-
1
-
-
84958606331
-
Single-cell genome sequencing: Current state of the science
-
Gawad C, Koh W, Quake SR. Single-cell genome sequencing: current state of the science. Nat Rev Genet 2016; 17:175-188
-
(2016)
Nat Rev Genet
, vol.17
, pp. 175-188
-
-
Gawad, C.1
Koh, W.2
Quake, S.R.3
-
2
-
-
84940644487
-
Single-cell whole-genome amplification and sequencing: Methodology and applications
-
Huang L, Ma F, Chapman A, Lu S, Xie XS. Single-cell whole-genome amplification and sequencing: methodology and applications. Annu Rev Genomics Hum Genet 2015; 16:79-102
-
(2015)
Annu Rev Genomics Hum Genet
, vol.16
, pp. 79-102
-
-
Huang, L.1
Ma, F.2
Chapman, A.3
Lu, S.4
Xie, X.S.5
-
3
-
-
84929663446
-
Single-cell transcriptomics enters the age of mass production
-
Junker JP, van Oudenaarden A. Single-cell transcriptomics enters the age of mass production. Mol Cell 2015; 58:563-564
-
(2015)
Mol Cell
, vol.58
, pp. 563-564
-
-
Junker, J.P.1
Van Oudenaarden, A.2
-
4
-
-
84929687805
-
The technology and biology of single-cell RNA sequencing
-
Kolodziejczyk AA, Kim JK, Svensson V, Marioni JC, Teichmann SA. The technology and biology of single-cell RNA sequencing. Mol Cell 2015; 58:610-620
-
(2015)
Mol Cell
, vol.58
, pp. 610-620
-
-
Kolodziejczyk, A.A.1
Kim, J.K.2
Svensson, V.3
Marioni, J.C.4
Teichmann, S.A.5
-
5
-
-
84871447495
-
Probing meiotic recombination and aneuploidy of single sperm cells by whole-genome sequencing
-
Lu S, Zong C, Fan W, et al. Probing meiotic recombination and aneuploidy of single sperm cells by whole-genome sequencing. Science 2012; 338:1627-1630
-
(2012)
Science
, vol.338
, pp. 1627-1630
-
-
Lu, S.1
Zong, C.2
Fan, W.3
-
6
-
-
79953766940
-
Tumour evolution inferred by single-cell sequencing
-
Navin N, Kendall J, Troge J, et al. Tumour evolution inferred by single-cell sequencing. Nature 2011; 472:90-94
-
(2011)
Nature
, vol.472
, pp. 90-94
-
-
Navin, N.1
Kendall, J.2
Troge, J.3
-
7
-
-
84864258558
-
Genome-wide single- cell analysis of recombination activity and de novo mutation rates in human sperm
-
Wang J, Fan HC, Behr B, Quake SR. Genome-wide single- cell analysis of recombination activity and de novo mutation rates in human sperm. Cell 2012; 150:402-412
-
(2012)
Cell
, vol.150
, pp. 402-412
-
-
Wang, J.1
Fan, H.C.2
Behr, B.3
Quake, S.R.4
-
8
-
-
84929661801
-
Advances and applications of single-cell sequencing technologies
-
Wang Y, Navin NE. Advances and applications of single-cell sequencing technologies. Mol Cell 2015; 58:598-609
-
(2015)
Mol Cell
, vol.58
, pp. 598-609
-
-
Wang, Y.1
Navin, N.E.2
-
9
-
-
84871461434
-
Genome-wide detection of single-nucleotide and copy-number variations of a single human cell
-
Zong C, Lu S, Chapman AR, Xie XS. Genome-wide detection of single-nucleotide and copy-number variations of a single human cell. Science 2012; 338:1622-1626
-
(2012)
Science
, vol.338
, pp. 1622-1626
-
-
Zong, C.1
Lu, S.2
Chapman, A.R.3
Xie, X.S.4
-
10
-
-
84930006926
-
Multiplex single cell profiling of chromatin accessibility by combinatorial cellular indexing
-
