메뉴 건너뛰기




Volumn 7, Issue , 2017, Pages

Efficient and rapid generation of large genomic variants in rats and mice using CRISMERE

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; GENE EDITING; GENE REARRANGEMENT; MOUSE; PROCEDURES; RAT; TIME FACTOR; TRANSGENIC ANIMAL;

EID: 85014746979     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep43331     Document Type: Article
Times cited : (58)

References (50)
  • 1
    • 67651036860 scopus 로고    scopus 로고
    • Aneuploidy: From a physiological mechanism of variance to Down syndrome
    • Dierssen, M., Herault, Y., Estivill, X. Aneuploidy: from a physiological mechanism of variance to Down syndrome. Physiol Rev 89, 887-920 (2009).
    • (2009) Physiol Rev , vol.89 , pp. 887-920
    • Dierssen, M.1    Herault, Y.2    Estivill, X.3
  • 3
    • 84958554874 scopus 로고    scopus 로고
    • Genetic dissection of Down syndrome-associated congenital heart defects using a new mouse mapping panel
    • Lana-Elola, E., et al. Genetic dissection of Down syndrome-associated congenital heart defects using a new mouse mapping panel. Elife 5 (2016).
    • (2016) Elife , vol.5
    • Lana-Elola, E.1
  • 4
    • 84926306807 scopus 로고    scopus 로고
    • Opposite phenotypes of muscle strength and locomotor function in mouse models of partial trisomy and monosomy 21 for the proximal Hspa13-App region
    • Brault, V., et al. Opposite phenotypes of muscle strength and locomotor function in mouse models of partial trisomy and monosomy 21 for the proximal Hspa13-App region. PLoS Genet 11, e1005062 (2015).
    • (2015) PLoS Genet , vol.11 , pp. 1005062
    • Brault, V.1
  • 5
    • 84948992427 scopus 로고    scopus 로고
    • Genetic dissection of the Down syndrome critical region
    • Jiang, X., et al. Genetic dissection of the Down syndrome critical region. Hum Mol Genet (2015).
    • (2015) Hum Mol Genet
    • Jiang, X.1
  • 6
    • 7444231620 scopus 로고    scopus 로고
    • A chromosome 21 critical region does not cause specific Down syndrome phenotypes
    • Olson, L. E., Richtsmeier, J. T., Leszl, J., Reeves, R. H. A chromosome 21 critical region does not cause specific Down syndrome phenotypes. Science 306, 687-690 (2004).
    • (2004) Science , vol.306 , pp. 687-690
    • Olson, L.E.1    Richtsmeier, J.T.2    Leszl, J.3    Reeves, R.H.4
  • 7
    • 1842717955 scopus 로고    scopus 로고
    • Automated whole-genome multiple alignment of rat, mouse, human
    • Brudno, M., et al. Automated whole-genome multiple alignment of rat, mouse, human. Genome Res 14, 685-692 (2004).
    • (2004) Genome Res , vol.14 , pp. 685-692
    • Brudno, M.1
  • 8
    • 6344222248 scopus 로고    scopus 로고
    • Human, mouse, rat genome large-scale rearrangements: Stability versus speciation
    • Zhao, S., et al. Human, mouse, rat genome large-scale rearrangements: stability versus speciation. Genome Res 14, 1851-1860 (2004).
    • (2004) Genome Res , vol.14 , pp. 1851-1860
    • Zhao, S.1
  • 9
    • 2942589207 scopus 로고    scopus 로고
    • Insights from the rat genome sequence
    • Mullins, L. J., Mullins, J. J. Insights from the rat genome sequence. Genome Biol 5, 221 (2004).
    • (2004) Genome Biol , vol.5 , pp. 221
    • Mullins, L.J.1    Mullins, J.J.2
  • 10
    • 84884191657 scopus 로고    scopus 로고
    • Rat Genome Database: A unique resource for rat, human, mouse quantitative trait locus data
    • Nigam, R., et al. Rat Genome Database: a unique resource for rat, human, mouse quantitative trait locus data. Physiol Genomics 45, 809-816 (2013).
    • (2013) Physiol Genomics , vol.45 , pp. 809-816
    • Nigam, R.1
  • 11
    • 84892466245 scopus 로고    scopus 로고
    • Human chromosome 21 orthologous region on mouse chromosome 17 is a major determinant of Down syndromerelated developmental cognitive deficits
    • Zhang, L., et al. Human chromosome 21 orthologous region on mouse chromosome 17 is a major determinant of Down syndromerelated developmental cognitive deficits. Hum Mol Genet 23, 578-589 (2014).
