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Volumn 16, Issue 7, 2016, Pages

European derived Saccharomyces cerevisiae colonisation of New Zealand vineyards aided by humans

Author keywords

Genomics; Phylogenomics; Population genetics; Saccharomyces cerevisiae; Yeast

Indexed keywords

FOREST; GENOME; HUMAN; MAJOR CLINICAL STUDY; MICROORGANISM; NEW ZEALAND; NEW ZEALANDER; NONHUMAN; PHYLOGENOMICS; POPULATION GENETICS; RADIATION; SACCHAROMYCES CEREVISIAE; VINEYARD; AGRICULTURAL LAND; CLASSIFICATION; DNA SEQUENCE; FUNGAL GENOME; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; PHYLOGEOGRAPHY; VITIS;

EID: 84994750505     PISSN: 15671356     EISSN: 15671364     Source Type: Journal    
DOI: 10.1093/femsyr/fow091     Document Type: Article
Times cited : (20)

References (79)
  • 1
    • 33745890277 scopus 로고    scopus 로고
    • Population structure and gene evolution in Saccharomyces cerevisiae
    • Aa E, Townsend JP, Adams RI et al. Population structure and gene evolution in Saccharomyces cerevisiae. FEMS Yeast Res 2006;6:702-15.
    • (2006) FEMS Yeast Res , vol.6 , pp. 702-715
    • Aa, E.1    Townsend, J.P.2    Adams, R.I.3
  • 2
    • 84945452256 scopus 로고    scopus 로고
    • A population genomics insight into the Mediterranean origins of wine yeast domestication
    • Almeida P, Barbosa R, Zalar P et al. A population genomics insight into the Mediterranean origins of wine yeast domestication. Mol Ecol 2015;24:5412-27.
    • (2015) Mol Ecol , vol.24 , pp. 5412-5427
    • Almeida, P.1    Barbosa, R.2    Zalar, P.3
  • 3
    • 84901925216 scopus 로고    scopus 로고
    • A Gondwanan imprint on global diversity and domestication of wine and cider yeast Saccharomyces uvarum
    • Almeida P, Gonçalves C, Teixeira S et al. A Gondwanan imprint on global diversity and domestication of wine and cider yeast Saccharomyces uvarum. Nat Commun 2014;5:4044.
    • (2014) Nat Commun , vol.5 , pp. 4044
    • Almeida, P.1    Gonçalves, C.2    Teixeira, S.3
  • 5
    • 0023496815 scopus 로고
    • Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics
    • Avise J, Arnold J, Ball R et al. Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics. Annu Rev Ecol Syst 1987;18:489-522.
    • (1987) Annu Rev Ecol Syst , vol.18 , pp. 489-522
    • Avise, J.1    Arnold, J.2    Ball, R.3
  • 6
    • 85007240758 scopus 로고    scopus 로고
    • Evidence of natural hybridization in Brazilian wild lineages of Saccharomyces cerevisiae
    • Barbosa R, Almeida P, Safar SVB et al. Evidence of natural hybridization in Brazilian wild lineages of Saccharomyces cerevisiae. Genome Biol Evol 2016;8:317-29.
    • (2016) Genome Biol Evol , vol.8 , pp. 317-329
    • Barbosa, R.1    Almeida, P.2    Safar, S.V.B.3
  • 7
    • 50049110557 scopus 로고    scopus 로고
    • Twenty years of phylogeography: the state of the field and the challenges for the Southern Hemisphere
    • Beheregaray LB. Twenty years of phylogeography: the state of the field and the challenges for the Southern Hemisphere. Mol Ecol 2008;17:3754-74.
    • (2008) Mol Ecol , vol.17 , pp. 3754-3774
    • Beheregaray, L.B.1
  • 8
    • 84897883016 scopus 로고    scopus 로고
    • A high-definition view of functional genetic variation from natural yeast genomes
    • Bergstrom A, Simpson JT, Salinas F et al. A high-definition view of functional genetic variation from natural yeast genomes. Mol Biol Evol 2014;31:872-88.
