-
1
-
-
0014932468
-
Total synthesis of the gene for an alanine transfer ribonucleic acid fromyeast
-
Agarwal KL, Buchi H, Caruthers MH, Gupta N, Khorana HG, Kleppe K, Kumar A, Ohtsuka E, Rajbhandary UL, Van de Sande JH, et al. 1970. Total synthesis of the gene for an alanine transfer ribonucleic acid fromyeast. Nature 227: 27–34.
-
(1970)
Nature
, vol.227
, pp. 27-34
-
-
Agarwal, K.L.1
Buchi, H.2
Caruthers, M.H.3
Gupta, N.4
Khorana, H.G.5
Kleppe, K.6
Kumar, A.7
Ohtsuka, E.8
Rajbhandary, U.L.9
Van De Sande, J.H.10
-
2
-
-
84897581176
-
Total synthesis of a functional designer eukaryotic chromosome
-
Annaluru, N, Muller H, Mitchell LA, Ramalingam S, Stracquadanio G, Richardson SM, Dymond JS, Kuang Z, Scheifele LZ, Cooper EM, et al. 2014. Total synthesis of a functional designer eukaryotic chromosome. Science 344: 55–58.
-
(2014)
Science
, vol.344
, pp. 55-58
-
-
Annaluru, N.1
Muller, H.2
Mitchell, L.A.3
Ramalingam, S.4
Stracquadanio, G.5
Richardson, S.M.6
Dymond, J.S.7
Kuang, Z.8
Scheifele, L.Z.9
Cooper, E.M.10
-
3
-
-
0032499868
-
Gene synthesis by an LCR-based approach: High-level production of leptin-l54 using synthetic gene in Escherichia coli
-
Au, LC, Yang FY, Yang WJ, Lo SH, Kao CF. 1998. Gene synthesis by an LCR-based approach: High-level production of leptin-l54 using synthetic gene in Escherichia coli. Biochem Biophys Res Commun 248: 200–203.
-
(1998)
Biochem Biophys Res Commun
, vol.248
, pp. 200-203
-
-
Au, L.C.1
Yang, F.Y.2
Yang, W.J.3
Lo, S.H.4
Kao, C.F.5
-
4
-
-
28644442082
-
Correcting errors in synthetic DNA through consensus shuffling
-
Binkowski, BF, Richmond KE, Kaysen J, Sussman MR, Belshaw PJ. 2005. Correcting errors in synthetic DNA through consensus shuffling. Nucleic Acids Res 33: e55.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Binkowski, B.F.1
Richmond, K.E.2
Kaysen, J.3
Sussman, M.R.4
Belshaw, P.J.5
-
5
-
-
84957058205
-
Antisense transcription as a tool to tune gene expression
-
Brophy, JA, Voigt CA. 2016. Antisense transcription as a tool to tune gene expression. Mol Syst Biol 12: 854.
-
(2016)
Mol Syst Biol
, vol.12
, pp. 854
-
-
Brophy, J.A.1
Voigt, C.A.2
-
6
-
-
84859589886
-
Genetic switchboard for synthetic biology applications
-
Callura, JM, Cantor CR, Collins JJ. 2012. Genetic switchboard for synthetic biology applications. Proc Natl Acad Sci 109: 5850–5855.
-
(2012)
Proc Natl Acad Sci
, vol.109
, pp. 5850-5855
-
-
Callura, J.M.1
Cantor, C.R.2
Collins, J.J.3
-
7
-
-
16544393254
-
Protein-mediated error correction for de novo DNA synthesis
-
Carr, PA, Park JS, Lee YJ, Yu T, Zhang S, Jacobson JM. 2004. Protein-mediated error correction for de novo DNA synthesis. Nucleic Acids Res 32: e162.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Carr, P.A.1
Park, J.S.2
Lee, Y.J.3
Yu, T.4
Zhang, S.5
Jacobson, J.M.6
-
8
-
-
79953169546
-
A brief review of DNA and RNA chemical synthesis
-
Caruthers, MH. 2011. A brief review of DNA and RNA chemical synthesis. Biochem Soc Trans 39: 575–580.
-
(2011)
Biochem Soc Trans
, vol.39
, pp. 575-580
-
-
Caruthers, M.H.1
-
9
-
-
0037106052
-
High throughput parallel synthesis of oligonucleotides with 1536 channel synthesizer
-
Cheng, JY, Chen HH, Kao YS, Kao WC, Peck K. 2002. High throughput parallel synthesis of oligonucleotides with 1536 channel synthesizer. Nucleic Acids Res 30: e93.
-
(2002)
Nucleic Acids Res
, vol.30
-
-
Cheng, J.Y.1
Chen, H.H.2
Kao, Y.S.3
Kao, W.C.4
Peck, K.5
-
10
-
-
20844438492
-
Production of complex nucleic acid libraries using highly parallel in situ oligonucleotide synthesis
-
Cleary, MA, Kilian K, Wang Y, Bradshaw J, Cavet G, Ge W, Kulkarni A, Paddison PJ, Chang K, Sheth N, et al. 2004. Production of complex nucleic acid libraries using highly parallel in situ oligonucleotide synthesis. Nat Methods 1: 241–248.
