-
1
-
-
0042658190
-
Nuclear mRNA export: Insights from virology
-
Cullen, B.R. Nuclear mRNA export: Insights from virology. Trends Biochem. Sci. 2003, 28, 419-424.
-
(2003)
Trends Biochem. Sci
, vol.28
, pp. 419-424
-
-
Cullen, B.R.1
-
2
-
-
79960631283
-
Nuclear export dynamics of RNA-protein complexes
-
Grunwald, D.; Singer, R.H.; Rout, M. Nuclear export dynamics of RNA-protein complexes. Nature 2011, 475, 333-341.
-
(2011)
Nature
, vol.475
, pp. 333-341
-
-
Grunwald, D.1
Singer, R.H.2
Rout, M.3
-
3
-
-
0035827686
-
Overexpression of tap/p15 heterodimers bypasses nuclear retention and stimulates nuclear mRNA export
-
Braun, I.C.; Herold, A.; Rode, M.; Conti, E.; Izaurralde, E. Overexpression of tap/p15 heterodimers bypasses nuclear retention and stimulates nuclear mRNA export. J. Biol. Chem. 2001, 276, 20536-20543.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 20536-20543
-
-
Braun, I.C.1
Herold, A.2
Rode, M.3
Conti, E.4
Izaurralde, E.5
-
4
-
-
84890645100
-
Stable assembly of HIV-1 export complexes occurs cotranscriptionally
-
Nawroth, I.; Mueller, F.; Basyuk, E.; Beerens, N.; Rahbek, U.L.; Darzacq, X.; Bertrand, E.; Kjems, J.; Schmidt, U. Stable assembly of HIV-1 export complexes occurs cotranscriptionally. RNA 2014, 20, 1-8.
-
(2014)
RNA
, vol.20
, pp. 1-8
-
-
Nawroth, I.1
Mueller, F.2
Basyuk, E.3
Beerens, N.4
Rahbek, U.L.5
Darzacq, X.6
Bertrand, E.7
Kjems, J.8
Schmidt, U.9
-
5
-
-
42449143475
-
Unexpected roles for UPF1 in HIV-1 RNA metabolism and translation
-
Ajamian, L.; Abrahamyan, L.; Milev, M.; Ivanov, P.V.; Kulozik, A.E.; Gehring, N.H.; Mouland, A.J. Unexpected roles for UPF1 in HIV-1 RNA metabolism and translation. RNA 2008, 14, 914-927.
-
(2008)
RNA
, vol.14
, pp. 914-927
-
-
Ajamian, L.1
Abrahamyan, L.2
Milev, M.3
Ivanov, P.V.4
Kulozik, A.E.5
Gehring, N.H.6
Mouland, A.J.7
-
6
-
-
84863760251
-
The human T-lymphotropic virus type 1 tax protein inhibits nonsense-mediated mRNA decay by interacting with INT6/EIF3E and UPF1
-
Mocquet, V.; Neusiedler, J.; Rende, F.; Cluet, D.; Robin, J.P.; Terme, J.M.; Duc Dodon, M.; Wittmann, J.; Morris, C.; le Hir, H.; et al. The human T-lymphotropic virus type 1 tax protein inhibits nonsense-mediated mRNA decay by interacting with INT6/EIF3E and UPF1. J. Virol. 2012, 86, 7530-7543.
-
(2012)
J. Virol
, vol.86
, pp. 7530-7543
-
-
Mocquet, V.1
Neusiedler, J.2
Rende, F.3
Cluet, D.4
Robin, J.P.5
Terme, J.M.6
Duc Dodon, M.7
Wittmann, J.8
Morris, C.9
le Hir, H.10
-
7
-
-
84879167304
-
Viral interference with host mRNA surveillance, the nonsense-mediated mRNA decay (NMD) pathway, through a new function of HTLV-1 Rex: Implications for retroviral replication
-
Nakano, K.; Ando, T.; Yamagishi, M.; Yokoyama, K.; Ishida, T.; Ohsugi, T.; Tanaka, Y.; Brighty, D.W.; Watanabe, T. Viral interference with host mRNA surveillance, the nonsense-mediated mRNA decay (NMD) pathway, through a new function of HTLV-1 Rex: Implications for retroviral replication. Microbes Infect. 2013, 15, 491-505.
-
(2013)
Microbes Infect
, vol.15
, pp. 491-505
-
-
Nakano, K.1
Ando, T.2
Yamagishi, M.3
Yokoyama, K.4
Ishida, T.5
Ohsugi, T.6
Tanaka, Y.7
Brighty, D.W.8
Watanabe, T.9
-
8
-
-
0027494083
-
Alternative splicing of human immunodeficiency virus type 1 mRNA modulates viral protein expression, replication, and infectivity
-
Purcell, D.F.; Martin, M.A. Alternative splicing of human immunodeficiency virus type 1 mRNA modulates viral protein expression, replication, and infectivity. J. Virol. 1993, 67, 6365-6378.
-
(1993)
J. Virol
, vol.67
, pp. 6365-6378
-
-
Purcell, D.F.1
Martin, M.A.2
-
9
-
-
0024518918
-
The HIV-1 Rev trans-activator acts through a structured target sequence to activate nuclear export of unspliced viral mRNA
-
Malim, M.H.; Hauber, J.; Le, S.Y.; Maizel, J.V.; Cullen, B.R. The HIV-1 Rev trans-activator acts through a structured target sequence to activate nuclear export of unspliced viral mRNA. Nature 1989, 338, 254-257.
-
(1989)
Nature
, vol.338
, pp. 254-257
-
-
Malim, M.H.1
Hauber, J.2
Le, S.Y.3
Maizel, J.V.4
Cullen, B.R.5
-
10
-
-
0035809913
-
Cofactor requirements for nuclear export of Rev response element (RRE)-and constitutive transport element (CTE)-containing retroviral RNAs: An unexpected role for actin
-
Hofmann, W.; Reichart, B.; Ewald, A.; Muller, E.; Schmitt, I.; Stauber, R.H.; Lottspeich, F.; Jockusch, B.M.; Scheer, U.; Hauber, J.; et al. Cofactor requirements for nuclear export of Rev response element (RRE)-and constitutive transport element (CTE)-containing retroviral RNAs: An unexpected role for actin. J. Cell Biol 2001, 152, 895-910.
-
(2001)
J. Cell Biol
, vol.152
, pp. 895-910
-
-
Hofmann, W.1
Reichart, B.2
Ewald, A.3
Muller, E.4
Schmitt, I.5
Stauber, R.H.6
Lottspeich, F.7
Jockusch, B.M.8
Scheer, U.9
Hauber, J.10
-
11
-
-
0034565018
-
Rev protein and its cellular partners
-
Kjems, J.; Askjaer, P. Rev protein and its cellular partners. Adv. Pharmacol. 2000, 48, 251-298.
-
(2000)
Adv. Pharmacol
, vol.48
, pp. 251-298
-
-
Kjems, J.1
Askjaer, P.2
-
12
-
-
7044253474
-
Requirement of DDX3 dead box RNA helicase for HIV-1 Rev-RRE export function
-
Yedavalli, V.S.; Neuveut, C.; Chi, Y.H.; Kleiman, L.; Jeang, K.T. Requirement of DDX3 dead box RNA helicase for HIV-1 Rev-RRE export function. Cell 2004, 119, 381-392.