    • (2014) Mol Biol Evol , vol.31 , pp. 872-888
    • Bergstrom, A.1    Simpson, J.T.2    Salinas, F.3
  • 9
    • 84908300430 scopus 로고    scopus 로고
    • Niche construction initiates the evolution of mutualistic interactions
    • Buser CC, Newcomb RD, Gaskett AC et al. Niche construction initiates the evolution of mutualistic interactions. Ecol Lett 2014;17:1257-64.
    • (2014) Ecol Lett , vol.17 , pp. 1257-1264
    • Buser, C.C.1    Newcomb, R.D.2    Gaskett, A.C.3
  • 10
    • 84858588614 scopus 로고    scopus 로고
    • Saccharomyces genome database: the genomics resource of budding yeast
    • Cherry JM, Hong EL, Amundsen C et al. Saccharomyces genome database: the genomics resource of budding yeast. Nucleic Acids Res 2011;40:D700-5.
    • (2011) Nucleic Acids Res , vol.40 , pp. D700-D705
    • Cherry, J.M.1    Hong, E.L.2    Amundsen, C.3
  • 11
    • 84890831000 scopus 로고    scopus 로고
    • Genomic sequence diversity and population structure of Saccharomyces cerevisiae assessed by RAD-seq
    • Cromie GA, Hyma KE, Ludlow CL et al. Genomic sequence diversity and population structure of Saccharomyces cerevisiae assessed by RAD-seq. G3 2013;3:2163-71.
    • (2013) G3 , vol.3 , pp. 2163-2171
    • Cromie, G.A.1    Hyma, K.E.2    Ludlow, C.L.3
  • 12
    • 3543051830 scopus 로고    scopus 로고
    • Mauve: multiple alignment of conserved genomic sequence with rearrangements
    • Darling ACE, Mau B, Blattner FR et al. Mauve: multiple alignment of conserved genomic sequence with rearrangements. Genome Res 2004;14:1394-403.
    • (2004) Genome Res , vol.14 , pp. 1394-1403
    • Darling, A.C.E.1    Mau, B.2    Blattner, F.R.3
  • 13
    • 33644845577 scopus 로고    scopus 로고
    • "Everything is everywhere, but, the environment selects;" what did Baas Becking and Beijerinck really say?
    • deWit R, Bouvier T. "Everything is everywhere, but, the environment selects;" what did Baas Becking and Beijerinck really say? Environ Microbiol 2006;8:755-8.
    • (2006) Environ Microbiol , vol.8 , pp. 755-758
    • deWit, R.1    Bouvier, T.2
  • 14
    • 84899491694 scopus 로고    scopus 로고
    • The others: our biased perspective of eukaryotic genomes
    • del Campo J, Sieracki ME, Molestina R et al. The others: our biased perspective of eukaryotic genomes. Trends Ecol Evol 2014;29:252-9.
    • (2014) Trends Ecol Evol , vol.29 , pp. 252-259
    • del Campo, J.1    Sieracki, M.E.2    Molestina, R.3
  • 15
    • 17744394753 scopus 로고    scopus 로고
    • Phylogenomics and the reconstruction of the tree of life
    • Delsuc F, Brinkmann H, Philippe H. Phylogenomics and the reconstruction of the tree of life. Nat Rev Genet 2005;6: 361-75.
    • (2005) Nat Rev Genet , vol.6 , pp. 361-375
    • Delsuc, F.1    Brinkmann, H.2    Philippe, H.3
  • 16
    • 0037043719 scopus 로고    scopus 로고
    • Evolution, consequences and future of plant and animal domestication
    • Diamond J. Evolution, consequences and future of plant and animal domestication. Nature 2002;418: 700-7.
    • (2002) Nature , vol.418 , pp. 700-707
    • Diamond, J.1
  • 17
    • 33344465800 scopus 로고    scopus 로고
    • Relaxed phylogenetics and dating with confidence Penny D, ed
    • Drummond AJ, Ho SYW, Phillips MJ et al. Relaxed phylogenetics and dating with confidence Penny D, ed. PLoS Biol 2006;4:e88.
    • (2006) PLoS Biol , vol.4
    • Drummond, A.J.1    Ho, S.Y.W.2    Phillips, M.J.3
  • 18
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond AJ, Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 2007;7:214-8.
