메뉴 건너뛰기




Volumn 14, Issue 10 A, 2004, Pages 1851-1860

Human, mouse, and rat genome large-scale rearrangements: Stability versus speciation

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; CENTROMERE; CHROMOSOME REARRANGEMENT; CHROMOSOME STRUCTURE; CONTROLLED STUDY; FREQUENCY ANALYSIS; GENE CONSTRUCT; GENE IDENTIFICATION; GENE MAPPING; GENE REARRANGEMENT; GENE SEQUENCE; GENETIC STABILITY; GENETIC VARIABILITY; HUMAN; MAMMAL; MOUSE; NONHUMAN; PRIORITY JOURNAL; RAT; SEQUENCE ANALYSIS; SPECIES COMPARISON; SPECIES DIFFERENTIATION; SYNTENY;

EID: 6344222248     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.2663304     Document Type: Article
Times cited : (119)

References (62)
  • 1
    • 0036783383 scopus 로고    scopus 로고
    • Neocentromeres: Role in human disease, evolution, and centromere study
    • Amor, D.J. and Choo, K.H. 2002. Neocentromeres: Role in human disease, evolution, and centromere study. Am. J. Hum. Genet. 71: 695-714.
    • (2002) Am. J. Hum. Genet. , vol.71 , pp. 695-714
    • Amor, D.J.1    Choo, K.H.2
  • 2
    • 1842768393 scopus 로고    scopus 로고
    • Reconstructing the genomic architecture of ancestral mammals: Lessons from human, mouse, and rat genomes
    • Bourque, G., Pevzner, P.A., and Tesler, G. 2004. Reconstructing the genomic architecture of ancestral mammals: Lessons from human, mouse, and rat genomes. Genome Res. 14: 507-516.
    • (2004) Genome Res. , vol.14 , pp. 507-516
    • Bourque, G.1    Pevzner, P.A.2    Tesler, G.3
  • 8
    • 0042027896 scopus 로고    scopus 로고
    • Structural dynamics of eukaryotic chromosome evolution
    • Eichler, E.E. and Sankoff, D. 2003. Structural dynamics of eukaryotic chromosome evolution. Science i ] 301: 793-797.
    • (2003) Science , vol.301 , pp. 793-797
    • Eichler, E.E.1    Sankoff, D.2
  • 9
    • 0036852244 scopus 로고    scopus 로고
    • Gene content and function of the ancestral chromosome fusion site in human chromosome 2q13-2q14.1 and paralogous regions
    • Fan, Y., Newman, T., Linardopoulou, E., and Trask, B.J. 2002. Gene content and function of the ancestral chromosome fusion site in human chromosome 2q13-2q14.1 and paralogous regions. Genome Res. 12: 1663-1672.
    • (2002) Genome Res. , vol.12 , pp. 1663-1672
    • Fan, Y.1    Newman, T.2    Linardopoulou, E.3    Trask, B.J.4
  • 12
    • 0037118065 scopus 로고    scopus 로고
    • Centromeres: Selfish drivers
    • Henikoff, S. and Malik, H.S. 2002. Centromeres: Selfish drivers. Nature 417: 227.
    • (2002) Nature , vol.417 , pp. 227
    • Henikoff, S.1    Malik, H.S.2
  • 13
    • 0035839066 scopus 로고    scopus 로고
    • The centromere paradox: Stable inheritance with rapidly evolving DNA
    • Henikoff, S., Ahmad, K., and Malik, H.S. 2001. The centromere paradox: Stable inheritance with rapidly evolving DNA. Science i ] 293: 1098-1102.
    • (2001) Science , vol.293 , pp. 1098-1102
    • Henikoff, S.1    Ahmad, K.2    Malik, H.S.3
  • 16
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • International Human Genome Sequencing Consortium
    • International Human Genome Sequencing Consortium. 2001. Initial sequencing and analysis of the human genome. Nature 409: 860-921.
    • (2001) Nature , vol.409 , pp. 860-921
  • 17
    • 0344153498 scopus 로고    scopus 로고
    • Duplicate, decouple, disperse: The evolutionary transience of human centromeric regions
    • Jackson, M. 2003. Duplicate, decouple, disperse: The evolutionary transience of human centromeric regions. Curr. Opin. Genet. Dev. 13: 629-635.