-
(2004)
Nat Methods
, vol.1
, pp. 241-248
-
-
Cleary, M.A.1
Kilian, K.2
Wang, Y.3
Bradshaw, J.4
Cavet, G.5
Ge, W.6
Kulkarni, A.7
Paddison, P.J.8
Chang, K.9
Sheth, N.10
-
11
-
-
59149092285
-
Gene synthesis demystified
-
Czar, MJ, Anderson JC, Bader JS, Peccoud J. 2009. Gene synthesis demystified. Trends Biotechnol 27: 63–72.
-
(2009)
Trends Biotechnol
, vol.27
, pp. 63-72
-
-
Czar, M.J.1
Erson, J.C.2
Bader, J.S.3
Peccoud, J.4
-
12
-
-
84896836282
-
Rapid and reliable DNA assembly via ligase cycling reaction
-
de Kok S, Stanton LH, Slaby T, Durot M, Holmes VF, Patel KG, Platt D, Shapland EB, Serber Z, Dean J, et al. 2014. Rapid and reliable DNA assembly via ligase cycling reaction. ACS Synth Biol 3: 97–106.
-
(2014)
ACS Synth Biol
, vol.3
, pp. 97-106
-
-
De Kok, S.1
Stanton, L.H.2
Slaby, T.3
Durot, M.4
Holmes, V.F.5
Patel, K.G.6
Platt, D.7
Shapland, E.B.8
Serber, Z.9
Dean, J.10
-
13
-
-
0024995923
-
A rapid method for the construction of synthetic genes using the polymerase chain reaction
-
Dillon, PJ, Rosen CA. 1990. A rapid method for the construction of synthetic genes using the polymerase chain reaction. BioTechniques 9: 298–300.
-
(1990)
Biotechniques
, vol.9
, pp. 298-300
-
-
Dillon, P.J.1
Rosen, C.A.2
-
14
-
-
84878279327
-
Synthetic generation of influenza vaccine viruses for rapid response to pandemics
-
185ra168
-
Dormitzer, PR, Suphaphiphat P, Gibson DG, Wentworth DE, Stockwell TB, Algire MA, Alperovich N, Barro M, Brown DM, Craig S, et al. 2013. Synthetic generation of influenza vaccine viruses for rapid response to pandemics. Sci Transl Med 5: 185ra168.
-
(2013)
Sci Transl Med
, vol.5
-
-
Dormitzer, P.R.1
Suphaphiphat, P.2
Gibson, D.G.3
Wentworth, D.E.4
Stockwell, T.B.5
Algire, M.A.6
Alperovich, N.7
Barro, M.8
Brown, D.M.9
Craig, S.10
-
15
-
-
84913594397
-
Genome editing. The new frontier of genome engineering with CRISPR-Cas9
-
Doudna, JA, Charpentier E. 2014. Genome editing. The new frontier of genome engineering with CRISPR-Cas9. Science 346: 1258096.
-
(2014)
Science
, vol.346
-
-
Doudna, J.A.1
Charpentier, E.2
-
16
-
-
0242275926
-
Depurination as a yield decreasing mechanism in oligodeoxynucleotide synthesis
-
Efcavitch, JW, Heiner C. 1985. Depurination as a yield decreasing mechanism in oligodeoxynucleotide synthesis. Nucleosides Nucleotides 4: 267–267.
-
(1985)
Nucleosides Nucleotides
, vol.4
, pp. 267-268
-
-
Efcavitch, J.W.1
Heiner, C.2
-
17
-
-
56649114274
-
A one pot, one step, precision cloning method with high throughput capability
-
Engler, C, Kandzia R, Marillonnet S. 2008. A one pot, one step, precision cloning method with high throughput capability. PLoS ONE 3: e3647.
-
(2008)
Plos ONE
, vol.3
-
-
Engler, C.1
Kandzia, R.2
Marillonnet, S.3
-
18
-
-
0026108692
-
Light-directed, spatially addressable parallel chemical synthesis
-
Fodor, SP, Read JL, Pirrung MC, Stryer L, Lu AT, Solas D. 1991. Light-directed, spatially addressable parallel chemical synthesis. Science 251: 767–773.
-
(1991)
Science
, vol.251
, pp. 767-773
-
-
Fodor, S.P.1
Read, J.L.2
Pirrung, M.C.3
Stryer, L.4
Lu, A.T.5
Solas, D.6
-
19
-
-
28644447881
-
Removal of mismatched bases from synthetic genes by enzymatic mismatch cleavage
-
Fuhrmann, M, Oertel W, Berthold P, Hegemann P. 2005. Removal of mismatched bases from synthetic genes by enzymatic mismatch cleavage. Nucleic Acids Res 33: e58.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Fuhrmann, M.1
Oertel, W.2
Berthold, P.3
Hegemann, P.4
-
20
-
-
0035890661
-
A flexible lightdirected DNA chip synthesis gated by deprotection using solution photogenerated acids
-
Gao, X, LeProust E, Zhang H, Srivannavit O, Gulari E, Yu P, Nishiguchi C, Xiang Q, Zhou X. 2001. A flexible lightdirected DNA chip synthesis gated by deprotection using solution photogenerated acids. Nucleic Acids Res 29: 4744–4750.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 4744-4750
-
-
Gao, X.1
Leproust, E.2
Zhang, H.3
Srivannavit, O.4
Gulari, E.5
Yu, P.6
Nishiguchi, C.7
Xiang, Q.8
Zhou, X.9
-
21
-
-
73349139923
-
Synthesis of DNA fragments in yeast by one-step assembly of overlapping oligonucleotides
-
Gibson, DG. 2009. Synthesis of DNA fragments in yeast by one-step assembly of overlapping oligonucleotides. Nucleic Acids Res 37: 6984–6990.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 6984-6990
-
-
Gibson, D.G.1
-
22
-
-
79957471219
-
Enzymatic assembly of overlapping DNA fragments
-
Gibson, DG. 2011a. Enzymatic assembly of overlapping DNA fragments. Methods Enzymol 498: 349–361.