    • (2007) BMC Evol Biol , vol.7 , pp. 214-218
    • Drummond, A.J.1    Rambaut, A.2
  • 19
    • 84882759440 scopus 로고    scopus 로고
    • Structure harvester: a website and program for visualizing structure output and implementing the Evanno method
    • Earl DA, vonHoldt BM. Structure harvester: a website and program for visualizing structure output and implementing the Evanno method. Conserv Genet Resour 2011;4:359-61.
    • (2011) Conserv Genet Resour , vol.4 , pp. 359-361
    • Earl, D.A.1    vonHoldt, B.M.2
  • 20
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software structure: a simulation study
    • Evanno G, Regnaut S, Goudet J. Detecting the number of clusters of individuals using the software structure: a simulation study. Mol Ecol 2005;14:2611-20.
    • (2005) Mol Ecol , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 21
    • 33645096818 scopus 로고    scopus 로고
    • Evidence for domesticated and wild populations of Saccharomyces cerevisiae
    • Fay JC, Benavides JA. Evidence for domesticated and wild populations of Saccharomyces cerevisiae. PLoS Genet 2005;1: 66-71.
    • (2005) PLoS Genet , vol.1 , pp. 66-71
    • Fay, J.C.1    Benavides, J.A.2
  • 22
    • 84862589499 scopus 로고    scopus 로고
    • Geographic delineations of yeast communities and populations associated with vines and wines in New Zealand
    • Gayevskiy V, Goddard MR. Geographic delineations of yeast communities and populations associated with vines and wines in New Zealand. ISME J 2012;6:1281-90.
    • (2012) ISME J , vol.6 , pp. 1281-1290
    • Gayevskiy, V.1    Goddard, M.R.2
  • 23
    • 84953410740 scopus 로고    scopus 로고
    • Saccharomyces eubayanus and Saccharomyces arboricola reside in North Island native New Zealand forests
    • Gayevskiy V, Goddard MR. Saccharomyces eubayanus and Saccharomyces arboricola reside in North Island native New Zealand forests. Environ Microbiol 2016;18:1137-47.
    • (2016) Environ Microbiol , vol.18 , pp. 1137-1147
    • Gayevskiy, V.1    Goddard, M.R.2
  • 24
    • 84897464804 scopus 로고    scopus 로고
    • ObStruct: a method to objectively analyse factors driving population structure using Bayesian ancestry profiles Pajewski NM, ed
    • Gayevskiy V, Klaere S, Knight S et al. ObStruct: a method to objectively analyse factors driving population structure using Bayesian ancestry profiles Pajewski NM, ed. PLoS One 2014;9:e85196.
    • (2014) PLoS One , vol.9
    • Gayevskiy, V.1    Klaere, S.2    Knight, S.3
  • 25
    • 73349121287 scopus 로고    scopus 로고
    • A distinct population of Saccharomyces cerevisiae in New Zealand: evidence for local dispersal by insects and human-aided global dispersal in oak barrels
    • Goddard MR, Anfang N, Tang R et al. A distinct population of Saccharomyces cerevisiae in New Zealand: evidence for local dispersal by insects and human-aided global dispersal in oak barrels. Environ Microbiol 2010;12:63-73.
    • (2010) Environ Microbiol , vol.12 , pp. 63-73
    • Goddard, M.R.1    Anfang, N.2    Tang, R.3
  • 26
    • 84938379544 scopus 로고    scopus 로고
    • Saccharomyces cerevisiae: a nomadic yeast with no niche?
    • Goddard MR, Greig D. Saccharomyces cerevisiae: a nomadic yeast with no niche? FEMS Yeast Res 2015;15:fov009.
    • (2015) FEMS Yeast Res , vol.15
    • Goddard, M.R.1    Greig, D.2
  • 28
    • 84862499239 scopus 로고    scopus 로고
    • Beyond biogeographic patterns: processes shaping themicrobial landscape
    • Hanson CA, Fuhrman JA, Horner-DevineMC et al. Beyond biogeographic patterns: processes shaping themicrobial landscape. Nat Rev Microbiol 2012;10:497-506.
