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Integrative Biology (United Kingdom)

Volumn 10, Issue 2, 2018, Pages 113-120

Exploring candidate biomarkers for lung and prostate cancers using gene expression and flux variability analysis

(4) Asgari, Yazdan a,b Khosravi, Pegah b,c Zabihinpour, Zahra b Habibi, Mahnaz b,d

a TEHRAN UNIVERSITY OF MEDICAL SCIENCES (Iran)

b INSTITUTE FOR RESEARCH IN FUNDAMENTAL SCIENCES IPM (Iran)

c WEILL CORNELL MEDICAL COLLEGE (United States)

d ISLAMIC AZAD UNIVERSITY (Iran)

Author keywords

[No Author keywords available]

Indexed keywords

TUMOR MARKER; TRANSCRIPTOME;

AACS GENE; ADH7 GENE; ALDH18A1 GENE; ALGORITHM; ARTICLE; CANCER CELL; CANCER GROWTH; CELL DIFFERENTIATION; G6PC2 GENE; GENE; GENE EXPRESSION; GENE REGULATORY NETWORK; GENETIC ASSOCIATION; GPT GENE; GPT2 GENE; GPX2 GENE; GUCY2D GENE; HUMAN; IDI2 GENE; INFORMATION SCIENCE; LDHB GENE; LDHD GENE; LUNG CANCER; MAJOR GENE; PNP GENE; PRDX2 GENE; PRIORITY JOURNAL; PROSTATE CANCER; RDH11 GENE; RDH12 GENE; SLC22A1 GENE; SLC7A2 GENE; BIOLOGICAL MODEL; GENETIC DATABASE; GENETICS; LUNG TUMOR; MALE; METABOLISM; METABOLOME; PROSTATE TUMOR; SYSTEMS BIOLOGY;

BIOMARKERS, TUMOR; DATABASES, GENETIC; GENE REGULATORY NETWORKS; HUMANS; INFORMATION THEORY; LUNG NEOPLASMS; MALE; METABOLOME; MODELS, BIOLOGICAL; MODELS, GENETIC; PROSTATIC NEOPLASMS; SYSTEMS BIOLOGY; TRANSCRIPTOME;

EID: 85042509249 PISSN: 17579694 EISSN: 17579708 Source Type: Journal
DOI: 10.1039/c7ib00135e Document Type: Article

Times cited : (14)

References (40)

1
- 0038048325
- T. S. Gardner D. di Bernardo D. Lorenz J. J. Collins Science 2003 301 102 105
- (2003) Science , vol.301 , pp. 102-105
- Gardner, T.S.¹ Di Bernardo, D.² Lorenz, D.³ Collins, J.J.⁴

2
- 85018967221
- A. Masoudi L. Dargahi F. Abbaszadeh M. H. Pourgholami A. Asgari M. Manoochehri M. Jorjani Behav. Brain Res. 2017 329 104 110
- (2017) Behav. Brain Res. , vol.329 , pp. 104-110
- Masoudi, A.¹ Dargahi, L.² Abbaszadeh, F.³ Pourgholami, M.H.⁴ Asgari, A.⁵ Manoochehri, M.⁶ Jorjani, M.⁷

3
- 84919660482
- A. Masoudi-Nejad Y. Asgari Semin. Cancer Biol. 2015 30 21 29
- (2015) Semin. Cancer Biol. , vol.30 , pp. 21-29
- Masoudi-Nejad, A.¹ Asgari, Y.²

4
- 85042476307
- A. Masoudi-Nejad, A. Salehzadeh-Yazdi, S. Akbari-Birgani and Y. Asgari, Biological Knowledge Discovery Handbook: Preprocessing, Mining, and Postprocessing of Biological Data, 2014, pp. 1023-1048
- (2014) Biological Knowledge Discovery Handbook: Preprocessing, Mining, and Postprocessing of Biological Data , pp. 1023-1048
- Masoudi-Nejad, A.¹ Salehzadeh-Yazdi, A.² Akbari-Birgani, S.³ Asgari, Y.⁴

5
- 84855719307
- F. Chiaradonna R. M. Moresco C. Airoldi D. Gaglio R. Palorini F. Nicotra C. Messa L. Alberghina Biotechnol. Adv. 2012 30 30 51
- (2012) Biotechnol. Adv. , vol.30 , pp. 30-51
- Chiaradonna, F.¹ Moresco, R.M.² Airoldi, C.³ Gaglio, D.⁴ Palorini, R.⁵ Nicotra, F.⁶ Messa, C.⁷ Alberghina, L.⁸

