-
1
-
-
84975795680
-
Anintegrated mapof genetic variation from 1, 092 human genomes
-
The 1000 Genomes Project Consortium. 2012. Anintegrated mapof genetic variation from 1, 092 human genomes. Nature 491: 56-65.
-
(2012)
Nature
, vol.491
, pp. 56-65
-
-
-
2
-
-
85037705797
-
The Ensembl gene annotation system
-
Aken BL, Ayling S, Barrell D, Clarke L, Curwen V, Fairley S, Fernandez Banet J, Billis K, García Girón C, Hourlier T, et al. 2016. The Ensembl gene annotation system. Database (Oxford) doi: 10.1093/database/baw093.
-
(2016)
Database (Oxford)
-
-
Aken, B.L.1
Ayling, S.2
Barrell, D.3
Clarke, L.4
Curwen, V.5
Fairley, S.6
Fernandez Banet, J.7
Billis, K.8
García Girón, C.9
Hourlier, T.10
-
3
-
-
77958471357
-
DESeq: Differential expression analysis for sequence count data
-
Anders S, Huber W. 2010. DESeq: differential expression analysis for sequence count data. Genome Biol 11: R106.
-
(2010)
Genome Biol
, vol.11
, pp. R106
-
-
Anders, S.1
Huber, W.2
-
4
-
-
85016217986
-
Natural selection in the great apes
-
Cagan A, Theunert C, Laayouni H, Santpere G, Pybus M, Casals F, Prüfer K, Navarro A, Marques-Bonet T, Bertranpetit J, et al. 2016. Natural selection in the great apes. Mol Biol Evol 33: 3268-3283.
-
(2016)
Mol Biol Evol
, vol.33
, pp. 3268-3283
-
-
Cagan, A.1
Theunert, C.2
Laayouni, H.3
Santpere, G.4
Pybus, M.5
Casals, F.6
Prüfer, K.7
Navarro, A.8
Marques-Bonet, T.9
Bertranpetit, J.10
-
5
-
-
0037464547
-
Genetics and the making of Homo sapiens
-
Carroll SB. 2003. Genetics and the making of Homo sapiens. Nature 422: 849-857.
-
(2003)
Nature
, vol.422
, pp. 849-857
-
-
Carroll, S.B.1
-
6
-
-
0027305597
-
The effect of deleterious mutations on neutral molecular variation
-
Charlesworth B, Morgan MT, Charlesworth D. 1993. The effect of deleterious mutations on neutral molecular variation. Genetics 134: 1289-1303.
-
(1993)
Genetics
, vol.134
, pp. 1289-1303
-
-
Charlesworth, B.1
Morgan, M.T.2
Charlesworth, D.3
-
7
-
-
77649260327
-
Population differentiation as a test for selective sweeps
-
Chen H, Patterson N, Reich D. 2010. Population differentiation as a test for selective sweeps. Genome Res 20: 393-402.
-
(2010)
Genome Res
, vol.20
, pp. 393-402
-
-
Chen, H.1
Patterson, N.2
Reich, D.3
-
8
-
-
79960405019
-
The variant call format and VCFtools
-
Danecek P, Auton A, Abecasis G, Albers CA, Banks E, DePristo MA, Handsaker RE, Lunter G, Marth GT, Sherry ST, et al. 2011. The variant call format and VCFtools. Bioinformatics 27: 2156-2158.
-
(2011)
Bioinformatics
, vol.27
, pp. 2156-2158
-
-
Danecek, P.1
Auton, A.2
Abecasis, G.3
Albers, C.A.4
Banks, E.5
Ma, D.6
Handsaker, R.E.7
Lunter, G.8
Marth, G.T.9
Sherry, S.T.10
-
10
-
-
84940760094
-
Strong selective sweeps on the X chromosome in the human-chimpanzee ancestor explain its low divergence
-
Dutheil JY, Munch K, Nam K, Mailund T, Schierup MH. 2015. Strong selective sweeps on the X chromosome in the human-chimpanzee ancestor explain its low divergence. PLoS Genet 11: e1005451.
-
(2015)
PLoS Genet
, vol.11
, pp. e1005451
-
-
Dutheil, J.Y.1
Munch, K.2
Nam, K.3
Mailund, T.4
Schierup, M.H.5
-
11
-
-
84901393253
-
Genome-wide signals of positive selection in human evolution
-
Enard D, Messer PW, Petrov DA. 2014. Genome-wide signals of positive selection in human evolution. Genome Res 24: 885-895.