-
(2011)
Methods Enzymol
, vol.498
, pp. 349-361
-
-
Gibson, D.G.1
-
23
-
-
84857658214
-
Gene and genome construction in yeast
-
(ed. Ausubel FM et al.), Chapter 3, Unit 3.22. Wiley
-
Gibson, DG. 2011b. Gene and genome construction in yeast. In Current protocols in molecular biology (ed. Ausubel FM et al.), Chapter 3, Unit 3.22. Wiley
-
(2011)
Current Protocols in Molecular Biology
-
-
Gibson, D.G.1
-
24
-
-
84858374402
-
Oligonucleotide assembly in yeast to produce synthetic DNA fragments
-
Hoboken, NJ., Gibson DG. 2012. Oligonucleotide assembly in yeast to produce synthetic DNA fragments. Methods Mol Biol 852: 11–21.
-
(2012)
Methods Mol Biol
, vol.852
, pp. 11-21
-
-
Hoboken, N.J.1
Gibson, D.G.2
-
25
-
-
39449112551
-
Complete chemical synthesis, assembly, and cloning of a Mycoplasma genitalium genome
-
Gibson, DG, Benders GA, Andrews-Pfannkoch C, Denisova EA, Baden-Tillson H, Zaveri J, Stockwell TB, Brownley A, Thomas DW, Algire MA, et al. 2008a. Complete chemical synthesis, assembly, and cloning of a Mycoplasma genitalium genome. Science 319: 1215–1220.
-
(2008)
Science
, vol.319
, pp. 1215-1220
-
-
Gibson, D.G.1
Benders, G.A.2
Rews-Pfannkoch, C.3
Denisova, E.A.4
Baden-Tillson, H.5
Zaveri, J.6
Stockwell, T.B.7
Brownley, A.8
Thomas, D.W.9
Algire, M.A.10
-
26
-
-
58149510036
-
One-step assembly in yeast of 25 overlappingDNA fragments to form acomplete synthetic Mycoplasma genitalium genome
-
Gibson, DG, Benders GA, Axelrod KC, Zaveri J, Algire MA, Moodie M, Montague MG, Venter JC, Smith HO, Hutchison CA III. 2008b. One-step assembly in yeast of 25 overlappingDNA fragments to form acomplete synthetic Mycoplasma genitalium genome. Proc Natl Acad Sci 105: 20404–20409.
-
(2008)
Proc Natl Acad Sci
, vol.105
, pp. 20404-20409
-
-
Gibson, D.G.1
Benders, G.A.2
Axelrod, K.C.3
Zaveri, J.4
Algire, M.A.5
Moodie, M.6
Montague, M.G.7
Venter, J.C.8
Smith, H.O.9
Hutchison, C.10
-
27
-
-
67349270900
-
Enzymatic assembly of DNA molecules up to several hundred kilobases
-
Gibson, DG, Young L, Chuang RY, Venter JC, Hutchison CA III, Smith HO. 2009. Enzymatic assembly of DNA molecules up to several hundred kilobases. Nat Method 6: 343–345.
-
(2009)
Nat Method
, vol.6
, pp. 343-345
-
-
Gibson, D.G.1
Young, L.2
Chuang, R.Y.3
Venter, J.C.4
Hutchison, C.5
Smith, H.O.6
-
28
-
-
78049323797
-
Chemical synthesis of the mouse mitochondrial genome
-
Gibson, DG, Smith HO, Hutchison CA III, Venter JC, Merryman C. 2010. Chemical synthesis of the mouse mitochondrial genome. Nat Method 7: 901–903.
-
(2010)
Nat Method
, vol.7
, pp. 901-903
-
-
Gibson, D.G.1
Smith, H.O.2
Hutchison, C.3
Venter, J.C.4
Merryman, C.5
-
29
-
-
84886824017
-
Rapid, modular and reliable construction of complex mammalian gene circuits
-
Guye, P, Li Y, Wroblewska L, Duportet X, Weiss R. 2013. Rapid, modular and reliable construction of complex mammalian gene circuits. Nucleic Acids Res 41: e156.
-
(2013)
Nucleic Acids Res
, vol.41
-
-
Guye, P.1
Li, Y.2
Wroblewska, L.3
Duportet, X.4
Weiss, R.5
-
31
-
-
84962227074
-
Design and synthesis of a minimal bacterial genome
-
aad6253
-
Hutchison, CA 3rd, Chuang RY, Noskov VN, Assad-Garcia N, Deerinck TJ, Ellisman MH, Gill J, Kannan K, Karas BJ, Ma L, et al. 2016. Design and synthesis of a minimal bacterial genome. Science 351: aad6253.
-
(2016)
Science
, vol.351
-
-
Hutchison, C.A.1
Chuang, R.Y.2
Noskov, V.N.3
Assad-Garcia, N.4
Deerinck, T.J.5
Ellisman, M.H.6
Gill, J.7
Kannan, K.8
Karas, B.J.9
Ma, L.10
-
32
-
-
0017697097
-
Expression in Escherichia coli of a chemically synthesized gene for the hormone somatostatin
-
Itakura, K, Hirose T, Crea R, Riggs AD, Heyneker HL, Bolivar F, Boyer HW. 1977. Expression in Escherichia coli of a chemically synthesized gene for the hormone somatostatin. Science 198: 1056–1063.