6
- 0142122303
- K. J. Kauffman P. Prakash J. S. Edwards Curr. Opin. Biotechnol. 2003 14 491 496
- (2003) Curr. Opin. Biotechnol. , vol.14 , pp. 491-496
- Kauffman, K.J.¹ Prakash, P.² Edwards, J.S.³

7
- 84901306814
- D. Machado M. Herrgård PLoS Comput. Biol. 2014 10 e1003580
- (2014) PLoS Comput. Biol. , vol.10 , pp. e1003580
- Machado, D.¹ Herrgård, M.²

8
- 79953661070
- T. Shlomi T. Benyamini E. Gottlieb R. Sharan E. Ruppin PLoS Comput. Biol. 2011 7 e1002018
- (2011) PLoS Comput. Biol. , vol.7 , pp. e1002018
- Shlomi, T.¹ Benyamini, T.² Gottlieb, E.³ Sharan, R.⁴ Ruppin, E.⁵

9
- 84865425410
- G. Facchetti M. Zampieri C. Altafini BMC Syst. Biol. 2012 6 115
- (2012) BMC Syst. Biol. , vol.6 , pp. 115
- Facchetti, G.¹ Zampieri, M.² Altafini, C.³

10
- 84897420143
- S. C. Dolfi L. L. Chan J. Qiu P. M. Tedeschi J. R. Bertino K. M. Hirshfield Z. N. Oltvai A. Vazquez Canc. Metabol. 2013 1 20
- (2013) Canc. Metabol. , vol.1 , pp. 20
- Dolfi, S.C.¹ Chan, L.L.² Qiu, J.³ Tedeschi, P.M.⁴ Bertino, J.R.⁵ Hirshfield, K.M.⁶ Oltvai, Z.N.⁷ Vazquez, A.⁸

11
- 84930377006
- K. Yizhak E. Gaude S. Le Devedec Y. Y. Waldman G. Y. Stein B. van de Water C. Frezza E. Ruppin eLife 2014 3 e03641
- (2014) ELife , vol.3 , pp. e03641
- Yizhak, K.¹ Gaude, E.² Le Devedec, S.³ Waldman, Y.Y.⁴ Stein, G.Y.⁵ Van De Water, B.⁶ Frezza, C.⁷ Ruppin, E.⁸

12
- 84907379295
- K. Yizhak S. E. Le Devedec V. M. Rogkoti F. Baenke V. C. de Boer C. Frezza A. Schulze B. van de Water E. Ruppin Mol. Syst. Biol. 2014 10 744
- (2014) Mol. Syst. Biol. , vol.10 , pp. 744
- Yizhak, K.¹ Le Devedec, S.E.² Rogkoti, V.M.³ Baenke, F.⁴ De Boer, V.C.⁵ Frezza, C.⁶ Schulze, A.⁷ Van De Water, B.⁸ Ruppin, E.⁹

13
- 84898857127
- M. Wu C. Chan Bioinformatics 2014 30 1163 1171
- (2014) Bioinformatics , vol.30 , pp. 1163-1171
- Wu, M.¹ Chan, C.²

14
- 84886083861
- H. L. Kotze E. G. Armitage K. J. Sharkey J. W. Allwood W. B. Dunn K. J. Williams R. Goodacre BMC Syst. Biol. 2013 7 107
- (2013) BMC Syst. Biol. , vol.7 , pp. 107
- Kotze, H.L.¹ Armitage, E.G.² Sharkey, K.J.³ Allwood, J.W.⁴ Dunn, W.B.⁵ Williams, K.J.⁶ Goodacre, R.⁷

15
- 84927786144
- Y. Asgari Z. Zabihinpour A. Salehzadeh-Yazdi F. Schreiber A. Masoudi-Nejad Genomics 2015 105 275 281
- (2015) Genomics , vol.105 , pp. 275-281
- Asgari, Y.¹ Zabihinpour, Z.² Salehzadeh-Yazdi, A.³ Schreiber, F.⁴ Masoudi-Nejad, A.⁵