-
(2004)
Cell
, vol.119
, pp. 381-392
-
-
Yedavalli, V.S.1
Neuveut, C.2
Chi, Y.H.3
Kleiman, L.4
Jeang, K.T.5
-
13
-
-
13944267564
-
Sam68 is absolutely required for Rev function and HIV-1 production
-
Modem, S.; Badri, K.R.; Holland, T.C.; Reddy, T.R. Sam68 is absolutely required for Rev function and HIV-1 production. Nucleic Acids Res. 2005, 33, 873-879.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 873-879
-
-
Modem, S.1
Badri, K.R.2
Holland, T.C.3
Reddy, T.R.4
-
14
-
-
0034721040
-
Sam68, RNA helicase a and tap cooperate in the post-transcriptional regulation of human immunodeficiency virus and type D retroviral mRNA
-
Reddy, T.R.; Tang, H.; Xu, W.; Wong-Staal, F. Sam68, RNA helicase a and tap cooperate in the post-transcriptional regulation of human immunodeficiency virus and type D retroviral mRNA. Oncogene 2000, 19, 3570-3575.
-
(2000)
Oncogene
, vol.19
, pp. 3570-3575
-
-
Reddy, T.R.1
Tang, H.2
Xu, W.3
Wong-Staal, F.4
-
15
-
-
79958238205
-
HIV-1 remodels the nuclear pore complex
-
Monette, A.; Pante, N.; Mouland, A.J. HIV-1 remodels the nuclear pore complex. J. Cell Biol. 2011, 193, 619-631.
-
(2011)
J. Cell Biol
, vol.193
, pp. 619-631
-
-
Monette, A.1
Pante, N.2
Mouland, A.J.3
-
16
-
-
36849085461
-
An anti-apoptotic protein, HAX-1, inhibits the HIV-1 Rev function by altering its sub-cellular localization
-
Modem, S.; Reddy, T.R. An anti-apoptotic protein, HAX-1, inhibits the HIV-1 Rev function by altering its sub-cellular localization. J. Cell Physiol. 2008, 214, 14-19.
-
(2008)
J. Cell Physiol
, vol.214
, pp. 14-19
-
-
Modem, S.1
Reddy, T.R.2
-
17
-
-
70349840709
-
Insulin-like growth factor II mRNA binding protein 1 modulates Rev-dependent human immunodeficiency virus type 1 RNA expression
-
Zhou, Y.; Rong, L.; Zhang, J.; Aloysius, C.; Pan, Q.; Liang, C. Insulin-like growth factor II mRNA binding protein 1 modulates Rev-dependent human immunodeficiency virus type 1 RNA expression. Virology 2009, 393, 210-220.
-
(2009)
Virology
, vol.393
, pp. 210-220
-
-
Zhou, Y.1
Rong, L.2
Zhang, J.3
Aloysius, C.4
Pan, Q.5
Liang, C.6
-
18
-
-
84857367885
-
Discovery of the first small molecule inhibitor of human DDX3 specifically designed to target the RNA binding site: Towards the next generation HIV-1 inhibitors
-
Radi, M.; Falchi, F.; Garbelli, A.; Samuele, A.; Bernardo, V.; Paolucci, S.; Baldanti, F.; Schenone, S.; Manetti, F.; Maga, G.; et al. Discovery of the first small molecule inhibitor of human DDX3 specifically designed to target the RNA binding site: Towards the next generation HIV-1 inhibitors. Bioorg. Med. Chem. Lett. 2012, 22, 2094-2098.
-
(2012)
Bioorg. Med. Chem. Lett
, vol.22
, pp. 2094-2098
-
-
Radi, M.1
Falchi, F.2
Garbelli, A.3
Samuele, A.4
Bernardo, V.5
Paolucci, S.6
Baldanti, F.7
Schenone, S.8
Manetti, F.9
Maga, G.10
-
19
-
-
77949904260
-
Nonsense-mediated mRNA decay in human cells: Mechanistic insights, functions beyond quality control and the double-life of nmd factors
-
Nicholson, P.; Yepiskoposyan, H.; Metze, S.; Orozco, R.Z.; Kleinschmidt, N.; Muhlemann, O. Nonsense-mediated mRNA decay in human cells: Mechanistic insights, functions beyond quality control and the double-life of nmd factors. Cell Mol. Life Sci. 2010, 67, 677-700.
-
(2010)
Cell Mol. Life Sci
, vol.67
, pp. 677-700
-
-
Nicholson, P.1
Yepiskoposyan, H.2
Metze, S.3
Orozco, R.Z.4
Kleinschmidt, N.5
Muhlemann, O.6
-
20
-
-
59649124310
-
Nonsense-mediated mRNA decay (NMD) mechanisms
-
Brogna, S.; Wen, J. Nonsense-mediated mRNA decay (NMD) mechanisms. Nat. Struct. Mol. Biol. 2009, 16, 107-113.
-
(2009)
Nat. Struct. Mol. Biol
, vol.16
, pp. 107-113
-
-
Brogna, S.1
Wen, J.2
-
21
-
-
0037064145
-
Separable roles for RENT1/HUPF1 in altered splicing and decay of nonsense transcripts
-
Mendell, J.T.; ap Rhys, C.M.; Dietz, H.C. Separable roles for RENT1/HUPF1 in altered splicing and decay of nonsense transcripts. Science 2002, 298, 419-422.
-
(2002)
Science
, vol.298
, pp. 419-422
-
-
Mendell, J.T.1
ap Rhys, C.M.2
Dietz, H.C.3
-
22
-
-
49949105213
-
The multiple lives of nmd factors: Balancing roles in gene and genome regulation
-
Isken, O.; Maquat, L.E. The multiple lives of nmd factors: Balancing roles in gene and genome regulation. Nat. Rev. Genet. 2008, 9, 699-712.
-
(2008)
Nat. Rev. Genet
, vol.9
, pp. 699-712
-
-
Isken, O.1
Maquat, L.E.2
-
23
-
-
33745712580
-
Nuclear mRNA degradation pathway(s) are implicated in xist regulation and X chromosome inactivation
-
Ciaudo, C.; Bourdet, A.; Cohen-Tannoudji, M.; Dietz, H.C.; Rougeulle, C.; Avner, P. Nuclear mRNA degradation pathway(s) are implicated in xist regulation and X chromosome inactivation. PLoS Genet. 2006, 2, e94.
-
(2006)
PLoS Genet
, vol.2
-
-
Ciaudo, C.1
Bourdet, A.2
Cohen-Tannoudji, M.3
Dietz, H.C.4
Rougeulle, C.5
Avner, P.6
-
24
-
-
12944327374
-
Mammalian staufen1 recruits UPF1 to specific mRNA 3'-UTRs so as to elicit mRNA decay
-
Kim, Y.K.; Furic, L.; Desgroseillers, L.; Maquat, L.E. Mammalian staufen1 recruits UPF1 to specific mRNA 3'-UTRs so as to elicit mRNA decay. Cell 2005, 120, 195-208.
-
(2005)
Cell
, vol.120
, pp. 195-208
-
-
Kim, Y.K.1
Furic, L.2
Desgroseillers, L.3
Maquat, L.E.4
-
25
-
-
32944458421
-
The human RNA surveillance factor UPF1 is required for s phase progression and genome stability
-
Azzalin, C.M.; Lingner, J. The human RNA surveillance factor UPF1 is required for s phase progression and genome stability. Curr. Biol. 2006, 16, 433-439.