Cusanovich DA, Daza R, Adey A, et al. Multiplex single cell profiling of chromatin accessibility by combinatorial cellular indexing. Science 2015; 348:910-914
-
(2015)
Science
, vol.348
, pp. 910-914
-
-
Cusanovich, D.A.1
Daza, R.2
Adey, A.3
-
11
-
-
84937857359
-
Single-cell chromatin accessibility reveals principles of regulatory variation
-
Buenrostro JD, Wu B, Litzenburger UM, et al. Single-cell chromatin accessibility reveals principles of regulatory variation. Nature 2015; 523:486-490
-
(2015)
Nature
, vol.523
, pp. 486-490
-
-
Buenrostro, J.D.1
Wu, B.2
Litzenburger, U.M.3
-
12
-
-
84948587544
-
Genome-wide maps of nuclear lamina interactions in single human cells
-
Kind J, Pagie L, de Vries SS, et al. Genome-wide maps of nuclear lamina interactions in single human cells. Cell 2015; 163:134-147
-
(2015)
Cell
, vol.163
, pp. 134-147
-
-
Kind, J.1
Pagie, L.2
De Vries, S.S.3
-
13
-
-
84949227165
-
Genome-wide detection of DNase i hypersensitive sites in single cells and FFPE tissue samples
-
Jin W, Tang Q, Wan M, et al. Genome-wide detection of DNase I hypersensitive sites in single cells and FFPE tissue samples. Nature 2015; 528:142-146
-
(2015)
Nature
, vol.528
, pp. 142-146
-
-
Jin, W.1
Tang, Q.2
Wan, M.3
-
14
-
-
84905030212
-
The DNA methylation landscape of human early embryos
-
Guo H, Zhu P, Yan L, et al. The DNA methylation landscape of human early embryos. Nature 2014; 511:606-610
-
(2014)
Nature
, vol.511
, pp. 606-610
-
-
Guo, H.1
Zhu, P.2
Yan, L.3
-
15
-
-
84946545109
-
Single-cell ChIP-seq reveals cell subpopulations defined by chromatin state
-
Rotem A, Ram O, Shoresh N, et al. Single-cell ChIP-seq reveals cell subpopulations defined by chromatin state. Nat Biotechnol 2015; 33:1165-1172
-
(2015)
Nat Biotechnol
, vol.33
, pp. 1165-1172
-
-
Rotem, A.1
Ram, O.2
Shoresh, N.3
-
16
-
-
84905405443
-
Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity
-
Smallwood SA, Lee HJ, Angermueller C, et al. Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity. Nat Methods 2014; 11:817-820
-
(2014)
Nat Methods
, vol.11
, pp. 817-820
-
-
Smallwood, S.A.1
Lee, H.J.2
Angermueller, C.3
-
17
-
-
84885617426
-
Single-cell Hi-C reveals cell-to-cell variability in chromosome structure
-
Nagano T, Lubling Y, Stevens TJ, et al. Single-cell Hi-C reveals cell-to-cell variability in chromosome structure. Nature 2013; 502:59-64
-
(2013)
Nature
, vol.502
, pp. 59-64
-
-
Nagano, T.1
Lubling, Y.2
Stevens, T.J.3
-
18
-
-
84924601067
-
Single-cell DNA methylome sequencing and bioinformatic inference of epigenomic cell-state dynamics
-
Farlik M, Sheffield NC, Nuzzo A, et al. Single-cell DNA methylome sequencing and bioinformatic inference of epigenomic cell-state dynamics. Cell Rep 2015; 10:1386-1397
-
(2015)
Cell Rep
, vol.10
, pp. 1386-1397
-
-
Farlik, M.1
Sheffield, N.C.2
Nuzzo, A.3
-
19
-
-
84960091878
-
Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas
-
Hou Y, Guo H, Cao C, et al. Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas. Cell Res 2016; 26:304-319
-
(2016)
Cell Res
, vol.26
, pp. 304-319
-
-
Hou, Y.1
Guo, H.2