-
(1977)
Science
, vol.198
, pp. 1056-1063
-
-
Itakura, K.1
Hirose, T.2
Crea, R.3
Riggs, A.D.4
Heyneker, H.L.5
Bolivar, F.6
Boyer, H.W.7
-
33
-
-
0025759897
-
Polymerase chain reaction–mediated gene synthesis: Synthesis of a gene coding for isozyme c of horseradish peroxidase
-
Jayaraman, K, Fingar SA, Shah J, Fyles J. 1991. Polymerase chain reaction–mediated gene synthesis: Synthesis of a gene coding for isozyme c of horseradish peroxidase. Proc Natl Acad Sci 88: 4084–4088.
-
(1991)
Proc Natl Acad Sci
, vol.88
, pp. 4084-4088
-
-
Jayaraman, K.1
Fingar, S.A.2
Shah, J.3
Fyles, J.4
-
34
-
-
0014397822
-
Progress in the total synthesis of the gene for ala-tRNA
-
Khorana, HG, Buchi H, Caruthers MH, Chang SH, Gupta NK, Kumar A, Ohtsuka E, Sgaramella V, Weber H. 1968. Progress in the total synthesis of the gene for ala-tRNA. Cold Spring Harb Symp Quant Biol 33: 35–44.
-
(1968)
Cold Spring Harb Symp Quant Biol
, vol.33
, pp. 35-44
-
-
Khorana, H.G.1
Buchi, H.2
Caruthers, M.H.3
Chang, S.H.4
Gupta, N.K.5
Kumar, A.6
Ohtsuka, E.7
Sgaramella, V.8
Weber, H.9
-
35
-
-
0015527778
-
Studies on polynucleotides. 103. Total synthesis of the structural gene for an alanine transfer ribonucleic acid from yeast
-
Khorana, HG, Agarwal KL, Buchi H, Caruthers MH, Gupta NK, Kleppe K, Kumar A, Otsuka E, RajBhandary UL, Van de Sande JH, et al. 1972. Studies on polynucleotides. 103. Total synthesis of the structural gene for an alanine transfer ribonucleic acid from yeast. J Mol Biol 72: 209–217.
-
(1972)
J Mol Biol
, vol.72
, pp. 209-217
-
-
Khorana, H.G.1
Agarwal, K.L.2
Buchi, H.3
Caruthers, M.H.4
Gupta, N.K.5
Kleppe, K.6
Kumar, A.7
Otsuka, E.8
Rajbhandary, U.L.9
Van De Sande, J.H.10
-
36
-
-
84867546617
-
Shotgun DNA synthesis” for the highthroughput construction of large DNA molecules
-
Kim, H, Han H, Ahn J, Lee J, Cho N, Jang H, Kim H, Kwon S, Bang D. 2012. “Shotgun DNA synthesis” for the highthroughput construction of large DNA molecules. Nucleic Acids Res 40: e140.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Kim, H.1
Han, H.2
Ahn, J.3
Lee, J.4
Cho, N.5
Jang, H.6
Kim, H.7
Kwon, S.8
Bang, D.9
-
37
-
-
84963894167
-
Multiplex pairwise assembly of array-derived DNA oligonucleotides
-
Klein, JC, Lajoie MJ, Schwartz JJ, Strauch EM, Nelson J, Baker D, Shendure J. 2016. Multiplex pairwise assembly of array-derived DNA oligonucleotides. Nucleic Acids Res 44: e43.
-
(2016)
Nucleic Acids Res
, vol.44
-
-
Klein, J.C.1
Lajoie, M.J.2
Schwartz, J.J.3
Strauch, E.M.4
Nelson, J.5
Baker, D.6
Shendure, J.7
-
38
-
-
8144226497
-
Total synthesis of long DNA sequences: Synthesis of a contiguous 32-kb polyketide synthase gene cluster
-
Kodumal, SJ, Patel KG, Reid R, Menzella HG, Welch M, Santi DV. 2004. Total synthesis of long DNA sequences: Synthesis of a contiguous 32-kb polyketide synthase gene cluster. Proc Natl Acad Sci 101: 15573–15578.
-
(2004)
Proc Natl Acad Sci
, vol.101
, pp. 15573-15578
-
-
Kodumal, S.J.1
Patel, K.G.2
Reid, R.3
Menzella, H.G.4
Welch, M.5
Santi, D.V.6
-
39
-
-
84899696363
-
Large-scale de novo DNA synthesis: Technologies and applications
-
Kosuri, S, Church GM. 2014. Large-scale de novo DNA synthesis: Technologies and applications. Nat Method 11: 499–507.
-
(2014)
Nat Method
, vol.11
, pp. 499-507
-
-
Kosuri, S.1
Church, G.M.2
-
40
-
-
78650021707
-
Scalable gene synthesis by selective amplification of DNA pools from high-fidelity microchips
-
Kosuri, S, Eroshenko N, Leproust EM, Super M, Way J, Li JB, Church GM. 2010. Scalable gene synthesis by selective amplification of DNA pools from high-fidelity microchips. Nat Biotechnol 28: 1295–1299.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 1295-1299
-
-
Kosuri, S.1
Eroshenko, N.2
Leproust, E.M.3
Super, M.4
Way, J.5
Li, J.B.6
Church, G.M.7
-
41
-
-
80053175916
-
BglBrick vectors and datasheets: A synthetic biology platform for gene expression
-
Lee, TS, Krupa RA, Zhang F, Hajimorad M, Holtz WJ, Prasad N, Lee SK, Keasling JD. 2011. BglBrick vectors and datasheets: A synthetic biology platform for gene expression. J Biol Eng 5: 12.
