-
1
-
-
84963574945
-
Neoantigens and microenvironment in type 1 diabetes: Lessons from antitumor immunity
-
Kracht, M.J., Zaldumbide, A. & Roep, B.O. Neoantigens and microenvironment in type 1 diabetes: lessons from antitumor immunity. Trends Endocrinol. Metab. 27, 353-362 (2016).
-
(2016)
Trends Endocrinol. Metab.
, vol.27
, pp. 353-362
-
-
Kracht, M.J.1
Zaldumbide, A.2
Roep, B.O.3
-
2
-
-
84899883247
-
Translating DRiPs: MHC class i immunosurveillance of pathogens and tumors
-
Antón, L.C. & Yewdell, J.W. Translating DRiPs: MHC class I immunosurveillance of pathogens and tumors. J. Leukoc. Biol. 95, 551-562 (2014).
-
(2014)
J. Leukoc. Biol.
, vol.95
, pp. 551-562
-
-
Antón, L.C.1
Yewdell, J.W.2
-
3
-
-
84863222103
-
Circulating preproinsulin signal peptide-specific CD8 T cells restricted by the susceptibility molecule HLA-A24 are expanded at onset of type 1 diabetes and kill β-cells
-
Kronenberg, D. et al. Circulating preproinsulin signal peptide-specific CD8 T cells restricted by the susceptibility molecule HLA-A24 are expanded at onset of type 1 diabetes and kill β-cells. Diabetes 61, 1752-1759 (2012).
-
(2012)
Diabetes
, vol.61
, pp. 1752-1759
-
-
Kronenberg, D.1
-
4
-
-
29444433680
-
Autoreactive CD8 T cells associated with beta cell destruction in type 1 diabetes
-
Pinkse, G.G. et al. Autoreactive CD8 T cells associated with beta cell destruction in type 1 diabetes. Proc. Natl. Acad. Sci. USA 102, 18425-18430 (2005).
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 18425-18430
-
-
Pinkse, G.G.1
-
5
-
-
55849116389
-
CTLs are targeted to kill beta cells in patients with type 1 diabetes through recognition of a glucose-regulated preproinsulin epitope
-
Skowera, A. et al. CTLs are targeted to kill beta cells in patients with type 1 diabetes through recognition of a glucose-regulated preproinsulin epitope. J. Clin. Invest. 118, 3390-3402 (2008).
-
(2008)
J. Clin. Invest.
, vol.118
, pp. 3390-3402
-
-
Skowera, A.1
-
6
-
-
23044455740
-
Recognition of a subregion of human proinsulin by class I-restricted T cells in type 1 diabetic patients
-
Toma, A. et al. Recognition of a subregion of human proinsulin by class I-restricted T cells in type 1 diabetic patients. Proc. Natl. Acad. Sci. USA 102, 10581-10586 (2005).
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 10581-10586
-
-
Toma, A.1
-
7
-
-
67649364114
-
The role of inflammation in insulitis and beta-cell loss in type 1 diabetes
-
Eizirik, D.L., Colli, M.L. & Ortis, F. The role of inflammation in insulitis and beta-cell loss in type 1 diabetes. Nat. Rev. Endocrinol. 5, 219-226 (2009).
-
(2009)
Nat. Rev. Endocrinol.
, vol.5
, pp. 219-226
-
-
Eizirik, D.L.1
Colli, M.L.2
Ortis, F.3
-
8
-
-
84859530797
-
ER stress as a trigger for β-cell dysfunction and autoimmunity in type 1 diabetes
-
O'Sullivan-Murphy, B. & Urano, F. ER stress as a trigger for β-cell dysfunction and autoimmunity in type 1 diabetes. Diabetes 61, 780-781 (2012).
-
(2012)
Diabetes
, vol.61
, pp. 780-781
-
-
O'Sullivan-Murphy, B.1
Urano, F.2
-
9
-
-
84859254586
-
The human pancreatic islet transcriptome: Expression of candidate genes for type 1 diabetes and the impact of pro-inflammatory cytokines
-
Eizirik, D.L. et al. The human pancreatic islet transcriptome: expression of candidate genes for type 1 diabetes and the impact of pro-inflammatory cytokines. PLoS Genet. 8, e1002552 (2012).