Cao, C.3
-
20
-
-
84959255113
-
Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity
-
Angermueller C, Clark SJ, Lee HJ, et al. Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity. Nat Methods 2016; 13:229-232
-
(2016)
Nat Methods
, vol.13
, pp. 229-232
-
-
Angermueller, C.1
Clark, S.J.2
Lee, H.J.3
-
21
-
-
84924423596
-
Integrated genome and transcriptome sequencing of the same cell
-
Dey SS, Kester L, Spanjaard B, Bienko M, van Oudenaarden A. Integrated genome and transcriptome sequencing of the same cell. Nat Biotechnol 2015; 33:285-289
-
(2015)
Nat Biotechnol
, vol.33
, pp. 285-289
-
-
Dey, S.S.1
Kester, L.2
Spanjaard, B.3
Bienko, M.4
Van Oudenaarden, A.5
-
22
-
-
84954089594
-
DNA methylation dynamics in mouse preimplantation embryos revealed by mass spectrometry
-
Okamoto Y, Yoshida N, Suzuki T, et al. DNA methylation dynamics in mouse preimplantation embryos revealed by mass spectrometry. Sci Rep 2016; 6:19134
-
(2016)
Sci Rep
, vol.6
, pp. 19134
-
-
Okamoto, Y.1
Yoshida, N.2
Suzuki, T.3
-
23
-
-
84956699513
-
De novo DNA methylation drives 5hmC accumulation in mouse zygotes
-
Amouroux R, Nashun B, Shirane K, et al. De novo DNA methylation drives 5hmC accumulation in mouse zygotes. Nat Cell Biol 2016; 18:225-233
-
(2016)
Nat Cell Biol
, vol.18
, pp. 225-233
-
-
Amouroux, R.1
Nashun, B.2
Shirane, K.3
-
24
-
-
84900300766
-
Programming and inheritance of parental DNA methylomes in mammals
-
Wang L, Zhang J, Duan J, et al. Programming and inheritance of parental DNA methylomes in mammals. Cell 2014; 157:979-991
-
(2014)
Cell
, vol.157
, pp. 979-991
-
-
Wang, L.1
Zhang, J.2
Duan, J.3
-
25
-
-
84914817563
-
Active and passive demethylation of male and female pronuclear DNA in the mammalian zygote
-
Guo F, Li X, Liang D, et al. Active and passive demethylation of male and female pronuclear DNA in the mammalian zygote. Cell Stem Cell 2014; 15:447-458
-
(2014)
Cell Stem Cell
, vol.15
, pp. 447-458
-
-
Guo, F.1
Li, X.2
Liang, D.3
-
26
-
-
80053348585
-
The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes
-
Gu TP, Guo F, Yang H, et al. The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes. Nature 2011; 477:606-610
-
(2011)
Nature
, vol.477
, pp. 606-610
-
-
Gu, T.P.1
Guo, F.2
Yang, H.3
-
27
-
-
84919863433
-
Genome-wide bisulfite sequencing in zygotes identifies demethylation targets and maps the contribution of TET3 oxidation
-
Peat JR, Dean W, Clark SJ, et al. Genome-wide bisulfite sequencing in zygotes identifies demethylation targets and maps the contribution of TET3 oxidation. Cell Rep 2014; 9:1990-2000
-
(2014)
Cell Rep
, vol.9
, pp. 1990-2000
-
-
Peat, J.R.1
Dean, W.2
Clark, S.J.3
-
28
-
-
0034176639
-
Active demethylation of the paternal genome in the mouse zygote
-
Oswald J, Engemann S, Lane N, et al. Active demethylation of the paternal genome in the mouse zygote. Curr Biol 2000; 10:475-478
-
(2000)
Curr Biol
, vol.10
, pp. 475-478
-
-
Oswald, J.1
Engemann, S.2
Lane, N.3
-
29
-
-
0034598784
-
Demethylation of the zygotic paternal genome
-