16
- 84907584722
- H. Nam M. Campodonico A. Bordbar D. R. Hyduke S. Kim D. C. Zielinski B. O. Palsson PLoS Comput. Biol. 2014 10 e1003837
- (2014) PLoS Comput. Biol. , vol.10 , pp. e1003837
- Nam, H.¹ Campodonico, M.² Bordbar, A.³ Hyduke, D.R.⁴ Kim, S.⁵ Zielinski, D.C.⁶ Palsson, B.O.⁷

17
- 84898663879
- R. Agren A. Mardinoglu A. Asplund C. Kampf M. Uhlen J. Nielsen Mol. Syst. Biol. 2014 10 721
- (2014) Mol. Syst. Biol. , vol.10 , pp. 721
- Agren, R.¹ Mardinoglu, A.² Asplund, A.³ Kampf, C.⁴ Uhlen, M.⁵ Nielsen, J.⁶

18
- 84894266778
- Y. Asgari A. Salehzadeh-Yazdi F. Schreiber A. Masoudi-Nejad PLoS One 2013 8 e79397
- (2013) PLoS One , vol.8 , pp. e79397
- Asgari, Y.¹ Salehzadeh-Yazdi, A.² Schreiber, F.³ Masoudi-Nejad, A.⁴

19
- 1642457253
- R. Mahadevan C. H. Schilling Metab. Eng. 2003 5 264 276
- (2003) Metab. Eng. , vol.5 , pp. 264-276
- Mahadevan, R.¹ Schilling, C.H.²

20
- 0004026407
- W. H. Freeman
- D. L. Nelson and M. M. Cox, Lehninger Principles of Biochemistry, W. H. Freeman, 2005
- (2005) Lehninger Principles of Biochemistry
- Nelson, D.L.¹ Cox, M.M.²

21
- 77955281020
- D. R. Wise C. B. Thompson Trends Biochem. Sci. 2010 35 427 433
- (2010) Trends Biochem. Sci. , vol.35 , pp. 427-433
- Wise, D.R.¹ Thompson, C.B.²

22
- 60449113391
- S. J. Williams D. Cvetkovic T. C. Hamilton Gynecol. Oncol. 2009 112 637 645
- (2009) Gynecol. Oncol. , vol.112 , pp. 637-645
- Williams, S.J.¹ Cvetkovic, D.² Hamilton, T.C.³

23
- 84908077934
- K. Leithner A. Hrzenjak H. Olschewski Proc. Natl. Acad. Sci. U. S. A. 2014 111 E4394
- (2014) Proc. Natl. Acad. Sci. U. S. A. , vol.111 , pp. E4394
- Leithner, K.¹ Hrzenjak, A.² Olschewski, H.³

24
- 85044688586
- J. J. Faith B. Hayete J. T. Thaden I. Mogno J. Wierzbowski G. Cottarel S. Kasif J. J. Collins T. S. Gardner PLoS Biol. 2007 5 e8
- (2007) PLoS Biol. , vol.5 , pp. e8
- Faith, J.J.¹ Hayete, B.² Thaden, J.T.³ Mogno, I.⁴ Wierzbowski, J.⁵ Cottarel, G.⁶ Kasif, S.⁷ Collins, J.J.⁸ Gardner, T.S.⁹

25
- 84891467279
- J. Li H. Wei P. X. Zhao BioMed Res. Int. 2013 2013 856325
- (2013) BioMed Res. Int. , vol.2013 , pp. 856325
- Li, J.¹ Wei, H.² Zhao, P.X.³

26
- 34247535888
- S. Huang D. E. Ingber Breast Dis. 2006 26 27 54
- (2006) Breast Dis. , vol.26 , pp. 27-54
- Huang, S.¹ Ingber, D.E.²

27
- 84865314338
- W. Jeong H. S. Kim Y. B. Kim M. A. Kim W. Lim J. Kim H. J. Jang D. H. Suh K. Kim H. H. Chung F. W. Bazer Y. S. Song J. Y. Han G. Song Exp. Biol. Med. 2012 237 758 767
- (2012) Exp. Biol. Med. , vol.237 , pp. 758-767
- Jeong, W.¹ Kim, H.S.² Kim, Y.B.³ Kim, M.A.⁴ Lim, W.⁵ Kim, J.⁶ Jang, H.J.⁷ Suh, D.H.⁸ Kim, K.⁹ Chung, H.H.¹⁰ Bazer, F.W.¹¹ Song, Y.S.¹² Han, J.Y.¹³ Song, G.¹⁴