-
(2011)
J Biol Eng
, vol.5
, pp. 12
-
-
Lee, T.S.1
Krupa, R.A.2
Zhang, F.3
Hajimorad, M.4
Holtz, W.J.5
Prasad, N.6
Lee, S.K.7
Keasling, J.D.8
-
42
-
-
77952530236
-
Synthesis of highquality libraries of long (150mer) oligonucleotides by a novel depurination controlled process
-
LeProust EM, Peck BJ, Spirin K, McCuen HB, Moore B, Namsaraev E, Caruthers MH. 2010. Synthesis of highquality libraries of long (150mer) oligonucleotides by a novel depurination controlled process. Nucleic Acids Res 38: 2522–2540.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 2522-2540
-
-
Leproust, E.M.1
Peck, B.J.2
Spirin, K.3
McCuen, H.B.4
Moore, B.5
Namsaraev, E.6
Caruthers, M.H.7
-
43
-
-
33847608289
-
Harnessing homologous recombination in vitro to generate recombinant DNA via SLIC
-
Li, MZ, Elledge SJ. 2007. Harnessing homologous recombination in vitro to generate recombinant DNA via SLIC. Nat Method 4: 251–256.
-
(2007)
Nat Method
, vol.4
, pp. 251-256
-
-
Li, M.Z.1
Elledge, S.J.2
-
44
-
-
84865283376
-
DNA synthesis, assembly and applications in synthetic biology
-
Ma, S, Tang N, Tian J. 2012. DNA synthesis, assembly and applications in synthetic biology. Curr Opin Chem Biol 16: 260–267.
-
(2012)
Curr Opin Chem Biol
, vol.16
, pp. 260-267
-
-
Ma, S.1
Tang, N.2
Tian, J.3
-
45
-
-
78650023082
-
High-fidelity gene synthesis by retrieval of sequence-verified DNA identified using high-throughput pyrosequencing
-
Matzas, M, Stahler PF, Kefer N, Siebelt N, Boisguerin V, Leonard JT, Keller A, Stahler CF, Haberle P, Gharizadeh B, et al. 2010. High-fidelity gene synthesis by retrieval of sequence-verified DNA identified using high-throughput pyrosequencing. Nat Biotechnol 28: 1291–1294.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 1291-1294
-
-
Matzas, M.1
Stahler, P.F.2
Kefer, N.3
Siebelt, N.4
Boisguerin, V.5
Leonard, J.T.6
Keller, A.7
Stahler, C.F.8
Haberle, P.9
Gharizadeh, B.10
-
46
-
-
84963568291
-
Genetic circuit design automation
-
aac7341
-
Nielsen, AA, Der BS, Shin J, Vaidyanathan P, Paralanov V, Strychalski EA, Ross D, Densmore D, Voigt CA. 2016. Genetic circuit design automation. Science 352: aac7341.
-
(2016)
Science
, vol.352
-
-
Nielsen, A.A.1
Der, B.S.2
Shin, J.3
Vaidyanathan, P.4
Paralanov, V.5
Strychalski, E.A.6
Ross, D.7
Densmore, D.8
Voigt, C.A.9
-
47
-
-
84863230316
-
Massively parallel functional dissection of mammalian enhancers in vivo
-
Patwardhan, RP, Hiatt JB, Witten DM, Kim MJ, Smith RP, May D, Lee C, Andrie JM, Lee SI, Cooper GM, et al. 2012. Massively parallel functional dissection of mammalian enhancers in vivo. Nat Biotechnol 30: 265–270.
-
(2012)
Nat Biotechnol
, vol.30
, pp. 265-270
-
-
Patwardhan, R.P.1
Hiatt, J.B.2
Witten, D.M.3
Kim, M.J.4
Smith, R.P.5
May, D.6
Lee, C.7
Rie, J.M.8
Lee, S.I.9
Cooper, G.M.10
-
48
-
-
0028246289
-
Light-generated oligonucleotide arrays for rapid DNA sequence analysis
-
Pease, AC, Solas D, Sullivan EJ, Cronin MT, Holmes CP, Fodor SP. 1994. Light-generated oligonucleotide arrays for rapid DNA sequence analysis. Proc Natl Acad Sci 91: 5022–5026.
-
(1994)
Proc Natl Acad Sci
, vol.91
, pp. 5022-5026
-
-
Pease, A.C.1
Solas, D.2
Sullivan, E.J.3
Cronin, M.T.4
Holmes, C.P.5
Fodor, S.P.6
-
49
-
-
68149136937
-
Circular polymerase extension cloning of complex gene libraries and pathways
-
Quan, J, Tian J. 2009. Circular polymerase extension cloning of complex gene libraries and pathways. PLoS ONE 4: e6441.
-
(2009)
Plos ONE
, vol.4
-
-
Quan, J.1
Tian, J.2
-
50
-
-
79955773387
-
Parallel on-chip gene synthesis and application to optimization of protein expression
-
Quan, J, Saaem I, Tang N, Ma S, Negre N, Gong H, White KP, Tian J. 2011. Parallel on-chip gene synthesis and application to optimization of protein expression. Nat Biotechnol 29: 449–452.