Mayer W, Niveleau A, Walter J, Fundele R, Haaf T. Demethylation of the zygotic paternal genome. Nature 2000; 403:501-502
-
(2000)
Nature
, vol.403
, pp. 501-502
-
-
Mayer, W.1
Niveleau, A.2
Walter, J.3
Fundele, R.4
Haaf, T.5
-
30
-
-
84914818905
-
Tet3 and DNA replication mediate demethylation of both the maternal and paternal genomes in mouse zygotes
-
Shen L, Inoue A, He J, Liu Y, Lu F, Zhang Y. Tet3 and DNA replication mediate demethylation of both the maternal and paternal genomes in mouse zygotes. Cell Stem Cell 2014; 15:459-470
-
(2014)
Cell Stem Cell
, vol.15
, pp. 459-470
-
-
Shen, L.1
Inoue, A.2
He, J.3
Liu, Y.4
Lu, F.5
Zhang, Y.6
-
31
-
-
80054097425
-
Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos
-
Inoue A, Zhang Y. Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos. Science 2011; 334:194
-
(2011)
Science
, vol.334
, pp. 194
-
-
Inoue, A.1
Zhang, Y.2
-
32
-
-
84898892512
-
DNA methylation dynamics during epigenetic reprogramming in the germline and preimplantation embryos
-
Messerschmidt DM, Knowles BB, Solter D. DNA methylation dynamics during epigenetic reprogramming in the germline and preimplantation embryos. Genes Dev 2014; 28:812-828
-
(2014)
Genes Dev
, vol.28
, pp. 812-828
-
-
Messerschmidt, D.M.1
Knowles, B.B.2
Solter, D.3
-
33
-
-
84908205907
-
Chromatin dynamics in the regulation of cell fate allocation during early embryogenesis
-
Burton A, Torres-Padilla ME. Chromatin dynamics in the regulation of cell fate allocation during early embryogenesis. Nat Rev Mol Cell Biol 2014; 15:723-734
-
(2014)
Nat Rev Mol Cell Biol
, vol.15
, pp. 723-734
-
-
Burton, A.1
Torres-Padilla, M.E.2
-
34
-
-
84971569678
-
Establishing chromatin regulatory landscape during mouse preimplantation development
-
Lu F, Liu Y, Inoue A, Suzuki T, Zhao K, Zhang Y. Establishing chromatin regulatory landscape during mouse preimplantation development. Cell 2016; 165:1375-1388
-
(2016)
Cell
, vol.165
, pp. 1375-1388
-
-
Lu, F.1
Liu, Y.2
Inoue, A.3
Suzuki, T.4
Zhao, K.5
Zhang, Y.6
-
35
-
-
85003945031
-
The landscape of accessible chromatin in mammalian preimplantation embryos
-
Wu J, Huang B, Chen H, et al. The landscape of accessible chromatin in mammalian preimplantation embryos. Nature 2016; 534:652-657
-
(2016)
Nature
, vol.534
, pp. 652-657
-
-
Wu, J.1
Huang, B.2
Chen, H.3
-
36
-
-
84991728467
-
Resetting epigenetic memory by reprogramming of histone modifications in mammals
-
Zheng H, Huang B, Zhang B, et al. Resetting epigenetic memory by reprogramming of histone modifications in mammals. Mol Cell 2016; 63:1066-1079
-
(2016)
Mol Cell
, vol.63
, pp. 1066-1079
-
-
Zheng, H.1
Huang, B.2
Zhang, B.3
-
37
-
-
84989167936
-
Allelic reprogramming of the histone modification H3K4me3 in early mammalian development
-
Zhang B, Zheng H, Huang B, et al. Allelic reprogramming of the histone modification H3K4me3 in early mammalian development. Nature 2016; 537:553-557
-
(2016)
Nature
, vol.537
, pp. 553-557
-
-
Zhang, B.1
Zheng, H.2
Huang, B.3
-
38
-
-
84989158733
-
Broad histone H3K4me3 domains in mouse oocytes modulate maternal-to-zygotic transition