    • (2012) Nat Rev Microbiol , vol.10 , pp. 497-506
    • Hanson, C.A.1    Fuhrman, J.A.2    Horner-Devine, M.C.3
  • 29
    • 84876783002 scopus 로고    scopus 로고
    • Saccharomyces diversity and evolution: a budding model genus
    • Hittinger CT. Saccharomyces diversity and evolution: a budding model genus. Trends Genet 2013;29:309-17.
    • (2013) Trends Genet , vol.29 , pp. 309-317
    • Hittinger, C.T.1
  • 30
    • 84905986718 scopus 로고    scopus 로고
    • MET2 affects production of hydrogen sulfide during wine fermentation
    • Huang C, Roncoroni M, Gardner RC. MET2 affects production of hydrogen sulfide during wine fermentation. Appl Microbiol Biot 2014;98:7125-35.
    • (2014) Appl Microbiol Biot , vol.98 , pp. 7125-7135
    • Huang, C.1    Roncoroni, M.2    Gardner, R.C.3
  • 31
    • 0141456013 scopus 로고    scopus 로고
    • Untangling Oceanic settlement: the edge of the knowable
    • Hurles ME, Matisoo-Smith E, Gray RD. Untangling Oceanic settlement: the edge of the knowable. Trends Ecol Evol 2003;18: 531-40.
    • (2003) Trends Ecol Evol , vol.18 , pp. 531-540
    • Hurles, M.E.1    Matisoo-Smith, E.2    Gray, R.D.3
  • 32
    • 30744470609 scopus 로고    scopus 로고
    • Application of phylogenetic networks in evolutionary studies
    • Huson DH, Bryant D. Application of phylogenetic networks in evolutionary studies. Mol Biol Evol 2006;23:254-67.
    • (2006) Mol Biol Evol , vol.23 , pp. 254-267
    • Huson, D.H.1    Bryant, D.2
  • 33
    • 84863507534 scopus 로고    scopus 로고
    • Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data
    • Kearse M, Moir R, Wilson A et al. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 2012;28:1647-9.
    • (2012) Bioinformatics , vol.28 , pp. 1647-1649
    • Kearse, M.1    Moir, R.2    Wilson, A.3
  • 34
    • 84921544218 scopus 로고    scopus 로고
    • Quantifying separation and similarity in a Saccharomyces cerevisiae metapopulation
    • Knight S, Goddard MR. Quantifying separation and similarity in a Saccharomyces cerevisiae metapopulation. ISME J 2015;9:361-70.
    • (2015) ISME J , vol.9 , pp. 361-370
    • Knight, S.1    Goddard, M.R.2
  • 35
    • 84942134119 scopus 로고    scopus 로고
    • Regional microbial signatures positively correlate with differential wine phenotypes: evidence for a microbial aspect to terroir
    • Knight S, Klaere S, Fedrizzi B et al. Regional microbial signatures positively correlate with differential wine phenotypes: evidence for a microbial aspect to terroir. Sci Rep 2015;5: 14233.
    • (2015) Sci Rep , vol.5 , pp. 14233
    • Knight, S.1    Klaere, S.2    Fedrizzi, B.3
  • 36
    • 40849138236 scopus 로고    scopus 로고
    • Estimating the per-base-pairmutation rate in the yeast Saccharomyces cerevisiae
    • Lang GI, Murray AW. Estimating the per-base-pairmutation rate in the yeast Saccharomyces cerevisiae. Genetics 2008;178:67-82.
    • (2008) Genetics , vol.178 , pp. 67-82
    • Lang, G.I.1    Murray, A.W.2
  • 37
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • Langmead B, Salzberg SL. Fast gapped-read alignment with Bowtie 2. Nat Methods 2012;9:357-9.
    • (2012) Nat Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 39
    • 34248192358 scopus 로고    scopus 로고
    • Bread, beer and wine: Saccharomyces cerevisiae diversity reflects human history
    • Legras J-L, Merdinoglu D, Cornuet J-M et al. Bread, beer and wine: Saccharomyces cerevisiae diversity reflects human history. Mol Ecol 2007;16:2091-102.