-
(2006)
Curr. Biol
, vol.16
, pp. 433-439
-
-
Azzalin, C.M.1
Lingner, J.2
-
26
-
-
80053615725
-
Human UPF1 interacts with TPP1 and telomerase and sustains telomere leading-strand replication
-
Chawla, R.; Redon, S.; Raftopoulou, C.; Wischnewski, H.; Gagos, S.; Azzalin, C.M. Human UPF1 interacts with TPP1 and telomerase and sustains telomere leading-strand replication. EMBO J. 2011, 30, 4047-4058.
-
(2011)
EMBO J
, vol.30
, pp. 4047-4058
-
-
Chawla, R.1
Redon, S.2
Raftopoulou, C.3
Wischnewski, H.4
Gagos, S.5
Azzalin, C.M.6
-
27
-
-
42449161413
-
The editing enzyme ADAR1 and the mRNA surveillance protein HUPF1 interact in the cell nucleus
-
Agranat, L.; Raitskin, O.; Sperling, J.; Sperling, R. The editing enzyme ADAR1 and the mRNA surveillance protein HUPF1 interact in the cell nucleus. Proc. Natl. Acad. Sci. USA 2008, 105, 5028-5033.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 5028-5033
-
-
Agranat, L.1
Raitskin, O.2
Sperling, J.3
Sperling, R.4
-
28
-
-
37849005006
-
NMD factors UPF2 and UPF3 bridge UPF1 to the exon junction complex and stimulate its RNA helicase activity
-
Chamieh, H.; Ballut, L.; Bonneau, F.; le Hir, H. NMD factors UPF2 and UPF3 bridge UPF1 to the exon junction complex and stimulate its RNA helicase activity. Nat. Struct. Mol. Biol. 2008, 15, 85-93.
-
(2008)
Nat. Struct. Mol. Biol
, vol.15
, pp. 85-93
-
-
Chamieh, H.1
Ballut, L.2
Bonneau, F.3
le Hir, H.4
-
29
-
-
40949148553
-
Interactions between UPF1, ERFS, PABP and the exon junction complex suggest an integrated model for mammalian NMD pathways
-
Ivanov, P.V.; Gehring, N.H.; Kunz, J.B.; Hentze, M.W.; Kulozik, A.E. Interactions between UPF1, ERFS, PABP and the exon junction complex suggest an integrated model for mammalian NMD pathways. EMBO J. 2008, 27, 736-747.
-
(2008)
EMBO J
, vol.27
, pp. 736-747
-
-
Ivanov, P.V.1
Gehring, N.H.2
Kunz, J.B.3
Hentze, M.W.4
Kulozik, A.E.5
-
30
-
-
32044435368
-
Binding of a novel smg-1-UPF1-ERF1-ERF3 complex (SURF) to the exon junction complex triggers UPF1 phosphorylation and nonsense-mediated mRNA decay
-
Kashima, I.; Yamashita, A.; Izumi, N.; Kataoka, N.; Morishita, R.; Hoshino, S.; Ohno, M.; Dreyfuss, G.; Ohno, S. Binding of a novel smg-1-UPF1-ERF1-ERF3 complex (SURF) to the exon junction complex triggers UPF1 phosphorylation and nonsense-mediated mRNA decay. Genes Dev. 2006, 20, 355-367.
-
(2006)
Genes Dev
, vol.20
, pp. 355-367
-
-
Kashima, I.1
Yamashita, A.2
Izumi, N.3
Kataoka, N.4
Morishita, R.5
Hoshino, S.6
Ohno, M.7
Dreyfuss, G.8
Ohno, S.9
-
31
-
-
10744232514
-
Phosphorylation of HUPF1 induces formation of mRNA surveillance complexes containing HSMG-5 and HSMG-7
-
Ohnishi, T.; Yamashita, A.; Kashima, I.; Schell, T.; Anders, K.R.; Grimson, A.; Hachiya, T.; Hentze, M.W.; Anderson, P.; Ohno, S. Phosphorylation of HUPF1 induces formation of mRNA surveillance complexes containing HSMG-5 and HSMG-7. Mol. Cell 2003, 12, 1187-1200.
-
(2003)
Mol. Cell
, vol.12
, pp. 1187-1200
-
-
Ohnishi, T.1
Yamashita, A.2
Kashima, I.3
Schell, T.4
Anders, K.R.5
Grimson, A.6
Hachiya, T.7
Hentze, M.W.8
Anderson, P.9
Ohno, S.10
-
32
-
-
0033835231
-
Characterization of the biochemical properties of the human UPF1 gene product that is involved in nonsense-mediated mRNA decay
-
Bhattacharya, A.; Czaplinski, K.; Trifillis, P.; He, F.; Jacobson, A.; Peltz, S.W. Characterization of the biochemical properties of the human UPF1 gene product that is involved in nonsense-mediated mRNA decay. RNA 2000, 6, 1226-1235.
-
(2000)
RNA
, vol.6
, pp. 1226-1235
-
-
Bhattacharya, A.1
Czaplinski, K.2
Trifillis, P.3
He, F.4
Jacobson, A.5
Peltz, S.W.6
-
33
-
-
66049162655
-
Execution of nonsense-mediated mRNA decay: What defines a substrate?
-
Rebbapragada, I.; Lykke-Andersen, J. Execution of nonsense-mediated mRNA decay: What defines a substrate? Curr. Opin. Cell Biol. 2009, 21, 394-402.
-
(2009)
Curr. Opin. Cell Biol
, vol.21
, pp. 394-402
-
-
Rebbapragada, I.1
Lykke-Andersen, J.2
-
34
-
-
79955964537
-
Identification of a microRNA that activates gene expression by repressing nonsense-mediated RNA decay
-
Bruno, I.G.; Karam, R.; Huang, L.; Bhardwaj, A.; Lou, C.H.; Shum, E.Y.; Song, H.W.; Corbett, M.A.; Gifford, W.D.; Gecz, J.; et al. Identification of a microRNA that activates gene expression by repressing nonsense-mediated RNA decay. Mol. Cell 2011, 42, 500-510.
-
(2011)
Mol. Cell
, vol.42
, pp. 500-510
-
-
Bruno, I.G.1
Karam, R.2
Huang, L.3
Bhardwaj, A.4
Lou, C.H.5
Shum, E.Y.6
Song, H.W.7
Corbett, M.A.8
Gifford, W.D.9
Gecz, J.10
-
35
-
-
81755172088
-
Autoregulation of the nonsense-mediated mRNA decay pathway in human cells
-
Yepiskoposyan, H.; Aeschimann, F.; Nilsson, D.; Okoniewski, M.; Muhlemann, O. Autoregulation of the nonsense-mediated mRNA decay pathway in human cells. RNA 2011, 17, 2108-2118.
-
(2011)
RNA
, vol.17
, pp. 2108-2118
-
-
Yepiskoposyan, H.1
Aeschimann, F.2
Nilsson, D.3
Okoniewski, M.4
Muhlemann, O.5
-
36
-
-
80052979901
-
RNA homeostasis governed by cell type-specific and branched feedback loops acting on NMD
-
Huang, L.; Lou, C.H.; Chan, W.; Shum, E.Y.; Shao, A.; Stone, E.; Karam, R.; Song, H.W.; Wilkinson, M.F. RNA homeostasis governed by cell type-specific and branched feedback loops acting on NMD. Mol. Cell 2011, 43, 950-961.