-
(2014)
Genome Res
, vol.24
, pp. 885-895
-
-
Enard, D.1
Messer, P.W.2
Petrov, D.A.3
-
12
-
-
77955381733
-
MSMS: A coalescent simulation program including recombination, demographic structure and selection at a single locus
-
Ewing G, Hermisson J. 2010. MSMS: a coalescent simulation program including recombination, demographic structure and selection at a single locus. Bioinformatics 26: 2064-2065.
-
(2010)
Bioinformatics
, vol.26
, pp. 2064-2065
-
-
Ewing, G.1
Hermisson, J.2
-
13
-
-
0033911640
-
Hitchhiking under positive Darwinian selection
-
Fay JC, Wu CI. 2000. Hitchhiking under positive Darwinian selection. Genetics 155: 1405-1413.
-
(2000)
Genetics
, vol.155
, pp. 1405-1413
-
-
Fay, J.C.1
Wu, C.I.2
-
14
-
-
0036779497
-
Developmental dyslexia: Genetic dissection of a complex cognitive trait
-
Fisher SE, DeFries JC. 2002. Developmental dyslexia: genetic dissection of a complex cognitive trait. Nat Rev Neurosci 3: 767-780.
-
(2002)
Nat Rev Neurosci
, vol.3
, pp. 767-780
-
-
Fisher, S.E.1
DeFries, J.C.2
-
15
-
-
84914688940
-
Genome sequence of a 45, 000-year-old modern human from western Siberia
-
Fu Q, Li H, Moorjani P, Jay F, Slepchenko SM, Bondarev AA, Johnson PL, Aximu-Petri A, Prüfer K, de Filippo C, et al. 2014. Genome sequence of a 45, 000-year-old modern human from western Siberia. Nature 514: 445-449.
-
(2014)
Nature
, vol.514
, pp. 445-449
-
-
Fu, Q.1
Li, H.2
Moorjani, P.3
Jay, F.4
Slepchenko, S.M.5
Bondarev, A.A.6
Johnson, P.L.7
Aximu-Petri, A.8
Prüfer, K.9
De Filippo, C.10
-
16
-
-
84939496491
-
An early mod-ern human from Romania with a recent Neanderthal ancestor
-
Fu Q, Hajdinjak M, Moldovan OT, Constantin S, Mallick S, Skoglund P, Patterson N, Rohland N, Lazaridis I, Nickel B, et al. 2015. An early mod-ern human from Romania with a recent Neanderthal ancestor. Nature 524: 216-219.
-
(2015)
Nature
, vol.524
, pp. 216-219
-
-
Fu, Q.1
Hajdinjak, M.2
Moldovan, O.T.3
Constantin, S.4
Mallick, S.5
Skoglund, P.6
Patterson, N.7
Rohland, N.8
Lazaridis, I.9
Nickel, B.10
-
17
-
-
0032498306
-
Doublecortin, a brain-specific gene mutated in human X-linked lissencephaly and double cortex syndrome, encodes a putative signaling protein
-
Gleeson JG, Allen KM, Fox JW, Lamperti ED, Berkovic S, Scheffer I, Cooper EC, Dobyns WB, Minnerath SR, Ross ME, et al. 1998. Doublecortin, a brain-specific gene mutated in human X-linked lissencephaly and double cortex syndrome, encodes a putative signaling protein. Cell 92: 63-72.
-
(1998)
Cell
, vol.92
, pp. 63-72
-
-
Gleeson, J.G.1
Allen, K.M.2
Fox, J.W.3
Lamperti, E.D.4
Berkovic, S.5
Scheffer, I.6
Cooper, E.C.7
Dobyns, W.B.8
Minnerath, S.R.9
Ross, M.E.10
-
18
-
-
0033152450
-
Doublecortin is a micro-tubule-associated protein and isexpressed widely by migrating neurons
-
Gleeson JG, Lin PT, Flanagan LA, Walsh CA. 1999. Doublecortin is a micro-tubule-associated protein and isexpressed widely by migrating neurons. Neuron 23: 257-271.