-
Dahl JA, Jung I, Aanes H, et al. Broad histone H3K4me3 domains in mouse oocytes modulate maternal-to-zygotic transition. Nature 2016; 537:548-552
-
(2016)
Nature
, vol.537
, pp. 548-552
-
-
Dahl, J.A.1
Jung, I.2
Aanes, H.3
-
39
-
-
84870552401
-
Genome-wide mapping of nucleosome positioning and DNA methylation within individual DNA molecules
-
Kelly TK, Liu Y, Lay FD, Liang G, Berman BP, Jones PA. Genome-wide mapping of nucleosome positioning and DNA methylation within individual DNA molecules. Genome Res 2012; 22:2497-2506
-
(2012)
Genome Res
, vol.22
, pp. 2497-2506
-
-
Kelly, T.K.1
Liu, Y.2
Lay, F.D.3
Liang, G.4
Berman, B.P.5
Jones, P.A.6
-
40
-
-
84927704067
-
The role of DNA methylation in directing the functional organization of the cancer epigenome
-
Lay FD, Liu Y, Kelly TK, et al. The role of DNA methylation in directing the functional organization of the cancer epigenome. Genome Res 2015; 25:467-477
-
(2015)
Genome Res
, vol.25
, pp. 467-477
-
-
Lay, F.D.1
Liu, Y.2
Kelly, T.K.3
-
41
-
-
84902596852
-
Single-cell nucleosome mapping reveals the molecular basis of gene expression heterogeneity
-
Small EC, Xi L, Wang JP, Widom J, Licht JD. Single-cell nucleosome mapping reveals the molecular basis of gene expression heterogeneity. Proc Natl Acad Sci USA 2014; 111:E2462-E2471
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, pp. E2462-E2471
-
-
Small, E.C.1
Xi, L.2
Wang, J.P.3
Widom, J.4
Licht, J.D.5
-
42
-
-
84893671693
-
Multiplex mapping of chromatin accessibility and DNA methylation within targeted single molecules identifies epigenetic heterogeneity in neural stem cells and glioblastoma
-
Nabilsi NH, Deleyrolle LP, Darst RP, Riva A, Reynolds BA, Kladde MP. Multiplex mapping of chromatin accessibility and DNA methylation within targeted single molecules identifies epigenetic heterogeneity in neural stem cells and glioblastoma. Genome Res 2014; 24:329-339
-
(2014)
Genome Res
, vol.24
, pp. 329-339
-
-
Nabilsi, N.H.1
Deleyrolle, L.P.2
Darst, R.P.3
Riva, A.4
Reynolds, B.A.5
Kladde, M.P.6
-
43
-
-
84907196865
-
Reconfiguration of nucleosome-depleted regions at distal regulatory elements accompanies DNA methylation of enhancers and insulators in cancer
-
Taberlay PC, Statham AL, Kelly TK, Clark SJ, Jones PA. Reconfiguration of nucleosome-depleted regions at distal regulatory elements accompanies DNA methylation of enhancers and insulators in cancer. Genome Res 2014; 24:1421-1432
-
(2014)
Genome Res
, vol.24
, pp. 1421-1432
-
-
Taberlay, P.C.1
Statham, A.L.2
Kelly, T.K.3
Clark, S.J.4
Jones, P.A.5
-
44
-
-
83255188897
-
Polycomb-repressed genes have permissive enhancers that initiate reprogramming
-
Taberlay PC, Kelly TK, Liu CC, et al. Polycomb-repressed genes have permissive enhancers that initiate reprogramming. Cell 2011; 147:1283-1294
-
(2011)
Cell
, vol.147
, pp. 1283-1294
-
-
Taberlay, P.C.1
Kelly, T.K.2
Liu, C.C.3
-
45
-
-
78649459828
-
Targets and dynamics of pro moter DNA methylation during early mouse development
-