    • (2003) Curr. Opin. Genet. Dev. , vol.13 , pp. 629-635
    • Jackson, M.1
  • 18
    • 0032928889 scopus 로고    scopus 로고
    • Sequences flanking the centromere of human chromosome 10 are a complex patchwork of arm-specific sequences, stable duplications and unstable sequences with homologies to telomeric and other centromeric locations
    • Jackson, M.S., Rocchi, M., Thompson, G., Hearn, T., Crosier, M., Guy, J., Kirk, D., Mulligan, L., Ricco, A., Piccininni, S., et al. 1999. Sequences flanking the centromere of human chromosome 10 are a complex patchwork of arm-specific sequences, stable duplications and unstable sequences with homologies to telomeric and other centromeric locations. Hum. Mol. Genet. 8: 205-215.
    • (1999) Hum. Mol. Genet. , vol.8 , pp. 205-215
    • Jackson, M.S.1    Rocchi, M.2    Thompson, G.3    Hearn, T.4    Crosier, M.5    Guy, J.6    Kirk, D.7    Mulligan, L.8    Ricco, A.9    Piccininni, S.10
  • 19
    • 1842667856 scopus 로고    scopus 로고
    • Pash: Efficient genome-scale sequence anchoring by positional hashing
    • Kalafus, K.J., Jackson, A.R., and Milosavljevic, A. 2004. Pash: Efficient genome-scale sequence anchoring by positional hashing. Genome Res. 14: 672-678.
    • (2004) Genome Res. , vol.14 , pp. 672-678
    • Kalafus, K.J.1    Jackson, A.R.2    Milosavljevic, A.3
  • 20
    • 0141815478 scopus 로고    scopus 로고
    • Evolution's cauldron: Duplication, deletion, and rearrangement in the mouse and human genomes
    • Kent, W.J., Baertsch, R., Hinrichs, A., Miller, W., and Haussler, D. 2003. Evolution's cauldron: Duplication, deletion, and rearrangement in the mouse and human genomes. Proc. Natl. Acad. Sci. 100: 11484-11489.
    • (2003) Proc. Natl. Acad. Sci. , vol.100 , pp. 11484-11489
    • Kent, W.J.1    Baertsch, R.2    Hinrichs, A.3    Miller, W.4    Haussler, D.5
  • 23
    • 0036202921 scopus 로고    scopus 로고
    • PatternHunter: Faster and more sensitive homology search
    • Ma, B., Tromp, J., and Li, M. 2002. PatternHunter: Faster and more sensitive homology search. Bioinformatics 18: 440-445.
    • (2002) Bioinformatics , vol.18 , pp. 440-445
    • Ma, B.1    Tromp, J.2    Li, M.3
  • 25
    • 0036889219 scopus 로고    scopus 로고
    • Conflict begets complexity: The evolution of centromeres
    • Malik, H.S. and Henikoff, S. 2002. Conflict begets complexity: The evolution of centromeres. Curr. Opin. Genet. Dev. 12: 711-718.
    • (2002) Curr. Opin. Genet. Dev. , vol.12 , pp. 711-718
    • Malik, H.S.1    Henikoff, S.2
  • 28
    • 0034912229 scopus 로고    scopus 로고
    • Evolution of mammalian genome organization inferred from comparative gene mapping
    • REVIEWS0005
    • Murphy, W.J., Stanyon, R., and O'Brien, S.J. 2001. Evolution of mammalian genome organization inferred from comparative gene mapping. Genome Biol. 2: REVIEWS0005.
    • (2001) Genome Biol. , vol.2
    • Murphy, W.J.1    Stanyon, R.2    O'Brien, S.J.3
  • 29
    • 0042525766 scopus 로고    scopus 로고
    • The origin of human chromosome 1 and its homologs in placental mammals
    • Murphy, W.J., Fronicke, L., O'Brien, S.J., and Stanyon, R. 2003. The origin of human chromosome 1 and its homologs in placental mammals. Genome Res. 13: 1880-1888.