-
(1999)
Neuron
, vol.23
, pp. 257-271
-
-
Gleeson, J.G.1
Lin, P.T.2
Flanagan, L.A.3
Walsh, C.A.4
-
19
-
-
77952136530
-
A draft sequence of the Neandertal genome
-
Green RE, Krause J, Briggs AW, Maricic T, Stenzel U, Kircher M, Patterson N, Li H, Zhai W, Fritz MH, et al. 2010. A draft sequence of the Neandertal genome. Science 328: 710-722.
-
(2010)
Science
, vol.328
, pp. 710-722
-
-
Green, R.E.1
Krause, J.2
Briggs, A.W.3
Maricic, T.4
Stenzel, U.5
Kircher, M.6
Patterson, N.7
Li, H.8
Zhai, W.9
Fritz, M.H.10
-
20
-
-
79951829399
-
Classic selective sweeps were rare in recent human evolution
-
Hernandez RD, Kelley JL, Elyashiv E, Melton SC, Auton A, McVean G, 1000 Genomes Project, Sella G, Przeworski M. 2011. Classic selective sweeps were rare in recent human evolution. Science 331: 920-924.
-
(2011)
Science
, vol.331
, pp. 920-924
-
-
Hernandez, R.D.1
Kelley, J.L.2
Elyashiv, E.3
Melton, S.C.4
Auton, A.5
McVean, G.6
Sella, G.7
Przeworski, M.8
-
21
-
-
80051679387
-
The landscape of recombination in African Americans
-
Hinch AG, Tandon A, Patterson N, Song Y, Rohland N, Palmer CD, Chen GK, Wang K, Buxbaum SG, Akylbekova EL, et al. 2011. The landscape of recombination in African Americans. Nature 476: 170-175.
-
(2011)
Nature
, vol.476
, pp. 170-175
-
-
Hinch, A.G.1
Tandon, A.2
Patterson, N.3
Song, Y.4
Rohland, N.5
Palmer, C.D.6
Chen, G.K.7
Wang, K.8
Buxbaum, S.G.9
Akylbekova, E.L.10
-
22
-
-
0023339852
-
A test of neutral molecular evolution based on nucleotide data
-
Hudson RR, Kreitman M, Aguadé M. 1987. A test of neutral molecular evolution based on nucleotide data. Genetics 116: 153-159.
-
(1987)
Genetics
, vol.116
, pp. 153-159
-
-
Hudson, R.R.1
Kreitman, M.2
Aguadé, M.3
-
23
-
-
0036189827
-
Detecting a local signature of genetic hitchhiking along a recombining chromosome
-
Kim Y, Stephan W. 2002. Detecting a local signature of genetic hitchhiking along a recombining chromosome. Genetics 160: 765-777.
-
(2002)
Genetics
, vol.160
, pp. 765-777
-
-
Kim, Y.1
Stephan, W.2
-
24
-
-
0016669094
-
Evolution at two levels in humans and chimpanzees
-
King MC, Wilson AC. 1975. Evolution at two levels in humans and chimpanzees. Science 188: 107-116.
-
(1975)
Science
, vol.188
, pp. 107-116
-
-
King, M.C.1
Wilson, A.C.2
-
25
-
-
78049354879
-
Fine-scale recombination rate differences between sexes, populations and individuals
-
Kong A, Thorleifsson G, Gudbjartsson DF, Masson G, Sigurdsson A, Jonasdottir A, Walters GB, Jonasdottir A, Gylfason A, Kristinsson KT, et al. 2010. Fine-scale recombination rate differences between sexes, populations and individuals. Nature 467: 1099-1103.
-
(2010)
Nature
, vol.467
, pp. 1099-1103
-
-
Kong, A.1
Thorleifsson, G.2
Gudbjartsson, D.F.3
Masson, G.4
Sigurdsson, A.5
Jonasdottir, A.6
Walters, G.B.7
Jonasdottir, A.8
Gylfason, A.9
Kristinsson, K.T.10
-
26
-
-
58149168840
-
The population genetics of dN/dS
-
Kryazhimskiy S, Plotkin JB. 2008. The population genetics of dN/dS. PLoS Genet 4: e1000304.