Borgel J, Guibert S, Li Y, et al. Targets and dynamics of pro moter DNA methylation during early mouse development. Nat Genet 2010; 42:1093-1100
-
(2010)
Nat Genet
, vol.42
, pp. 1093-1100
-
-
Borgel, J.1
Guibert, S.2
Li, Y.3
-
46
-
-
84859910536
-
A unique regulatory phase of DNA methylation in the early mammalian embryo
-
Smith ZD, Chan MM, Mikkelsen TS, et al. A unique regulatory phase of DNA methylation in the early mammalian embryo. Nature 2012; 484:339-344
-
(2012)
Nature
, vol.484
, pp. 339-344
-
-
Smith, Z.D.1
Chan, M.M.2
Mikkelsen, T.S.3
-
47
-
-
84872078429
-
Plasticity in Dnmt3L-dependent and -independent modes of de novo methylation in the developing mouse embryo
-
Guenatri M, Duffie R, Iranzo J, Fauque P, Bourc'his D. Plasticity in Dnmt3L-dependent and -independent modes of de novo methylation in the developing mouse embryo. Development 2013; 140:562-572
-
(2013)
Development
, vol.140
, pp. 562-572
-
-
Guenatri, M.1
Duffie, R.2
Iranzo, J.3
Fauque, P.4
Bourc'His, D.5
-
48
-
-
45349108598
-
Maternal and zygotic Dnmt1 are necessary and sufficient for the maintenance of DNA methylation imprints during preimplantation development
-
Hirasawa R, Chiba H, Kaneda M, et al. Maternal and zygotic Dnmt1 are necessary and sufficient for the maintenance of DNA methylation imprints during preimplantation development. Genes Dev 2008; 22:1607-1616
-
(2008)
Genes Dev
, vol.22
, pp. 1607-1616
-
-
Hirasawa, R.1
Chiba, H.2
Kaneda, M.3
-
49
-
-
0942268864
-
Epigenetic dynamics of imprinted X inactivation during early mouse development
-
Okamoto I, Otte AP, Allis CD, Reinberg D, Heard E. Epigenetic dynamics of imprinted X inactivation during early mouse development. Science 2004; 303:644-649
-
(2004)
Science
, vol.303
, pp. 644-649
-
-
Okamoto, I.1
Otte, A.P.2
Allis, C.D.3
Reinberg, D.4
Heard, E.5
-
50
-
-
0942268867
-
Reactivation of the paternal X chromosome in early mouse embryos
-
Mak W, Nesterova TB, de Napoles M, et al. Reactivation of the paternal X chromosome in early mouse embryos. Science 2004; 303:666-669
-
(2004)
Science
, vol.303
, pp. 666-669
-
-
Mak, W.1
Nesterova, T.B.2
De Napoles, M.3
-
51
-
-
70350627509
-
Epigenetic reversion of post-implantation epiblast to pluripotent embryonic stem cells
-
Bao S, Tang F, Li X, et al. Epigenetic reversion of post-implantation epiblast to pluripotent embryonic stem cells. Nature 2009; 461:1292-1295
-
(2009)
Nature
, vol.461
, pp. 1292-1295
-
-
Bao, S.1
Tang, F.2
Li, X.3
-
52
-
-
84890526238
-
Single-cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed using reduced representation bisulfite sequencing
-
Guo H, Zhu P, Wu X, Li X, Wen L, Tang F. Single-cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed using reduced representation bisulfite sequencing. Genome Res 2013; 23:2126-2135
-
(2013)
Genome Res
, vol.23
, pp. 2126-2135
-
-
Guo, H.1
Zhu, P.2
Wu, X.3
Li, X.4
Wen, L.5
Tang, F.6
-
53
-
-
84930613577
-
The transcriptome and DNA methylome landscapes of human primordial germ cells
-
Guo F, Yan L, Guo H, et al. The transcriptome and DNA methylome landscapes of human primordial germ cells. Cell 2015; 161:1437-1452
-
(2015)