    • (2007) Mol Ecol , vol.16 , pp. 2091-2102
    • Legras, J.-L.1    Merdinoglu, D.2    Cornuet, J.-M.3
  • 40
    • 68549104404 scopus 로고    scopus 로고
    • The sequence alignment/map format and SAMtools
    • Li H, Handsaker B, Wysoker A et al. Subgroup 1GPDP. The sequence alignment/map format and SAMtools. Bioinformatics 2009;25:2078-9.
    • (2009) Bioinformatics , vol.25 , pp. 2078-2079
    • Li, H.1    Handsaker, B.2    Wysoker, A.3
  • 41
    • 78649529665 scopus 로고    scopus 로고
    • Invisible invaders: non-pathogenic invasive microbes in aquatic and terrestrial ecosystems
    • Litchman E. Invisible invaders: non-pathogenic invasive microbes in aquatic and terrestrial ecosystems. Ecol Lett 2010;13:1560-72.
    • (2010) Ecol Lett , vol.13 , pp. 1560-1572
    • Litchman, E.1
  • 42
    • 33750437730 scopus 로고    scopus 로고
    • Sequence diversity, reproductive isolation and species concepts in Saccharomyces
    • Liti G, Barton DBH, Louis EJ. Sequence diversity, reproductive isolation and species concepts in Saccharomyces. Genetics 2006;174:839-50.
    • (2006) Genetics , vol.174 , pp. 839-850
    • Liti, G.1    Barton, D.B.H.2    Louis, E.J.3
  • 43
    • 62649089109 scopus 로고    scopus 로고
    • Population genomics of domestic and wild yeasts
    • Liti G, Carter DM, Moses AM et al. Population genomics of domestic and wild yeasts. Nature 2009;458:337-41.
    • (2009) Nature , vol.458 , pp. 337-341
    • Liti, G.1    Carter, D.M.2    Moses, A.M.3
  • 44
    • 84864483625 scopus 로고    scopus 로고
    • RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics
    • Lohse M, Bolger AM, Nagel A et al. RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. Nucleic Acids Res 2012;40:W622-7.
    • (2012) Nucleic Acids Res , vol.40 , pp. W622-W627
    • Lohse, M.1    Bolger, A.M.2    Nagel, A.3
  • 45
    • 84962191016 scopus 로고    scopus 로고
    • Independent origins of yeast associated with coffee and cacao fermentation
    • Ludlow CL, Cromie GA, Garmendia-Torres C et al. Independent origins of yeast associated with coffee and cacao fermentation. Curr Biol 2016;26:965-71.
    • (2016) Curr Biol , vol.26 , pp. 965-971
    • Ludlow, C.L.1    Cromie, G.A.2    Garmendia-Torres, C.3
  • 46
    • 19944403184 scopus 로고    scopus 로고
    • Fermented beverages of pre-and proto-historic China
    • McGovern PE, Zhang J, Tang J et al. Fermented beverages of pre-and proto-historic China. P Natl Acad Sci USA 2004;101: 17593-8.
    • (2004) P Natl Acad Sci USA , vol.101 , pp. 17593-17598
    • McGovern, P.E.1    Zhang, J.2    Tang, J.3
  • 48
    • 79952129813 scopus 로고    scopus 로고
    • Outcrossing, mitotic recombination, and life-history trade-offs shape genome evolution in Saccharomyces cerevisiae
    • Magwene PM, Kayikci O, Granek JA et al. Outcrossing, mitotic recombination, and life-history trade-offs shape genome evolution in Saccharomyces cerevisiae. P Natl Acad Sci USA 2011;108:1987-92.
    • (2011) P Natl Acad Sci USA , vol.108 , pp. 1987-1992
    • Magwene, P.M.1    Kayikci, O.2    Granek, J.A.3
  • 49
  • 50
    • 84860776735 scopus 로고    scopus 로고
    • Pseudomonas syringae pv. actinidiae (PSA) isolates from recent bacterial canker of kiwifruit outbreaks belong to the same genetic lineage
    • Mazzaglia A, Studholme DJ, Taratufolo MC et al. Pseudomonas syringae pv. actinidiae (PSA) isolates from recent bacterial canker of kiwifruit outbreaks belong to the same genetic lineage. PLoS One 2012;7:e36518.