-
(2008)
PLoS Genet
, vol.4
, pp. e1000304
-
-
Kryazhimskiy, S.1
Plotkin, J.B.2
-
27
-
-
75649126932
-
How culture shaped the human genome: Bringing genetics and the human sciences together
-
Laland KN, Odling-Smee J, Myles S. 2010. How culture shaped the human genome: bringing genetics and the human sciences together. Nat Rev Genet 11: 137-148.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 137-148
-
-
Laland, K.N.1
Odling-Smee, J.2
Myles, S.3
-
28
-
-
84912075548
-
The Red Queen model of recombination hotspots evolution in the light of archaic and modern human genomes
-
Lesecque Y, Glémin S, Lartillot N, Mouchiroud D, Duret L. 2014. The Red Queen model of recombination hotspots evolution in the light of archaic and modern human genomes. PLoS Genet 10: e1004790.
-
(2014)
PLoS Genet
, vol.10
, pp. e1004790
-
-
Lesecque, Y.1
Glémin, S.2
Lartillot, N.3
Mouchiroud, D.4
Duret, L.5
-
29
-
-
79960914105
-
Inference of human population history from individual whole-genome sequences
-
Li H, Durbin R. 2011. Inference of human population history from individual whole-genome sequences. Nature 475: 493-496.
-
(2011)
Nature
, vol.475
, pp. 493-496
-
-
Li, H.1
Durbin, R.2
-
30
-
-
79251553493
-
Comparative and demographic analysis of orang-utan genomes
-
Locke DP, Hillier LW, Warren WC, Worley KC, Nazareth LV, Muzny DM, Yang SP, Wang ZY, Chinwalla AT, Minx P, et al. 2011. Comparative and demographic analysis of orang-utan genomes. Nature 469: 529-533.
-
(2011)
Nature
, vol.469
, pp. 529-533
-
-
Locke, D.P.1
Hillier, L.W.2
Warren, W.C.3
Worley, K.C.4
Nazareth, L.V.5
Muzny, D.M.6
Yang, S.P.7
Wang, Z.Y.8
Chinwalla, A.T.9
Minx, P.10
-
32
-
-
67149096366
-
Widespread genomic signatures of natural selection in hominid evolution
-
McVicker G, Gordon D, Davis C, Green P. 2009. Widespread genomic signatures of natural selection in hominid evolution. PLoS Genet 5: e1000471.
-
(2009)
PLoS Genet
, vol.5
, pp. e1000471
-
-
McVicker, G.1
Gordon, D.2
Davis, C.3
Green, P.4
-
33
-
-
84881041428
-
SLiM: Simulating evolution with selection and linkage
-
Messer PW. 2013. SLiM: simulating evolution with selection and linkage. Genetics 194: 1037-1039.
-
(2013)
Genetics
, vol.194
, pp. 1037-1039
-
-
Messer, P.W.1
-
34
-
-
84867331947
-
A high-coverage genome se-quence from an archaic Denisovan individual
-
Meyer M, Kircher M, Gansauge MT, Li H, Racimo F, Mallick S, Schraiber JG, Jay F, Prüfer K, de Filippo C, et al. 2012. A high-coverage genome se-quence from an archaic Denisovan individual. Science 338: 222-226.
-
(2012)
Science
, vol.338
, pp. 222-226
-
-
Meyer, M.1
Kircher, M.2
Gansauge, M.T.3
Li, H.4
Racimo, F.5
Mallick, S.6
Schraiber, J.G.7
Jay, F.8
Prüfer, K.9
De Filippo, C.10
-
35
-
-
24344500211
-
Initial sequence of the chimpanzee genome and comparison with the human genome
-
Mikkelsen TS, Hillier LW, Eichler EE, Zody MC, Jaffe DB, Yang SP, Enard W, Hellmann I, Lindblad-Toh K, Altheide TK, et al. 2005. Initial sequence of the chimpanzee genome and comparison with the human genome. Nature 437: 69-87.
-
(2005)
Nature
, vol.437
, pp. 69-87
-
-
Mikkelsen, T.S.1
Hillier, L.W.2
Eichler, E.E.3
Zody, M.C.4
Jaffe, D.B.5
Yang, S.P.6
Enard, W.7
Hellmann, I.8
Lindblad-Toh, K.9
Altheide, T.K.10
-
36
-
-
84895514565
-
A fine-scale recombination map of the human-chimpanzee ancestor reveals faster change in humans than in chimpanzees and a strong impact of GC-biased gene conversion
-
Munch K, Mailund T, Dutheil JY, Schierup MH. 2014. A fine-scale recombination map of the human-chimpanzee ancestor reveals faster change in humans than in chimpanzees and a strong impact of GC-biased gene conversion. Genome Res 24: 467-474.