28
- 84868002392
- R. R. Wei M. Y. Zhang H. L. Rao H. Y. Pu H. Z. Zhang H. Y. Wang Med. Oncol. 2012 29 2737 2743
- (2012) Med. Oncol. , vol.29 , pp. 2737-2743
- Wei, R.R.¹ Zhang, M.Y.² Rao, H.L.³ Pu, H.Y.⁴ Zhang, H.Z.⁵ Wang, H.Y.⁶

29
- 0028864561
- D. B. Kohn K. I. Weinberg J. A. Nolta L. N. Heiss C. Lenarsky G. M. Crooks M. E. Hanley G. Annett J. S. Brooks A. el-Khoureiy et al. Nat. Med. 1995 1 1017 1023
- (1995) Nat. Med. , vol.1 , pp. 1017-1023
- Kohn, D.B.¹ Weinberg, K.I.² Nolta, J.A.³ Heiss, L.N.⁴ Lenarsky, C.⁵ Crooks, G.M.⁶ Hanley, M.E.⁷ Annett, G.⁸ Brooks, J.S.⁹ El-Khoureiy, A.¹⁰

30
- 84898740640
- R. W. Serra M. Fang S. M. Park L. Hutchinson M. R. Green eLife 2014 3 e02313
- (2014) ELife , vol.3 , pp. e02313
- Serra, R.W.¹ Fang, M.² Park, S.M.³ Hutchinson, L.⁴ Green, M.R.⁵

31
- 44349179705
- M. Hashibe J. D. McKay M. P. Curado J. C. Oliveira S. Koifman R. Koifman D. Zaridze O. Shangina V. Wunsch-Filho J. Eluf-Neto J. E. Levi E. Matos P. Lagiou A. Lagiou S. Benhamou C. Bouchardy N. Szeszenia-Dabrowska A. Menezes M. M. Dall'Agnol F. Merletti L. Richiardi L. Fernandez J. Lence R. Talamini L. Barzan D. Mates I. N. Mates K. Kjaerheim G. J. Macfarlane T. V. Macfarlane L. Simonato C. Canova I. Holcatova A. Agudo X. Castellsague R. Lowry V. Janout H. Kollarova D. I. Conway P. A. McKinney A. Znaor E. Fabianova V. Bencko J. Lissowska A. Chabrier R. J. Hung V. Gaborieau P. Boffetta P. Brennan Nat. Genet. 2008 40 707 709
- (2008) Nat. Genet. , vol.40 , pp. 707-709
- Hashibe, M.¹ McKay, J.D.² Curado, M.P.³ Oliveira, J.C.⁴ Koifman, S.⁵ Koifman, R.⁶ Zaridze, D.⁷ Shangina, O.⁸ Wunsch-Filho, V.⁹ Eluf-Neto, J.¹⁰ Levi, J.E.¹¹ Matos, E.¹² Lagiou, P.¹³ Lagiou, A.¹⁴ Benhamou, S.¹⁵ Bouchardy, C.¹⁶ Szeszenia-Dabrowska, N.¹⁷ Menezes, A.¹⁸ Dall'Agnol, M.M.¹⁹ Merletti, F.²⁰ more..

32
- 40349106087
- X. Z. Chang D. Q. Li Y. F. Hou J. Wu J. S. Lu G. H. Di W. Jin Z. L. Ou Z. Z. Shen Z. M. Shao Breast Cancer Res. 2007 9 R76
- (2007) Breast Cancer Res. , vol.9 , pp. R76
- Chang, X.Z.¹ Li, D.Q.² Hou, Y.F.³ Wu, J.⁴ Lu, J.S.⁵ Di, G.H.⁶ Jin, W.⁷ Ou, Z.L.⁸ Shen, Z.Z.⁹ Shao, Z.M.¹⁰

33
- 84871752376
- M. Aluru J. Zola D. Nettleton S. Aluru Nucleic Acids Res. 2013 41 e24
- (2013) Nucleic Acids Res. , vol.41 , pp. e24
- Aluru, M.¹ Zola, J.² Nettleton, D.³ Aluru, S.⁴

34
- 84908509275
- P. Khosravi V. H. Gazestani Y. Asgari B. Law M. Sadeghi B. Goliaei Comput. Biol. Med. 2014 54 24 31
- (2014) Comput. Biol. Med. , vol.54 , pp. 24-31
- Khosravi, P.¹ Gazestani, V.H.² Asgari, Y.³ Law, B.⁴ Sadeghi, M.⁵ Goliaei, B.⁶

