aureus with Pseudomonas aeruginosa drives S. aureus towards fermentative metabolism and reduced viability in a cystic fibrosis model. J Bacteriol 2015, 197:2252-2264.
-
(2015)
aureus towards fermentative metabolism and reduced viability in a cystic fibrosis model. J Bacteriol
, vol.197
, pp. 2252-2264
-
-
Filkins, L.M.1
Graber, J.A.2
Olson, D.G.3
Dolben, E.L.4
Lynd, L.R.5
Bhuju, S.6
O'Toole, G.A.7
-
43
-
-
77956415336
-
Emergent cooperation in microbial metabolism
-
Wintermute EH, Silver PA: Emergent cooperation in microbial metabolism. Mol Syst Biol 2010, 6:407.
-
(2010)
Mol Syst Biol
, vol.6
, pp. 407
-
-
Wintermute, E.H.1
Silver, P.A.2
-
44
-
-
84927693444
-
High prevalence of biofilm synergy among bacterial soil isolates in cocultures indicates bacterial interspecific cooperation
-
Ren D, Madsen JS, Sørensen SJ, Burmølle M: High prevalence of biofilm synergy among bacterial soil isolates in cocultures indicates bacterial interspecific cooperation. ISME J 2015, 9: 81-89.
-
(2015)
ISME J
, vol.9
, pp. 81-89
-
-
Ren, D.1
Madsen, J.S.2
Sørensen, S.J.3
Burmølle, M.4
-
46
-
-
84907841705
-
Synthetic microbial consortia: from systematic analysis to construction and applications
-
Song H, Ding M-Z, Jia X-Q, Ma Q, Yuan Y-J: Synthetic microbial consortia: from systematic analysis to construction and applications. Chem Soc Rev Chem Soc Rev 2014, 6954: 6954-6981.
-
(2014)
Chem Soc Rev Chem Soc Rev
, vol.6954
, pp. 6954-6981
-
-
Song, H.1
Ding, M-Z.2
Jia, X-Q.3
Ma, Q.4
Yuan, Y-J.5
-
47
-
-
84978468545
-
Exometabolomics assisted design and validation of synthetic obligate mutualism
-
Kosina SM, Danielewicz MA, Mohammed M, Ray J, Suh Y, Yilmaz S, Singh AK, Arkin AP, Deutschbauer AM, Northen TR: Exometabolomics assisted design and validation of synthetic obligate mutualism. ACS Synth Biol 2016, 5:569-576.
-
(2016)
ACS Synth Biol
, vol.5
, pp. 569-576
-
-
Kosina, S.M.1
Danielewicz, M.A.2
Mohammed, M.3
Ray, J.4
Suh, Y.5
Yilmaz, S.6
Singh, A.K.7
Arkin, A.P.8
Deutschbauer, A.M.9
Northen, T.R.10
-
48
-
-
84919933276
-
Comparative analysis of microbial community of novel lactic acid fermentation inoculated with different undefined mixed cultures
-
Liang S, Gliniewicz K, Mendes-Soares H, Settles ML, Forney LJ, Coats ER, McDonald AG: Comparative analysis of microbial community of novel lactic acid fermentation inoculated with different undefined mixed cultures. Bioresour Technol 2015, 179:268-274.
-
(2015)
Bioresour Technol
, vol.179
, pp. 268-274
-
-
Liang, S.1
Gliniewicz, K.2
Mendes-Soares, H.3
Settles, M.L.4
Forney, L.J.5
Coats, E.R.6
McDonald, A.G.7
-
49
-
-
84976351728
-
Bioengineering microbial communities: their potential to help, hinder and disgust
-
Sivasubramaniam D, Franks AE: Bioengineering microbial communities: their potential to help, hinder and disgust. Bioengineered 2016, 7:137-144.
-
(2016)
Bioengineered
, vol.7
, pp. 137-144
-
-
Sivasubramaniam, D.1
Franks, A.E.2
-
50
-
-
84879016225
-
Bioremediation: a genuine technology to remediate radionuclides from the environment
-
Prakash D, Gabani P, Chandel AK, Ronen Z, Singh OV: Bioremediation: a genuine technology to remediate radionuclides from the environment. Microb Biotechnol 2013, 6:349-360.