-
(2014)
Genome Res
, vol.24
, pp. 467-474
-
-
Munch, K.1
Mailund, T.2
Dutheil, J.Y.3
Schierup, M.H.4
-
37
-
-
84929587538
-
Extreme selective sweeps independently targeted the X chromosomes of the great apes
-
Nam K, Munch K, Hobolth A, Dutheil JY, Veeramah KR, Woerner AE, Hammer MF, Great Ape Genome Diversity Project, Mailund T, Schierup MH. 2015. Extreme selective sweeps independently targeted the X chromosomes of the great apes. Proc Natl Acad Sci 112: 6413-6418.
-
(2015)
Proc Natl Acad Sci
, vol.112
, pp. 6413-6418
-
-
Nam, K.1
Munch, K.2
Hobolth, A.3
Dutheil, J.Y.4
Veeramah, K.R.5
Woerner, A.E.6
Hammer, M.F.7
Great Ape Genome Diversity Project Mailund, T.8
Schierup, M.H.9
-
38
-
-
35348988170
-
Recent and ongoing selection in the human genome
-
Nielsen R, Hellmann I, Hubisz M, Bustamante C, Clark AG. 2007. Recent and ongoing selection in the human genome. Nat Rev Genet 8:857-868.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 857-868
-
-
Nielsen, R.1
Hellmann, I.2
Hubisz, M.3
Bustamante, C.4
Clark, A.G.5
-
40
-
-
84897130215
-
The human condition-a molecular approach
-
Pääbo S. 2014. The human condition-a molecular approach. Cell 157: 216-226.
-
(2014)
Cell
, vol.157
, pp. 216-226
-
-
Pääbo, S.1
-
41
-
-
0001770043
-
A direct search optimization method that models the objective and constraint functions by linear interpolation
-
Powell MJD. 1994. A direct search optimization method that models the objective and constraint functions by linear interpolation. Adv Optim Numer Anal 275: 51-67.
-
(1994)
Adv Optim Numer Anal
, vol.275
, pp. 51-67
-
-
Powell, M.J.D.1
-
42
-
-
33847173733
-
FUNC: A package for detecting significant associations between gene sets and ontological annotations
-
Prüfer K, Muetzel B, Do HH, Weiss G, Khaitovich P, Rahm E, Pääbo S, Lachmann M, Enard W. 2007. FUNC: a package for detecting significant associations between gene sets and ontological annotations. BMC Bioinformatics 8: 41.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 41
-
-
Prüfer, K.1
Muetzel, B.2
Do, H.H.3
Weiss, G.4
Khaitovich, P.5
Rahm, E.6
Pääbo, S.7
Lachmann, M.8
Enard, W.9
-
43
-
-
84862980012
-
The bonobo genome compared with the chimpanzee and human genomes
-
Prüfer K, Munch K, Hellmann I, Akagi K, Miller JR, Walenz B, Koren S, Sutton G, Kodira C, Winer R, et al. 2012. The bonobo genome compared with the chimpanzee and human genomes. Nature 486: 527-531.
-
(2012)
Nature
, vol.486
, pp. 527-531
-
-
Prüfer, K.1
Munch, K.2
Hellmann, I.3
Akagi, K.4
Miller, J.R.5
Walenz, B.6
Koren, S.7
Sutton, G.8
Kodira, C.9
Winer, R.10
-
44
-
-
84892365780
-
The complete genome sequence of a Neanderthal from the Altai Mountains
-
Prüfer K, Racimo F, Patterson N, Jay F, Sankararaman S, Sawyer S, Heinze A, Renaud G, Sudmant PH, de Filippo C, et al. 2014. The complete genome sequence of a Neanderthal from the Altai Mountains. Nature 505: 43-49.
-
(2014)
Nature
, vol.505
, pp. 43-49
-
-
Prüfer, K.1
Racimo, F.2
Patterson, N.3
Jay, F.4
Sankararaman, S.5
Sawyer, S.6
Heinze, A.7
Renaud, G.8
Sudmant, P.H.9
De Filippo, C.10
-
45
-
-
0036196885
-
The signature of positive selection at randomly chosen loci
-
Przeworski M. 2002. The signature of positive selection at randomly chosen loci. Genetics 160: 1179-1189.