-
(2011)
Mol. Cell
, vol.43
, pp. 950-961
-
-
Huang, L.1
Lou, C.H.2
Chan, W.3
Shum, E.Y.4
Shao, A.5
Stone, E.6
Karam, R.7
Song, H.W.8
Wilkinson, M.F.9
-
37
-
-
77953370114
-
Insights into the recruitment of the NMD machinery from the crystal structure of a core EJC-UPF3B complex
-
Buchwald, G.; Ebert, J.; Basquin, C.; Sauliere, J.; Jayachandran, U.; Bono, F.; le Hir, H.; Conti, E. Insights into the recruitment of the NMD machinery from the crystal structure of a core EJC-UPF3B complex. Proc. Natl. Acad. Sci. USA 2010, 107, 10050-10055.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 10050-10055
-
-
Buchwald, G.1
Ebert, J.2
Basquin, C.3
Sauliere, J.4
Jayachandran, U.5
Bono, F.6
le Hir, H.7
Conti, E.8
-
38
-
-
0038814325
-
Y14 and HUPF3B form an NMD-activating complex
-
Gehring, N.H.; Neu-Yilik, G.; Schell, T.; Hentze, M.W.; Kulozik, A.E. Y14 and HUPF3B form an NMD-activating complex. Mol. Cell 2003, 11, 939-949.
-
(2003)
Mol. Cell
, vol.11
, pp. 939-949
-
-
Gehring, N.H.1
Neu-Yilik, G.2
Schell, T.3
Hentze, M.W.4
Kulozik, A.E.5
-
39
-
-
84881477715
-
Translation-dependent displacement of UPF1 from coding sequences causes its enrichment in 3'-UTRs
-
Zund, D.; Gruber, A.R.; Zavolan, M.; Muhlemann, O. Translation-dependent displacement of UPF1 from coding sequences causes its enrichment in 3'-UTRs. Nat. Struct. Mol. Biol. 2013, 20, 936-943.
-
(2013)
Nat. Struct. Mol. Biol
, vol.20
, pp. 936-943
-
-
Zund, D.1
Gruber, A.R.2
Zavolan, M.3
Muhlemann, O.4
-
40
-
-
84885069820
-
Global analyses of UPF1 binding and function reveal expanded scope of nonsense-mediated mRNA decay
-
Hurt, J.A.; Robertson, A.D.; Burge, C.B. Global analyses of UPF1 binding and function reveal expanded scope of nonsense-mediated mRNA decay. Genome Res. 2013, 23, 1636-1650.
-
(2013)
Genome Res
, vol.23
, pp. 1636-1650
-
-
Hurt, J.A.1
Robertson, A.D.2
Burge, C.B.3
-
41
-
-
25844512736
-
Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements
-
Gehring, N.H.; Kunz, J.B.; Neu-Yilik, G.; Breit, S.; Viegas, M.H.; Hentze, M.W.; Kulozik, A.E. Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements. Mol. Cell 2005, 20, 65-75.
-
(2005)
Mol. Cell
, vol.20
, pp. 65-75
-
-
Gehring, N.H.1
Kunz, J.B.2
Neu-Yilik, G.3
Breit, S.4
Viegas, M.H.5
Hentze, M.W.6
Kulozik, A.E.7
-
42
-
-
66249097064
-
Long 3'-UTRs target wild-type mRNAs for nonsense-mediated mRNA decay in saccharomyces cerevisiae
-
Kebaara, B.W.; Atkin, A.L. Long 3'-UTRs target wild-type mRNAs for nonsense-mediated mRNA decay in saccharomyces cerevisiae. Nucleic Acids Res. 2009, 37, 2771-2778.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 2771-2778
-
-
Kebaara, B.W.1
Atkin, A.L.2
-
43
-
-
80055011827
-
The structure and function of the rous sarcoma virus RNA stability element
-
Withers, J.B.; Beemon, K.L. The structure and function of the rous sarcoma virus RNA stability element. J. Cell. Biochem. 2011, 112, 3085-3092.
-
(2011)
J. Cell. Biochem
, vol.112
, pp. 3085-3092
-
-
Withers, J.B.1
Beemon, K.L.2
-
44
-
-
79960558747
-
Characterization of the HIV-1 RNA associated proteome identifies matrin 3 as a nuclear cofactor of Rev function
-
Kula, A.; Guerra, J.; Knezevich, A.; Kleva, D.; Myers, M.P.; Marcello, A. Characterization of the HIV-1 RNA associated proteome identifies matrin 3 as a nuclear cofactor of Rev function. Retrovirology 2011, doi:10.1186/1742-4690-8-60.
-
(2011)
Retrovirology
-
-
Kula, A.1
Guerra, J.2
Knezevich, A.3
Kleva, D.4
Myers, M.P.5
Marcello, A.6
-
45
-
-
84875793133
-
Characterization of staufen1 ribonucleoproteins by mass spectrometry and biochemical analyses reveal the presence of diverse host proteins associated with human immunodeficiency virus type 1
-
Milev, M.P.; Ravichandran, M.; Khan, M.F.; Schriemer, D.C.; Mouland, A.J. Characterization of staufen1 ribonucleoproteins by mass spectrometry and biochemical analyses reveal the presence of diverse host proteins associated with human immunodeficiency virus type 1. Front. Microbiol. 2012, doi:10.3389/fmicb.2012.00367.
-
(2012)
Front. Microbiol
-
-
Milev, M.P.1
Ravichandran, M.2
Khan, M.F.3
Schriemer, D.C.4
Mouland, A.J.5
-
46
-
-
77958459763
-
UPF1 senses 3'-UTR length to potentiate mRNA decay
-
Hogg, J.R.; Goff, S.P. UPF1 senses 3'-UTR length to potentiate mRNA decay. Cell 2010, 143, 379-389.
-
(2010)
Cell
, vol.143
, pp. 379-389
-
-
Hogg, J.R.1
Goff, S.P.2
-
47
-
-
33646865949
-
Functions of HUPF3A and HUPF3B in nonsense-mediated mRNA decay and translation
-
Kunz, J.B.; Neu-Yilik, G.; Hentze, M.W.; Kulozik, A.E.; Gehring, N.H. Functions of HUPF3A and HUPF3B in nonsense-mediated mRNA decay and translation. RNA 2006, 12, 1015-1022.
-
(2006)
RNA
, vol.12
, pp. 1015-1022
-
-
Kunz, J.B.1
Neu-Yilik, G.2
Hentze, M.W.3
Kulozik, A.E.4
Gehring, N.H.5
-
48
-
-
0034751160
-
Identification and characterization of human orthologues to saccharomyces cerevisiae UPF2 protein and UPF3 protein (caenorhabditis elegans SMG-4)
-
Serin, G.; Gersappe, A.; Black, J.D.; Aronoff, R.; Maquat, L.E. Identification and characterization of human orthologues to saccharomyces cerevisiae UPF2 protein and UPF3 protein (caenorhabditis elegans SMG-4). Mol. Cell Biol. 2001, 21, 209-223.
-
(2001)
Mol. Cell Biol
, vol.21
, pp. 209-223
-
-
Serin, G.1
Gersappe, A.2
Black, J.D.3
Aronoff, R.4
Maquat, L.E.5
-
49
-
-
67650330563
-
A UPF3-mediated regulatory switch that maintains RNA surveillance
-
Chan, W.K.; Bhalla, A.D.; le Hir, H.; Nguyen, L.S.; Huang, L.; Gecz, J.; Wilkinson, M.F. A UPF3-mediated regulatory switch that maintains RNA surveillance. Nat. Struct. Mol. Biol. 2009, 16, 747-753.