    • (2014) Hum Mol Genet , vol.23 , pp. 578-589
    • Zhang, L.1
  • 12
    • 33746659123 scopus 로고    scopus 로고
    • Modeling chromosomes in mouse to explore the function of genes, genomic disorders, chromosomal organization
    • Brault, V., Pereira, P., Duchon, A., Herault, Y. Modeling chromosomes in mouse to explore the function of genes, genomic disorders, chromosomal organization. PLoS Genet 2, e86 (2006).
    • (2006) PLoS Genet , vol.2 , pp. e86
    • Brault, V.1    Pereira, P.2    Duchon, A.3    Herault, Y.4
  • 14
    • 0031770816 scopus 로고    scopus 로고
    • Engineering chromosomes in mice through targeted meiotic recombination (TAMERE)
    • Herault, Y., Rassoulzadegan, M., Cuzin, F., Duboule, D. Engineering chromosomes in mice through targeted meiotic recombination (TAMERE). Nat Genet 20, 381-384 (1998).
    • (1998) Nat Genet , vol.20 , pp. 381-384
    • Herault, Y.1    Rassoulzadegan, M.2    Cuzin, F.3    Duboule, D.4
  • 15
    • 0029562967 scopus 로고
    • Chromosome engineering in mice
    • Ramirez-Solis, R., Liu, P., Bradley, A. Chromosome engineering in mice. Nature 378, 720-724 (1995).
    • (1995) Nature , vol.378 , pp. 720-724
    • Ramirez-Solis, R.1    Liu, P.2    Bradley, A.3
  • 16
    • 0033152654 scopus 로고    scopus 로고
    • A system for rapid generation of coat color-tagged knockouts and defined chromosomal rearrangements in mice
    • Zheng, B., Mills, A. A., Bradley, A. A system for rapid generation of coat color-tagged knockouts and defined chromosomal rearrangements in mice. Nucleic Acids Res 27, 2354-2360 (1999).
    • (1999) Nucleic Acids Res , vol.27 , pp. 2354-2360
    • Zheng, B.1    Mills, A.A.2    Bradley, A.3
  • 17
    • 3543035792 scopus 로고    scopus 로고
    • Mutagenic insertion and chromosome engineering resource (MICER)
    • Adams, D. J., et al. Mutagenic insertion and chromosome engineering resource (MICER). Nat Genet 36, 867-871 (2004).
    • (2004) Nat Genet , vol.36 , pp. 867-871
    • Adams, D.J.1
  • 18
    • 79953176250 scopus 로고    scopus 로고
    • Large-scale analysis of the regulatory architecture of the mouse genome with a transposon-associated sensor
    • Ruf, S., et al. Large-scale analysis of the regulatory architecture of the mouse genome with a transposon-associated sensor. Nature Genetics 43, 379-386 (2011).
    • (2011) Nature Genetics , vol.43 , pp. 379-386
    • Ruf, S.1
  • 19
    • 23044477774 scopus 로고    scopus 로고
    • Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes
    • Spitz, F., Herkenne, C., Morris, M. A., Duboule, D. Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet 37, 889-893 (2005).
    • (2005) Nat Genet , vol.37 , pp. 889-893
    • Spitz, F.1    Herkenne, C.2    Morris, M.A.3    Duboule, D.4
  • 20
    • 84938932957 scopus 로고    scopus 로고
    • Efficient inversions and duplications of mammalian regulatory DNA elements and gene clusters by CRISPR/Cas9
    • Li, J., et al. Efficient inversions and duplications of mammalian regulatory DNA elements and gene clusters by CRISPR/Cas9. J Mol Cell Biol 7, 284-298 (2015).
    • (2015) J Mol Cell Biol , vol.7 , pp. 284-298
    • Li, J.1
  • 21
    • 84949211352 scopus 로고    scopus 로고
    • Large genomic fragment deletion and functional gene cassette knock-in via Cas9 protein mediated genome editing in one-cell rodent embryos
    • Wang, L., et al. Large genomic fragment deletion and functional gene cassette knock-in via Cas9 protein mediated genome editing in one-cell rodent embryos. Scientific Reports 5, 17517 (2015).
    • (2015) Scientific Reports , vol.5 , pp. 17517
    • Wang, L.1
  • 22
    • 84925679860 scopus 로고    scopus 로고
    • Large genomic fragment deletions and insertions in mouse using CRISPR/Cas9
    • Zhang, L., et al. Large genomic fragment deletions and insertions in mouse using CRISPR/Cas9. PLoS One 10, e0120396 (2015).