-
(2002)
Genetics
, vol.160
, pp. 1179-1189
-
-
Przeworski, M.1
-
46
-
-
0041817545
-
Estimating the time since the fixation of a beneficial allele
-
Przeworski M. 2003. Estimating the time since the fixation of a beneficial allele. Genetics 164: 1667-1676.
-
(2003)
Genetics
, vol.164
, pp. 1667-1676
-
-
Przeworski, M.1
-
47
-
-
77951092533
-
Natural selection and adaptation of molecular sequences
-
(ed. Lemey P, et al.) Cambridge University Press, New York
-
Pybus OG, Shapiro B. 2009. Natural selection and adaptation of molecular sequences. In The phylogenetic handbook (ed. Lemey P, et al.), pp. 415-417. Cambridge University Press, New York.
-
(2009)
The Phylogenetic Handbook
, pp. 415-417
-
-
Pybus, O.G.1
Shapiro, B.2
-
48
-
-
84891820090
-
1000 genomes selection browser 1.0: A genome browser dedicated to signatures of natural selection in modern humans
-
Pybus M, Dall'Olio GM, Luisi P, Uzkudun M, Carreño-Torres A, Pavlidis P, Laayouni H, Bertranpetit J, Engelken J. 2014. 1000 genomes selection browser 1.0: a genome browser dedicated to signatures of natural selection in modern humans. Nucleic Acids Res 42: D903-D909.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D903-D909
-
-
Pybus, M.1
Dall'Olio, G.M.2
Luisi, P.3
Uzkudun, M.4
Carreño-Torres, A.5
Pavlidis, P.6
Laayouni, H.7
Bertranpetit, J.8
Engelken, J.9
-
49
-
-
0024610919
-
A tutorial on hidden Markov models and selected applications in speech recognition
-
Rabiner LR. 1989. A tutorial on hidden Markov models and selected applications in speech recognition. Proc IEEE 77: 257-286.
-
(1989)
Proc IEEE
, vol.77
, pp. 257-286
-
-
Rabiner, L.R.1
-
50
-
-
84973624508
-
Testing for ancient selection using cross-population allele frequency differentiation
-
Racimo F. 2016. Testing for ancient selection using cross-population allele frequency differentiation. Genetics 202: 733-750.
-
(2016)
Genetics
, vol.202
, pp. 733-750
-
-
Racimo, F.1
-
51
-
-
84925002619
-
A test for ancient selective sweeps and an application to candidate sites in modern humans
-
Racimo F, Kuhlwilm M, Slatkin M. 2014. A test for ancient selective sweeps and an application to candidate sites in modern humans. Mol Biol Evol 31: 3344-3358.
-
(2014)
Mol Biol Evol
, vol.31
, pp. 3344-3358
-
-
Racimo, F.1
Kuhlwilm, M.2
Slatkin, M.3
-
53
-
-
0036515730
-
The probability of topological concordance of gene trees and species trees
-
Rosenberg NA. 2002. The probability of topological concordance of gene trees and species trees. Theor Popul Biol 61: 225-247.
-
(2002)
Theor Popul Biol
, vol.61
, pp. 225-247
-
-
Rosenberg, N.A.1
-
54
-
-
33745121154
-
Positive natural selection in the human lineage
-
Sabeti PC, Schaffner SF, Fry B, Lohmueller J, Varilly P, Shamovsky O, Palma A, Mikkelsen TS, Altshuler D, Lander ES. 2006. Positive natural selection in the human lineage. Science 312: 1614-1620.
-
(2006)
Science
, vol.312
, pp. 1614-1620
-
-
Sabeti, P.C.1
Schaffner, S.F.2
Fry, B.3
Lohmueller, J.4
Varilly, P.5
Shamovsky, O.6
Palma, A.7
Mikkelsen, T.S.8
Altshuler, D.9
Lander, E.S.10
-
55
-
-
35349012592
-
Genome-wide detection and characterization of positive selection in human populations
-
Sabeti PC, Varilly P, Fry B, Lohmueller J, Hostetter E, Cotsapas C, Xie X, Byrne EH, McCarroll SA, Gaudet R, et al. 2007. Genome-wide detection and characterization of positive selection in human populations. Nature 449: 913-918.