-
(2011)
Nat Biotechnol
, vol.29
, pp. 449-452
-
-
Quan, J.1
Saaem, I.2
Tang, N.3
Ma, S.4
Negre, N.5
Gong, H.6
White, K.P.7
Tian, J.8
-
51
-
-
0031695677
-
Mer- Made: An oligodeoxyribonucleotide synthesizer for high throughput oligonucleotide production in dual 96-well plates
-
Rayner, S, Brignac S, Bumeister R, Belosludtsev Y, Ward T, Grant O, O’Brien K, Evans GA, Garner HR. 1998. Mer- Made: An oligodeoxyribonucleotide synthesizer for high throughput oligonucleotide production in dual 96-well plates. Genome Res 8: 741–747.
-
(1998)
Genome Res
, vol.8
, pp. 741-747
-
-
Rayner, S.1
Brignac, S.2
Bumeister, R.3
Belosludtsev, Y.4
Ward, T.5
Grant, O.6
O’Brien, K.7
Evans, G.A.8
Garner, H.R.9
-
52
-
-
4644244121
-
Amplification and assembly of chip-elutedDNA (AACED): A method for high-throughput gene synthesis
-
Richmond, KE, Li MH, Rodesch MJ, Patel M, Lowe AM, Kim C, Chu LL, Venkataramaian N, Flickinger SF, Kaysen J, et al. 2004. Amplification and assembly of chip-elutedDNA (AACED): A method for high-throughput gene synthesis. Nucleic Acids Res 32: 5011–5018.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 5011-5018
-
-
Richmond, K.E.1
Li, M.H.2
Rodesch, M.J.3
Patel, M.4
Lowe, A.M.5
Kim, C.6
Chu, L.L.7
Venkataramaian, N.8
Flickinger, S.F.9
Kaysen, J.10
-
53
-
-
84888605243
-
Synthesis ofDNA/RNA and their analogs via phosphoramidite and H-phosphonate chemistries
-
Roy, S, Caruthers M. 2013. Synthesis ofDNA/RNA and their analogs via phosphoramidite and H-phosphonate chemistries. Molecules 18: 14268–14284.
-
(2013)
Molecules
, vol.18
, pp. 14268-14284
-
-
Roy, S.1
Caruthers, M.2
-
54
-
-
84973325042
-
Synthetic mixed-signal computation in living cells
-
Rubens, JR, Selvaggio G, Lu TK. 2016. Synthetic mixed-signal computation in living cells. Nat Commun 7: 11658.
-
(2016)
Nat Commun
, vol.7
, pp. 11658
-
-
Rubens, J.R.1
Selvaggio, G.2
Lu, T.K.3
-
55
-
-
77952312451
-
In situ synthesis ofDNA microarrayon functionalized cyclic olefin copolymer substrate
-
Saaem, I, Ma KS, Marchi AN, LaBean TH, Tian J. 2010. In situ synthesis ofDNA microarrayon functionalized cyclic olefin copolymer substrate. ACS Appl Mater Interfaces 2: 491–497.
-
(2010)
ACS Appl Mater Interfaces
, vol.2
, pp. 491-497
-
-
Saaem, I.1
Ma, K.S.2
Marchi, A.N.3
Labean, T.H.4
Tian, J.5
-
56
-
-
84856939965
-
Error correction of microchip synthesized genes using Surveyor nuclease
-
Saaem, I, Ma S, Quan J, Tian J. 2012. Error correction of microchip synthesized genes using Surveyor nuclease. Nucleic Acids Res 40: e23.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Saaem, I.1
Ma, S.2
Quan, J.3
Tian, J.4
-
57
-
-
70349964350
-
Automated design of synthetic ribosome binding sites to control protein expression
-
Salis, HM, Mirsky EA, Voigt CA. 2009. Automated design of synthetic ribosome binding sites to control protein expression. Nat Biotechnol 27: 946–950.
-
(2009)
Nat Biotechnol
, vol.27
, pp. 946-950
-
-
Salis, H.M.1
Mirsky, E.A.2
Voigt, C.A.3
-
58
-
-
84899704095
-
The rise of a digital immune system
-
Schatz, MC, Phillippy AM. 2012. The rise of a digital immune system. GigaScience 1: 4.
-
(2012)
Gigascience
, vol.1
, pp. 4
-
-
Schatz, M.C.1
Phillippy, A.M.2
-
60
-
-
84866128726
-
Accurate gene synthesis with tag-directed retrieval of sequence-verified DNA molecules
-
Schwartz, JJ, Lee C, Shendure J. 2012.Accurate gene synthesis with tag-directed retrieval of sequence-verified DNA molecules. Nat Method 9: 913–915.
-
(2012)
Nat Method
, vol.9
, pp. 913-915
-
-
Schwartz, J.J.1
Lee, C.2
Shendure, J.3
-
61
-
-
0017281959
-
Total synthesis of the structural gene for the precursor of a tyrosine suppressor transfer RNA from Escherichia coli. 7. Enzymatic joining of the chemically synthesized segments to form a DNA duplex corresponding to the nucleotide sequence 1-26
-
Sekiya, T, Besmer P, Takeya T, Khorana HG. 1976. Total synthesis of the structural gene for the precursor of a tyrosine suppressor transfer RNA from Escherichia coli. 7. Enzymatic joining of the chemically synthesized segments to form a DNA duplex corresponding to the nucleotide sequence 1-26. J Biol Chem 251: 634–641.