    • (2015) PLoS One , vol.10 , pp. 0120396
    • Zhang, L.1
  • 23
    • 84923384373 scopus 로고    scopus 로고
    • Deletions, inversions, duplications: Engineering of structural variants using CRISPR/Cas in Mice
    • 833-339
    • Kraft, K., et al. Deletions, Inversions, Duplications: Engineering of Structural Variants using CRISPR/Cas in Mice. Cell Rep 10, 833-339 (2015).
    • (2015) Cell Rep , vol.10
    • Kraft, K.1
  • 24
    • 84959375643 scopus 로고    scopus 로고
    • Chromosome engineering in zygotes with CRISPR/Cas9
    • Boroviak, K., Doe, B., Banerjee, R., Yang, F., Bradley, A. Chromosome engineering in zygotes with CRISPR/Cas9. Genesis 54, 78-85 (2016).
    • (2016) Genesis , vol.54 , pp. 78-85
    • Boroviak, K.1    Doe, B.2    Banerjee, R.3    Yang, F.4    Bradley, A.5
  • 25
    • 70450161234 scopus 로고    scopus 로고
    • A new mouse model for the trisomy of the Abcg1-U2af1 region reveals the complexity of the combinatorial genetic code of down syndrome
    • Lopes Pereira, P., et al. A new mouse model for the trisomy of the Abcg1-U2af1 region reveals the complexity of the combinatorial genetic code of down syndrome. Hum Mol Genet 18, 4756-4769 (2009).
    • (2009) Hum Mol Genet , vol.18 , pp. 4756-4769
    • Lopes Pereira, P.1
  • 26
    • 79251627273 scopus 로고    scopus 로고
    • Effects of individual segmental trisomies of human chromosome 21 syntenic regions on hippocampal long-term potentiation and cognitive behaviors in mice
    • Yu, T., et al. Effects of individual segmental trisomies of human chromosome 21 syntenic regions on hippocampal long-term potentiation and cognitive behaviors in mice. Brain Research 1366, 162-171 (2010).
    • (2010) Brain Research , vol.1366 , pp. 162-171
    • Yu, T.1
  • 27
    • 0028937163 scopus 로고
    • Mice deficient in cystathionine beta-synthase: Animal models for mild and severe homocyst(e)inemia
    • Watanabe, M., et al. Mice deficient in cystathionine beta-synthase: animal models for mild and severe homocyst(e)inemia. Proc Natl Acad Sci USA 92, 1585-1589 (1995).
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 1585-1589
    • Watanabe, M.1
  • 28
    • 84893373889 scopus 로고    scopus 로고
    • Epigallocatechin-3-gallate, a DYRK1A inhibitor, rescues cognitive deficits in Down syndrome mouse models and in humans
    • De la Torre, R., et al. Epigallocatechin-3-gallate, a DYRK1A inhibitor, rescues cognitive deficits in Down syndrome mouse models and in humans. Mol Nutr Food Res 58, 278-288 (2014).
    • (2014) Mol Nutr Food Res , vol.58 , pp. 278-288
    • De La Torre, R.1
  • 29
    • 84959187568 scopus 로고    scopus 로고
    • Case report of novel DYRK1A mutations in 2 individuals with syndromic intellectual disability and a review of the literature
    • Luco, S. M., et al. Case report of novel DYRK1A mutations in 2 individuals with syndromic intellectual disability and a review of the literature. BMC Med Genet 17, 15 (2016).
    • (2016) BMC Med Genet , vol.17 , pp. 15
    • Luco, S.M.1
  • 30
    • 84944351589 scopus 로고    scopus 로고
    • Ten new cases further delineate the syndromic intellectual disability phenotype caused by mutations in DYRK1A
    • Bronicki, L. M., et al. Ten new cases further delineate the syndromic intellectual disability phenotype caused by mutations in DYRK1A. Eur J Hum Genet 23, 1482-1487 (2015).
    • (2015) Eur J Hum Genet , vol.23 , pp. 1482-1487
    • Bronicki, L.M.1
  • 31
    • 84951908030 scopus 로고    scopus 로고
    • Disruptive de novo mutations of DYRK1A lead to a syndromic form of autism and ID
    • van Bon, B. W., et al. Disruptive de novo mutations of DYRK1A lead to a syndromic form of autism and ID. Mol Psychiatry 21, 26-32 (2016).