-
(2012)
PLoS Genet.
, vol.8
, pp. e1002552
-
-
Eizirik, D.L.1
-
10
-
-
84872905927
-
Post-transcriptional control of candidate risk genes for type 1 diabetes by rare genetic variants
-
de Jong, V.M. et al. Post-transcriptional control of candidate risk genes for type 1 diabetes by rare genetic variants. Genes Immun. 14, 58-61 (2013).
-
(2013)
Genes Immun.
, vol.14
, pp. 58-61
-
-
De Jong, V.M.1
-
11
-
-
84880274758
-
Changing faces, unmasking the beta-cell: Post-translational modification of antigens in type 1 diabetes
-
van Lummel, M., Zaldumbide, A. & Roep, B.O. Changing faces, unmasking the beta-cell: post-translational modification of antigens in type 1 diabetes. Curr. Opin. Endocrinol. Diabetes Obes. 20, 299-306 (2013).
-
(2013)
Curr. Opin. Endocrinol. Diabetes Obes.
, vol.20
, pp. 299-306
-
-
Van Lummel, M.1
Zaldumbide, A.2
Roep, B.O.3
-
12
-
-
84891816614
-
Posttranslational modification of HLA-DQ binding islet autoantigens in type 1 diabetes
-
van Lummel, M. et al. Posttranslational modification of HLA-DQ binding islet autoantigens in type 1 diabetes. Diabetes 63, 237-247 (2014).
-
(2014)
Diabetes
, vol.63
, pp. 237-247
-
-
Van Lummel, M.1
-
13
-
-
84978852701
-
Human islets and dendritic cells generate post-translationally modified islet autoantigens
-
McLaughlin, R.J. et al. Human islets and dendritic cells generate post-translationally modified islet autoantigens. Clin. Exp. Immunol. 185, 133-140 (2016).
-
(2016)
Clin. Exp. Immunol.
, vol.185
, pp. 133-140
-
-
McLaughlin, R.J.1
-
14
-
-
84957922058
-
Pathogenic CD4 T cells in type 1 diabetes recognize epitopes formed by peptide fusion
-
Delong, T. et al. Pathogenic CD4 T cells in type 1 diabetes recognize epitopes formed by peptide fusion. Science 351, 711-714 (2016).
-
(2016)
Science
, vol.351
, pp. 711-714
-
-
Delong, T.1
-
15
-
-
33645811495
-
Protein stability promotes evolvability
-
Bloom, J.D., Labthavikul, S.T., Otey, C.R. & Arnold, F.H. Protein stability promotes evolvability. Proc. Natl. Acad. Sci. USA 103, 5869-5874 (2006).
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 5869-5874
-
-
Bloom, J.D.1
Labthavikul, S.T.2
Otey, C.R.3
Arnold, F.H.4
-
16
-
-
67649356943
-
Translationally optimal codons associate with structurally sensitive sites in proteins
-
Zhou, T., Weems, M. & Wilke, C.O. Translationally optimal codons associate with structurally sensitive sites in proteins. Mol. Biol. Evol. 26, 1571-1580 (2009).
-
(2009)
Mol. Biol. Evol.
, vol.26
, pp. 1571-1580
-
-
Zhou, T.1
Weems, M.2
Wilke, C.O.3
-
17
-
-
34250898483
-
Viral alteration of cellular translational machinery increases defective ribosomal products
-
Berglund, P., Finzi, D., Bennink, J.R. & Yewdell, J.W. Viral alteration of cellular translational machinery increases defective ribosomal products. J. Virol. 81, 7220-7229 (2007).
-
(2007)
J. Virol.
, vol.81
, pp. 7220-7229
-
-
Berglund, P.1
Finzi, D.2
Bennink, J.R.3
Yewdell, J.W.4
-
18
-
-
33644872508
-
Characterization of rapidly degraded polypeptides in mammalian cells reveals a novel layer of nascent protein quality control
-
Qian, S.B., Princiotta, M.F., Bennink, J.R. & Yewdell, J.W. Characterization of rapidly degraded polypeptides in mammalian cells reveals a novel layer of nascent protein quality control. J. Biol. Chem. 281, 392-400 (2006).