-
(1976)
J Biol Chem
, vol.251
, pp. 634-641
-
-
Sekiya, T.1
Besmer, P.2
Takeya, T.3
Khorana, H.G.4
-
62
-
-
0018786879
-
Total synthesis of a tyrosine suppressor transfer RNA gene. XVI: Enzymatic joinings to form the total 207-base pair-long DNA
-
Sekiya, T, Takeya T, Brown EL, Belagaje R, Contreras R, Fritz HJ, Gait MJ, Lees RG, Ryan MJ, Khorana HG. 1979. Total synthesis of a tyrosine suppressor transfer RNA gene. XVI: Enzymatic joinings to form the total 207-base pair-long DNA. J Biol Chem 254: 5787–5801.
-
(1979)
J Biol Chem
, vol.254
, pp. 5787-5801
-
-
Sekiya, T.1
Takeya, T.2
Brown, E.L.3
Belagaje, R.4
Contreras, R.5
Fritz, H.J.6
Gait, M.J.7
Lees, R.G.8
Ryan, M.J.9
Khorana, H.G.10
-
63
-
-
0029776496
-
Kinetic studies on depurination and detritylation of CPG-bound intermediates during oligonucleotide synthesis
-
Septak, M. 1996. Kinetic studies on depurination and detritylation of CPG-bound intermediates during oligonucleotide synthesis. Nucleic Acids Res 24: 3053–3058.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 3053-3058
-
-
Septak, M.1
-
64
-
-
45149118469
-
Engineering, BioBrick vectors from BioBrick parts
-
Shetty, RP, Endy D, Knight TF Jr. 2008. Engineering, BioBrick vectors from BioBrick parts. J Biol Eng 2: 5.
-
(2008)
J Biol Eng
, vol.2
, pp. 5
-
-
Shetty, R.P.1
Endy, D.2
Knight, T.F.3
-
65
-
-
0032846163
-
Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array
-
Singh-Gasson S, Green RD, Yue Y, Nelson C, Blattner F, Sussman MR, Cerrina F. 1999. Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array. Nat Biotechnol 17: 974–978.
-
(1999)
Nat Biotechnol
, vol.17
, pp. 974-978
-
-
Singh-Gasson, S.1
Green, R.D.2
Yue, Y.3
Nelson, C.4
Blattner, F.5
Sussman, M.R.6
Cerrina, F.7
-
66
-
-
0347364647
-
Generating a synthetic genome by whole genome assembly: WX174 bacteriophage from synthetic oligonucleotides
-
Smith HO, Hutchison CA III, Pfannkoch C, Venter JC. 2003. Generating a synthetic genome by whole genome assembly: wX174 bacteriophage from synthetic oligonucleotides. Proc Natl Acad Sci 100: 15440–15445.
-
(2003)
Proc Natl Acad Sci
, vol.100
, pp. 15440-15445
-
-
Smith, H.O.1
Hutchison, C.2
Pfannkoch, C.3
Venter, J.C.4
-
67
-
-
84940774152
-
Advances in synthetic dynamic circuits design: Using novel synthetic parts to engineer new generations of gene oscillations
-
Sowa, SW, Gelderman G, Contreras LM. 2015. Advances in synthetic dynamic circuits design: Using novel synthetic parts to engineer new generations of gene oscillations. Curr Opin Biotechnol 36: 161–167.
-
(2015)
Curr Opin Biotechnol
, vol.36
, pp. 161-167
-
-
Sowa, S.W.1
Gelderman, G.2
Contreras, L.M.3
-
68
-
-
0028784138
-
Single-step assembly of a gene and entire plasmid from large numbers of oligodeoxyribonucleotides
-
Stemmer, WP, Crameri A, Ha KD, Brennan TM, Heyneker HL. 1995. Single-step assembly of a gene and entire plasmid from large numbers of oligodeoxyribonucleotides. Gene 164: 49–53.
-
(1995)
Gene
, vol.164
, pp. 49-53
-
-
Stemmer, W.P.1
Crameri, A.2
Ha, K.D.3
Brennan, T.M.4
Heyneker, H.L.5
-
69
-
-
84953334273
-
Combinatorial codon scrambling enables scalable gene synthesis and amplification of repetitive proteins
-
Tang, NC, Chilkoti A. 2016. Combinatorial codon scrambling enables scalable gene synthesis and amplification of repetitive proteins. Nat Mater 15: 419–424.
-
(2016)
Nat Mater
, vol.15
, pp. 419-424
-
-
Tang, N.C.1
Chilkoti, A.2
-
70
-
-
84860803588
-
Refactoring the nitrogen fixation gene cluster from Klebsiella oxytoca
-
Temme, K, Zhao D, Voigt CA. 2012. Refactoring the nitrogen fixation gene cluster from Klebsiella oxytoca. Proc Natl Acad Sci 109: 7085–7090.
-
(2012)
Proc Natl Acad Sci
, vol.109
, pp. 7085-7090
-
-
Temme, K.1
Zhao, D.2
Voigt, C.A.3
-
71
-
-
11144247743
-
Accurate multiplex gene synthesis from programmable DNA microchips
-
Tian, J, Gong H, Sheng N, Zhou X, Gulari E, Gao X, Church G. 2004. Accurate multiplex gene synthesis from programmable DNA microchips. Nature 432: 1050–1054.