Cell
, vol.161
, pp. 1437-1452
-
-
Guo, F.1
Yan, L.2
Guo, H.3
-
54
-
-
79957868920
-
Bismark: A flexible aligner and methylation caller for Bisulfite-Seq applications
-
Krueger F, Andrews SR. Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications. Bioinformatics 2011; 27:1571-1572
-
(2011)
Bioinformatics
, vol.27
, pp. 1571-1572
-
-
Krueger, F.1
Andrews, S.R.2
-
55
-
-
68549104404
-
The sequence alignment/ map format and SAMtools
-
Li H, Handsaker B, Wysoker A, et al. The sequence alignment/ map format and SAMtools. Bioinformatics 2009; 25:2078-2079
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
-
56
-
-
84867164956
-
Integrative analysis of genome- wide loss of heterozygosity and monoallelic expression at nucleotide resolution reveals disrupted pathways in triple- negative breast cancer
-
Ha G, Roth A, Lai D, et al. Integrative analysis of genome- wide loss of heterozygosity and monoallelic expression at nucleotide resolution reveals disrupted pathways in triple- negative breast cancer. Genome Res 2012; 22:1995-2007
-
(2012)
Genome Res
, vol.22
, pp. 1995-2007
-
-
Ha, G.1
Roth, A.2
Lai, D.3
-
57
-
-
84911462077
-
A comparative encyclopedia of DNA elements in the mouse genome
-
Yue F, Cheng Y, Breschi A, et al. A comparative encyclopedia of DNA elements in the mouse genome. Nature 2014; 515:355-364
-
(2014)
Nature
, vol.515
, pp. 355-364
-
-
Yue, F.1
Cheng, Y.2
Breschi, A.3
-
58
-
-
75649092667
-
Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis
-
Hiratani I, Ryba T, Itoh M, et al. Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis. Genome Res 2010; 20:155-169
-
(2010)
Genome Res
, vol.20
, pp. 155-169
-
-
Hiratani, I.1
Ryba, T.2
Itoh, M.3
-
59
-
-
54949085778
-
Global reorganization of replication domains during embryonic stem cell differentiation
-
Hiratani I, Ryba T, Itoh M, et al. Global reorganization of replication domains during embryonic stem cell differentiation. PLoS Biol 2008; 6:e245
-
(2008)
PLoS Biol
, vol.6
, pp. e245
-
-
Hiratani, I.1
Ryba, T.2
Itoh, M.3
-
60
-
-
84911478490
-
Topologically associating domains are stable units of replication-timing regulation
-
Pope BD, Ryba T, Dileep V, et al. Topologically associating domains are stable units of replication-timing regulation. Nature 2014; 515:402-405
-
(2014)
Nature
, vol.515
, pp. 402-405
-
-
Pope, B.D.1
Ryba, T.2
Dileep, V.3
-
61
-
-
84892179132
-
Single-cell RNA-seq reveals dynamic, random monoallelic gene expression in mammalian cells
-
Deng Q, Ramskold D, Reinius B, Sandberg R. Single-cell RNA-seq reveals dynamic, random monoallelic gene expression in mammalian cells. Science 2014; 343:193-196
-
(2014)
Science
, vol.343
, pp. 193-196
-
-
Deng, Q.1
Ramskold, D.2
Reinius, B.3
Sandberg, R.4
-
62
-
-
84961775163
-
Heterogeneity in Oct4 and Sox2 targets biases cell fate in 4-cell mouse embryos
-
Goolam M, Scialdone A, Graham SJ, et al. Heterogeneity in Oct4 and Sox2 targets biases cell fate in 4-cell mouse embryos. Cell 2016; 165:61-74
-
(2016)
Cell
, vol.165
, pp. 61-74
-
-
Goolam, M.1
Scialdone, A.2
Graham, S.J.3
|