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 392-400
-
-
Qian, S.B.1
Princiotta, M.F.2
Bennink, J.R.3
Yewdell, J.W.4
-
19
-
-
84875577518
-
Amsterdamming dRiPs
-
Yewdell, J.W. Amsterdamming DRiPs. Mol. Immunol. 55, 110-112 (2013).
-
(2013)
Mol. Immunol.
, vol.55
, pp. 110-112
-
-
Yewdell, J.W.1
-
20
-
-
54949134074
-
A distinct translation initiation mechanism generates cryptic peptides for immune surveillance
-
Starck, S.R. et al. A distinct translation initiation mechanism generates cryptic peptides for immune surveillance. PLoS One 3, e3460 (2008).
-
(2008)
PLoS One
, vol.3
, pp. e3460
-
-
Starck, S.R.1
-
21
-
-
79958769095
-
Non-conventional sources of peptides presented by MHC class i
-
Starck, S.R. & Shastri, N. Non-conventional sources of peptides presented by MHC class I. Cell. Mol. Life Sci. 68, 1471-1479 (2011).
-
(2011)
Cell. Mol. Life Sci.
, vol.68
, pp. 1471-1479
-
-
Starck, S.R.1
Shastri, N.2
-
22
-
-
0036310679
-
Triggering and augmentation mechanisms, granule pools, and biphasic insulin secretion
-
Bratanova-Tochkova, T.K. et al. Triggering and augmentation mechanisms, granule pools, and biphasic insulin secretion. Diabetes 51 (Suppl. 1), S83-S90 (2002).
-
(2002)
Diabetes
, vol.51
, pp. S83-S90
-
-
Bratanova-Tochkova, T.K.1
-
23
-
-
0042879951
-
Insulin granule dynamics in pancreatic beta cells
-
Rorsman, P. & Renström, E. Insulin granule dynamics in pancreatic beta cells. Diabetologia 46, 1029-1045 (2003).
-
(2003)
Diabetologia
, vol.46
, pp. 1029-1045
-
-
Rorsman, P.1
Renström, E.2
-
24
-
-
18744385526
-
Expanded T cells from pancreatic lymph nodes of type 1 diabetic subjects recognize an insulin epitope
-
Kent, S.C. et al. Expanded T cells from pancreatic lymph nodes of type 1 diabetic subjects recognize an insulin epitope. Nature 435, 224-228 (2005).
-
(2005)
Nature
, vol.435
, pp. 224-228
-
-
Kent, S.C.1
-
25
-
-
18744366947
-
Prime role for an insulin epitope in the development of type 1 diabetes in NOD mice
-
Nakayama, M. et al. Prime role for an insulin epitope in the development of type 1 diabetes in NOD mice. Nature 435, 220-223 (2005).
-
(2005)
Nature
, vol.435
, pp. 220-223
-
-
Nakayama, M.1
-
26
-
-
39149094629
-
Insulin as an autoantigen in NOD/human diabetes
-
Zhang, L., Nakayama, M. & Eisenbarth, G.S. Insulin as an autoantigen in NOD/human diabetes. Curr. Opin. Immunol. 20, 111-118 (2008).
-
(2008)
Curr. Opin. Immunol.
, vol.20
, pp. 111-118
-
-
Zhang, L.1
Nakayama, M.2
Eisenbarth, G.S.3
-
27
-
-
84865631586
-
CD8 T cell autoreactivity to preproinsulin epitopes with very low human leucocyte antigen class i binding affinity
-
Abreu, J.R. et al. CD8 T cell autoreactivity to preproinsulin epitopes with very low human leucocyte antigen class I binding affinity. Clin. Exp. Immunol. 170, 57-65 (2012).
-
(2012)
Clin. Exp. Immunol.
, vol.170
, pp. 57-65
-
-
Abreu, J.R.1
-
28
-
-
34247627376
-
Coxsackie B4 virus infection of beta cells and natural killer cell insulitis in recent-onset type 1 diabetic patients
-
Dotta, F. et al. Coxsackie B4 virus infection of beta cells and natural killer cell insulitis in recent-onset type 1 diabetic patients. Proc. Natl. Acad. Sci. USA 104, 5115-5120 (2007).