-
(2009)
Nat. Struct. Mol. Biol
, vol.16
, pp. 747-753
-
-
Chan, W.K.1
Bhalla, A.D.2
le Hir, H.3
Nguyen, L.S.4
Huang, L.5
Gecz, J.6
Wilkinson, M.F.7
-
50
-
-
84856858152
-
N- and C-terminal UPF1 phosphorylations create binding platforms for SMG-6 and SMG-5:SMG-7 during NMD
-
Okada-Katsuhata, Y.; Yamashita, A.; Kutsuzawa, K.; Izumi, N.; Hirahara, F.; Ohno, S. N- and C-terminal UPF1 phosphorylations create binding platforms for SMG-6 and SMG-5:SMG-7 during NMD. Nucleic Acids Res. 2012, 40, 1251-1266.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 1251-1266
-
-
Okada-Katsuhata, Y.1
Yamashita, A.2
Kutsuzawa, K.3
Izumi, N.4
Hirahara, F.5
Ohno, S.6
-
51
-
-
0033527576
-
The human tap nuclear RNA export factor contains a novel transportin-dependent nuclear localization signal that lacks nuclear export signal function
-
Truant, R.; Kang, Y.; Cullen, B.R. The human tap nuclear RNA export factor contains a novel transportin-dependent nuclear localization signal that lacks nuclear export signal function. J. Biol. Chem. 1999, 274, 32167-32171.
-
(1999)
J. Biol. Chem
, vol.274
, pp. 32167-32171
-
-
Truant, R.1
Kang, Y.2
Cullen, B.R.3
-
52
-
-
34047201192
-
Live-cell assay for simultaneous monitoring of expression and interaction of proteins
-
Wolff, H.; Hartl, A.; Eilken, H.M.; Hadian, K.; Ziegler, M.; Brack-Werner, R. Live-cell assay for simultaneous monitoring of expression and interaction of proteins. Biotechniques 2006, 41, 690-692.
-
(2006)
Biotechniques
, vol.41
, pp. 690-692
-
-
Wolff, H.1
Hartl, A.2
Eilken, H.M.3
Hadian, K.4
Ziegler, M.5
Brack-Werner, R.6
-
53
-
-
68249138707
-
Unusual bipartite mode of interaction between the nonsense-mediated decay factors, UPF1 and UPF2
-
Clerici, M.; Mourao, A.; Gutsche, I.; Gehring, N.H.; Hentze, M.W.; Kulozik, A.; Kadlec, J.; Sattler, M.; Cusack, S. Unusual bipartite mode of interaction between the nonsense-mediated decay factors, UPF1 and UPF2. EMBO J. 2009, 28, 2293-2306.
-
(2009)
EMBO J
, vol.28
, pp. 2293-2306
-
-
Clerici, M.1
Mourao, A.2
Gutsche, I.3
Gehring, N.H.4
Hentze, M.W.5
Kulozik, A.6
Kadlec, J.7
Sattler, M.8
Cusack, S.9
-
54
-
-
69949118279
-
Inhibition of nonsense-mediated mRNA decay by the natural product pateamine a through eukaryotic initiation factor 4AIII
-
Dang, Y.; Low, W.K.; Xu, J.; Gehring, N.H.; Dietz, H.C.; Romo, D.; Liu, J.O. Inhibition of nonsense-mediated mRNA decay by the natural product pateamine a through eukaryotic initiation factor 4AIII. J. Biol. Chem. 2009, 284, 23613-23621.
-
(2009)
J. Biol. Chem
, vol.284
, pp. 23613-23621
-
-
Dang, Y.1
Low, W.K.2
Xu, J.3
Gehring, N.H.4
Dietz, H.C.5
Romo, D.6
Liu, J.O.7
-
55
-
-
0034460323
-
Novel UPF2P orthologues suggest a functional link between translation initiation and nonsense surveillance complexes
-
Mendell, J.T.; Medghalchi, S.M.; Lake, R.G.; Noensie, E.N.; Dietz, H.C. Novel UPF2P orthologues suggest a functional link between translation initiation and nonsense surveillance complexes. Mol. Cell Biol. 2000, 20, 8944-8957.
-
(2000)
Mol. Cell Biol
, vol.20
, pp. 8944-8957
-
-
Mendell, J.T.1
Medghalchi, S.M.2
Lake, R.G.3
Noensie, E.N.4
Dietz, H.C.5
-
56
-
-
71449106849
-
Human immunodeficiency virus type 1 (HIV-1) induces the cytoplasmic retention of heterogeneous nuclear ribonucleoprotein A1 by disrupting nuclear import: Implications for HIV-1 gene expression
-
Monette, A.; Ajamian, L.; Lopez-Lastra, M.; Mouland, A.J. Human immunodeficiency virus type 1 (HIV-1) induces the cytoplasmic retention of heterogeneous nuclear ribonucleoprotein A1 by disrupting nuclear import: Implications for HIV-1 gene expression. J. Biol. Chem. 2009, 284, 31350-31362.
-
(2009)
J. Biol. Chem
, vol.284
, pp. 31350-31362
-
-
Monette, A.1
Ajamian, L.2
Lopez-Lastra, M.3
Mouland, A.J.4
-
57
-
-
34249937436
-
The host protein staufen1 participates in human immunodeficiency virus type 1 assembly in live cells by influencing pr55Gag multimerization
-
Chatel-Chaix, L.; Abrahamyan, L.; Frechina, C.; Mouland, A.J.; des Groseillers, L. The host protein staufen1 participates in human immunodeficiency virus type 1 assembly in live cells by influencing pr55Gag multimerization. J. Virol. 2007, 81, 6216-6230.
-
(2007)
J. Virol
, vol.81
, pp. 6216-6230
-
-
Chatel-Chaix, L.1
Abrahamyan, L.2
Frechina, C.3
Mouland, A.J.4
des Groseillers, L.5
-
58
-
-
67649598052
-
Intracellular transport of human immunodeficiency virus type 1 genomic RNA and viral production are dependent on dynein motor function and late endosome positioning
-
Lehmann, M.; Milev, M.P.; Abrahamyan, L.; Yao, X.J.; Pante, N.; Mouland, A.J. Intracellular transport of human immunodeficiency virus type 1 genomic RNA and viral production are dependent on dynein motor function and late endosome positioning. J. Biol. Chem. 2009, 284, 14572-14585.
-
(2009)
J. Biol. Chem
, vol.284
, pp. 14572-14585
-
-
Lehmann, M.1
Milev, M.P.2
Abrahamyan, L.3
Yao, X.J.4
Pante, N.5
Mouland, A.J.6
-
59
-
-
6344294315
-
A late role for the association of hnRNP A2 with the HIV-1 hnRNP A2 response elements in genomic RNA, Gag, and Vpr localization
-
Beriault, V.; Clement, J.F.; Levesque, K.; Lebel, C.; Yong, X.; Chabot, B.; Cohen, E.A.; Cochrane, A.W.; Rigby, W.F.; Mouland, A.J. A late role for the association of hnRNP A2 with the HIV-1 hnRNP A2 response elements in genomic RNA, Gag, and Vpr localization. J. Biol. Chem. 2004, 279, 44141-44153.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 44141-44153
-
-
Beriault, V.1
Clement, J.F.2
Levesque, K.3
Lebel, C.4
Yong, X.5
Chabot, B.6
Cohen, E.A.7
Cochrane, A.W.8
Rigby, W.F.9
Mouland, A.J.10
-
60
-
-
84863763633
-
Detection of viral RNA by fluorescence in situ hybridization (fish)
-
Vyboh, K.; Ajamian, L.; Mouland, A.J. Detection of viral RNA by fluorescence in situ hybridization (fish). J. Vis. Exp. 2012, doi:10.3791/4002.
