Continuous motion scan ptychography: Characterization for increased speed in coherent x-ray imaging

Optics Express

Volumn 23, Issue 5, 2015, Pages 5438-5451

  Deng, Junjing ^a   Nashed, Youssef S G ^b   Chen, Si ^c   Phillips, Nicholas W ^d,e   Peterka, Tom ^b   Ross, Rob ^b   Vogt, Stefan ^c   Jacobsen, Chris ^a,c   Vine, David J ^c  

^a NORTHWESTERN UNIVERSITY   (United States)

^b ARGONNE NATIONAL LABORATORY   (United States)

^c ARGONNE NATIONAL LABORATORY   (United States)

^d LA TROBE UNIVERSITY   (Australia)

^e CSIRO   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

DATA ACQUISITION; DIFFRACTION PATTERNS; DIGITAL STORAGE; INTERFEROMETRY; MOTION ANALYSIS; PROBES; X RAY ANALYSIS; X RAY OPTICS;

COHERENT DIFFRACTION IMAGING; COHERENT ILLUMINATION; CONTINUOUS MOTIONS; DIFFRACTION LIMITED STORAGE RINGS; RECONSTRUCTION METHOD; SCATTERING STRENGTH; SPATIAL RESOLUTION; TRANSMISSION FUNCTION;

DIFFRACTION;

ANIMAL; COMPUTER SIMULATION; MOTION; THREE DIMENSIONAL IMAGING; X RAY;

ANIMALS; COMPUTER SIMULATION; IMAGING, THREE-DIMENSIONAL; MOTION; X-RAYS;

EID: 84981350554     PISSN: None     EISSN: 10944087     Source Type: Journal    
DOI: 10.1364/OE.23.005438     Document Type: Article

References (36)

