-
1
-
-
65649115267
-
Recognition and processing of ubiquitin-protein conjugates by the proteasome
-
Finley D (2009) Recognition and processing of ubiquitin-protein conjugates by the proteasome. Annu Rev Biochem 78(1):477-513.
-
(2009)
Annu Rev Biochem
, vol.78
, Issue.1
, pp. 477-513
-
-
Finley, D.1
-
2
-
-
84979266913
-
The ubiquitin-proteasome system and autophagy: Coordinated and independent activities
-
Cohen-Kaplan V, Livneh I, Avni N, Cohen-Rosenzweig C, Ciechanover A (2016) The ubiquitin-proteasome system and autophagy: Coordinated and independent activities. Int J Biochem Cell Biol, 10.1016/j.biocel.2016.07.019.
-
(2016)
Int J Biochem Cell Biol
-
-
Cohen-Kaplan, V.1
Livneh, I.2
Avni, N.3
Cohen-Rosenzweig, C.4
Ciechanover, A.5
-
3
-
-
84896270715
-
Quality control. ER-associated degradation: Protein quality control and beyond
-
Ruggiano A, Foresti O, Carvalho P (2014) Quality control. ER-associated degradation: Protein quality control and beyond. J Cell Biol 204(6):869-879.
-
(2014)
J Cell Biol
, vol.204
, Issue.6
, pp. 869-879
-
-
Ruggiano, A.1
Foresti, O.2
Carvalho, P.3
-
4
-
-
0036083396
-
The ubiquitin-proteasome proteolytic pathway: Destruction for the sake of construction
-
Glickman MH, Ciechanover A (2002) The ubiquitin-proteasome proteolytic pathway: Destruction for the sake of construction. Physiol Rev 82(2):373-428.
-
(2002)
Physiol Rev
, vol.82
, Issue.2
, pp. 373-428
-
-
Glickman, M.H.1
Ciechanover, A.2
-
5
-
-
4544290828
-
Protein degradation: Recognition of ubiquitinylated substrates
-
Hartmann-Petersen R, Gordon C (2004) Protein degradation: Recognition of ubiquitinylated substrates. Curr Biol 14(18):R754-R756.
-
(2004)
Curr Biol
, vol.14
, Issue.18
, pp. R754-R756
-
-
Hartmann-Petersen, R.1
Gordon, C.2
-
6
-
-
84952639230
-
Gates, channels, and switches: Elements of the proteasome machine
-
Finley D, Chen X, Walters KJ (2016) Gates, channels, and switches: Elements of the proteasome machine. Trends Biochem Sci 41(1):77-93.
-
(2016)
Trends Biochem Sci
, vol.41
, Issue.1
, pp. 77-93
-
-
Finley, D.1
Chen, X.2
Walters, K.J.3
-
7
-
-
84878942836
-
Molecular architecture and assembly of the eukaryotic proteasome
-
Tomko RJ, Jr, Hochstrasser M (2013) Molecular architecture and assembly of the eukaryotic proteasome. Annu Rev Biochem 82:415-445.
-
(2013)
Annu Rev Biochem
, vol.82
, pp. 415-445
-
-
Tomko, R.J.1
Hochstrasser, M.2
-
8
-
-
0033618256
-
Subcellular localization, stoichiometry, and protein levels of 26 S proteasome subunits in yeast
-
Russell SJ, Steger KA, Johnston SA (1999) Subcellular localization, stoichiometry, and protein levels of 26 S proteasome subunits in yeast. J Biol Chem 274(31):21943-21952.
-
(1999)
J Biol Chem
, vol.274
, Issue.31
, pp. 21943-21952
-
-
Russell, S.J.1
Steger, K.A.2
Johnston, S.A.3
-
9
-
-
0028293111
-
The role of the proteasome in cellular protein degradation
-
Driscoll J (1994) The role of the proteasome in cellular protein degradation. Histol Histopathol 9(1):197-202.
-
(1994)
Histol Histopathol
, vol.9
, Issue.1
, pp. 197-202
-
-
Driscoll, J.1
-
10
-
-
34548259958
-
p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy
-
Pankiv S, et al. (2007) p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy. J Biol Chem 282(33):24131-24145.
-
(2007)
J Biol Chem
, vol.282
, Issue.33
, pp. 24131-24145
-
-
Pankiv, S.1
-
12
-
-
84892160984
-
Autophagy as a defence against intracellular pathogens
-
Wileman T (2013) Autophagy as a defence against intracellular pathogens. Essays Biochem 55:153-163.