    • (2012) PLoS One , vol.7
    • Mazzaglia, A.1    Studholme, D.J.2    Taratufolo, M.C.3
  • 51
    • 84939567156 scopus 로고    scopus 로고
    • Quantifying the relative roles of selective and neutral processes in defining eukaryotic microbial communities
    • Morrison-Whittle P, Goddard MR. Quantifying the relative roles of selective and neutral processes in defining eukaryotic microbial communities. ISME J 2015;9:1-9.
    • (2015) ISME J , vol.9 , pp. 1-9
    • Morrison-Whittle, P.1    Goddard, M.R.2
  • 52
    • 84864273210 scopus 로고    scopus 로고
    • SNP calling, genotype calling, and sample allele frequency estimation from new-generation sequencing data
    • Nielsen R, Korneliussen T, Albrechtsen A et al. SNP calling, genotype calling, and sample allele frequency estimation from new-generation sequencing data. PLoS One 2012;7: e37558.
    • (2012) PLoS One , vol.7
    • Nielsen, R.1    Korneliussen, T.2    Albrechtsen, A.3
  • 53
    • 68149096825 scopus 로고    scopus 로고
    • Species invasions and the limits to restoration: learning from the New Zealand experience
    • Norton D. Species invasions and the limits to restoration: learning from the New Zealand experience. Science 2009;325: 569-71.
    • (2009) Science , vol.325 , pp. 569-571
    • Norton, D.1
  • 54
    • 70349515584 scopus 로고    scopus 로고
    • Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118
    • Novo M, Bigey F, Beyne E et al. Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118. P Natl Acad Sci USA 2009;106:16333-8.
    • (2009) P Natl Acad Sci USA , vol.106 , pp. 16333-16338
    • Novo, M.1    Bigey, F.2    Beyne, E.3
  • 55
    • 33744745905 scopus 로고    scopus 로고
    • Marine microbial diversity: can it be determined?
    • Pedrós-Alió C. Marine microbial diversity: can it be determined? Trends Microbiol 2006;14:257-63.
    • (2006) Trends Microbiol , vol.14 , pp. 257-263
    • Pedrós-Alió, C.1
  • 56
    • 84959509476 scopus 로고    scopus 로고
    • Population genomics of yeasts: towards a comprehensive view across a broad evolutionary scale
    • Peter J, Schacherer J. Population genomics of yeasts: towards a comprehensive view across a broad evolutionary scale. Yeast 2016;33:73-81.
    • (2016) Yeast , vol.33 , pp. 73-81
    • Peter, J.1    Schacherer, J.2
  • 57
    • 33645862582 scopus 로고    scopus 로고
    • How did Saccharomyces evolve to become a good brewer?
    • Piskur J, Rozpedowska E, Polakova S et al. How did Saccharomyces evolve to become a good brewer? Trends Genet 2006;22:183-6.
    • (2006) Trends Genet , vol.22 , pp. 183-186
    • Piskur, J.1    Rozpedowska, E.2    Polakova, S.3
  • 58
    • 0034659738 scopus 로고    scopus 로고
    • Tailoring wine yeast for the new millennium: novel approaches to the ancient art of winemaking
    • Pretorius IS. Tailoring wine yeast for the new millennium: novel approaches to the ancient art of winemaking. Yeast 2000;16:675-729.
    • (2000) Yeast , vol.16 , pp. 675-729
    • Pretorius, I.S.1
  • 59
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P. Inference of population structure using multilocus genotype data. Genetics 2000;155:945-59.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 60
    • 79961135005 scopus 로고    scopus 로고
    • Vienna, Austria: R Foundation for Statistical Computing (15 October 2016, date last accessed)
    • R Development Core Team. R: A Language and Environment for Statistical Computing. Vienna, Austria: R Foundation for Statistical Computing. 2011. http://www.R-project.org/(15 October 2016, date last accessed).
    • (2011) R: A Language and Environment for Statistical Computing
  • 61
    • 69249213727 scopus 로고    scopus 로고
    • A database of microsatellite genotypes for Saccharomyces cerevisiae
    • Richards KD, Goddard MR, Gardner RC. A database of microsatellite genotypes for Saccharomyces cerevisiae. Anton Leeuw 2009;96:355-9.