    • (2016) Mol Psychiatry , vol.21 , pp. 26-32
    • Van Bon, B.W.1
  • 32
    • 43049162678 scopus 로고    scopus 로고
    • Truncation of the Down syndrome candidate gene DYRK1A in two unrelated patients with microcephaly
    • Møller, R. S., et al. Truncation of the Down syndrome candidate gene DYRK1A in two unrelated patients with microcephaly. Am J Hum Genet 82, 1165-1170 (2008).
    • (2008) Am J Hum Genet , vol.82 , pp. 1165-1170
    • Møller, R.S.1
  • 33
    • 84858156775 scopus 로고    scopus 로고
    • DYRK1A: A master regulatory protein controlling brain growth
    • Guedj, F., et al. DYRK1A: a master regulatory protein controlling brain growth. Neurobiol Dis 46, 190-203 (2012).
    • (2012) Neurobiol Dis , vol.46 , pp. 190-203
    • Guedj, F.1
  • 34
    • 0035445736 scopus 로고    scopus 로고
    • Neurodevelopmental delay, motor abnormalities and cognitive deficits in transgenic mice overexpressing Dyrk1A (minibrain), a murine model of Down's syndrome
    • Altafaj, X., et al. Neurodevelopmental delay, motor abnormalities and cognitive deficits in transgenic mice overexpressing Dyrk1A (minibrain), a murine model of Down's syndrome. Hum Mol Genet 10, 1915-1923 (2001).
    • (2001) Hum Mol Genet , vol.10 , pp. 1915-1923
    • Altafaj, X.1
  • 35
    • 0036724569 scopus 로고    scopus 로고
    • Dyrk1A haploinsufficiency affects viability and causes developmental delay and abnormal brain morphology in mice
    • Fotaki, V., et al. Dyrk1A haploinsufficiency affects viability and causes developmental delay and abnormal brain morphology in mice. Mol Cell Biol 22, 6636-6647 (2002).
    • (2002) Mol Cell Biol , vol.22 , pp. 6636-6647
    • Fotaki, V.1
  • 36
    • 24044530911 scopus 로고    scopus 로고
    • Alterations in the phenotype of neocortical pyramidal cells in the Dyrk1A+/mouse
    • Benavides-Piccione, R., et al. Alterations in the phenotype of neocortical pyramidal cells in the Dyrk1A+/? mouse. Neurobiol Dis 20, 115-122 (2005).
    • (2005) Neurobiol Dis , vol.20 , pp. 115-122
    • Benavides-Piccione, R.1
  • 37
    • 3242816217 scopus 로고    scopus 로고
    • Haploinsufficiency of Dyrk1A in mice leads to specific alterations in the development and regulation of motor activity
    • Fotaki, V., Martinez De Lagran, M., Estivill, X., Arbones, M., Dierssen, M. Haploinsufficiency of Dyrk1A in mice leads to specific alterations in the development and regulation of motor activity. Behav Neurosci 118, 815-821 (2004).
    • (2004) Behav Neurosci , vol.118 , pp. 815-821
    • Fotaki, V.1    Martinez De Lagran, M.2    Estivill, X.3    Arbones, M.4    Dierssen, M.5
  • 38
    • 49749143326 scopus 로고    scopus 로고
    • Impaired spatial learning strategies and novel object recognition in mice haploinsufficient for the dual specificity tyrosine-regulated kinase-1A (Dyrk1A)
    • Arque, G., et al. Impaired spatial learning strategies and novel object recognition in mice haploinsufficient for the dual specificity tyrosine-regulated kinase-1A (Dyrk1A). PLoS One 3, e2575 (2008).
    • (2008) PLoS One , vol.3 , pp. 2575
    • Arque, G.1
  • 39
    • 34447331007 scopus 로고    scopus 로고
    • Duplication of the entire 22, 9 Mb human chromosome 21 syntenic region on mouse chromosome 16 causes cardiovascular and gastrointestinal abnormalities
    • Li, Z., et al. Duplication of the entire 22. 9 Mb human chromosome 21 syntenic region on mouse chromosome 16 causes cardiovascular and gastrointestinal abnormalities. Hum Mol Genet 16, 1359-1366 (2007).
    • (2007) Hum Mol Genet , vol.16 , pp. 1359-1366
    • Li, Z.1
  • 40
    • 84881287170 scopus 로고    scopus 로고
    • HMGN1 modulates nucleosome occupancy and DNase i hypersensitivity at the CpG island promoters of embryonic stem cells
    • Deng, T., et al. HMGN1 modulates nucleosome occupancy and DNase I hypersensitivity at the CpG island promoters of embryonic stem cells. Mol Cell Biol 33, 3377-3389 (2013).