-
(2013)
Essays Biochem
, vol.55
, pp. 153-163
-
-
Wileman, T.1
-
13
-
-
37649005234
-
Autophagy in the pathogenesis of disease
-
Levine B, Kroemer G (2008) Autophagy in the pathogenesis of disease. Cell 132(1):27-42.
-
(2008)
Cell
, vol.132
, Issue.1
, pp. 27-42
-
-
Levine, B.1
Kroemer, G.2
-
14
-
-
79959415069
-
Biogenesis and cargo selectivity of autophagosomes
-
Weidberg H, Shvets E, Elazar Z (2011) Biogenesis and cargo selectivity of autophagosomes. Annu Rev Biochem 80:125-156.
-
(2011)
Annu Rev Biochem
, vol.80
, pp. 125-156
-
-
Weidberg, H.1
Shvets, E.2
Elazar, Z.3
-
15
-
-
38949096081
-
Sorting, recognition and activation of the misfolded protein degradation pathways through macroautophagy and the proteasome
-
Ding WX, Yin XM (2008) Sorting, recognition and activation of the misfolded protein degradation pathways through macroautophagy and the proteasome. Autophagy 4(2):141-150.
-
(2008)
Autophagy
, vol.4
, Issue.2
, pp. 141-150
-
-
Ding, W.X.1
Yin, X.M.2
-
16
-
-
84855645313
-
Mechanisms of autophagosome biogenesis
-
Rubinsztein DC, Shpilka T, Elazar Z (2012) Mechanisms of autophagosome biogenesis. Curr Biol 22(1):R29-R34.
-
(2012)
Curr Biol
, vol.22
, Issue.1
, pp. R29-R34
-
-
Rubinsztein, D.C.1
Shpilka, T.2
Elazar, Z.3
-
17
-
-
79952355107
-
Selective autophagy mediated by autophagic adapter proteins
-
Johansen T, Lamark T (2011) Selective autophagy mediated by autophagic adapter proteins. Autophagy 7(3):279-296.
-
(2011)
Autophagy
, vol.7
, Issue.3
, pp. 279-296
-
-
Johansen, T.1
Lamark, T.2
-
18
-
-
80052405329
-
Crystal structure of the ubiquitin-associated (UBA) domain of p62 and its interaction with ubiquitin
-
Isogai S, et al. (2011) Crystal structure of the ubiquitin-associated (UBA) domain of p62 and its interaction with ubiquitin. J Biol Chem 286(36):31864-31874.
-
(2011)
J Biol Chem
, vol.286
, Issue.36
, pp. 31864-31874
-
-
Isogai, S.1
-
19
-
-
59249105964
-
Monitoring autophagic degradation of p62/SQSTM1
-
Bjørkøy G, et al. (2009) Monitoring autophagic degradation of p62/SQSTM1. Methods Enzymol 452:181-197.
-
(2009)
Methods Enzymol
, vol.452
, pp. 181-197
-
-
Bjørkøy, G.1
-
20
-
-
65549142204
-
A role for ubiquitin in selective autophagy
-
Kirkin V, McEwan DG, Novak I, Dikic I (2009) A role for ubiquitin in selective autophagy. Mol Cell 34(3):259-269.
-
(2009)
Mol Cell
, vol.34
, Issue.3
, pp. 259-269
-
-
Kirkin, V.1
McEwan, D.G.2
Novak, I.3
Dikic, I.4
-
21
-
-
53049103308
-
Structural basis for sorting mechanism of p62 in selective autophagy
-
Ichimura Y, et al. (2008) Structural basis for sorting mechanism of p62 in selective autophagy. J Biol Chem 283(33):22847-22857.
-
(2008)
J Biol Chem
, vol.283
, Issue.33
, pp. 22847-22857
-
-
Ichimura, Y.1
-
22
-
-
4444220680
-
Sequestosome 1/p62 is a polyubiquitin chain binding protein involved in ubiquitin proteasome degradation
-
Seibenhener ML, et al. (2004) Sequestosome 1/p62 is a polyubiquitin chain binding protein involved in ubiquitin proteasome degradation. Mol Cell Biol 24(18):8055-8068.
-
(2004)
Mol Cell Biol
, vol.24
, Issue.18
, pp. 8055-8068
-
-
Seibenhener, M.L.1
-
23
-
-
84930353020
-
The protein quality control machinery regulates its misassembled proteasome subunits
-
Peters LZ, et al. (2015) The protein quality control machinery regulates its misassembled proteasome subunits. PLoS Genet 11(4):e1005178.
-
(2015)
PLoS Genet
, vol.11
, Issue.4
, pp. e1005178
-
-
Peters, L.Z.1
-
24
-
-
0024591394
-
Half-life of proteasomes (multiprotease complexes) in rat liver
-
Tanaka K, Ichihara A (1989) Half-life of proteasomes (multiprotease complexes) in rat liver. Biochem Biophys Res Commun 159(3):1309-1315.