    • (2003) Genome Res. , vol.13 , pp. 1880-1888
    • Murphy, W.J.1    Fronicke, L.2    O'Brien, S.J.3    Stanyon, R.4
  • 30
    • 0032401050 scopus 로고    scopus 로고
    • Counting; on comparative maps
    • Nadeau, J.H. and Sankoff, D. 1998. Counting on comparative maps. Trends Genet. 14: 495-501.
    • (1998) Trends Genet. , vol.14 , pp. 495-501
    • Nadeau, J.H.1    Sankoff, D.2
  • 31
    • 0000791476 scopus 로고
    • Lengths of chromosomal segments conserved since divergence of man and mouse
    • Nadeau, J.H. and Taylor, B.A. 1984. Lengths of chromosomal segments conserved since divergence of man and mouse. Proc. Natl. Acad. Sci. 81: 814-818.
    • (1984) Proc. Natl. Acad. Sci. , vol.81 , pp. 814-818
    • Nadeau, J.H.1    Taylor, B.A.2
  • 32
    • 0035874969 scopus 로고    scopus 로고
    • Rat-mouse and rat-human comparative maps based on gene homology and high-resolution zoo-FISH
    • Nilsson, S., Helou, K., Walentinsson, A., Szpirer, C., Nerman, O., and Stahl, F. 2001. Rat-mouse and rat-human comparative maps based on gene homology and high-resolution zoo-FISH. Genomics 74: 287-298.
    • (2001) Genomics , vol.74 , pp. 287-298
    • Nilsson, S.1    Helou, K.2    Walentinsson, A.3    Szpirer, C.4    Nerman, O.5    Stahl, F.6
  • 34
    • 0035933594 scopus 로고    scopus 로고
    • Genomics. On choosing mammalian genomes for sequencing
    • O'Brien, S.J., Eizirik, E., and Murphy, W.J. 2001. Genomics. On choosing mammalian genomes for sequencing. Science i ] 292: 2264-2266.
    • (2001) Science , vol.292 , pp. 2264-2266
    • O'Brien, S.J.1    Eizirik, E.2    Murphy, W.J.3
  • 38
    • 0035675040 scopus 로고    scopus 로고
    • Female meiosis drives karyotypic evolution in mammals
    • Pardo-Manuel de Villena, F. and Sapienza, C. 2001. Female meiosis drives karyotypic evolution in mammals. Genetics 159: 1179-1189.
    • (2001) Genetics , vol.159 , pp. 1179-1189
    • Pardo-Manuel de Villena, F.1    Sapienza, C.2
  • 39
    • 0038271921 scopus 로고    scopus 로고
    • Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution
    • Pevzner, P. and Tesler, G. 2003a. Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution. Proc. Natl. Acad. Sci. 100: 7672-7677.
    • (2003) Proc. Natl. Acad. Sci. , vol.100 , pp. 7672-7677
    • Pevzner, P.1    Tesler, G.2
  • 40
    • 0037264074 scopus 로고    scopus 로고
    • Genome rearrangements in mammalian evolution: Lessons from human and mouse genomes
    • Pevzner, P. and Tesler, G. 2003b. Genome rearrangements in mammalian evolution: Lessons from human and mouse genomes. Genome Res. 13: 37-45.
    • (2003) Genome Res. , vol.13 , pp. 37-45
    • Pevzner, P.1    Tesler, G.2
  • 41
    • 1842684068 scopus 로고    scopus 로고
    • Genome sequence of the brown Norway rat yields insights into mammalian evolution
    • Rat Sequencing Project Consortium
    • Rat Sequencing Project Consortium. 2004. Genome sequence of the brown Norway rat yields insights into mammalian evolution. Nature 428: 493-521.
    • (2004) Nature , vol.428 , pp. 493-521
  • 42
    • 0034031413 scopus 로고    scopus 로고
    • Phylogenetic origin of human chromosomes 7, 16, and 19 and their homologs in placental mammals
    • Richard, F., Lombard, M., and Dutrillaux, B. 2000. Phylogenetic origin of human chromosomes 7, 16, and 19 and their homologs in placental mammals. Genome Res. 10: 644-651.