-
(2007)
Nature
, vol.449
, pp. 913-918
-
-
Sabeti, P.C.1
Varilly, P.2
Fry, B.3
Lohmueller, J.4
Hostetter, E.5
Cotsapas, C.6
Xie, X.7
Byrne, E.H.8
McCarroll, S.A.9
Gaudet, R.10
-
56
-
-
84868089030
-
The date of interbreeding between Neandertals and modern humans
-
Sankararaman S, Patterson N, Li H, Pääbo S, Reich D. 2012. The date of interbreeding between Neandertals and modern humans. PLoS Genet 8: e1002947.
-
(2012)
PLoS Genet
, vol.8
, pp. e1002947
-
-
Sankararaman, S.1
Patterson, N.2
Li, H.3
Pääbo, S.4
Reich, D.5
-
57
-
-
84897025665
-
The genomic landscape of Neanderthal ancestry in present-day humans
-
Sankararaman S, Mallick S, Dannemann M, Prüfer K, Kelso J, Pääbo S, Patterson N, Reich D. 2014. The genomic landscape of Neanderthal ancestry in present-day humans. Nature 507: 354-357.
-
(2014)
Nature
, vol.507
, pp. 354-357
-
-
Sankararaman, S.1
Mallick, S.2
Dannemann, M.3
Prüfer, K.4
Kelso, J.5
Pääbo, S.6
Patterson, N.7
Reich, D.8
-
58
-
-
84975474808
-
The combined landscape of Denisovan and Neanderthal ancestry in present-day humans
-
Sankararaman S, Mallick S, Patterson N, Reich D. 2016. The combined landscape of Denisovan and Neanderthal ancestry in present-day humans. Curr Biol 26: 1241-1247.
-
(2016)
Curr Biol
, vol.26
, pp. 1241-1247
-
-
Sankararaman, S.1
Mallick, S.2
Patterson, N.3
Reich, D.4
-
59
-
-
84863230553
-
Insights into hominid evolution from the gorilla genome sequence
-
Scally A, Dutheil JY, Hillier LW, Jordan GE, Goodhead I, Herrero J, Hobolth A, Lappalainen T, Mailund T, Marques-Bonet T, et al. 2012. Insights into hominid evolution from the gorilla genome sequence. Nature 483: 169-175.
-
(2012)
Nature
, vol.483
, pp. 169-175
-
-
Scally, A.1
Dutheil, J.Y.2
Hillier, L.W.3
Jordan, G.E.4
Goodhead, I.5
Herrero, J.6
Hobolth, A.7
Lappalainen, T.8
Mailund, T.9
Marques-Bonet, T.10
-
60
-
-
84910107464
-
Common variation near ROBO2 is associated with expressive vocabulary in infancy
-
St Pourcain B, Cents RA, Whitehouse AJ, Haworth CM, Davis OS, O'Reilly PF, Roulstone S, Wren Y, Ang QW, Velders FP, et al. 2014. Common variation near ROBO2 is associated with expressive vocabulary in infancy. Nat Commun 5: 4831.
-
(2014)
Nat Commun
, vol.5
, pp. 4831
-
-
St Pourcain, B.1
Cents, R.A.2
Whitehouse, A.J.3
Haworth, C.M.4
Davis, O.S.5
O'Reilly, P.F.6
Roulstone, S.7
Wren, Y.8
Ang, Q.W.9
Velders, F.P.10
-
61
-
-
84929624753
-
Scrm:efficiently simulating long sequences using the approximated coalescent with recombination
-
Staab PR, Zhu S, Metzler D, Lunter G.2014. Scrm:efficiently simulating long sequences using the approximated coalescent with recombination. Bioinformatics 31: 1680-1682.
-
(2014)
Bioinformatics
, vol.31
, pp. 1680-1682
-
-
Staab, P.R.1
Zhu, S.2
Metzler, D.3
Lunter, G.4
-
62
-
-
81455123144
-
Decreased expression of axon-guidance receptors in the anterior cingulate cortex in autism
-
Suda S, Iwata K, Shimmura C, Kameno Y, Anitha A, Thanseem I, Nakamura K, Matsuzaki H, Tsuchiya KJ, Sugihara G, et al. 2011. Decreased expression of axon-guidance receptors in the anterior cingulate cortex in autism. Mol Autism 2: 14.