    • (2009) Anton Leeuw , vol.96 , pp. 355-359
    • Richards, K.D.1    Goddard, M.R.2    Gardner, R.C.3
  • 62
    • 0242365676 scopus 로고    scopus 로고
    • Genome-scale approaches to resolving incongruence in molecular phylogenies
    • Rokas A, Williams BL, King N et al. Genome-scale approaches to resolving incongruence in molecular phylogenies. Nature 2003;425:798-804.
    • (2003) Nature , vol.425 , pp. 798-804
    • Rokas, A.1    Williams, B.L.2    King, N.3
  • 63
    • 84883006832 scopus 로고    scopus 로고
    • The awesome power of yeast evolutionary genetics: new genome sequences and strain resources for the Saccharomyces sensu stricto genus
    • Scannell DR, Zill OA, Rokas A et al. The awesome power of yeast evolutionary genetics: new genome sequences and strain resources for the Saccharomyces sensu stricto genus. G3 2011;1:11-25.
    • (2011) G3 , vol.1 , pp. 11-25
    • Scannell, D.R.1    Zill, O.A.2    Rokas, A.3
  • 64
    • 62649126517 scopus 로고    scopus 로고
    • Comprehensive polymorphism survey elucidates population structure of Saccharomyces cerevisiae
    • Schacherer J, Shapiro JA, RuderferDM, et al. Comprehensive polymorphism survey elucidates population structure of Saccharomyces cerevisiae. Nature 2009;458:342-5.
    • (2009) Nature , vol.458 , pp. 342-345
    • Schacherer, J.1    Shapiro, J.A.2    Ruderfer, D.M.3
  • 65
    • 58149166560 scopus 로고    scopus 로고
    • Yeasts associated with the New Zealand Nothofagus honeydew system
    • Serjeant K, Tang R, Anfang N et al. Yeasts associated with the New Zealand Nothofagus honeydew system. New Zeal J Ecol 2008;32:209-13.
    • (2008) New Zeal J Ecol , vol.32 , pp. 209-213
    • Serjeant, K.1    Tang, R.2    Anfang, N.3
  • 66
    • 84883698933 scopus 로고    scopus 로고
    • Integrative phenomics reveals insight into the structure of phenotypic diversity in budding yeast
    • Skelly DA, Merrihew GE, Riffle M et al. Integrative phenomics reveals insight into the structure of phenotypic diversity in budding yeast. Genome Res 2013;23:1496-504.
    • (2013) Genome Res , vol.23 , pp. 1496-1504
    • Skelly, D.A.1    Merrihew, G.E.2    Riffle, M.3
  • 67
    • 84865186974 scopus 로고    scopus 로고
    • Role of social wasps in Saccharomyces cerevisiae ecology and evolution
    • Stefanini I, Dapporto L, Legras J-L et al. Role of social wasps in Saccharomyces cerevisiae ecology and evolution. P Nat Acad Sci USA 2012;109:13398-403.
    • (2012) P Nat Acad Sci USA , vol.109 , pp. 13398-13403
    • Stefanini, I.1    Dapporto, L.2    Legras, J.-L.3
  • 68
    • 84929658508 scopus 로고    scopus 로고
    • The 100-genomes strains, an S. cerevisiae resource that illuminates its natural phenotypic and genotypic variation and emergence as an opportunistic pathogen
    • Strope PK, Skelly DA, Kozmin SG et al. The 100-genomes strains, an S. cerevisiae resource that illuminates its natural phenotypic and genotypic variation and emergence as an opportunistic pathogen. Genome Res 2015;25:762-74.
    • (2015) Genome Res , vol.25 , pp. 762-774
    • Strope, P.K.1    Skelly, D.A.2    Kozmin, S.G.3
  • 69
    • 0024313579 scopus 로고
    • Statistical method for testing the neutralmutation hypothesis by DNA polymorphism
    • Tajima F. Statistical method for testing the neutralmutation hypothesis by DNA polymorphism. Genetics 1989;123:585-95.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 70
    • 84899657886 scopus 로고    scopus 로고
    • Endemism and functional convergence across the North American soil mycobiome
    • Talbot JM, Bruns TD, Taylor JW et al. Endemism and functional convergence across the North American soil mycobiome. P Natl Acad Sci USA 2014;111:6341-6.