-
(2012)
J. Vis. Exp
-
-
Vyboh, K.1
Ajamian, L.2
Mouland, A.J.3
-
61
-
-
76649143385
-
Novel staufen1 ribonucleoproteins prevent formation of stress granules but favour encapsidation of HIV-1 genomic RNA
-
Abrahamyan, L.G.; Chatel-Chaix, L.; Ajamian, L.; Milev, M.P.; Monette, A.; Clement, J.F.; Song, R.; Lehmann, M.; Desgroseillers, L.; Laughrea, M.; et al. Novel staufen1 ribonucleoproteins prevent formation of stress granules but favour encapsidation of HIV-1 genomic RNA. J. Cell Sci. 2010, 123, 369-383.
-
(2010)
J. Cell Sci
, vol.123
, pp. 369-383
-
-
Abrahamyan, L.G.1
Chatel-Chaix, L.2
Ajamian, L.3
Milev, M.P.4
Monette, A.5
Clement, J.F.6
Song, R.7
Lehmann, M.8
Desgroseillers, L.9
Laughrea, M.10
-
62
-
-
33747063288
-
Trafficking of HIV-1 RNA is mediated by heterogeneous nuclear ribonucleoprotein A2 expression and impacts on viral assembly
-
Levesque, K.; Halvorsen, M.; Abrahamyan, L.; Chatel-Chaix, L.; Poupon, V.; Gordon, H.; DesGroseillers, L.; Gatignol, A.; Mouland, A.J. Trafficking of HIV-1 RNA is mediated by heterogeneous nuclear ribonucleoprotein A2 expression and impacts on viral assembly. Traffic 2006, 7, 1177-1193.
-
(2006)
Traffic
, vol.7
, pp. 1177-1193
-
-
Levesque, K.1
Halvorsen, M.2
Abrahamyan, L.3
Chatel-Chaix, L.4
Poupon, V.5
Gordon, H.6
DesGroseillers, L.7
Gatignol, A.8
Mouland, A.J.9
-
63
-
-
47049130164
-
Imaging the biogenesis of individual HIV-1 virions in live cells
-
Jouvenet, N.; Bieniasz, P.D.; Simon, S.M. Imaging the biogenesis of individual HIV-1 virions in live cells. Nature 2008, 454, 236-240.
-
(2008)
Nature
, vol.454
, pp. 236-240
-
-
Jouvenet, N.1
Bieniasz, P.D.2
Simon, S.M.3
-
64
-
-
0026672676
-
Macrophage-tropic human immunodeficiency virus isolates from different patients exhibit unusual V3 envelope sequence homogeneity in comparison with T-cell-tropic isolates: Definition of critical amino acids involved in cell tropism
-
Chesebro, B.; Wehrly, K.; Nishio, J.; Perryman, S. Macrophage-tropic human immunodeficiency virus isolates from different patients exhibit unusual V3 envelope sequence homogeneity in comparison with T-cell-tropic isolates: Definition of critical amino acids involved in cell tropism. J. Virol. 1992, 66, 6547-6554.
-
(1992)
J. Virol
, vol.66
, pp. 6547-6554
-
-
Chesebro, B.1
Wehrly, K.2
Nishio, J.3
Perryman, S.4
-
65
-
-
0141457246
-
Control of HIV-1 ENV RNA splicing and transport: Investigating the role of hnRNP A1 in exon splicing silencer (ESS3A) function
-
Asai, K.; Platt, C.; Cochrane, A. Control of HIV-1 ENV RNA splicing and transport: Investigating the role of hnRNP A1 in exon splicing silencer (ESS3A) function. Virology 2003, 314, 229-242.
-
(2003)
Virology
, vol.314
, pp. 229-242
-
-
Asai, K.1
Platt, C.2
Cochrane, A.3
-
66
-
-
0034035072
-
The double-stranded RNA-binding protein staufen is incorporated in human immunodeficiency virus type 1: Evidence for a role in genomic RNA encapsidation
-
Mouland, A.J.; Mercier, J.; Luo, M.; Bernier, L.; DesGroseillers, L.; Cohen, E.A. The double-stranded RNA-binding protein staufen is incorporated in human immunodeficiency virus type 1: Evidence for a role in genomic RNA encapsidation. J. Virol. 2000, 74, 5441-5451.
-
(2000)
J. Virol
, vol.74
, pp. 5441-5451
-
-
Mouland, A.J.1
Mercier, J.2
Luo, M.3
Bernier, L.4
DesGroseillers, L.5
Cohen, E.A.6
-
67
-
-
34547751991
-
Crystal structure of conserved domains 1 and 2 of the human Dead-box helicase DDX3X in complex with the mononucleotide AMP
-
Hogbom, M.; Collins, R.; van den Berg, S.; Jenvert, R.M.; Karlberg, T.; Kotenyova, T.; Flores, A.; Karlsson Hedestam, G.B.; Schiavone, L.H. Crystal structure of conserved domains 1 and 2 of the human Dead-box helicase DDX3X in complex with the mononucleotide AMP. J. Mol. Biol. 2007, 372, 150-159.
-
(2007)
J. Mol. Biol
, vol.372
, pp. 150-159
-
-
Hogbom, M.1
Collins, R.2
van den Berg, S.3
Jenvert, R.M.4
Karlberg, T.5
Kotenyova, T.6
Flores, A.7
Karlsson Hedestam, G.B.8
Schiavone, L.H.9
-
68
-
-
77950539375
-
Implications of the HIV-1 Rev dimer structure at 3.2 a resolution for multimeric binding to the Rev response element
-
Di Mattia, M.A.; Watts, N.R.; Stahl, S.J.; Rader, C.; Wingfield, P.T.; Stuart, D.I.; Steven, A.C.; Grimes, J.M. Implications of the HIV-1 Rev dimer structure at 3.2 a resolution for multimeric binding to the Rev response element. Proc. Natl. Acad. Sci. USA 2010, 107, 5810-5814.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 5810-5814
-
-
Di Mattia, M.A.1
Watts, N.R.2
Stahl, S.J.3
Rader, C.4
Wingfield, P.T.5
Stuart, D.I.6
Steven, A.C.7
Grimes, J.M.8
-
69
-
-
77955446835
-
HIV Rev response element (RRE) directs assembly of the Rev homooligomer into discrete asymmetric complexes
-
Daugherty, M.D.; Booth, D.S.; Jayaraman, B.; Cheng, Y.; Frankel, A.D. HIV Rev response element (RRE) directs assembly of the Rev homooligomer into discrete asymmetric complexes. Proc. Natl. Acad. Sci. USA 2010, 107, 12481-12486.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 12481-12486
-
-
Daugherty, M.D.1
Booth, D.S.2
Jayaraman, B.3
Cheng, Y.4
Frankel, A.D.5
-
70
-
-
77249126602
-
Alignment of multiple protein structures based on sequence and structure features
-
Madhusudhan, M.S.; Webb, B.M.; Marti-Renom, M.A.; Eswar, N.; Sali, A. Alignment of multiple protein structures based on sequence and structure features. Protein Eng. Des. Sel. 2009, 22, 569-574.
-
(2009)
Protein Eng. Des. Sel
, vol.22
, pp. 569-574
-
-
Madhusudhan, M.S.1
Webb, B.M.2
Marti-Renom, M.A.3
Eswar, N.4
Sali, A.5
-
71
-
-
84878087999
-
Serverification of molecular modeling applications: The rosetta online server that includes everyone (rosie)
-
Lyskov, S.; Chou, F.C.; Conchuir, S.O.; Der, B.S.; Drew, K.; Kuroda, D.; Xu, J.; Weitzner, B.D.; Renfrew, P.D.; Sripakdeevong, P.; et al. Serverification of molecular modeling applications: The rosetta online server that includes everyone (rosie). PLoS ONE 2013, 8, e63906.