-
(2013)
Microb Biotechnol
, vol.6
, pp. 349-360
-
-
Prakash, D.1
Gabani, P.2
Chandel, A.K.3
Ronen, Z.4
Singh, O.V.5
-
51
-
-
84945152395
-
The simulator of the human intestinal microbial ecosystem (SHIME®)
-
Van de Wiele T, Van den Abbeele P, Ossieur W, Possemiers S, Marzorati M: The simulator of the human intestinal microbial ecosystem (SHIME®). Impact Food Bioact Heal Vitr Ex Vivo Model 2015, http://dx.doi.org/10.1007/978-3-319-16104-4.
-
(2015)
Impact Food Bioact Heal Vitr Ex Vivo Model
-
-
Van de Wiele, T.1
Van den Abbeele, P.2
Ossieur, W.3
Possemiers, S.4
Marzorati, M.5
-
52
-
-
78149380589
-
A human gastric simulator (HGS) to study food digestion in human stomach
-
Kong F, Singh RP: A human gastric simulator (HGS) to study food digestion in human stomach. J Food Sci 2010:75.
-
(2010)
J Food Sci
, vol.75
-
-
Kong, F.1
Singh, R.P.2
-
53
-
-
83655197770
-
Incorporating a mucosal environment in a dynamic gut model results in a more representative colonization by lactobacilli
-
Van den Abbeele P, Roos S, Eeckhaut V, Mackenzie DA, Derde M, Verstraete W, Marzorati M, Possemiers S, Vanhoecke B, Van Immerseel F, et al.: Incorporating a mucosal environment in a dynamic gut model results in a more representative colonization by lactobacilli. Microb Biotechnol 2012, 5:106-115.
-
(2012)
Microb Biotechnol
, vol.5
, pp. 106-115
-
-
Van den Abbeele, P.1
Roos, S.2
Eeckhaut, V.3
Mackenzie, D.A.4
Derde, M.5
Verstraete, W.6
Marzorati, M.7
Possemiers, S.8
Vanhoecke, B.9
Van Immerseel, F.10
-
54
-
-
84942874856
-
Early infancy microbial and metabolic alterations affect risk of childhood asthma
-
152-307
-
Arrieta M-C, Stiemsma LT, Dimitriu PA, Thorson L, Russell S, Yurist-Doutsch S, Kuzeljevic B, Gold MJ, Britton HM, Lefebvre DL, et al.: Early infancy microbial and metabolic alterations affect risk of childhood asthma. Sci Transl Med 2015, 7:307ra152.
-
(2015)
Sci Transl Med
, vol.7
-
-
Arrieta, M-C.1
Stiemsma, L.T.2
Dimitriu, P.A.3
Thorson, L.4
Russell, S.5
Yurist-Doutsch, S.6
Kuzeljevic, B.7
Gold, M.J.8
Britton, H.M.9
Lefebvre, D.L.10
-
55
-
-
84904578387
-
Cheese rind communities provide tractable systems for in situ and in vitro studies of microbial diversity
-
Wolfe BE, Button JE, Santarelli M, Dutton RJ: Cheese rind communities provide tractable systems for in situ and in vitro studies of microbial diversity. Cell 2014, 158:422-433.
-
(2014)
Cell
, vol.158
, pp. 422-433
-
-
Wolfe, B.E.1
Button, J.E.2
Santarelli, M.3
Dutton, R.J.4
-
56
-
-
70349246812
-
Identification of lactic acid bacteria isolated from Tarhana, a traditional Turkish fermented food
-
Sengun IY, Nielsen DS, Karapinar M, Jakobsen M: Identification of lactic acid bacteria isolated from Tarhana, a traditional Turkish fermented food. Int J Food Microbiol 2009, 135: 105-111.
-
(2009)
Int J Food Microbiol
, vol.135
, pp. 105-111
-
-
Sengun, I.Y.1
Nielsen, D.S.2
Karapinar, M.3
Jakobsen, M.4
-
57
-
-
84973449038
-
The microbiota and health promoting characteristics of the fermented beverage kefir
-
Bourrie BCT, Willing BP, Cotter PD: The microbiota and health promoting characteristics of the fermented beverage kefir. Front Microbiol 2016, 7:1-17.