    • (2014) P Natl Acad Sci USA , vol.111 , pp. 6341-6346
    • Talbot, J.M.1    Bruns, T.D.2    Taylor, J.W.3
  • 71
    • 84906944993 scopus 로고    scopus 로고
    • Pyrosequencing reveals regional differences in fruit-associated fungal communities
    • Taylor MW, Tsai P, Anfang N et al. Pyrosequencing reveals regional differences in fruit-associated fungal communities. Environ Microbiol 2014;16:2848-58.
    • (2014) Environ Microbiol , vol.16 , pp. 2848-2858
    • Taylor, M.W.1    Tsai, P.2    Anfang, N.3
  • 72
    • 33747209106 scopus 로고    scopus 로고
    • Historical origins and genetic diversity of wine grapes
    • This P, Lacombe T, Thomas MR. Historical origins and genetic diversity of wine grapes. Trends Genet 2006;22:511-9.
    • (2006) Trends Genet , vol.22 , pp. 511-519
    • This, P.1    Lacombe, T.2    Thomas, M.R.3
  • 73
    • 84904572568 scopus 로고    scopus 로고
    • Spatial scaling effects on soil bacterial communities in Malaysian tropical forests
    • Tripathi BM, Lee-Cruz L, Kim M et al. Spatial scaling effects on soil bacterial communities in Malaysian tropical forests. Microb Ecol 2014;68:247-58.
    • (2014) Microb Ecol , vol.68 , pp. 247-258
    • Tripathi, B.M.1    Lee-Cruz, L.2    Kim, M.3
  • 74
    • 84863209808 scopus 로고    scopus 로고
    • Biogeography of bacterial communities in hot springs: a focus on the actinobacteria
    • Valverde A, Tuffin M, Cowan DA. Biogeography of bacterial communities in hot springs: a focus on the actinobacteria. Extremophiles 2012;16:669-79.
    • (2012) Extremophiles , vol.16 , pp. 669-679
    • Valverde, A.1    Tuffin, M.2    Cowan, D.A.3
  • 75
    • 69149091419 scopus 로고    scopus 로고
    • New Zealand phylogeography: evolution on a small continent
    • Wallis GP, Trewick SA. New Zealand phylogeography: evolution on a small continent. Mol Ecol 2009;18:3548-80.
    • (2009) Mol Ecol , vol.18 , pp. 3548-3580
    • Wallis, G.P.1    Trewick, S.A.2
  • 76
    • 84868206362 scopus 로고    scopus 로고
    • Surprisingly diverged populations of Saccharomyces cerevisiae in natural environments remote from human activity
    • Wang Q-M, Liu W-Q, Liti G et al. Surprisingly diverged populations of Saccharomyces cerevisiae in natural environments remote from human activity. Mol Ecol 2012;21: 5404-17.
    • (2012) Mol Ecol , vol.21 , pp. 5404-5417
    • Wang, Q.-M.1    Liu, W.-Q.2    Liti, G.3
  • 77
    • 0016491430 scopus 로고
    • On the number of segregating sites in genetical models without recombination
    • Watterson GA. On the number of segregating sites in genetical models without recombination. Theor Popul Biol 1975;7: 256-76.
    • (1975) Theor Popul Biol , vol.7 , pp. 256-276
    • Watterson, G.A.1
  • 79
    • 78650495644 scopus 로고    scopus 로고
    • Saccharomyces paradoxus and Saccharomyces cerevisiae reside on oak trees in New Zealand: evidence for migration from Europe and interspecies hybrids
    • Zhang H, Skelton A, Gardner RC et al. Saccharomyces paradoxus and Saccharomyces cerevisiae reside on oak trees in New Zealand: evidence for migration from Europe and interspecies hybrids. FEMS Yeast Res 2010;10:941-7.
    • (2010) FEMS Yeast Res , vol.10 , pp. 941-947
    • Zhang, H.1    Skelton, A.2    Gardner, R.C.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.