-
(2004)
Nature
, vol.432
, pp. 1050-1054
-
-
Tian, J.1
Gong, H.2
Sheng, N.3
Zhou, X.4
Gulari, E.5
Gao, X.6
Church, G.7
-
72
-
-
84907021721
-
Unique nucleotide sequence-guided assembly of repetitive DNA parts for synthetic biology applications
-
Torella, JP, Lienert F, Boehm CR, Chen JH, Way JC, Silver PA. 2014. Unique nucleotide sequence-guided assembly of repetitive DNA parts for synthetic biology applications. Nat Protoc 9: 2075–2089.
-
(2014)
Nat Protoc
, vol.9
, pp. 2075-2089
-
-
Torella, J.P.1
Lienert, F.2
Boehm, C.R.3
Chen, J.H.4
Way, J.C.5
Silver, P.A.6
-
73
-
-
84928400677
-
PaperClip: Rapid multi-part DNA assembly from existing libraries
-
Trubitsyna, M, Michlewski G, Cai Y, Elfick A, French CE. 2014. PaperClip: Rapid multi-part DNA assembly from existing libraries. Nucleic Acids Res 42: e154.
-
(2014)
Nucleic Acids Res
, vol.42
-
-
Trubitsyna, M.1
Michlewski, G.2
Cai, Y.3
Elfick, A.4
French, C.E.5
-
74
-
-
84903999313
-
Error removal in microchip-synthesized DNAusing immobilizedMutS
-
Wan W, Li L, Xu Q, Wang Z, Yao Y, Wang R, Zhang J, Liu H, Gao X, Hong J. 2014. Error removal in microchip-synthesized DNAusing immobilizedMutS. Nucleic Acids Res 42: e102.
-
(2014)
Nucleic Acids Res
, vol.42
-
-
Wan, W.1
Li, L.2
Xu, Q.3
Wang, Z.4
Yao, Y.5
Wang, R.6
Zhang, J.7
Liu, H.8
Gao, X.9
Hong, J.10
-
75
-
-
68949161807
-
Programming cells by multiplex genome engineering and accelerated evolution
-
Wang, HH, Isaacs FJ, Carr PA, Sun ZZ, Xu G, Forest CR, Church GM. 2009. Programming cells by multiplex genome engineering and accelerated evolution. Nature 460: 894–898.
-
(2009)
Nature
, vol.460
, pp. 894-898
-
-
Wang, H.H.1
Isaacs, F.J.2
Carr, P.A.3
Sun, Z.Z.4
Xu, G.5
Forest, C.R.6
Church, G.M.7
-
76
-
-
77955459156
-
Rapid profiling of a microbial genome using mixtures of barcoded oligonucleotides
-
Warner, JR, Reeder PJ, Karimpour-Fard A, Woodruff LB, Gill RT. 2010. Rapid profiling of a microbial genome using mixtures of barcoded oligonucleotides. Nat Biotechnol 28: 856–862.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 856-862
-
-
Warner, J.R.1
Reeder, P.J.2
Karimpour-Fard, A.3
Woodruff, L.B.4
Gill, R.T.5
-
77
-
-
42149130929
-
Chemical gene synthesis: Strategies, softwares, error corrections, and applications
-
Xiong, AS, Peng RH, Zhuang J, Gao F, Li Y, Cheng ZM, Yao QH. 2008a. Chemical gene synthesis: Strategies, softwares, error corrections, and applications. FEMS Microbiol Rev 32: 522–540.
-
(2008)
FEMS Microbiol Rev
, vol.32
, pp. 522-540
-
-
Xiong, A.S.1
Peng, R.H.2
Zhuang, J.3
Gao, F.4
Li, Y.5
Cheng, Z.M.6
Yao, Q.H.7
-
78
-
-
38349065060
-
Non-polymerase-cycling-assembly- based chemical gene synthesis: Strategies, methods, and progress
-
Xiong, AS, Peng RH, Zhuang J, Liu JG, Gao F, Chen JM, Cheng ZM, Yao QH. 2008b. Non-polymerase-cycling-assembly- based chemical gene synthesis: Strategies, methods, and progress. Biotechnol Adv 26: 121–134.
-
(2008)
Biotechnol Adv
, vol.26
, pp. 121-134
-
-
Xiong, A.S.1
Peng, R.H.2
Zhuang, J.3
Liu, J.G.4
Gao, F.5
Chen, J.M.6
Cheng, Z.M.7
Yao, Q.H.8
-
79
-
-
17044455338
-
Two-step total gene synthesis method
-
Young, L, Dong Q. 2004. Two-step total gene synthesis method. Nucleic Acids Res 32: e59.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Young, L.1
Dong, Q.2
-
80
-
-
6044251178
-
Microfluidic, PicoArray synthesis of oligodeoxynucleotides and simultaneous assembling of multiple DNA sequences
-
Zhou, X, Cai S, Hong A, You Q, Yu P, Sheng N, Srivannavit O, Muranjan S, Rouillard JM, Xia Y, et al. 2004. Microfluidic, PicoArray synthesis of oligodeoxynucleotides and simultaneous assembling of multiple DNA sequences. Nucleic Acids Res 32: 5409–5417.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 5409-5417
-
-
Zhou, X.1
Cai, S.2
Hong, A.3
You, Q.4
Yu, P.5
Sheng, N.6
Srivannavit, O.7
Muranjan, S.8
Rouillard, J.M.9
Xia, Y.10
|