-
(2013)
PLoS ONE
, vol.8
-
-
Lyskov, S.1
Chou, F.C.2
Conchuir, S.O.3
Der, B.S.4
Drew, K.5
Kuroda, D.6
Xu, J.7
Weitzner, B.D.8
Renfrew, P.D.9
Sripakdeevong, P.10
-
72
-
-
1842577654
-
Computational redesign of protein-protein interaction specificity
-
Kortemme, T.; Joachimiak, L.A.; Bullock, A.N.; Schuler, A.D.; Stoddard, B.L.; Baker, D. Computational redesign of protein-protein interaction specificity. Nat. Struct. Mol. Biol. 2004, 11, 371-379.
-
(2004)
Nat. Struct. Mol. Biol
, vol.11
, pp. 371-379
-
-
Kortemme, T.1
Joachimiak, L.A.2
Bullock, A.N.3
Schuler, A.D.4
Stoddard, B.L.5
Baker, D.6
-
73
-
-
85012085620
-
-
McGill University, Montreal, Canada. Unpublished data
-
Ajamian, L.; Mouland, A.J. McGill University, Montreal, Canada. Unpublished data, 2015.
-
(2015)
-
-
Ajamian, L.1
Mouland, A.J.2
-
74
-
-
58149520665
-
SMD and NMD are competitive pathways that contribute to myogenesis: Effects on PAX3 and myogenin mRNAs
-
Gong, C.; Kim, Y.K.; Woeller, C.F.; Tang, Y.; Maquat, L.E. SMD and NMD are competitive pathways that contribute to myogenesis: Effects on PAX3 and myogenin mRNAs. Genes Dev. 2009, 23, 54-66.
-
(2009)
Genes Dev
, vol.23
, pp. 54-66
-
-
Gong, C.1
Kim, Y.K.2
Woeller, C.F.3
Tang, Y.4
Maquat, L.E.5
-
75
-
-
13644266893
-
UPF1p, a highly conserved protein required for nonsense-mediated mRNA decay, interacts with the nuclear pore proteins NUP100P and NUP116P
-
Nazarenus, T.; Cedarberg, R.; Bell, R.; Cheatle, J.; Forch, A.; Haifley, A.; Hou, A.; Kebaara, B.W.; Shields, C.; Stoysich, K.; et al. UPF1p, a highly conserved protein required for nonsense-mediated mRNA decay, interacts with the nuclear pore proteins NUP100P and NUP116P. Gene 2005, 345, 199-212.
-
(2005)
Gene
, vol.345
, pp. 199-212
-
-
Nazarenus, T.1
Cedarberg, R.2
Bell, R.3
Cheatle, J.4
Forch, A.5
Haifley, A.6
Hou, A.7
Kebaara, B.W.8
Shields, C.9
Stoysich, K.10
-
76
-
-
84864799957
-
Virus-producing cells determine the host protein profiles of HIV-1 virion cores
-
Santos, S.; Obukhov, Y.; Nekhai, S.; Bukrinsky, M.; Iordanskiy, S. Virus-producing cells determine the host protein profiles of HIV-1 virion cores. Retrovirology 2012, doi:10.1186/1742-4690-9-65.
-
(2012)
Retrovirology
-
-
Santos, S.1
Obukhov, Y.2
Nekhai, S.3
Bukrinsky, M.4
Iordanskiy, S.5
-
77
-
-
0030745114
-
Cloning and characterization of HUPF1, a human homolog of the saccharomyces cerevisiae nonsense mRNA-reducing UPF1 protein
-
Applequist, S.E.; Selg, M.; Raman, C.; Jack, H.M. Cloning and characterization of HUPF1, a human homolog of the saccharomyces cerevisiae nonsense mRNA-reducing UPF1 protein. Nucleic Acids Res. 1997, 25, 814-821.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 814-821
-
-
Applequist, S.E.1
Selg, M.2
Raman, C.3
Jack, H.M.4
-
78
-
-
18144403878
-
Within you, without you: HIV-1 Rev and RNA export
-
Dayton, A.I. Within you, without you: HIV-1 Rev and RNA export. Retrovirology 2004, doi:10.1186/ 1742-4690-1-35.
-
(2004)
Retrovirology
-
-
Dayton, A.I.1
-
79
-
-
59649120307
-
Cellular proteins and HIV-1 Rev function
-
Suhasini, M.; Reddy, T.R. Cellular proteins and HIV-1 Rev function. Curr. HIV Res. 2009, 7, 91-100.
-
(2009)
Curr. HIV Res
, vol.7
, pp. 91-100
-
-
Suhasini, M.1
Reddy, T.R.2
-
80
-
-
77951969691
-
Live cell visualization of the interactions between HIV-1 Gag and the cellular RNA-binding protein Staufen1
-
Milev, M.P.; Brown, C.M.; Mouland, A.J. Live cell visualization of the interactions between HIV-1 Gag and the cellular RNA-binding protein Staufen1. Retrovirology 2010, doi:10.1186/1742-4690-7-41.
-
(2010)
Retrovirology
-
-
Milev, M.P.1
Brown, C.M.2
Mouland, A.J.3
-
81
-
-
0030924190
-
CRM1 is an export receptor for leucine-rich nuclear export signals
-
Fornerod, M.; Ohno, M.; Yoshida, M.; Mattaj, I.W. CRM1 is an export receptor for leucine-rich nuclear export signals. Cell 1997, 90, 1051-1060.
-
(1997)
Cell
, vol.90
, pp. 1051-1060
-
-
Fornerod, M.1
Ohno, M.2
Yoshida, M.3
Mattaj, I.W.4
-
82
-
-
84897980054
-
Zdock server: Interactive docking prediction of protein-protein complexes and symmetric multimers
-
Pierce, B.G.; Wiehe, K.; Hwang, H.; Kim, B.H.; Vreven, T.; Weng, Z. Zdock server: Interactive docking prediction of protein-protein complexes and symmetric multimers. Bioinformatics 2014, 30, 1771-1773.
-
(2014)
Bioinformatics
, vol.30
, pp. 1771-1773
-
-
Pierce, B.G.1
Wiehe, K.2
Hwang, H.3
Kim, B.H.4
Vreven, T.5
Weng, Z.6
-
83
-
-
33749239197
-
Crystal structure of the UPF2-interacting domain of nonsense-mediated mRNA decay factor UPF1
-
Kadlec, J.; Guilligay, D.; Ravelli, R.B.; Cusack, S. Crystal structure of the UPF2-interacting domain of nonsense-mediated mRNA decay factor UPF1. RNA 2006, 12, 1817-1824.
-
(2006)
RNA
, vol.12
, pp. 1817-1824
-
-
Kadlec, J.1
Guilligay, D.2
Ravelli, R.B.3
Cusack, S.4
-
84
-
-
81755161588
-
Cotranscriptional effect of a premature termination codon revealed by live-cell imaging
-
De Turris, V.; Nicholson, P.; Orozco, R.Z.; Singer, R.H.; Muhlemann, O. Cotranscriptional effect of a premature termination codon revealed by live-cell imaging. RNA 2011, 17, 2094-2107.