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 5115-5120
-
-
Dotta, F.1
-
29
-
-
84870909023
-
Pancreas organ weight in individuals with disease-associated autoantibodies at risk for type 1 diabetes
-
Campbell-Thompson, M., Wasserfall, C., Montgomery, E.L., Atkinson, M.A. & Kaddis, J.S. Pancreas organ weight in individuals with disease-associated autoantibodies at risk for type 1 diabetes. J. Am. Med. Assoc. 308, 2337-2339 (2012).
-
(2012)
J. Am. Med. Assoc.
, vol.308
, pp. 2337-2339
-
-
Campbell-Thompson, M.1
Wasserfall, C.2
Montgomery, E.L.3
Atkinson, M.A.4
Kaddis, J.S.5
-
30
-
-
84856825977
-
Demonstration of islet-autoreactive CD8 T cells in insulitic lesions from recent onset and long-term type 1 diabetes patients
-
Coppieters, K.T. et al. Demonstration of islet-autoreactive CD8 T cells in insulitic lesions from recent onset and long-term type 1 diabetes patients. J. Exp. Med. 209, 51-60 (2012).
-
(2012)
J. Exp. Med.
, vol.209
, pp. 51-60
-
-
Coppieters, K.T.1
-
31
-
-
0037121050
-
Pushing the limits of the scanning mechanism for initiation of translation
-
Kozak, M. Pushing the limits of the scanning mechanism for initiation of translation. Gene 299, 1-34 (2002).
-
(2002)
Gene
, vol.299
, pp. 1-34
-
-
Kozak, M.1
-
32
-
-
79251525523
-
Measuring ER stress and the unfolded protein response using mammalian tissue culture system
-
Oslowski, C.M. & Urano, F. Measuring ER stress and the unfolded protein response using mammalian tissue culture system. Methods Enzymol. 490, 71-92 (2011).
-
(2011)
Methods Enzymol.
, vol.490
, pp. 71-92
-
-
Oslowski, C.M.1
Urano, F.2
-
33
-
-
75649120798
-
Analysis of 19 genes for association with type i diabetes in the Type i Diabetes Genetics Consortium families
-
Howson, J.M., Walker, N.M., Smyth, D.J. & Todd, J.A. Analysis of 19 genes for association with type I diabetes in the Type I Diabetes Genetics Consortium families. Genes Immun. 10 (Suppl. 1), S74-S84 (2009).
-
(2009)
Genes Immun.
, vol.10
, pp. S74-S84
-
-
Howson, J.M.1
Walker, N.M.2
Smyth, D.J.3
Todd, J.A.4
-
34
-
-
84930408328
-
Fine mapping of type 1 diabetes susceptibility loci and evidence for colocalization of causal variants with lymphoid gene enhancers
-
Onengut-Gumuscu, S. et al. Fine mapping of type 1 diabetes susceptibility loci and evidence for colocalization of causal variants with lymphoid gene enhancers. Nat. Genet. 47, 381-386 (2015).
-
(2015)
Nat. Genet.
, vol.47
, pp. 381-386
-
-
Onengut-Gumuscu, S.1
-
35
-
-
0027957088
-
A gene in the HLA class i region contributes to susceptibility to IDDM in the Finnish population. Childhood Diabetes in Finland (DiMe) Study Group
-
Fennessy, M. et al. A gene in the HLA class I region contributes to susceptibility to IDDM in the Finnish population. Childhood Diabetes in Finland (DiMe) Study Group. Diabetologia 37, 937-944 (1994).
-
(1994)
Diabetologia
, vol.37
, pp. 937-944
-
-
Fennessy, M.1
-
36
-
-
0036197220
-
Millennium award recipient contribution. Identification of children with early onset and high incidence of anti-islet autoantibodies
-
Robles, D.T. et al. Millennium award recipient contribution. Identification of children with early onset and high incidence of anti-islet autoantibodies. Clin. Immunol. 102, 217-224 (2002).