-
(1989)
Biochem Biophys Res Commun
, vol.159
, Issue.3
, pp. 1309-1315
-
-
Tanaka, K.1
Ichihara, A.2
-
26
-
-
84982921570
-
Numerous proteins with unique characteristics are degraded by the 26S proteasome following monoubiquitination
-
Braten O, et al. (2016) Numerous proteins with unique characteristics are degraded by the 26S proteasome following monoubiquitination. Proc Natl Acad Sci USA 113(32):E4639-E4647.
-
(2016)
Proc Natl Acad Sci USA
, vol.113
, Issue.32
, pp. E4639-E4647
-
-
Braten, O.1
-
28
-
-
84900862275
-
Autoubiquitination of the 26S proteasome on Rpn13 regulates breakdown of ubiquitin conjugates
-
Besche HC, et al. (2014) Autoubiquitination of the 26S proteasome on Rpn13 regulates breakdown of ubiquitin conjugates. EMBO J 33(10):1159-1176.
-
(2014)
EMBO J
, vol.33
, Issue.10
, pp. 1159-1176
-
-
Besche, H.C.1
-
29
-
-
58549084167
-
Ubiquitin signals autophagic degradation of cytosolic proteins and peroxisomes
-
Kim PK, Hailey DW, Mullen RT, Lippincott-Schwartz J (2008) Ubiquitin signals autophagic degradation of cytosolic proteins and peroxisomes. Proc Natl Acad Sci USA 105(52):20567-20574.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.52
, pp. 20567-20574
-
-
Kim, P.K.1
Hailey, D.W.2
Mullen, R.T.3
Lippincott-Schwartz, J.4
-
30
-
-
75949130828
-
PINK1/Parkin-mediated mitophagy is dependent on VDAC1 and p62/SQSTM1
-
Geisler S, et al. (2010) PINK1/Parkin-mediated mitophagy is dependent on VDAC1 and p62/SQSTM1. Nat Cell Biol 12(2):119-131.
-
(2010)
Nat Cell Biol
, vol.12
, Issue.2
, pp. 119-131
-
-
Geisler, S.1
-
32
-
-
79551598347
-
AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1
-
Kim J, Kundu M, Viollet B, Guan K-L (2011) AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1. Nat Cell Biol 13(2):132-141.
-
(2011)
Nat Cell Biol
, vol.13
, Issue.2
, pp. 132-141
-
-
Kim, J.1
Kundu, M.2
Viollet, B.3
Guan, K.-L.4
-
33
-
-
84899155528
-
Significant role of PB1 and UBA domains in multimerization of Joka2, a selective autophagy cargo receptor from tobacco
-
Zientara-Rytter K, Sirko A (2014) Significant role of PB1 and UBA domains in multimerization of Joka2, a selective autophagy cargo receptor from tobacco. Front Plant Sci 5:13.
-
(2014)
Front Plant Sci
, vol.5
, pp. 13
-
-
Zientara-Rytter, K.1
Sirko, A.2
-
35
-
-
0036678959
-
Role and function of the 26S proteasome in proliferation and apoptosis
-
Naujokat C, Hoffmann S (2002) Role and function of the 26S proteasome in proliferation and apoptosis. Lab Invest 82(8):965-980.
-
(2002)
Lab Invest
, vol.82
, Issue.8
, pp. 965-980
-
-
Naujokat, C.1
Hoffmann, S.2
-
36
-
-
0346727127
-
Protein degradation and protection against misfolded or damaged proteins
-
Goldberg AL (2003) Protein degradation and protection against misfolded or damaged proteins. Nature 426(6968):895-899.
-
(2003)
Nature
, vol.426
, Issue.6968
, pp. 895-899
-
-
Goldberg, A.L.1
-
37
-
-
84937574462
-
Autophagic degradation of the 26S proteasome is mediated by the dual ATG8/ubiquitin receptor RPN10 in Arabidopsis
-
Marshall RS, Li F, Gemperline DC, Book AJ, Vierstra RD (2015) Autophagic degradation of the 26S proteasome is mediated by the dual ATG8/ubiquitin receptor RPN10 in Arabidopsis. Mol Cell 58(6):1053-1066.
-
(2015)
Mol Cell
, vol.58
, Issue.6
, pp. 1053-1066
-
-
Marshall, R.S.1
Li, F.2
Gemperline, D.C.3
Book, A.J.4
Vierstra, R.D.5
-
38
-
-
84964674982
-
Starvation induces proteasome autophagy with different pathways for core and regulatory particle
-
Waite KA, De La Mota-Peynado A, Vontz G, Roelofs J (2015) Starvation induces proteasome autophagy with different pathways for core and regulatory particle. J Biol Chem 291(7):3239-3253.