-
(2011)
RNA
, vol.17
, pp. 2094-2107
-
-
De Turris, V.1
Nicholson, P.2
Orozco, R.Z.3
Singer, R.H.4
Muhlemann, O.5
-
85
-
-
84855998457
-
Global landscape of HIV-human protein complexes
-
Jager, S.; Cimermancic, P.; Gulbahce, N.; Johnson, J.R.; McGovern, K.E.; Clarke, S.C.; Shales, M.; Mercenne, G.; Pache, L.; Li, K.; et al. Global landscape of HIV-human protein complexes. Nature 2012, 481, 365-370.
-
(2012)
Nature
, vol.481
, pp. 365-370
-
-
Jager, S.1
Cimermancic, P.2
Gulbahce, N.3
Johnson, J.R.4
McGovern, K.E.5
Clarke, S.C.6
Shales, M.7
Mercenne, G.8
Pache, L.9
Li, K.10
-
86
-
-
84881222279
-
UPF1 is crucial for the infectivity of human immunodeficiency virus type 1 progeny virions
-
Serquina, A.K.; Das, S.R.; Popova, E.; Ojelabi, O.A.; Roy, C.K.; Gottlinger, H.G. UPF1 is crucial for the infectivity of human immunodeficiency virus type 1 progeny virions. J. Virol. 2013, 87, 8853-8861.
-
(2013)
J. Virol
, vol.87
, pp. 8853-8861
-
-
Serquina, A.K.1
Das, S.R.2
Popova, E.3
Ojelabi, O.A.4
Roy, C.K.5
Gottlinger, H.G.6
-
87
-
-
85003260887
-
The export receptor CRM1 forms a dimer to promote nuclear export of HIV RNA
-
Booth, D.S.; Cheng, Y.; Frankel, A.D. The export receptor CRM1 forms a dimer to promote nuclear export of HIV RNA. eLife 2014, doi:10.7554/eLife.04121.
-
(2014)
eLife
-
-
Booth, D.S.1
Cheng, Y.2
Frankel, A.D.3
-
88
-
-
38349187678
-
Nucleocytoplasmic transport of proteins
-
Sorokin, A.V.; Kim, E.R.; Ovchinnikov, L.P. Nucleocytoplasmic transport of proteins. Biochemistry 2007, 72, 1439-1457.
-
(2007)
Biochemistry
, vol.72
, pp. 1439-1457
-
-
Sorokin, A.V.1
Kim, E.R.2
Ovchinnikov, L.P.3
-
89
-
-
0032888954
-
Nucleoporins NUP98 and NUP214 participate in nuclear export of human immunodeficiency virus type 1 Rev
-
Zolotukhin, A.S.; Felber, B.K. Nucleoporins NUP98 and NUP214 participate in nuclear export of human immunodeficiency virus type 1 Rev. J. Virol. 1999, 73, 120-127.
-
(1999)
J. Virol
, vol.73
, pp. 120-127
-
-
Zolotukhin, A.S.1
Felber, B.K.2
-
90
-
-
33144460384
-
Ataxia-telangiectasia-mutated (ATM) protein can enhance human immunodeficiency virus type 1 replication by stimulating Rev function
-
Ariumi, Y.; Trono, D. Ataxia-telangiectasia-mutated (ATM) protein can enhance human immunodeficiency virus type 1 replication by stimulating Rev function. J. Virol. 2006, 80, 2445-2452.
-
(2006)
J. Virol
, vol.80
, pp. 2445-2452
-
-
Ariumi, Y.1
Trono, D.2
-
91
-
-
2942572923
-
The mRNA surveillance protein hSMG-1 functions in genotoxic stress response pathways in mammalian cells
-
Brumbaugh, K.M.; Otterness, D.M.; Geisen, C.; Oliveira, V.; Brognard, J.; Li, X.; Lejeune, F.; Tibbetts, R.S.; Maquat, L.E.; Abraham, R.T. The mRNA surveillance protein hSMG-1 functions in genotoxic stress response pathways in mammalian cells. Mol. Cell 2004, 14, 585-598.
-
(2004)
Mol. Cell
, vol.14
, pp. 585-598
-
-
Brumbaugh, K.M.1
Otterness, D.M.2
Geisen, C.3
Oliveira, V.4
Brognard, J.5
Li, X.6
Lejeune, F.7
Tibbetts, R.S.8
Maquat, L.E.9
Abraham, R.T.10
-
92
-
-
0037365789
-
ATM and related protein kinases: Safeguarding genome integrity
-
Shiloh, Y. ATM and related protein kinases: Safeguarding genome integrity. Nat. Rev. Cancer 2003, 3, 155-168.
-
(2003)
Nat. Rev. Cancer
, vol.3
, pp. 155-168
-
-
Shiloh, Y.1
-
93
-
-
69949191661
-
Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the arabidopsis nucleolus
-
Kim, S.H.; Koroleva, O.A.; Lewandowska, D.; Pendle, A.F.; Clark, G.P.; Simpson, C.G.; Shaw, P.J.; Brown, J.W. Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the arabidopsis nucleolus. Plant Cell 2009, 21, 2045-2057.
-
(2009)
Plant Cell
, vol.21
, pp. 2045-2057
-
-
Kim, S.H.1
Koroleva, O.A.2
Lewandowska, D.3
Pendle, A.F.4
Clark, G.P.5
Simpson, C.G.6
Shaw, P.J.7
Brown, J.W.8
-
94
-
-
0036645697
-
The exon junction complex is detected on CBP80-bound but not eIF4E-bound mRNA in mammalian cells: Dynamics of MRNP remodeling
-
Lejeune, F.; Ishigaki, Y.; Li, X.; Maquat, L.E. The exon junction complex is detected on CBP80-bound but not eIF4E-bound mRNA in mammalian cells: Dynamics of MRNP remodeling. EMBO J. 2002, 21, 3536-3545.
-
(2002)
EMBO J
, vol.21
, pp. 3536-3545
-
-
Lejeune, F.1
Ishigaki, Y.2
Li, X.3
Maquat, L.E.4
-
95
-
-
70450182086
-
Gene expression networks: Competing mRNA decay pathways in mammalian cells
-
Maquat, L.E.; Gong, C. Gene expression networks: Competing mRNA decay pathways in mammalian cells. Biochem. Soc. Trans. 2009, 37, 1287-1292.
-
(2009)
Biochem. Soc. Trans
, vol.37
, pp. 1287-1292
-
-
Maquat, L.E.1
Gong, C.2
-
96
-
-
84864933811
-
Evidence that the UPF1-related molecular motor scans the 3'-UTR to ensure mRNA integrity
-
Shigeoka, T.; Kato, S.; Kawaichi, M.; Ishida, Y. Evidence that the UPF1-related molecular motor scans the 3'-UTR to ensure mRNA integrity. Nucleic Acids Res. 2012, 40, 6887-6897.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 6887-6897
-
-
Shigeoka, T.1
Kato, S.2
Kawaichi, M.3
Ishida, Y.4
-
97
-
-
79952686670
-
Molecular mechanisms for the RNA-dependent atpase activity of UPF1 and its regulation by UPF2
-
Chakrabarti, S.; Jayachandran, U.; Bonneau, F.; Fiorini, F.; Basquin, C.; Domcke, S.; le Hir, H.; Conti, E. Molecular mechanisms for the RNA-dependent atpase activity of UPF1 and its regulation by UPF2. Mol. Cell 2011, 41, 693-703.
-
(2011)
Mol. Cell
, vol.41
, pp. 693-703
-
-
Chakrabarti, S.1
Jayachandran, U.2
Bonneau, F.3
Fiorini, F.4
Basquin, C.5
Domcke, S.6
le Hir, H.7
Conti, E.8
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