-
(2016)
Front Microbiol
, vol.7
, pp. 1-17
-
-
Bourrie, B.C.T.1
Willing, B.P.2
Cotter, P.D.3
-
58
-
-
84870266477
-
The evolution of mutualism in gut microbiota via host epithelial selection
-
Schluter J, Foster KR: The evolution of mutualism in gut microbiota via host epithelial selection. PLoS Biol 2012:10.
-
(2012)
PLoS Biol
, vol.10
-
-
Schluter, J.1
Foster, K.R.2
-
59
-
-
84878699293
-
The role of gut microbiota in the pathogenesis of colorectal cancer
-
Zhu Q, Gao R, Wu W, Qin H: The role of gut microbiota in the pathogenesis of colorectal cancer. Tumor Biol 2013, 34: 1285-1300.
-
(2013)
Tumor Biol
, vol.34
, pp. 1285-1300
-
-
Zhu, Q.1
Gao, R.2
Wu, W.3
Qin, H.4
-
61
-
-
84978886843
-
Long-term field study of microbial community and dechlorinating activity following carboxymethyl cellulose-stabilized nanoscale zero-valent iron injection
-
Kocur CMD, Lomheim L, Molenda O, Weber KP, Austrins LM, Sleep BE, Boparai HK, Edwards EA, O'Carroll DM: Long-term field study of microbial community and dechlorinating activity following carboxymethyl cellulose-stabilized nanoscale zero-valent iron injection. Environ Sci Technol 2016, 50: 7658-7670.
-
(2016)
Environ Sci Technol
, vol.50
, pp. 7658-7670
-
-
Kocur, C.M.D.1
Lomheim, L.2
Molenda, O.3
Weber, K.P.4
Austrins, L.M.5
Sleep, B.E.6
Boparai, H.K.7
Edwards, E.A.8
O'Carroll, D.M.9
-
62
-
-
84888627445
-
Effects of triclosan and biosolids on microbial community composition in an agricultural soil
-
Park I, Zhang N, Ogunyoku TA, Young TM, Scow KM: Effects of triclosan and biosolids on microbial community composition in an agricultural soil. Water Environ Res 2013, 85:2237-2242.
-
(2013)
Water Environ Res
, vol.85
, pp. 2237-2242
-
-
Park, I.1
Zhang, N.2
Ogunyoku, T.A.3
Young, T.M.4
Scow, K.M.5
-
63
-
-
79951810368
-
Functional gene diversity of soil microbial communities from five oil-contaminated fields in China
-
Liang Y, Van Nostrand JD, Deng Y, He Z, Wu L, Zhang X, Li G, Zhou J: Functional gene diversity of soil microbial communities from five oil-contaminated fields in China. ISME J 2011, 5:403-413.
-
(2011)
ISME J
, vol.5
, pp. 403-413
-
-
Liang, Y.1
Van Nostrand, J.D.2
Deng, Y.3
He, Z.4
Wu, L.5
Zhang, X.6
Li, G.7
Zhou, J.8
-
64
-
-
84927516837
-
Field-based evidence for consistent responses of bacterial communities to copper contamination in two contrasting agricultural soils
-
Li J, Ma YB, Hu HW, Wang JT, Liu YR, He JZ: Field-based evidence for consistent responses of bacterial communities to copper contamination in two contrasting agricultural soils. Front Microbiol 2015, 6:1-11.
-
(2015)
Front Microbiol
, vol.6
, pp. 1-11
-
-
Li, J.1
Ma, Y.B.2
Hu, H.W.3
Wang, J.T.4
Liu, Y.R.5
He, J.Z.6
-
65
-
-
58849149386
-
Effects of heavy metal contamination upon soil microbes: lead-induced changes in general and denitrifying microbial communities as evidenced by molecular markers
-
Sobolev D, Begonia MFT: Effects of heavy metal contamination upon soil microbes: lead-induced changes in general and denitrifying microbial communities as evidenced by molecular markers. Int J Environ Res Public Health 2008, 5: 450-456.