-
(2011)
Mol Autism
, vol.2
, pp. 14
-
-
Suda, S.1
Iwata, K.2
Shimmura, C.3
Kameno, Y.4
Anitha, A.5
Thanseem, I.6
Nakamura, K.7
Matsuzaki, H.8
Tsuchiya, K.J.9
Sugihara, G.10
-
63
-
-
0024313579
-
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
-
Tajima F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595.
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
64
-
-
52149084405
-
Explaining human uniqueness: Genome interactions with environment, behaviour and culture
-
Varki A, Geschwind DH, Eichler EE. 2008. Explaining human uniqueness: genome interactions with environment, behaviour and culture. Nat Rev Genet 9: 749-763.
-
(2008)
Nat Rev Genet
, vol.9
, pp. 749-763
-
-
Varki, A.1
Geschwind, D.H.2
Eichler, E.E.3
-
65
-
-
84897583960
-
Resurrecting surviving Neandertal lineages from modern human genomes
-
Vernot B, Akey JM. 2014. Resurrecting surviving Neandertal lineages from modern human genomes. Science 343: 1017-1021.
-
(2014)
Science
, vol.343
, pp. 1017-1021
-
-
Vernot, B.1
Akey, J.M.2
-
66
-
-
84961392375
-
Excavating Neandertal and Denisovan DNA from the genomes of Melanesian individuals
-
Vernot B, Tucci S, Kelso J, Schraiber JG, Wolf AB, Gittelman RM, Dannemann M, Grote S, McCoy RC, Norton H, et al. 2016. Excavating Neandertal and Denisovan DNA from the genomes of Melanesian individuals. Science 352: 235-239.
-
(2016)
Science
, vol.352
, pp. 235-239
-
-
Vernot, B.1
Tucci, S.2
Kelso, J.3
Schraiber, J.G.4
Wolf, A.B.5
Gittelman, R.M.6
Dannemann, M.7
Grote, S.8
McCoy, R.C.9
Norton, H.10
-
68
-
-
84922669387
-
Convergent differential regulation of SLIT-ROBO axon guidance genes in the brainsof vocal learners
-
Wang R, Chen CC, Hara E, Rivas MV, Roulhac PL, Howard JT, Chakraborty M, Audet JN, Jarvis ED. 2015. Convergent differential regulation of SLIT-ROBO axon guidance genes in the brainsof vocal learners.JComp Neurol 523: 892-906.
-
(2015)
J Comp Neurol
, vol.523
, pp. 892-906
-
-
Wang, R.1
Chen, C.C.2
Hara, E.3
Rivas, M.V.4
Roulhac, P.L.5
Howard, J.T.6
Chakraborty, M.7
Audet, J.N.8
Jarvis, E.D.9
-
69
-
-
70349507632
-
The meaning of Neandertal skeletal morphology
-
Weaver TD. 2009. The meaning of Neandertal skeletal morphology. Proc Natl Acad Sci 106: 16028-16033.
-
(2009)
Proc Natl Acad Sci
, vol.106
, pp. 16028-16033
-
-
Weaver, T.D.1
-
70
-
-
84890417804
-
The genetical structure of populations
-
Wright S. 1951. The genetical structure of populations. Ann Eugen 15: 322-354.
-
(1951)
Ann Eugen
, vol.15
, pp. 322-354
-
-
Wright, S.1
-
71
-
-
84915804404
-
The projection of a test genome onto a reference population and applications to humans and archaic homi-nins
-
Yang MA, Harris K, Slatkin M. 2014. The projection of a test genome onto a reference population and applications to humans and archaic homi-nins. Genetics 198: 1655-1670.
-
(2014)
Genetics
, vol.198
, pp. 1655-1670
-
-
Ma, Y.1
Harris, K.2
Slatkin, M.3
-
72
-
-
85008601761
-
Accurate promoter and enhancer identification in 127 ENCODE and roadmap epigenomics cell types and tissues by GenoSTAN
-
Zacher B, Michel M, Schwalb B, Cramer P, Tresch A, Gagneur J. 2016. Accurate promoter and enhancer identification in 127 ENCODE and roadmap epigenomics cell types and tissues by GenoSTAN. PLoS One 12: e0169249.
-
(2016)
PLoS One
, vol.12
, pp. e0169249
-
-
Zacher, B.1
Michel, M.2
Schwalb, B.3
Cramer, P.4
Tresch, A.5
Gagneur, J.6
|