-
(2015)
J Biol Chem
, vol.291
, Issue.7
, pp. 3239-3253
-
-
Waite, K.A.1
De La Mota-Peynado, A.2
Vontz, G.3
Roelofs, J.4
-
39
-
-
0028797005
-
Degradation of proteasomes by lysosomes in rat liver
-
Cuervo AM, Palmer A, Rivett AJ, Knecht E (1995) Degradation of proteasomes by lysosomes in rat liver. Eur J Biochem 227(3):792-800.
-
(1995)
Eur J Biochem
, vol.227
, Issue.3
, pp. 792-800
-
-
Cuervo, A.M.1
Palmer, A.2
Rivett, A.J.3
Knecht, E.4
-
40
-
-
84938358117
-
Rapid parallel measurements of macroautophagy and mitophagy in mammalian cells using a single fluorescent biosensor
-
Sargsyan A, et al. (2015) Rapid parallel measurements of macroautophagy and mitophagy in mammalian cells using a single fluorescent biosensor. Sci Rep 5:12397.
-
(2015)
Sci Rep
, vol.5
, pp. 12397
-
-
Sargsyan, A.1
-
41
-
-
0016140019
-
Relationship between degradation rates of proteins in vivo and their susceptibility to lysosomal proteases
-
Segal HI, Winkler JR, Miyagi MP (1974) Relationship between degradation rates of proteins in vivo and their susceptibility to lysosomal proteases. J Biol Chem 249(19):6364-6365.
-
(1974)
J Biol Chem
, vol.249
, Issue.19
, pp. 6364-6365
-
-
Segal, H.I.1
Winkler, J.R.2
Miyagi, M.P.3
-
42
-
-
82455179484
-
Systematic and quantitative assessment of the ubiquitin-modified proteome
-
Kim W, et al. (2011) Systematic and quantitative assessment of the ubiquitin-modified proteome. Mol Cell 44(2):325-340.
-
(2011)
Mol Cell
, vol.44
, Issue.2
, pp. 325-340
-
-
Kim, W.1
-
43
-
-
84867398821
-
The size of the proteasomal substrate determines whether its degradation will be mediated by mono- or polyubiquitylation
-
Shabek N, et al. (2012) The size of the proteasomal substrate determines whether its degradation will be mediated by mono- or polyubiquitylation. Mol Cell 48(1):87-97.
-
(2012)
Mol Cell
, vol.48
, Issue.1
, pp. 87-97
-
-
Shabek, N.1
-
44
-
-
84979306721
-
The life cycle of the 26S proteasome: From birth, through regulation and function, and onto its death
-
Livneh I, Cohen-Kaplan V, Cohen-Rosenzweig C, Avni N, Ciechanover A (2016) The life cycle of the 26S proteasome: From birth, through regulation and function, and onto its death. Cell Res 26(8):869-885.
-
(2016)
Cell Res
, vol.26
, Issue.8
, pp. 869-885
-
-
Livneh, I.1
Cohen-Kaplan, V.2
Cohen-Rosenzweig, C.3
Avni, N.4
Ciechanover, A.5
-
45
-
-
0027418205
-
Measurement of co-localization of objects in dual-colour confocal images
-
Manders EMM, Verbeek FJ, Aten JA (1993) Measurement of co-localization of objects in dual-colour confocal images. J Microsc 169(3):375-382.
-
(1993)
J Microsc
, vol.169
, Issue.3
, pp. 375-382
-
-
Manders, E.M.M.1
Verbeek, F.J.2
Aten, J.A.3
-
46
-
-
0024324489
-
Degradation of proteins with acetylated amino termini by the ubiquitin system
-
Mayer A, Siegel NR, Schwartz AL, Ciechanover A (1989) Degradation of proteins with acetylated amino termini by the ubiquitin system. Science 244(4911):1480-1483.
-
(1989)
Science
, vol.244
, Issue.4911
, pp. 1480-1483
-
-
Mayer, A.1
Siegel, N.R.2
Schwartz, A.L.3
Ciechanover, A.4
-
47
-
-
77953718572
-
Purification of autophagosomes from rat hepatocytes
-
Seglen PO, Brinchmann MF (2010) Purification of autophagosomes from rat hepatocytes. Autophagy 6(4):542-547.
-
(2010)
Autophagy
, vol.6
, Issue.4
, pp. 542-547
-
-
Seglen, P.O.1
Brinchmann, M.F.2
|