-
(2002)
Clin. Immunol.
, vol.102
, pp. 217-224
-
-
Robles, D.T.1
-
37
-
-
77951983004
-
Simultaneous detection of circulating autoreactive CD8+ T cells specific for different islet cell-associated epitopes using combinatorial MHC multimers
-
Velthuis, J.H. et al. Simultaneous detection of circulating autoreactive CD8+ T cells specific for different islet cell-associated epitopes using combinatorial MHC multimers. Diabetes 59, 1721-1730 (2010).
-
(2010)
Diabetes
, vol.59
, pp. 1721-1730
-
-
Velthuis, J.H.1
-
38
-
-
84881316825
-
Genetically engineered human islets protected from CD8-mediated autoimmune destruction in vivo
-
Zaldumbide, A. et al. Genetically engineered human islets protected from CD8-mediated autoimmune destruction in vivo. Mol. Ther. 21, 1592-1601 (2013).
-
(2013)
Mol. Ther.
, vol.21
, pp. 1592-1601
-
-
Zaldumbide, A.1
-
39
-
-
3843117589
-
Reinitiation involving upstream ORFs regulates ATF4 mRNA translation in mammalian cells
-
Vattem, K.M. & Wek, R.C. Reinitiation involving upstream ORFs regulates ATF4 mRNA translation in mammalian cells. Proc. Natl. Acad. Sci. USA 101, 11269-11274 (2004).
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 11269-11274
-
-
Vattem, K.M.1
Wek, R.C.2
-
40
-
-
41449112857
-
Stress-induced translation of ATF5 mRNA is regulated by the 5'-untranslated region
-
Watatani, Y. et al. Stress-induced translation of ATF5 mRNA is regulated by the 5'-untranslated region. J. Biol. Chem. 283, 2543-2553 (2008).
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 2543-2553
-
-
Watatani, Y.1
-
41
-
-
43549105167
-
The unfolded protein response: A pathway that links insulin demand with beta-cell failure and diabetes
-
Scheuner, D. & Kaufman, R.J. The unfolded protein response: a pathway that links insulin demand with beta-cell failure and diabetes. Endocr. Rev. 29, 317-333 (2008).
-
(2008)
Endocr. Rev.
, vol.29
, pp. 317-333
-
-
Scheuner, D.1
Kaufman, R.J.2
-
42
-
-
33947159090
-
Translation of the poly(A) tail plays crucial roles in nonstop mRNA surveillance via translation repression and protein destabilization by proteasome in yeast
-
Ito-Harashima, S., Kuroha, K., Tatematsu, T. & Inada, T. Translation of the poly(A) tail plays crucial roles in nonstop mRNA surveillance via translation repression and protein destabilization by proteasome in yeast. Genes Dev. 21, 519-524 (2007).
-
(2007)
Genes Dev.
, vol.21
, pp. 519-524
-
-
Ito-Harashima, S.1
Kuroha, K.2
Tatematsu, T.3
Inada, T.4
-
43
-
-
77957169824
-
Role of a ribosome-associated E3 ubiquitin ligase in protein quality control
-
Bengtson, M.H. & Joazeiro, C.A. Role of a ribosome-associated E3 ubiquitin ligase in protein quality control. Nature 467, 470-473 (2010).
-
(2010)
Nature
, vol.467
, pp. 470-473
-
-
Bengtson, M.H.1
Joazeiro, C.A.2
-
44
-
-
0030627982
-
Neural network prediction of translation initiation sites in eukaryotes: Perspectives for EST and genome analysis
-
Pedersen, A.G. & Nielsen, H. Neural network prediction of translation initiation sites in eukaryotes: perspectives for EST and genome analysis. Proc. Int. Conf. Intell. Syst. Mol. Biol. 5, 226-233 (1997).
-
(1997)
Proc. Int. Conf. Intell. Syst. Mol. Biol.
, vol.5
, pp. 226-233
-
-
Pedersen, A.G.1
Nielsen, H.2
-
45
-
-
10744222046
-
Sensitive quantitative predictions of peptide-MHC binding by a 'Query by Committee' artificial neural network approach
-
Buus, S. et al. Sensitive quantitative predictions of peptide-MHC binding by a 'Query by Committee' artificial neural network approach. Tissue Antigens 62, 378-384 (2003).