    • (2013) Mol Cell Biol , vol.33 , pp. 3377-3389
    • Deng, T.1
  • 41
    • 84901651797 scopus 로고    scopus 로고
    • Triplication of a 21q22 region contributes to B cell transformation through HMGN1 overexpression and loss of histone H3 Lys27 trimethylation
    • Lane, A. A., et al. Triplication of a 21q22 region contributes to B cell transformation through HMGN1 overexpression and loss of histone H3 Lys27 trimethylation. Nat Genet 46, 618-623 (2014).
    • (2014) Nat Genet , vol.46 , pp. 618-623
    • Lane, A.A.1
  • 42
    • 0037142034 scopus 로고    scopus 로고
    • Mice deficient in the Rac activator Tiam1 are resistant to Ras-induced skin tumours
    • Malliri, A., et al. Mice deficient in the Rac activator Tiam1 are resistant to Ras-induced skin tumours. Nature 417, 867-871 (2002).
    • (2002) Nature , vol.417 , pp. 867-871
    • Malliri, A.1
  • 43
    • 22144447520 scopus 로고    scopus 로고
    • Loss of Runx1 perturbs adult hematopoiesis and is associated with a myeloproliferative phenotype
    • Growney, J. D., et al. Loss of Runx1 perturbs adult hematopoiesis and is associated with a myeloproliferative phenotype. Blood 106, 494-504 (2005).
    • (2005) Blood , vol.106 , pp. 494-504
    • Growney, J.D.1
  • 44
    • 34347337601 scopus 로고    scopus 로고
    • Toward simpler and faster genome-wide mutagenesis in mice
    • Wu, S., Ying, G., Wu, Q., Capecchi, M. R. Toward simpler and faster genome-wide mutagenesis in mice. Nat Genet 39, 922-930 (2007).
    • (2007) Nat Genet , vol.39 , pp. 922-930
    • Wu, S.1    Ying, G.2    Wu, Q.3    Capecchi, M.R.4
  • 45
    • 84863275797 scopus 로고    scopus 로고
    • Targeted chromosomal duplications and inversions in the human genome using zinc finger nucleases
    • Lee, H. J., Kweon, J., Kim, E., Kim, S., Kim, J. S. Targeted chromosomal duplications and inversions in the human genome using zinc finger nucleases. Genome Res 22, 539-548 (2012).
    • (2012) Genome Res , vol.22 , pp. 539-548
    • Lee, H.J.1    Kweon, J.2    Kim, E.3    Kim, S.4    Kim, J.S.5
  • 46
    • 84878731165 scopus 로고    scopus 로고
    • Targeted chromosomal deletions and inversions in zebrafish
    • Gupta, A., et al. Targeted chromosomal deletions and inversions in zebrafish. Genome Res 23, 1008-1017 (2013).
    • (2013) Genome Res , vol.23 , pp. 1008-1017
    • Gupta, A.1
  • 47
    • 55849107789 scopus 로고    scopus 로고
    • Tandemly arrayed genes in vertebrate genomes
    • Pan, D., Zhang, L. Tandemly arrayed genes in vertebrate genomes. Comp Funct Genomics, 545269 (2008).
    • (2008) Comp Funct Genomics , vol.545 , pp. 269
    • Pan, D.1    Zhang, L.2
  • 48
    • 56049084685 scopus 로고    scopus 로고
    • Inducing segmental aneuploid mosaicism in the mouse through targeted asymmetric sister chromatid event of recombination
    • Duchon, A., Besson, V., Pereira, P. L., Magnol, L., Herault, Y. Inducing segmental aneuploid mosaicism in the mouse through targeted asymmetric sister chromatid event of recombination. Genetics 180, 51-59 (2008).
    • (2008) Genetics , vol.180 , pp. 51-59
    • Duchon, A.1    Besson, V.2    Pereira, P.L.3    Magnol, L.4    Herault, Y.5
  • 49
    • 78650011254 scopus 로고    scopus 로고
    • Controlled somatic and germline copy number variation in the mouse model
    • Herault, Y., et al. Controlled somatic and germline copy number variation in the mouse model. Curr Genomics 11, 470-480 (2010).
    • (2010) Curr Genomics , vol.11 , pp. 470-480
    • Herault, Y.1
  • 50
    • 84959154058 scopus 로고    scopus 로고
    • Engineering microdeletions and microduplications by targeting segmental duplications with CRISPR
    • Tai, D. J., et al. Engineering microdeletions and microduplications by targeting segmental duplications with CRISPR. Nat Neurosci 17 517-522 (2016).
    • (2016) Nat Neurosci , vol.17 , pp. 517-522
    • Tai, D.J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.