1. W. Hoppe, "Diffraction in inhomogeneous primary wave fields. 1. principle of phase determination from electron diffraction interference, " Acta Crystallogr. A 25, 495-501 (1969).
2. O. Bunk, M. Dierolf, S. Kynde, I. Johnson, O. Marti, and F. Pfeiffer, "Influence of the overlap parameter on the convergence of the ptychographical iterative engine, " Ultramicroscopy 108, 481-487 (2008).
3. H. M. L. Faulkner and J. Rodenburg, "Movable aperture lensless transmission microscopy: A novel phase retrieval algorithm, " Phys. Rev. Lett. 93, 023903 (2004).
4. J. Rodenburg, A. Hurst, A. Cullis, B. Dobson, F. Pfeiffer, O. Bunk, C. David, K. Jefimovs, and I. Johnson, "Hard-x-ray lensless imaging of extended objects, " Phys. Rev. Lett. 98, 034801 (2007).
5. P. Thibault, M. Dierolf, A. Menzel, O. Bunk, C. David, and F. Pfeiffer, "High-resolution scanning x-ray diffraction microscopy, " Science 321, 379-382 (2008).
6. A. Schropp and C. G. Schroer, "Dose requirements for resolving a given feature in an object by coherent x-ray diffraction imaging, " New J. Phys. 12, 035016 (2010).
7. P. Thibault, M. Dierolf, O. Bunk, A. Menzel, and F. Pfeiffer, "Probe retrieval in ptychographic coherent diffractive imaging, " Ultramicroscopy 109, 338-343 (2009).
8. C. M. Kewish, P. Thibault, M. Dierolf, O. Bunk, A. Menzel, J. Vila-Comamala, K. Jefimovs, and F. Pfeiffer, "Ptychographic characterization of the wavefield in the focus of reflective hard x-ray optics, " Ultramicroscopy 110, 325-329 (2010).
9. A. Schropp, P. Boye, J. M. Feldkamp, R. Hoppe, J. Patommel, D. Samberg, S. Stephan, K. Giewekemeyer, R. N. Wilke, T. Salditt, J. Gulden, A. P. Mancuso, I. A. Vartanyants, E. Weckert, S. Schöder, M. Burghammer, and C. G. Schroer, "Hard x-ray nanobeam characterization by coherent diffraction microscopy, " Appl. Phys. Lett. 96, 091102 (2010).
10. G. Zheng, R. Horstmeyer, and C. Yang, "Wide-field, high-resolution Fourier ptychographic microscopy, " Nature Photon. 7, 739-745 (2013).
11. J. Vila-Comamala, A. Diaz, M. Guizar-Sicairos, A. Mantion, C. M. Kewish, A. Menzel, O. Bunk, and C. David, "Characterization of high-resolution diffractive X-ray optics by ptychographic coherent diffractive imaging, " Opt. Express 19, 21333-21344 (2011).
12. Y. Takahashi, A. Suzuki, N. Zettsu, Y. Kohmura, Y. Senba, H. Ohashi, K. Yamauchi, and T. Ishikawa, "Towards high-resolution ptychographic x-ray diffraction microscopy, " Phys. Rev. B 83, 214109 (2011).
13. D. A. Shapiro, Y.-S. Yu, T. T. andJordi Cabana, R. Celestre, W. Chao, K. Kaznatcheev, A. L. D. Kilcoyne, F. M. andStefano Marchesini, Y. S. Meng, T. Warwick, L. L. Yang, and H. A. Padmore, "Chemical composition mapping with nanometre resolution by soft X-ray microscopy, " Nature Photon. 8, 765-769 (2014).
14. D. J. Vine, D. Pelliccia, C. Holzner, S. Baines, A. Berry, I. McNulty, S. Vogt, A. G. Peele, and K. Nugent, "Simultaneous x-ray fluorescence and ptychographic microscopy of Cyclotella meneghiniana, " Opt. Express 20, 18287-18296 (2012).
15. R. N.Wilke, M. Priebe, M. Bartels, K. Giewekemeyer, A. Diaz, P. Karvinen, and T. Salditt, "Hard X-ray imaging of bacterial cells: nano-diffraction and ptychographic reconstruction, " Opt. Express 20, 19232-19254 (2012).
16. P. Thibault, M. Dierolf, C. M. Kewish, A. Menzel, O. Bunk, and F. Pfeiffer, "Contrast mechanisms in scanning transmission x-ray microscopy, " Phys. Rev. A 80, 043813 (2009).
17. A. Diaz, P. Trtik, M. Guizar-Sicairos, A. Menzel, P. Thibault, and O. Bunk, "Quantitative x-ray phase nanotomography, " Phys. Rev. B 85, 020104 (2012).
18. M. Dierolf, A. Menzel, P. Thibault, P. Schneider, C. Kewish, R. Wepf, O. Bunk, and F. Pfeiffer, "Ptychographic x-ray computed tomography at the nanoscale, " Nature 467, 436-439 (2010).
19. M. Holler, A. Diaz, M. Guizar-Sicairos, P. Karvinen, E. Färm, E. Härkönen, M. Ritala, A. Menzel, J. Raabe, and O. Bunk, "X-ray ptychographic computed tomography at 16 nm isotropic 3D resolution, " Sci. Rep. 4, 3857 (2014).
20. M. Bech, O. Bunk, C. David, P. Kraft, C. Brönnimann, E. Eikenberry, and F. Pfeiffer, "X-ray imaging with the PILATUS 100k detector, " Appl. Radiat. Isot. 66, 474-478 (2008).
21. R. Dinapoli, A. Bergamaschi, B. Henrich, R. Horisberger, I. Johnson, A. Mozzanica, E. Schmid, B. Schmitt, A. Schreiber, X. Shi, and G. Theidel, "Eiger: Next generation single photon counting detector for x-ray application, " Nucl. Instr. Meth. Phys. Res. A 650, 79-83 (2011).
22. M. Guizar-Sicairos, I. Johnson, A. Diaz, M. Holler, P. Karvinen, H. C. Stadler, R. Dinapoli, O. Bunk, and A. Menze, "High-throughput ptychography using Eiger: scanning X-ray nano-imaging of extended regions, " Opt. Express 22, 14859-14870 (2014).
23. M. Eriksson, J. F. van der Veen, and C. Quitmann, "Diffraction-limited storage rings-a window to the science of tomorrow, " J. Synchrotron Rad. 21, 837-842 (2014).
24. J. N. Clark, X. Huang, R. J. Harder, and I. K. Robinson, "Continuous scanning mode for ptychography, " Opt. Lett. 39, 6066-6069 (2014).
25. P. M. Pelz, M. Guizar-Sicairos, P. Thibault, I. Johnson, M. Holler, and A. Menzel, "On-the-fly scans for x-ray ptychography, " Appl. Phys. Lett. 105, 251101 (2014).
26. J. Z. Young and F. Roberts, "A flying-spot microscope, " Nature 167, 231 (1951).
27. E. Lombi, M. D. Jonge, E. Donner, C. G. Ryan, and D. Paterson, "Trends in hard x-ray fluorescence mapping: environmental applications in the age of fast detectors, " Anal. Bioanal. Chem. 400, 1637-1644 (2011).
28. P. Thibault and A. Menzel, "Reconstructing state mixtures from diffraction measurements, " Nature 494, 68-74 (2013).
29. L. Mandel and E. Wolf, Optical Coherence and Quantum Optics (Cambridge University, 1995).
30. S. Flewett, H. M. Quiney, C. Q. Tran, and K. A. Nugent, "Extracting coherent modes from partially coherent wavefields, " Opt. Lett. 34, 2198-2200 (2009).
31. J. Clark, X. Huang, R. Harder, and I. Robinson, "Dynamic imaging using ptychography, " Phys. Rev. Lett. 112, 113901 (2014).
32. I. Inoue, Y. Shinohara, A. Watanabe, and Y. Amemiya, "Effect of shot noise on x-ray speckle visibility spectroscopy, " Opt. Express 20, 26878-26887 (2012).
33. A. Maiden and J. Rodenburg, "An improved ptychographical phase retrieval algorithm for diffractive imaging, " Ultramicroscopy 109, 1256-1262 (2009).
34. S. G. Podorov, K. M. Pavlov, and D. M. Paganin, "A non-iterative reconstruction method for direct and unambiguous coherent diffractive imaging, " Opt. Express 15, 9954-9962 (2007).
35. Y. Nashed, D. Vine, T. Peterka, J. Deng, R. Ross, and C. Jacobsen, "Parallel ptychographic reconstruction, " Opt. Express 22, 32082-32097 (2014).
36. S. Chen, J. Deng, Y. Yuan, C. Flachenecker, R. Mak, B. Hornberger, Q. Jin, D. Shu, B. Lai, J. Maser, C. Roehrig, T. Paunesku, S. Gleber, D. Vine, L. Finney, J. Von Osinski, M. Bolbat, I. Spink, Z. Chen, J. Steele, D. Trapp, J. Irwin, M. Feser, E. Snyder, K. Brister, C. Jacobsen, G.Woloschak, and S. Vogt, "The Bionanoprobe: hard x-ray fluorescence nanoprobe with cryogenic capabilities, " J. Synchrotron Rad. 21, 66-75 (2014).