-
(2003)
Tissue Antigens
, vol.62
, pp. 378-384
-
-
Buus, S.1
-
46
-
-
0034141690
-
Purification of his-tagged proteins by immobilized chelate affinity chromatography: The benefits from the use of organic solvent
-
Franken, K.L. et al. Purification of his-tagged proteins by immobilized chelate affinity chromatography: the benefits from the use of organic solvent. Protein Expr. Purif. 18, 95-99 (2000).
-
(2000)
Protein Expr. Purif.
, vol.18
, pp. 95-99
-
-
Franken, K.L.1
-
47
-
-
84858595805
-
Type 1 diabetes-associated HLA-DQ8 transdimer accommodates a unique peptide repertoire
-
van Lummel, M. et al. Type 1 diabetes-associated HLA-DQ8 transdimer accommodates a unique peptide repertoire. J. Biol. Chem. 287, 9514-9524 (2012).
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 9514-9524
-
-
Van Lummel, M.1
-
48
-
-
48149094447
-
Large-scale characterization of natural ligands explains the unique gluten-binding properties of HLA-DQ2
-
Stepniak, D. et al. Large-scale characterization of natural ligands explains the unique gluten-binding properties of HLA-DQ2. J. Immunol. 180, 3268-3278 (2008).
-
(2008)
J. Immunol.
, vol.180
, pp. 3268-3278
-
-
Stepniak, D.1
-
49
-
-
70449368149
-
Induction of Treg by monocyte-derived DC modulated by vitamin D3 or dexamethasone: Differential role for PD-L1
-
Unger, W.W., Laban, S., Kleijwegt, F.S., van der Slik, A.R. & Roep, B.O. Induction of Treg by monocyte-derived DC modulated by vitamin D3 or dexamethasone: differential role for PD-L1. Eur. J. Immunol. 39, 3147-3159 (2009).
-
(2009)
Eur. J. Immunol.
, vol.39
, pp. 3147-3159
-
-
Unger, W.W.1
Laban, S.2
Kleijwegt, F.S.3
Van Der Slik, A.R.4
Roep, B.O.5
-
50
-
-
84962406592
-
Discovery of a selective islet peptidome presented by the highest-risk HLA-DQ8trans Molecule
-
van Lummel, M. et al. Discovery of a selective islet peptidome presented by the highest-risk HLA-DQ8trans Molecule. Diabetes 65, 732-741 (2016).
-
(2016)
Diabetes
, vol.65
, pp. 732-741
-
-
Van Lummel, M.1
-
51
-
-
84974832027
-
Dendritic cells guide islet autoimmunity through a restricted and uniquely processed peptidome presented by high-risk HLA-DR
-
van Lummel, M. et al. Dendritic cells guide islet autoimmunity through a restricted and uniquely processed peptidome presented by high-risk HLA-DR. J. Immunol. 196, 3253-3263 (2016).
-
(2016)
J. Immunol.
, vol.196
, pp. 3253-3263
-
-
Van Lummel, M.1
-
52
-
-
0031746774
-
Cloned T cells from a recent onset IDDM patient reactive with insulin B-chain
-
Schloot, N.C., Willemen, S., Duinkerken, G., de Vries, R.R. & Roep, B.O. Cloned T cells from a recent onset IDDM patient reactive with insulin B-chain. J. Autoimmun. 11, 169-175 (1998).
-
(1998)
J. Autoimmun.
, vol.11
, pp. 169-175
-
-
Schloot, N.C.1
Willemen, S.2
Duinkerken, G.3
De Vries, R.R.4
Roep, B.O.5
-
53
-
-
1342311444
-
Lentiviral vectors efficiently transduce quiescent mature 3T3-L1 adipocytes
-
Carlotti, F. et al. Lentiviral vectors efficiently transduce quiescent mature 3T3-L1 adipocytes. Mol. Ther. 9, 209-217 (2004).
-
(2004)
Mol. Ther.
, vol.9
, pp. 209-217
-
-
Carlotti, F.1
|