    • (2000) Genome Res. , vol.10 , pp. 644-651
    • Richard, F.1    Lombard, M.2    Dutrillaux, B.3
  • 43
    • 0042178257 scopus 로고    scopus 로고
    • Reconstruction of the ancestral karyotype of eutherian mammals
    • Richard, F., Lombard, M. and Dutrillaux, B. 2003. Reconstruction of the ancestral karyotype of eutherian mammals. Chromosome Res. 11: 605-618.
    • (2003) Chromosome Res. , vol.11 , pp. 605-618
    • Richard, F.1    Lombard, M.2    Dutrillaux, B.3
  • 44
    • 0345447448 scopus 로고    scopus 로고
    • Rearrangements and chromosomal evolution
    • Sankoff, D. 2003. Rearrangements and chromosomal evolution. Curr. Opin. Genet. Dev. 13: 583-587.
    • (2003) Curr. Opin. Genet. Dev. , vol.13 , pp. 583-587
    • Sankoff, D.1
  • 48
    • 0032981524 scopus 로고    scopus 로고
    • Reciprocal chromosome painting shows that genomic rearrangement between rat and mouse proceeds ten times faster than between humans and cats
    • Stanyon, R., Yang, F., Cavagna, P., O'Brien, P.C., Bagga, M., Ferguson-Smith, M.A., and Wienberg, J. 1999. Reciprocal chromosome painting shows that genomic rearrangement between rat and mouse proceeds ten times faster than between humans and cats. Cytogenet. Cell Genet. 84: 150-155.
    • (1999) Cytogenet. Cell Genet. , vol.84 , pp. 150-155
    • Stanyon, R.1    Yang, F.2    Cavagna, P.3    O'Brien, P.C.4    Bagga, M.5    Ferguson-Smith, M.A.6    Wienberg, J.7
  • 49
    • 0038724830 scopus 로고    scopus 로고
    • Reciprocal chromosome painting shows that squirrels, unlike murid rodents, have a highly conserved genome organization
    • Stanyon, R., Stone, G., Garcia, M., and Froenicke, L. 2003. Reciprocal chromosome painting shows that squirrels, unlike murid rodents, have a highly conserved genome organization. Genomics 82: 245-249.
    • (2003) Genomics , vol.82 , pp. 245-249
    • Stanyon, R.1    Stone, G.2    Garcia, M.3    Froenicke, L.4
  • 53
    • 0035895505 scopus 로고    scopus 로고
    • The sequence of the human genome
    • Smith, H.O., Yandell, M., Evans, C.A., et al. 2001. The sequence of the human genome. Science i ] 291: 1304-1351.
    • (2001) Science , vol.291 , pp. 1304-1351
    • Smith, H.O.1    Yandell, M.2    Evans, C.A.3
  • 56
    • 0035167961 scopus 로고    scopus 로고
    • A dual-color FISH gene map of the proximal region of rat Chromosome 4 and comparative analysis in human and mouse
    • Walentinsson, A., Helou, K., and Levan, G. 2001. A dual-color FISH gene map of the proximal region of rat Chromosome 4 and comparative analysis in human and mouse. Mamm. Gen. 12: 900-908.
    • (2001) Mamm. Gen. , vol.12 , pp. 900-908
    • Walentinsson, A.1    Helou, K.2    Levan, G.3
  • 58
    • 0035052346 scopus 로고    scopus 로고
    • Centromere on the Move
    • Wong, L. and Choo, K. 2001. Centromere on the Move. Genome Res. 11: 513-516.
    • (2001) Genome Res. , vol.11 , pp. 513-516
    • Wong, L.1    Choo, K.2
  • 59
    • 0020027910 scopus 로고
    • The origin of man: A chromosomal pictorial legacy
    • Yunis, J.J. and Prakash, O. 1982. The origin of man: A chromosomal pictorial legacy. Science i ] 215: 1525-1530.
    • (1982) Science , vol.215 , pp. 1525-1530
    • Yunis, J.J.1    Prakash, O.2
  • 60
    • 0035162665 scopus 로고    scopus 로고
    • A comprehensive BAC resource
    • Zhao, S. 2001. A comprehensive BAC resource. Nucleic Acids Res. 29: 141-143.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 141-143
    • Zhao, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.