-
(2008)
Int J Environ Res Public Health
, vol.5
, pp. 450-456
-
-
Sobolev, D.1
Begonia, M.F.T.2
-
66
-
-
84986322634
-
Domestication and divergence of Saccharomyces cerevisiae beer yeasts
-
Gallone B, Steensels J, Prahl T, Soriaga L, Saels V, Herrera-Malaver B, Merlevede A, Roncoroni M, Voordeckers K, Miraglia L, et al.: Domestication and divergence of Saccharomyces cerevisiae beer yeasts. Cell 2016, 166:1397-1410. e16.
-
(2016)
Cell
, vol.166
, pp. 1397-1410. e16
-
-
Gallone, B.1
Steensels, J.2
Prahl, T.3
Soriaga, L.4
Saels, V.5
Herrera-Malaver, B.6
Merlevede, A.7
Roncoroni, M.8
Voordeckers, K.9
Miraglia, L.10
-
67
-
-
21244492315
-
Interactions between Saccharomyces cerevisiae and malolactic bacteria: preliminary characterization of a yeast proteinaceous compound(s) active against Oenococcus oeni
-
Comitini F, Ferretti R, Clementi F, Mannazzu I, Ciani M: Interactions between Saccharomyces cerevisiae and malolactic bacteria: preliminary characterization of a yeast proteinaceous compound(s) active against Oenococcus oeni. J Appl Microbiol 2005, 99:105-111.
-
(2005)
J Appl Microbiol
, vol.99
, pp. 105-111
-
-
Comitini, F.1
Ferretti, R.2
Clementi, F.3
Mannazzu, I.4
Ciani, M.5
-
68
-
-
84892263204
-
Organisms associated with acetic acid bacteria in vinegar production
-
Rainieri S, Zambonelli C: Organisms associated with acetic acid bacteria in vinegar production. Vinegars World 2009, http://dx.doi.org/10.1007/978-88-470-0866-3_5.
-
(2009)
Vinegars World
-
-
Rainieri, S.1
Zambonelli, C.2
-
69
-
-
84889091927
-
Acetic acid bacteria taxonomy from early descriptions to molecular techniques
-
Gullo M, Giudici P: Acetic acid bacteria taxonomy from early descriptions to molecular techniques. Vinegars World 2009, http://dx.doi.org/10.1007/978-88-470-0866-3_3.
-
(2009)
Vinegars World
-
-
Gullo, M.1
Giudici, P.2
-
70
-
-
69749114507
-
Biodiversity, ecological determinants, and metabolic exploitation of sourdough microbiota
-
De Vuyst L, Vrancken G, Ravyts F, Rimaux T, Weckx S: Biodiversity, ecological determinants, and metabolic exploitation of sourdough microbiota. Food Microbiol 2009, 26:666-675.
-
(2009)
Food Microbiol
, vol.26
, pp. 666-675
-
-
De Vuyst, L.1
Vrancken, G.2
Ravyts, F.3
Rimaux, T.4
Weckx, S.5
-
71
-
-
84880445186
-
Sequencing-based analysis of the bacterial and fungal composition of kefir grains and milks from multiple sources
-
Marsh AJ, O'Sullivan O, Hill C, Ross RP, Cotter PD: Sequencing-based analysis of the bacterial and fungal composition of kefir grains and milks from multiple sources. PLoS One 2013, 8.
-
(2013)
PLoS One
, vol.8
-
-
Marsh, A.J.1
O'Sullivan, O.2
Hill, C.3
Ross, R.P.4
Cotter, P.D.5
-
72
-
-
19644369575
-
Continuous enrichment culture and molecular monitoring to investigate the microbial diversity of thermophiles inhabiting deep-sea hydrothermal ecosystems
-
Postec A, Urios L, Lesongeur F, Ollivier B, Querellou J, Godfroy A: Continuous enrichment culture and molecular monitoring to investigate the microbial diversity of thermophiles inhabiting deep-sea hydrothermal ecosystems. Curr Microbiol 2005, 50:138-144.
-
(2005)
Curr Microbiol
, vol.50
, pp. 138-144
-
-
Postec, A.1
Urios, L.2
Lesongeur, F.3
Ollivier, B.4
Querellou, J.5
Godfroy, A.6
|