35
- 70049110173
- C. Colijn A. Brandes J. Zucker D. S. Lun B. Weiner M. R. Farhat T. Y. Cheng D. B. Moody M. Murray J. E. Galagan PLoS Comput. Biol. 2009 5 e1000489
- (2009) PLoS Comput. Biol. , vol.5 , pp. e1000489
- Colijn, C.¹ Brandes, A.² Zucker, J.³ Lun, D.S.⁴ Weiner, B.⁵ Farhat, M.R.⁶ Cheng, T.Y.⁷ Moody, D.B.⁸ Murray, M.⁹ Galagan, J.E.¹⁰

36
- 79551662521
- J. Schellenberger R. Que R. M. Fleming I. Thiele J. D. Orth A. M. Feist D. C. Zielinski A. Bordbar N. E. Lewis S. Rahmanian J. Kang D. R. Hyduke B. O. Palsson Nat. Protoc. 2011 6 1290 1307
- (2011) Nat. Protoc. , vol.6 , pp. 1290-1307
- Schellenberger, J.¹ Que, R.² Fleming, R.M.³ Thiele, I.⁴ Orth, J.D.⁵ Feist, A.M.⁶ Zielinski, D.C.⁷ Bordbar, A.⁸ Lewis, N.E.⁹ Rahmanian, S.¹⁰ Kang, J.¹¹ Hyduke, D.R.¹² Palsson, B.O.¹³

37
- 84944324783
- Toronto, Canada
- P. Khosravi, V. H. Gazestani, B. Law, G. D. Bader and M. Sadeghi, IFMBE Proceeding, Toronto, Canada, 2015
- (2015) IFMBE Proceeding
- Khosravi, P.¹ Gazestani, V.H.² Law, B.³ Bader, G.D.⁴ Sadeghi, M.⁵

38
- 83755163018
- D. N. Reshef Y. A. Reshef H. K. Finucane S. R. Grossman G. McVean P. J. Turnbaugh E. S. Lander M. Mitzenmacher P. C. Sabeti Science 2011 334 1518 1524
- (2011) Science , vol.334 , pp. 1518-1524
- Reshef, D.N.¹ Reshef, Y.A.² Finucane, H.K.³ Grossman, S.R.⁴ McVean, G.⁵ Turnbaugh, P.J.⁶ Lander, E.S.⁷ Mitzenmacher, M.⁸ Sabeti, P.C.⁹

39
- 77958069025
- T. P. Lu M. H. Tsai J. M. Lee C. P. Hsu P. C. Chen C. W. Lin J. Y. Shih P. C. Yang C. K. Hsiao L. C. Lai E. Y. Chuang Cancer Epidemiol., Biomarkers Prev. 2010 19 2590 2597
- (2010) Cancer Epidemiol., Biomarkers Prev. , vol.19 , pp. 2590-2597
- Lu, T.P.¹ Tsai, M.H.² Lee, J.M.³ Hsu, C.P.⁴ Chen, P.C.⁵ Lin, C.W.⁶ Shih, J.Y.⁷ Yang, P.C.⁸ Hsiao, C.K.⁹ Lai, L.C.¹⁰ Chuang, E.Y.¹¹

40
- 84862826063
- C. A. Derosa B. Furusato S. Shaheduzzaman V. Srikantan Z. Wang Y. Chen M. Seifert L. Ravindranath D. Young M. Nau A. Dobi T. Werner D. G. McLeod M. T. Vahey I. A. Sesterhenn S. Srivastava G. Petrovics Prostate Cancer Prostatic Dis. 2012 15 150 156
- (2012) Prostate Cancer Prostatic Dis. , vol.15 , pp. 150-156
- Derosa, C.A.¹ Furusato, B.² Shaheduzzaman, S.³ Srikantan, V.⁴ Wang, Z.⁵ Chen, Y.⁶ Seifert, M.⁷ Ravindranath, L.⁸ Young, D.⁹ Nau, M.¹⁰ Dobi, A.¹¹ Werner, T.¹² McLeod, D.G.¹³ Vahey, M.T.¹⁴ Sesterhenn, I.A.¹⁵ Srivastava, S.¹⁶ Petrovics, G.¹⁷

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